View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3342_high_89 (Length: 241)

Name: NF3342_high_89
Description: NF3342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3342_high_89
NF3342_high_89
[»] chr1 (50 HSPs)
chr1 (20-115)||(7420724-7420819)
chr1 (55-109)||(51436352-51436406)
chr1 (22-115)||(18610860-18610952)
chr1 (52-109)||(37741870-37741927)
chr1 (49-110)||(50777338-50777399)
chr1 (44-113)||(19920852-19920923)
chr1 (52-120)||(29094666-29094734)
chr1 (52-120)||(6396410-6396480)
chr1 (44-99)||(27895671-27895726)
chr1 (57-120)||(43757671-43757734)
chr1 (81-124)||(48390026-48390069)
chr1 (43-110)||(50035447-50035514)
chr1 (52-110)||(644791-644849)
chr1 (52-110)||(2827628-2827686)
chr1 (52-110)||(27787584-27787642)
chr1 (52-110)||(46903565-46903623)
chr1 (63-125)||(29362621-29362685)
chr1 (43-103)||(25130805-25130865)
chr1 (63-128)||(25302574-25302641)
chr1 (43-120)||(25995543-25995622)
chr1 (50-110)||(41558088-41558148)
chr1 (63-114)||(3607963-3608014)
chr1 (52-120)||(13813641-13813711)
chr1 (78-125)||(23472186-23472233)
chr1 (43-110)||(29489268-29489335)
chr1 (52-120)||(37947138-37947208)
chr1 (47-110)||(39669901-39669964)
chr1 (21-110)||(48028621-48028709)
chr1 (52-114)||(3919389-3919451)
chr1 (52-106)||(21446136-21446190)
chr1 (52-110)||(24158745-24158803)
chr1 (76-110)||(32873436-32873470)
chr1 (52-110)||(34941838-34941896)
chr1 (49-120)||(36669285-36669358)
chr1 (76-110)||(42829250-42829284)
chr1 (63-118)||(42843273-42843330)
chr1 (52-110)||(43105200-43105258)
chr1 (52-110)||(51168686-51168744)
chr1 (49-110)||(6829700-6829761)
chr1 (49-110)||(7371863-7371924)
chr1 (76-113)||(25239179-25239216)
chr1 (49-110)||(26501390-26501451)
chr1 (63-120)||(36930685-36930742)
chr1 (25-114)||(37619984-37620073)
chr1 (25-109)||(9882555-9882639)
chr1 (76-120)||(19651493-19651537)
chr1 (51-120)||(39010897-39010968)
chr1 (58-114)||(40052997-40053053)
chr1 (43-120)||(43195998-43196077)
chr1 (19-71)||(50775179-50775231)
[»] chr8 (48 HSPs)
chr8 (20-108)||(33511698-33511786)
chr8 (44-120)||(34970290-34970366)
chr8 (43-110)||(6825186-6825253)
chr8 (73-120)||(8428957-8429004)
chr8 (22-120)||(8142903-8143000)
chr8 (20-110)||(36675420-36675510)
chr8 (52-110)||(42651015-42651073)
chr8 (50-114)||(8074641-8074705)
chr8 (67-120)||(40211680-40211735)
chr8 (44-120)||(30927841-30927919)
chr8 (49-120)||(2597075-2597148)
chr8 (44-114)||(4265534-4265604)
chr8 (49-114)||(7900380-7900446)
chr8 (52-110)||(21273628-21273686)
chr8 (51-113)||(24503009-24503071)
chr8 (20-110)||(43605555-43605645)
chr8 (52-110)||(45405753-45405811)
chr8 (54-120)||(3394622-3394690)
chr8 (22-114)||(7678823-7678914)
chr8 (50-110)||(20994974-20995034)
chr8 (51-128)||(22767205-22767284)
chr8 (63-124)||(28772384-28772447)
chr8 (76-125)||(36497739-36497790)
chr8 (19-120)||(43587724-43587827)
chr8 (51-110)||(154385-154444)
chr8 (47-106)||(22999464-22999523)
chr8 (63-110)||(32185595-32185642)
chr8 (44-110)||(5924905-5924971)
chr8 (44-110)||(5925150-5925216)
chr8 (44-114)||(6105345-6105415)
chr8 (49-120)||(13884399-13884472)
chr8 (52-114)||(13924100-13924162)
chr8 (49-120)||(19723121-19723194)
chr8 (21-103)||(23265240-23265322)
chr8 (52-110)||(25430741-25430799)
chr8 (79-113)||(35701788-35701822)
chr8 (49-120)||(41273598-41273671)
chr8 (54-103)||(14233564-14233613)
chr8 (21-114)||(33944850-33944943)
chr8 (49-110)||(41293637-41293697)
chr8 (76-125)||(5359416-5359467)
chr8 (58-110)||(5742581-5742633)
chr8 (49-118)||(11138981-11139052)
chr8 (52-120)||(21649088-21649156)
chr8 (50-110)||(29910128-29910188)
chr8 (66-110)||(33635670-33635714)
chr8 (51-120)||(34247857-34247928)
chr8 (44-104)||(43602333-43602393)
[»] chr7 (42 HSPs)
chr7 (23-110)||(32315921-32316008)
chr7 (44-114)||(26041401-26041471)
chr7 (53-110)||(47379655-47379712)
chr7 (58-110)||(28548159-28548211)
chr7 (44-120)||(39369385-39369463)
chr7 (63-130)||(2005802-2005871)
chr7 (52-113)||(384643-384704)
chr7 (49-118)||(37385148-37385219)
chr7 (57-108)||(42118620-42118671)
chr7 (26-112)||(7458172-7458258)
chr7 (44-110)||(33050278-33050344)
chr7 (52-110)||(37970028-37970086)
chr7 (49-120)||(42431806-42431879)
chr7 (52-110)||(44185271-44185329)
chr7 (25-106)||(31467703-31467784)
chr7 (64-130)||(35212887-35212955)
chr7 (49-110)||(35590710-35590771)
chr7 (57-122)||(48383243-48383308)
chr7 (58-110)||(11070323-11070375)
chr7 (51-120)||(12102626-12102697)
chr7 (49-118)||(25614736-25614807)
chr7 (51-110)||(7295562-7295621)
chr7 (44-120)||(32044863-32044941)
chr7 (51-110)||(37149392-37149451)
chr7 (43-114)||(42060748-42060819)
chr7 (43-114)||(47530200-47530271)
chr7 (44-110)||(2323388-2323454)
chr7 (52-110)||(2600452-2600510)
chr7 (44-110)||(7410495-7410560)
chr7 (44-114)||(17157224-17157294)
chr7 (52-110)||(23034231-23034289)
chr7 (49-103)||(27164752-27164806)
chr7 (52-110)||(27704530-27704588)
chr7 (49-120)||(30864332-30864405)
chr7 (49-120)||(38978575-38978648)
chr7 (44-114)||(44511230-44511300)
chr7 (58-130)||(640463-640539)
chr7 (49-110)||(10014870-10014931)
chr7 (76-125)||(18925941-18925990)
chr7 (57-118)||(43550960-43551021)
chr7 (76-120)||(21588869-21588913)
chr7 (43-103)||(48057406-48057466)
[»] chr3 (60 HSPs)
chr3 (43-110)||(35756075-35756142)
chr3 (49-110)||(34021378-34021439)
chr3 (44-120)||(28263628-28263706)
chr3 (19-110)||(44910799-44910890)
chr3 (52-110)||(16295559-16295617)
chr3 (44-110)||(43900867-43900933)
chr3 (49-120)||(54233416-54233489)
chr3 (22-115)||(50621953-50622046)
chr3 (52-112)||(29533854-29533914)
chr3 (22-110)||(34208362-34208450)
chr3 (76-120)||(2482616-2482662)
chr3 (58-109)||(38471738-38471789)
chr3 (63-114)||(38692255-38692306)
chr3 (44-120)||(44855334-44855412)
chr3 (49-125)||(50879673-50879751)
chr3 (44-120)||(52454002-52454080)
chr3 (52-114)||(5188327-5188389)
chr3 (76-114)||(7039173-7039211)
chr3 (44-110)||(11327203-11327269)
chr3 (49-120)||(13159744-13159817)
chr3 (52-110)||(49886758-49886816)
chr3 (52-110)||(50025603-50025661)
chr3 (49-110)||(36819051-36819112)
chr3 (21-110)||(47683885-47683974)
chr3 (49-114)||(53102817-53102882)
chr3 (52-108)||(1031345-1031401)
chr3 (52-108)||(21481861-21481917)
chr3 (76-120)||(29525316-29525360)
chr3 (50-110)||(43460483-43460543)
chr3 (19-110)||(9027708-9027799)
chr3 (52-120)||(33971966-33972036)
chr3 (44-120)||(41877771-41877849)
chr3 (52-120)||(44127110-44127180)
chr3 (63-114)||(48178984-48179035)
chr3 (52-128)||(49361755-49361833)
chr3 (63-114)||(54379397-54379448)
chr3 (52-102)||(9557850-9557900)
chr3 (52-110)||(25559799-25559857)
chr3 (44-114)||(27162377-27162447)
chr3 (49-120)||(30400071-30400144)
chr3 (79-125)||(30664581-30664627)
chr3 (79-109)||(32151989-32152019)
chr3 (52-110)||(32931836-32931894)
chr3 (52-110)||(43149261-43149319)
chr3 (57-115)||(55264907-55264965)
chr3 (49-110)||(23906902-23906963)
chr3 (63-120)||(1261304-1261363)
chr3 (58-110)||(2280272-2280324)
chr3 (63-120)||(7949871-7949930)
chr3 (63-103)||(9582088-9582128)
chr3 (78-114)||(12094334-12094370)
chr3 (50-106)||(12762859-12762915)
chr3 (63-120)||(20714326-20714385)
chr3 (51-120)||(28269889-28269960)
chr3 (63-120)||(30633743-30633802)
chr3 (22-110)||(31300897-31300985)
chr3 (66-106)||(36301140-36301180)
chr3 (51-120)||(37215148-37215219)
chr3 (76-108)||(38017862-38017894)
chr3 (80-108)||(46323061-46323089)
[»] chr2 (51 HSPs)
chr2 (19-114)||(33722043-33722138)
chr2 (52-110)||(35518370-35518428)
chr2 (27-114)||(20533956-20534043)
chr2 (52-120)||(24491595-24491665)
chr2 (43-110)||(29871264-29871331)
chr2 (43-110)||(33857312-33857379)
chr2 (44-120)||(44484566-44484644)
chr2 (44-110)||(4432422-4432488)
chr2 (52-110)||(43026031-43026089)
chr2 (49-110)||(27307160-27307221)
chr2 (43-120)||(3299014-3299093)
chr2 (63-120)||(19631471-19631530)
chr2 (63-120)||(19828372-19828431)
chr2 (58-114)||(34373099-34373155)
chr2 (63-120)||(36909772-36909831)
chr2 (76-120)||(37109314-37109358)
chr2 (22-108)||(14957689-14957776)
chr2 (55-114)||(25997651-25997710)
chr2 (50-125)||(32755758-32755833)
chr2 (21-79)||(9458521-9458579)
chr2 (52-114)||(16463383-16463445)
chr2 (49-120)||(29168808-29168881)
chr2 (44-110)||(37966451-37966517)
chr2 (49-110)||(23047998-23048059)
chr2 (44-108)||(6885007-6885071)
chr2 (58-110)||(25094447-25094499)
chr2 (22-110)||(38689004-38689092)
chr2 (52-104)||(40721872-40721924)
chr2 (52-120)||(8757627-8757697)
chr2 (52-120)||(13711144-13711214)
chr2 (63-106)||(29582309-29582352)
chr2 (52-120)||(36383545-36383615)
chr2 (19-110)||(43791676-43791767)
