View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3342_high_82 (Length: 243)
Name: NF3342_high_82
Description: NF3342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3342_high_82 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 19924223 - 19924448
Alignment:
| Q |
1 |
gacatgtacaataagttgaagggttactcgtggaggagaatggttataaaggtaaagagattttatataataataactttctttgataaataaaaagtgt |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19924223 |
gacatgtacaataagttgaagggt-actcgtggaggagaatggttatgtaggtgaagagattttatataataataactttctttgataaataaaaagtgt |
19924321 |
T |
|
| Q |
101 |
aatatatgaggtgcgtttcaaaattcaccaaaactcaaggaagcatcaaagtttagagagcgtttatcgattatttgtcaacatggtcttgtcaaaattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19924322 |
aatatatgaggtgcgtttcaaaattcaccaaaact-aaggaagcatcaaagtttagagagcgtttatcgattatttgtcaacatggtcttgtcaaaattc |
19924420 |
T |
|
| Q |
201 |
accatatcccatgtttatagtacaattt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
19924421 |
accatatcccatgtttatagtacaattt |
19924448 |
T |
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