chr2 (52-110)||(11164294-11164352)
chr2 (52-110)||(26273269-26273327)
chr2 (77-115)||(31629694-31629732)
chr2 (52-110)||(34141538-34141596)
chr2 (28-114)||(38464504-38464589)
chr2 (52-110)||(39285948-39286006)
chr2 (52-109)||(13881191-13881248)
chr2 (52-109)||(14021316-14021373)
chr2 (76-121)||(15019112-15019157)
chr2 (63-125)||(39133800-39133864)
chr2 (66-110)||(5962733-5962777)
chr2 (50-110)||(7497907-7497967)
chr2 (58-110)||(9377682-9377734)
chr2 (42-114)||(12175236-12175308)
chr2 (78-114)||(14151706-14151742)
chr2 (63-120)||(19913867-19913926)
chr2 (76-112)||(30487394-30487430)
chr2 (54-110)||(38598269-38598325)
[»] chr5 (52 HSPs)
chr5 (57-122)||(35616724-35616789)
chr5 (49-104)||(15917941-15917996)
chr5 (52-114)||(125183-125245)
chr5 (52-114)||(11306787-11306849)
chr5 (44-108)||(12401289-12401353)
chr5 (19-110)||(3154528-3154619)
chr5 (54-130)||(33243661-33243739)
chr5 (52-110)||(5005208-5005266)
chr5 (49-120)||(8959243-8959316)
chr5 (49-120)||(9594561-9594634)
chr5 (49-120)||(15622127-15622200)
chr5 (49-120)||(30574292-30574365)
chr5 (52-110)||(31625994-31626052)
chr5 (49-120)||(33823609-33823682)
chr5 (21-110)||(9240214-9240303)
chr5 (22-115)||(22402727-22402819)
chr5 (45-110)||(28501712-28501777)
chr5 (49-110)||(36786173-36786234)
chr5 (52-113)||(37821059-37821120)
chr5 (18-110)||(1760456-1760548)
chr5 (63-120)||(2051009-2051068)
chr5 (79-115)||(14126504-14126540)
chr5 (63-120)||(14914453-14914512)
chr5 (52-130)||(31284312-31284394)
chr5 (44-120)||(7077249-7077327)
chr5 (51-110)||(12417721-12417780)
chr5 (64-110)||(1108093-1108139)
chr5 (49-120)||(3263423-3263496)
chr5 (52-110)||(3518278-3518336)
chr5 (76-110)||(4985458-4985492)
chr5 (49-120)||(9596729-9596802)
chr5 (52-114)||(12203236-12203298)
chr5 (49-120)||(12512876-12512949)
chr5 (52-110)||(12612935-12612993)
chr5 (49-120)||(17489431-17489504)
chr5 (49-120)||(19271942-19272015)
chr5 (25-110)||(31627034-31627120)
chr5 (52-110)||(35358853-35358911)
chr5 (52-114)||(38919937-38919999)
chr5 (76-110)||(41210456-41210490)
chr5 (77-114)||(6515381-6515418)
chr5 (56-113)||(22653731-22653788)
chr5 (49-110)||(22920407-22920468)
chr5 (70-120)||(25345421-25345473)
chr5 (63-125)||(43152989-43153053)
chr5 (76-108)||(4820252-4820284)
chr5 (79-115)||(5740436-5740472)
chr5 (19-120)||(8955543-8955646)
chr5 (63-103)||(9599685-9599725)
chr5 (58-110)||(10469871-10469923)
chr5 (52-120)||(28041976-28042044)
chr5 (79-115)||(39032549-39032585)
[»] chr4 (45 HSPs)
chr4 (22-110)||(46844129-46844217)
chr4 (63-110)||(22071593-22071640)
chr4 (49-120)||(8026679-8026752)
chr4 (63-109)||(31318844-31318890)
chr4 (49-120)||(36728537-36728610)
chr4 (52-120)||(4949152-4949222)
chr4 (49-125)||(15638208-15638286)
chr4 (44-120)||(24235403-24235481)
chr4 (44-120)||(44368112-44368190)
chr4 (44-120)||(49424730-49424808)
chr4 (20-110)||(3475963-3476053)
chr4 (49-120)||(5208242-5208315)
chr4 (58-112)||(19314999-19315053)
chr4 (49-120)||(27001324-27001397)
chr4 (49-120)||(47105994-47106067)
chr4 (66-120)||(13267410-13267466)
chr4 (50-120)||(51377209-51377281)
chr4 (76-116)||(13182420-13182460)
chr4 (54-110)||(21766642-21766698)
chr4 (63-120)||(29949602-29949661)
chr4 (63-120)||(41495096-41495155)
chr4 (64-108)||(42177980-42178024)
chr4 (19-120)||(42915105-42915207)
chr4 (49-125)||(7037399-7037477)
chr4 (19-90)||(51691555-51691626)
chr4 (49-120)||(3223072-3223145)
chr4 (20-110)||(6126948-6127038)
chr4 (76-110)||(6686141-6686175)
chr4 (49-120)||(20632563-20632636)
chr4 (49-120)||(25936323-25936396)
chr4 (52-106)||(30250216-30250270)
chr4 (44-114)||(30866441-30866511)
chr4 (52-110)||(36081906-36081964)
chr4 (52-110)||(50291377-50291435)
chr4 (44-110)||(56025351-56025417)
chr4 (76-121)||(20056466-20056511)
chr4 (76-125)||(30973664-30973713)
chr4 (49-110)||(33484021-33484082)
chr4 (45-125)||(40258283-40258361)
chr4 (76-117)||(2193751-2193794)
chr4 (49-118)||(18568730-18568801)
chr4 (52-108)||(18944382-18944438)
chr4 (64-104)||(37732050-37732090)
chr4 (78-110)||(43307308-43307340)
chr4 (76-120)||(51318786-51318830)
[»] chr6 (22 HSPs)
chr6 (43-110)||(237307-237374)
chr6 (44-120)||(17835695-17835773)
chr6 (44-110)||(2881428-2881494)
chr6 (49-125)||(6435114-6435192)
chr6 (49-125)||(12441605-12441683)
chr6 (44-124)||(15328568-15328650)
chr6 (52-110)||(7304023-7304081)
chr6 (49-110)||(1803964-1804025)
chr6 (63-120)||(21210339-21210398)
chr6 (44-124)||(4923025-4923107)
chr6 (44-120)||(15364742-15364820)
chr6 (44-120)||(25924774-25924852)
chr6 (44-110)||(2862167-2862233)
chr6 (44-110)||(3339409-3339475)
chr6 (64-110)||(12151787-12151833)
chr6 (52-110)||(17442917-17442975)
chr6 (20-110)||(22422245-22422335)
chr6 (20-110)||(24881664-24881754)
chr6 (63-120)||(31480765-31480822)
chr6 (21-120)||(3401165-3401263)
chr6 (49-114)||(3660268-3660335)
chr6 (67-120)||(12501557-12501612)
[»] scaffold0651 (1 HSPs)
scaffold0651 (63-109)||(4780-4826)
[»] scaffold0193 (1 HSPs)
scaffold0193 (63-110)||(24768-24815)
[»] scaffold0514 (1 HSPs)
scaffold0514 (49-120)||(1411-1484)
[»] scaffold0172 (1 HSPs)
scaffold0172 (44-110)||(17070-17136)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-120)||(147171-147244)
[»] scaffold0014 (2 HSPs)
scaffold0014 (19-107)||(198317-198405)
scaffold0014 (52-110)||(145142-145200)
[»] scaffold0576 (1 HSPs)
scaffold0576 (44-120)||(9513-9591)
[»] scaffold0058 (1 HSPs)
scaffold0058 (52-120)||(3026-3096)
[»] scaffold0054 (1 HSPs)
scaffold0054 (52-120)||(31518-31588)
[»] scaffold0260 (1 HSPs)
scaffold0260 (49-115)||(21378-21444)
[»] scaffold0046 (1 HSPs)
scaffold0046 (76-114)||(88270-88308)
[»] scaffold0016 (1 HSPs)
scaffold0016 (50-107)||(204363-204420)
[»] scaffold0004 (1 HSPs)
scaffold0004 (49-110)||(249057-249118)
[»] scaffold0295 (2 HSPs)
scaffold0295 (78-110)||(3602-3634)
scaffold0295 (78-110)||(6087-6119)
[»] scaffold0060 (1 HSPs)
scaffold0060 (52-120)||(6900-6970)


Alignment Details
Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 7420819 - 7420724
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||||||||||  | ||||||||  |||||||||||  ||||||||| ||||||||| ||||||||||| || ||||||||||||| ||||    
T  7420819 aagagtaatgatatttgtacaattatttcgtgacaacttttaggacaacttttttcttctcttttcttattggtcaagaacaatagagagagaaag 7420724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 51436352 - 51436406
Alignment:
Q  55 acttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    ||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||    
T  51436352 acttttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 51436406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 18610952 - 18610860
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||| ||||||||  | ||||| |||| ||||||||||| |||||||||  | | ||||||| |||||||| |||||||||||||||||||||    
T  18610952 gagtagtgatatttgaacaattaattaa-gacaacttttgtgacaactttcctttcctctctttttattggtcaaaaacaatagagagaaaaag 18610860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 37741870 - 37741927
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    |||| ||||| ||||||||| || ||||||||||| ||||||||||||||||||||||    
T  37741870 acaatttttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 37741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 50777338 - 50777399
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| ||| | |||||| || || |||||||||||||||||||||||||||||||||||    
T  50777338 atgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatagagaga 50777399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 19920923 - 19920852
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaa 113  Q
    |||||| ||||||||| | ||||||||| || |||||||||||||||||| |||||||||  ||||||||||    
T  19920923 atttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatgaagagagaaaa 19920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 29094666 - 29094734
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||||||| |||||| ||||| |  ||||||||||||||| |||| |||||||||||||||| ||||    
T  29094666 acaacttttgggacaaccttattgtgttctcttcttattggtcaaaatcaatagagagaaaaagaaaga 29094734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 6396480 - 6396410
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    ||||| |||| ||||||||| || ||||||||||| ||||||||||||||||||  |||||||||| ||||    
T  6396480 acaacatttgagacaactttgttgttctctcttctcattggttaaaaacaatagaaagagaaaaaggaaga 6396410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 27895671 - 27895726
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaa 99  Q
    |||||| ||||||||| | ||||||||| || ||||||||||||||||||||||||    
T  27895671 atttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaa 27895726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 43757734 - 43757671
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||| ||||||||| || ||||||||| | |||||||||||||||||| ||||||||| ||||    
T  43757734 ttttgagacaactttgttgttctctcttttcattggttaaaaacaatagggagaaaaagaaaga 43757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 48390026 - 48390069
Alignment:
Q  81 tcttcttattggttaaaaacaatagagagaaaaagtaagaaaga 124  Q
    |||| |||||||||||||||||||||||||||||| ||||||||    
T  48390026 tctttttattggttaaaaacaatagagagaaaaagaaagaaaga 48390069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 50035447 - 50035514
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| ||||||||||| | |||||||||||| |||||| || |||||||| ||||| ||||||||||    
T  50035447 tatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaaagaatagagaga 50035514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 644849 - 644791
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| |||||||||||| ||||||||||| ||| || ||||||||||||||||    
T  644849 acaacatttgagacaactttattgttctctcttctcattagtcaaaaacaatagagaga 644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 2827628 - 2827686
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||| ||| || |||||||||||||||||| ||||||||||||||||    
T  2827628 acaacctttgagacaattttgttgttctctcttcttattggtcaaaaacaatagagaga 2827686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 27787642 - 27787584
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||| || ||||||||||| ||| || ||||||||||||||||    
T  27787642 acaacttttgagacaactttgttgttctctcttctcatttgtcaaaaacaatagagaga 27787584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 46903623 - 46903565
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| ||||||||||||||||    
T  46903623 acaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagaga 46903565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 29362621 - 29362685
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| |||| ||||    
T  29362621 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaa 29362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 25130865 - 25130805
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    ||||| ||||||||||| | |||||| || || |||||||||||||||||| |||||||||    
T  25130865 tatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaat 25130805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 25302574 - 25302641
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataa 128  Q
    ||||||||| || ||||||||| | ||||||||||||||||  |||||||||||| |||| |||||||    
T  25302574 gacaactttttttttctctcttttcattggttaaaaacaatagagagagaaaaaggaagagagaataa 25302641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 25995622 - 25995543
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||| |||||||||||   |||||| ||||| ||||||||| |||||||| |||||||||  |||||||||||| ||||    
T  25995622 tatttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatggagagagaaaaaggaaga 25995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 41558148 - 41558088
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| ||| |||||||||  | |||| ||||||||||||| ||||||||||||||||    
T  41558148 tgacaactattgtgacaactttccttttctttcttcttattggtcaaaaacaatagagaga 41558088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 3607963 - 3608014
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||| ||||||||| |||||||| ||||| ||| ||||||||||    
T  3607963 gacaactttattgttctctctttttattggtcaaaaataatggagagaaaaa 3608014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 13813711 - 13813641
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  13813711 acaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 13813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 23472233 - 23472186
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    ||||||| |||||||||| |||||||| ||||||||||||||| ||||    
T  23472233 ctctcttgttattggttagaaacaataaagagaaaaagtaagagagaa 23472186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 29489268 - 29489335
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| ||||||||||| | |||||| || || |||| ||||||||||||| ||||||||| ||||||    
T  29489268 tatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatggagaga 29489335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 37947138 - 37947208
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| |||||| || || ||||||||||| |||||| |||||||||  |||||||||||| ||||    
T  37947138 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatggagagagaaaaaggaaga 37947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 39669964 - 39669901
Alignment:
Q  47 taatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||   |||||||||||| |||||| || ||||||||| |||||||| ||||||    
T  39669964 taatgacaactttgatgacaactttatttttctctatttttattggttgaaaacaatggagaga 39669901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 48028709 - 48028621
Alignment:
Q  21 agagtaatgatatttacataattatttaatga-caacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||  | ||||||||  ||| ||| |||||  |||||||| || ||||||||||| |||||||||||||||| ||||||    
T  48028709 agagtaatgatatttgaacaattattt--tgatcaatttttggtacaactttgttgttctctcttctcattggttaaaaacaatggagaga 48028621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 3919451 - 3919389
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||| |||||||||||| ||||||  ||| |||||| |||||||||||||| |||||    
T  3919451 acaatttttgggacaactttattattctcttctctcattggtcaaaaacaatagagaaaaaaa 3919389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 21446136 - 21446190
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    ||||| |||| ||||||||| ||  |||||||||| |||||||||||||||||||    
T  21446136 acaacctttgagacaactttgttgatctctcttctcattggttaaaaacaataga 21446190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 24158803 - 24158745
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || |||| ||||||||||||| |||||||||| |||||    
T  24158803 acaacctttgagacaactttgttgttctgtcttcttattggtaaaaaacaataaagaga 24158745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 32873470 - 32873436
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||| ||||||||||||||||    
T  32873470 ttctctcttcttattggtaaaaaacaatagagaga 32873436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 34941838 - 34941896
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||  |||||||| |||  ||||||||||||||||| ||||||||| ||||||    
T  34941838 acaacttttatgacaacttcatttctctctcttcttattggtcaaaaacaatggagaga 34941896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 36669285 - 36669358
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| ||||| |||  |||||||||||| ||||    
T  36669285 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaaga 36669358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 42829250 - 42829284
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||| ||||||||||||||||    
T  42829250 ttctctcttcttattggtaaaaaacaatagagaga 42829284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 42843273 - 42843330
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaa 118  Q
    |||||| || || |||||||||||||||||| |||||||||  |||||||||||||||    
T  42843273 gacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaa 42843330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 43105258 - 43105200
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||| |||||||||||| ||||||||| |||||||| ||||| ||| ||||||    
T  43105258 acaatttttgggacaactttattgttctctctttttattggtcaaaaataatggagaga 43105200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 51168686 - 51168744
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||  ||||| ||| || |||||| ||||||||||||||||||||| ||||||    
T  51168686 acaacttttatgacaattttttttttctcttttcttattggttaaaaacaatggagaga 51168744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 6829700 - 6829761
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||  || || |||||||||||||||||| ||||| ||||||||||    
T  6829700 atgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaataatagagaga 6829761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 7371863 - 7371924
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||   || |||||| || |||||||||||||||||| ||||||||| ||||||    
T  7371863 atgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatggagaga 7371924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 25239179 - 25239216
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaa 113  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  25239179 ttctctcttcttattggtcaaaaacaatggagagaaaa 25239216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 26501451 - 26501390
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||   |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  26501451 atgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 26501390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 36930685 - 36930742
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||| || || ||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  36930685 gacaaccttctttttctctctttttattggtcaaaaacaatggagagaaaaaggaaga 36930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 37619984 - 37620073
Alignment:
Q  25 taatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||||| ||| |||| |||| |||||||| |||||| || || ||||| ||| |||||| | ||||| || |||||| ||||    
T  37619984 taatgatatttacacaatcattttatgataacttttgggacaacctttttattctcactttttattgatcaaaaagaacagagaggaaaa 37620073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 9882555 - 9882639
Alignment:
Q  25 taatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    |||||||||||  | ||||||||  |||||||||||||| ||| ||| || |||| || | |||||||| |||||||||| ||||    
T  9882555 taatgatatttgtacaattatttggtgacaacttttgcggcaaatttctttttctttcgttttattggtcaaaaacaataaagag 9882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 19651537 - 19651493
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||    
T  19651537 ttctctctttttattggtcaaaaacaatggagagaaaaaggaaga 19651493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 39010968 - 39010897
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| ||||||||  || ||||||||| | |||||| |||||||||  |||||||||||| ||||    
T  39010968 gacaacttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaaga 39010897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 40053053 - 40052997
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||||||| || ||||||||| | |||||| ||||| ||||||||||||||    
T  40053053 tttgagacaactttgttgttctctcttttcattggtcaaaaataatagagagaaaaa 40052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 43195998 - 43196077
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||||||||| | || ||||||  | ||||||||| | |||||| |||||||||  |||||||||||| ||||    
T  43195998 tatttaatgacaactttggtgataactttgatgttctctcttttgattggtcaaaaacaatggagagagaaaaaggaaga 43196077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 50775231 - 50775179
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaacttt 71  Q
    |||||||||||||||||| | ||||||||  |||||| ||||| |||||||||    
T  50775231 aaagagtaatgatatttatacaattattttttgacaatttttgtgacaacttt 50775179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 33511786 - 33511698
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    ||||||||||||||||  | || |||||  ||| |||||||| |||||| || ||||||||||||||||||||| ||||||||||||||    
T  33511786 aagagtaatgatatttgtacaactattttgtgaaaacttttgggacaacattcttcttctctcttcttattggtcaaaaacaatagaga 33511698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 34970366 - 34970290
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||| ||||||||| |  |||||||| || |||||||||||||||||||||||||||| ||||||||||| ||||    
T  34970366 atttaaggacaactttagtaacaactttgtttttctctcttcttattggttaaaaacaatggagagaaaaaggaaga 34970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 6825186 - 6825253
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||| |||||||||| | | |||| ||||| |||||||||||||||||||||||||||| ||||||    
T  6825186 tatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatggagaga 6825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 8429004 - 8428957
Alignment:
Q  73 ttcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  8429004 ttcttctctcttcttattgtttaaaaacaatagagagaaaaagaaaga 8428957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 8142903 - 8143000
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||| |||||||||  | |||||||| ||||||||||||| |||||| ||  | ||||||| |||||||||||| ||| ||||||||||||||| ||||    
T  8142903 gagtgatgatatttgaacaattatttgatgacaacttttgtgacaaccttccttttctctcctcttattggttacaaa-aatagagagaaaaagaaaga 8143000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 36675510 - 36675420
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||  | ||| |||| ||||||||| ||| || |||||| || |||| |||| |||||||| ||||||||||||||||    
T  36675510 aagagtaatgatatttgaacaatcatttcatgacaactcttgggataactttgttgttctttcttgttattggtcaaaaacaatagagaga 36675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 42651073 - 42651015
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || ||||||||||| |||||||||||||||||||||||    
T  42651073 acaacttttgagacaaccttgttgttctctcttctcattggttaaaaacaatagagaga 42651015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 8074641 - 8074705
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||   |||||||||  | ||||||||||||||||||| |||||||||||||||||||    
T  8074641 tgacaactttgatgacaactttcattttctctcttcttattggttcaaaacaatagagagaaaaa 8074705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 40211680 - 40211735
Alignment:
Q  67 actttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||| || ||||||||||||||||||||||||||||  |||||||||||||||||    
T  40211680 actttgtttttctctcttcttattggttaaaaacaatggagagagaaaaagtaaga 40211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 30927841 - 30927919
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  30927841 atttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaaga 30927919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 2597075 - 2597148
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  2597075 atgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 2597148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 4265534 - 4265604
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||||||||||| ||||| ||||||  |||| ||| | |||||| ||||||||||||||||||||    
T  4265534 atttgatgacaacttttgtgacaattttatttctctcgcttttgattggtcaaaaacaatagagagaaaaa 4265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 7900446 - 7900380
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttctt-attggttaaaaacaatagagagaaaaa 114  Q
    ||||| |||||||  ||||||||||| ||||||| |||| |||||| ||||||||||||||||||||    
T  7900446 atgacgacttttgaaacaactttatttttctctcctctttattggtaaaaaacaatagagagaaaaa 7900380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 21273628 - 21273686
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||||||  | ||||||||| | |||||||||||||||||||||||    
T  21273628 acaacttttgtgacaacttttcttttctctcttttcattggttaaaaacaatagagaga 21273686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 24503071 - 24503009
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaa 113  Q
    ||||||||||  |||||||| ||| ||||||||| | |||||| |||||||||||||||||||    
T  24503071 gacaacttttatgacaacttcatttttctctcttttcattggtcaaaaacaatagagagaaaa 24503009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 43605555 - 43605645
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||  | ||   |||| |||||||||||| |||||| |   | |||||||||||||||||| ||||||||||||||||    
T  43605555 aagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaatagagaga 43605645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 45405753 - 45405811
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| |||||||||||| ||||||||||| |||||| |||||||||| |||||    
T  45405753 acaacctttgagacaactttattgttctctcttctcattggtcaaaaacaataaagaga 45405811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 3394622 - 3394690
Alignment:
Q  54 aacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||| |||||||||||| ||||||||||| |||| ||||||| |||  |||||||||||| ||||    
T  3394622 aacttttgggacaactttattgttctctcttctcattgattaaaaataatggagagagaaaaagaaaga 3394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 7678914 - 7678823
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||||||  | || ||||| || ||||||||||  |||||||  || ||||||||| | |||||||||||||||| ||||||||||    
T  7678914 gagtaatgatatttgaacaactatttgat-acaacttttgtaacaacttcttttttctctcttttcattggttaaaaacaatggagagaaaaa 7678823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 20994974 - 20995034
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||| |||||| |   | |||||||||||||||||| ||||||||||||||||    
T  20994974 tgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaatagagaga 20995034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 22767284 - 22767205
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataa 128  Q
    ||||||||||| ||||||||  || ||||||||| | |||||| |||||||||  |||||||||||| |||| |||||||    
T  22767284 gacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagaataa 22767205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 28772447 - 28772384
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaaga 124  Q
    |||||||||||| |||| | || |||||||| |||||||||  |||||||||||||||||||||    
T  28772447 gacaactttatttttctttttttttattggtaaaaaacaatggagagagaaaaagtaagaaaga 28772384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 36497790 - 36497739
Alignment:
Q  76 ttctctcttcttattggttaaaaacaataga--gagaaaaagtaagaaagaa 125  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||| ||||    
T  36497790 ttctctctttttattggttaaaaacaatagagagagaaaaagtaagagagaa 36497739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 43587827 - 43587724
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagt 116  Q
    |||||| ||||||||||  |||   |||||||||||||||| | ||||||||| || ||||||||| | |||||| |||| ||||  ||||||||||||     
T  43587827 aaagagcaatgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatggagagagaaaaagg 43587728  T
Q  117 aaga 120  Q
    ||||    
T  43587727 aaga 43587724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 154444 - 154385
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| ||| |||||||||  | ||||||||| |||||||| ||||||||||||||||    
T  154444 gacaactattgtgacaactttcattttctctctttttattggtcaaaaacaatagagaga 154385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 22999464 - 22999523
Alignment:
Q  47 taatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    ||||||||||||||| |||||| || || |||||||||  ||||||||||||| ||||||    
T  22999464 taatgacaacttttgtgacaaccttctttttctctctttgtattggttaaaaataataga 22999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 32185595 - 32185642
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| || |||||||||||||||||| ||||||||| ||||||    
T  32185595 gacaactttgtttttctctcttcttattggtcaaaaacaatggagaga 32185642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 5924971 - 5924905
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| |||||||||||   |||||| ||||| |||||||||||||||||| ||||| ||| ||||||    
T  5924971 atttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaataatggagaga 5924905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 5925216 - 5925150
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||||||  |||||| ||||| |||||| ||||||||||| ||||| ||| ||||||    
T  5925216 atttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaataatggagaga 5925150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 6105345 - 6105415
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||| ||||||||| | |||||||||||| | ||||||| | |||||| |||||||||  |||||||||    
T  6105345 atttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatgtagagaaaaa 6105415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 13884472 - 13884399
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | ||||| ||| || |||||||||||||||| | |||||||||  |||||||||||| ||||    
T  13884472 atgacaactttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaaga 13884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 13924162 - 13924100
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||| |||||  || || | ||||||||| ||||||||||| |||||||||||||||    
T  13924162 acaacttttgtgacaatcttgttgtcctctcttctcattggttaaaaccaatagagagaaaaa 13924100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 19723121 - 19723194
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || ||||||||||||||| || |||||||||  |||||||||||| ||||    
T  19723121 atgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaaga 19723194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 23265240 - 23265322
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    |||||||||||||||| | || | |||  | |||||||||||||||| ||| || | ||||||| |||||||| |||||||||    
T  23265240 agagtaatgatatttaaacaacttttttgttacaacttttgcgacaattttgttgtgctctctttttattggtcaaaaacaat 23265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 25430799 - 25430741
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || |  ||||||||||||||| ||||||||||||||||    
T  25430799 acaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagaga 25430741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 35701788 - 35701822
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagagaaaa 113  Q
    ||||||||||||||| |||||||||||||||||||    
T  35701788 tctcttcttattggtcaaaaacaatagagagaaaa 35701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 41273671 - 41273598
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| |  ||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  41273671 atgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 41273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 14233564 - 14233613
Alignment:
Q  54 aacttttgcgacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    |||||||| ||||||||| || ||||||||||| |||||| |||||||||    
T  14233564 aacttttgtgacaactttgttgttctctcttctcattggtaaaaaacaat 14233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 33944943 - 33944850
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||||||| | || ||||| ||||||| ||||  ||| || ||  | |||| ||||||||||| | ||||||||| ||||||||||    
T  33944943 agagtaatgatatttatacaactatttgatgacaatttttatgacgacatttcttttctgtcttcttattgatcaaaaacaatggagagaaaaa 33944850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 41293637 - 41293697
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | ||||||||  || |||||||||||||||||| ||||||||| ||||||    
T  41293637 atgacaactttagtgacaacttgttt-ttctctcttcttattggtcaaaaacaatggagaga 41293697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 5359467 - 5359416
Alignment:
Q  76 ttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||||| ||||    
T  5359467 ttctctctttttattggtcaaaaacaatggagagagaaaaagtaagagagaa 5359416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 5742581 - 5742633
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||    
T  5742581 tttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagaga 5742633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 11139052 - 11138981
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaa 118  Q
    ||||||||||| | ||||||||| || |||| |||| |||||||| ||||| |||  |||||||||||||||    
T  11139052 atgacaactttggtgacaactttgtttttctatctttttattggtcaaaaataatgaagagagaaaaagtaa 11138981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 21649088 - 21649156
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||||||| |||||| || || | ||||||| |||||||| ||||| ||| ||||||||||| ||||    
T  21649088 acaacttttgggacaaccttgttgtgctctctttttattggtcaaaaataatggagagaaaaaggaaga 21649156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 29910128 - 29910188
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||   |||||||||  | ||||||||||| ||||||| |||||||||||||||    
T  29910128 tgacaactttgttgacaacttttattttctctcttctcattggttcaaaacaatagagaga 29910188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 33635714 - 33635670
Alignment:
Q  66 aactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| ||||||||||| |||||| |||| |||||||||||    
T  33635714 aactttattgttctctcttctcattggtcaaaaccaatagagaga 33635670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 34247928 - 34247857
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    ||||||||||| |||||| || || ||||||||| | |||||| |||||||||||  |||||||||| ||||    
T  34247928 gacaacttttgggacaaccttgttgttctctcttttcattggtcaaaaacaatagaaagagaaaaaggaaga 34247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 43602333 - 43602393
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaata 104  Q
    |||||||||||||||| | ||||||||| ||  |||||||| | |||||| ||||||||||    
T  43602333 atttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaata 43602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 32316008 - 32315921
Alignment:
Q  23 agtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||  | || ||||| | ||||||||||| |||||| || || |||||||||||||||||| ||||||||||||||||    
T  32316008 agtaatgatatttgaacaactatttgacgacaacttttgtgacaacattgtttttctctcttcttattggtcaaaaacaatagagaga 32315921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 26041471 - 26041401
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||||||||| | ||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  26041471 attttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagaaaaa 26041401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 47379712 - 47379655
Alignment:
Q  53 caacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||||||||||||||||    
T  47379712 caacttttgagacaactttgttgttctctcttctcattggttaaaaacaatagagaga 47379655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 28548159 - 28548211
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  28548159 tttgagacaactttattgttctctcttcttattggttaaaaagaatagagaga 28548211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 39369463 - 39369385
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| ||||||||| | ||||||||| || |||||| |||||||||||||||||||||  |||||||||||| ||||    
T  39369463 atttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaaga 39369385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 2005871 - 2005802
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataaaa 130  Q
    ||||||||| || ||||||||||||||||||||||||||||  |||||||||||  |||| |||||||||    
T  2005871 gacaactttgtttttctctcttcttattggttaaaaacaatgcagagagaaaaaagaagagagaataaaa 2005802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 384704 - 384643
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaa 113  Q
    ||||| |||| ||||||||| || ||||||||||| |||||||||||| |||||||||||||    
T  384704 acaacctttgagacaactttgttattctctcttctcattggttaaaaaaaatagagagaaaa 384643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 37385148 - 37385219
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaa 118  Q
    ||||||||||| | |||||| || ||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  37385148 atgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaattgagagagaaaaagtaa 37385219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 42118620 - 42118671
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    ||||| |||||| || ||||||||||||||||||||| ||||||||||||||    
T  42118620 ttttgtgacaaccttcttcttctctcttcttattggtcaaaaacaatagaga 42118671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 7458258 - 7458172
Alignment:
Q  26 aatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaa 112  Q
    ||||||||||  | ||||||||  |||||| |||||  ||||  || ||||||||||||||||||||| ||||| ||||||||||||    
T  7458258 aatgatatttgtacaattattttgtgacaatttttgaaacaatgttcttcttctctcttcttattggtaaaaaataatagagagaaa 7458172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 33050344 - 33050278
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||||| | |||||| || ||  ||||||||||||||||| ||||||||||||||||    
T  33050344 atttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagaga 33050278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 37970086 - 37970028
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| ||||||||||||||||    
T  37970086 acaacatttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagaga 37970028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 42431879 - 42431806
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  42431879 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 42431806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 44185329 - 44185271
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| | ||| ||||||||||| |||||| ||||||||||||||||    
T  44185329 acaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaatagagaga 44185271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 31467784 - 31467703
Alignment:
Q  25 taatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    |||||||||||  | |||  ||| ||||||||||||| || ||||||  | |||||| ||||||||||||||||||||||||    
T  31467784 taatgatatttgtacaatcgtttgatgacaacttttgtgataactttcattttctcttttcttattggttaaaaacaataga 31467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 35212887 - 35212955
Alignment:
Q  64 acaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataaaa 130  Q
    |||||||| || ||||||||||| |||||||||||| |||  |||||||||||| |||| |||||||||    
T  35212887 acaactttgttgttctctcttctcattggttaaaaataatagagagagaaaaaggaagagagaataaaa 35212955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 35590710 - 35590771
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| ||||| |||||| || || |||| |||| |||||||||||||||||||||||||    
T  35590710 atgacaatttttgggacaaccttgttgttctttcttattattggttaaaaacaatagagaga 35590771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 48383243 - 48383308
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaa 122  Q
    ||||| ||||| |||||| || ||||||||||||||| || || ||||||||||||||| ||||||    
T  48383243 ttttgggacaattttattattttctcttcttattggtcaataataatagagagaaaaagaaagaaa 48383308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 11070375 - 11070323
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| |||||||||||| | |||||| ||||||||||||||||    
T  11070375 tttgagacaactttgttcttctctcttttcattggtcaaaaacaatagagaga 11070323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 12102626 - 12102697
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| ||||||||  || ||||||||| | ||||||||||||||||  |||||||||||| ||||    
T  12102626 gacaacttttgtgacaacttattttttctctcttttcattggttaaaaacaatggagagagaaaaaggaaga 12102697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 25614736 - 25614807
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaa 118  Q
    ||||||| ||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||||||    
T  25614736 atgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatggagagagaaaaagtaa 25614807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 7295621 - 7295562
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||  ||||| || || ||||||||||| |||||| ||||||||||||||||    
T  7295621 gacaacttttggaacaaccttgttattctctcttctcattggtcaaaaacaatagagaga 7295562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 32044941 - 32044863
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| ||||||||| | ||||| ||| ||  |||||||||||||| ||||||||||||  || ||||||||||||||    
T  32044941 atttaaggacaactttagtgacaattttgtttatctctcttcttattagttaaaaacaatgaagggagaaaaagtaaga 32044863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 37149392 - 37149451
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||  |||||| || || |||| ||||||||||||| ||||||||||||||||    
T  37149392 gacaacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaatagagaga 37149451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 42060819 - 42060748
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||||||||| | |||||||||    ||||||||| | |||||| ||||||||| ||||||||||    
T  42060819 tatttaatgacaactttggtgacaactttgcctttctctcttttgattggtcaaaaacaatggagagaaaaa 42060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 47530200 - 47530271
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||| ||||||||||| | || ||| || || |||| |||||||||||| |||||||||| ||||||||||    
T  47530200 tatttcatgacaactttggtgataaccttgtttttctttcttcttattggctaaaaacaatggagagaaaaa 47530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 2323454 - 2323388
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||| |||| || || |||||| |||| |||| | |||||| ||||||||||||||||    
T  2323454 atttaatgacaacatttgtgagaattttatttttctttcttttcattggtcaaaaacaatagagaga 2323388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 2600452 - 2600510
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||    
T  2600452 acaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagaga 2600510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 7410495 - 7410560
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| |||| |||||||| ||||| |||||| || ||||||||||| ||| ||||||||||||||||    
T  7410495 atttgatgataacttttgtgacaattttattttt-tctcttcttatcggtcaaaaacaatagagaga 7410560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 17157294 - 17157224
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||||||| | || ||||||  | ||||||||| | |||||| ||||||||| ||||||||||    
T  17157294 atttaatgacaactttggtgataactttgcttttctctcttttgattggtcaaaaacaatggagagaaaaa 17157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 23034231 - 23034289
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || | |||| ||||||||||| ||||||||||||||||    
T  23034231 acaacttttgggacaaccttgttgtgctcttttcttattggtcaaaaacaatagagaga 23034289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 27164752 - 27164806
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    ||||||| ||| | ||||||||| || |||||||||||||||||| |||||||||    
T  27164752 atgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 27164806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 27704588 - 27704530
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||| || |  ||||||||||||||| ||||||||||| ||||    
T  27704588 acaacttttgggacaactttgttgtgttctcttcttattggtcaaaaacaatagcgaga 27704530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 30864332 - 30864405
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||| ||||||||||| |||||||||  |||||||||||| ||||    
T  30864332 atgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaaggaaga 30864405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 38978648 - 38978575
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || ||||||||||||||| || |||||||||  |||||||||||| ||||    
T  38978648 atgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaaga 38978575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 44511300 - 44511230
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||||||||| | ||||| ||| || |||||| ||||||||||| ||||||||| | ||||||||    
T  44511300 attttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatggggagaaaaa 44511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 640539 - 640463
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaa-gta-agaaagaataaaa 130  Q
    |||| ||||||||| || ||||||||||| |||||| |||||||||  ||||||||||| ||| |||||||||||||    
T  640539 tttgagacaactttgttgttctctcttctcattggtcaaaaacaattgagagagaaaaatgtagagaaagaataaaa 640463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 10014870 - 10014931
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | ||||| ||| || ||||||||| |||||||| ||||||||| ||||||    
T  10014870 atgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatggagaga 10014931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 18925941 - 18925990
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    ||||||||| |||||||| || |||||||||||||||||| || ||||||    
T  18925941 ttctctctttttattggtcaacaacaatagagagaaaaaggaaaaaagaa 18925990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 43550960 - 43551021
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaa 118  Q
    ||||||||||||||| ||  ||| |||| ||| |||| |||||||||||||||||| |||||    
T  43550960 ttttgcgacaactttttttctctatctttttactggtaaaaaacaatagagagaaagagtaa 43551021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 21588869 - 21588913
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||||||||| |||||| ||||||||| ||||||||||| ||||    
T  21588869 ttctctcttctcattggtcaaaaacaatggagagaaaaaggaaga 21588913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 48057406 - 48057466
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    ||||| |||||| |||| | ||||| ||| || |||||||||||||||||| |||||||||    
T  48057406 tatttgatgacatctttagtgacaattttgtttttctctcttcttattggtcaaaaacaat 48057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 35756142 - 35756075
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| ||||||||||| | ||||||||| || |||||||||||||||||||||||||||| ||||||    
T  35756142 tatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatggagaga 35756075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 34021378 - 34021439
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | ||||||||| || |||||||||||||||||| ||||||||||||||||    
T  34021378 atgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatagagaga 34021439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 28263706 - 28263628
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | |||||||||||| |||| ||||||||||||| |||||||||  |||||||||||| ||||    
T  28263706 atttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatggagagagaaaaaggaaga 28263628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 44910890 - 44910799
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||  | |||  |||| |||||| ||||| ||||||||   | |||||||||||||||||| ||||||||||||||||    
T  44910890 aaagagtaatgatatttgaacaatcttttagtgacaatttttgtgacaacttacattttctctcttcttattggtcaaaaacaatagagaga 44910799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 16295617 - 16295559
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||| || ||||||||| |||||||| ||||||||||||||||    
T  16295617 acaacttttgagacaactttgttgttctctctttttattggtcaaaaacaatagagaga 16295559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 43900933 - 43900867
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||| ||||||||| | ||||||||| || |||||||||||||||||||||||| ||| ||||||    
T  43900933 atttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaataatggagaga 43900867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 54233416 - 54233489
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||||||||    
T  54233416 atgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaaga 54233489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 50622046 - 50621953
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||||||||  |  | ||||| |||||||| |||| |||||| || || ||||||||| |||||| | |||||||||||||||||||||    
T  50622046 gagtaatgatatttgaacgactatttcatgacaacctttgggacaaccttgttgttctctcttgttattgatcaaaaacaatagagagaaaaag 50621953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 29533914 - 29533854
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaa 112  Q
    |||||||||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||||    
T  29533914 acaacttttgagacaactttgttgttctctcttctcattggtcaaaaacaattgagagaaa 29533854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 34208450 - 34208362
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| ||||||||  | |||||||| |  |||| ||||| ||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  34208450 gagtagtgatattttgacaattattttaatacaatttttgagacaactttgtttttctctcttctcattgattaaaaacaatagagaga 34208362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 2482616 - 2482662
Alignment:
Q  76 ttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  2482616 ttctctcttcttattggttaaaaacaatggagagagaaaaagtaaga 2482662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 38471789 - 38471738
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    |||| ||||||||| || ||||||||||| ||||||||||||||||||||||    
T  38471789 tttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 38471738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 38692255 - 38692306
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||||||||    
T  38692255 gacaactttctttttctatcttcttattggtcaaaaacaatagagagaaaaa 38692306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 44855412 - 44855334
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | |||||  ||||| |||||||||||||||||||||||| |||  |||||||||||| ||||    
T  44855412 atttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaaaaaatggagagagaaaaaggaaga 44855334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 50879751 - 50879673
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||||| | ||||||||| || |||||||||||||||||| ||| |||||  |||||||||||| |||| ||||    
T  50879751 atgacaactttagtgacaactttgttgttctctcttcttattggtcaaacacaatggagagagaaaaaggaagagagaa 50879673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 52454002 - 52454080
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | ||||||||| ||  ||||||||||||||||| |||||||||  |||||||||||| ||||    
T  52454002 atttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 52454080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 5188389 - 5188327
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||| ||||||||  || ||||||||| | |||||||||||||||| ||||||||||    
T  5188389 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatggagagaaaaa 5188327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 7039173 - 7039211
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7039173 ttctctcttcttattggtcaaaaacaatagagagaaaaa 7039211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 11327269 - 11327203
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||||| | |||||| || ||  ||||||||||||||||| ||||||||||||||||    
T  11327269 atttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagaga 11327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 13159817 - 13159744
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  13159817 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 13159744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 49886816 - 49886758
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||  |||||| ||||| |||||| || |||||||||||||||||||||||||    
T  49886816 acaacttttaggacaaccttattattctctttttttattggttaaaaacaatagagaga 49886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 50025603 - 50025661
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| ||||||||||||||||    
T  50025603 acaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagaga 50025661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 36819112 - 36819051
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  36819112 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 36819051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 47683974 - 47683885
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||  | ||  ||||  |||||||||||| |||||| || |  |||||||||||||||||| ||||||| ||||||||    
T  47683974 agagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaacattagagaga 47683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 53102817 - 53102882
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||| | |||||| || || |||||||||||||||| | ||||||||| ||||||||||    
T  53102817 atgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagaaaaa 53102882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 1031345 - 1031401
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||||  |||||||||||| |||| ||||||||||||| ||||||||| ||||    
T  1031345 acaacttttatgacaactttatttttctttcttcttattggtcaaaaacaatggaga 1031401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 21481917 - 21481861
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||||| |||||| | ||| ||||||||||| |||||| ||||||||||||||    
T  21481917 acaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaatagaga 21481861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 29525360 - 29525316
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  29525360 ttctctctttttattggtcaaaaacaatagagagaaaaagaaaga 29525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 43460543 - 43460483
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||| |||| | ||  | |||||||||||||||||| ||||||||||||||||    
T  43460543 tgacaacttttgggacagccttcattttctctcttcttattggtcaaaaacaatagagaga 43460483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 9027799 - 9027708
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||  | || |||||    ||||||||||  ||||| || || |||||||||||||||||| ||||||||| ||||||    
T  9027799 aaagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagaga 9027708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 33972036 - 33971966
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||| |||||| || || ||||||||||| ||||||||||||||||  |||||||||||| ||||    
T  33972036 acaatttttgagacaaccttgttgttctctcttctcattggttaaaaacaatggagagagaaaaagaaaga 33971966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 41877849 - 41877771
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||||||| | ||||||||| || |||||| || | |||||| |||||||||  |||||||||||| ||||    
T  41877849 atttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaaga 41877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 44127110 - 44127180
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||  |||||| | ||| ||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  44127110 acaacttttatgacaacctcatttttctctcttctcattggttaaaaacaatggagagagaaaaattaaga 44127180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 48178984 - 48179035
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||| |||| | ||||||||| |||||||||||||| ||||||||||||||    
T  48178984 gacaattttagttttctctctttttattggttaaaaataatagagagaaaaa 48179035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 49361755 - 49361833
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataa 128  Q
    |||||||||| ||||||||| || |||| |||||| |||||| || ||||||  |||||||||||| |||| |||||||    
T  49361755 acaacttttgtgacaactttgttattctttcttctcattggtcaataacaatggagagagaaaaaggaagagagaataa 49361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 54379448 - 54379397
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||| || |||||||||||||||||| ||||| ||| ||||||||||    
T  54379448 gacaactttgtttttctctcttcttattggtcaaaaataatggagagaaaaa 54379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 9557850 - 9557900
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaa 102  Q
    |||||||||| ||||| ||| || ||||||||||| |||||||||||||||    
T  9557850 acaacttttgagacaattttgttgttctctcttctcattggttaaaaacaa 9557900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 25559857 - 25559799
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||| |||||| ||||||||||| |||| | ||||||||||||||||    
T  25559857 acaacctttgagacaattttattgttctctcttctcattgatcaaaaacaatagagaga 25559799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 27162377 - 27162447
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||| ||||||||||   |||||||||| | |||| |||| |||||||||||||| ||| ||||||||||    
T  27162377 atttattgacaactttattgacaactttacttttctatctttttattggttaaaaataatggagagaaaaa 27162447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 30400071 - 30400144
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||  || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  30400071 atgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 30400144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 30664627 - 30664581
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    |||||| |||||||| ||||||||||||||||||||| |||| ||||    
T  30664627 tctctttttattggtcaaaaacaatagagagaaaaaggaagagagaa 30664581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 32152019 - 32151989
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagag 109  Q
    |||||||||||||||||||||||||||||||    
T  32152019 tctcttcttattggttaaaaacaatagagag 32151989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 32931836 - 32931894
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  32931836 acaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 32931894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 43149261 - 43149319
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||  ||||| || || |||||||||||||||||| ||||||||| ||||||    
T  43149261 acaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagaga 43149319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 55264965 - 55264907
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||| |||||||||||| |  ||||||||||||||| ||||| |||||||||| ||||    
T  55264965 ttttgggacaactttattgtattctcttcttattggtcaaaaataatagagagataaag 55264907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 23906902 - 23906963
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| ||  | |||||||||||||||||| ||||||||| ||||||    
T  23906902 atgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatggagaga 23906963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 1261304 - 1261363
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    ||||||||| || || |||||||| ||||||||||||||||||  |||||||||| ||||    
T  1261304 gacaactttgttgttttctcttctcattggttaaaaacaatagatagagaaaaaggaaga 1261363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 2280324 - 2280272
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||    
T  2280324 tttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagaga 2280272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 7949930 - 7949871
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||| ||||||||| | |||||||||||| |||  |||||||||||| ||||    
T  7949930 gacaactttatttttctctcttttgattggttaaaaaaaatggagagagaaaaaggaaga 7949871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 9582088 - 9582128
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    |||||| ||||| ||| ||||||||||||||||||||||||    
T  9582088 gacaaccttatttttcactcttcttattggttaaaaacaat 9582128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 12094334 - 12094370
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||||||||  |||||||||||||||||||    
T  12094334 ctctcttcttattggtctaaaacaatagagagaaaaa 12094370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 12762859 - 12762915
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    |||||| ||||  ||||||||| || ||||||||| |||||||| ||||||||||||    
T  12762859 tgacaatttttatgacaactttctttttctctctttttattggtaaaaaacaataga 12762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 20714385 - 20714326
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| ||||| |||| ||||||||||||| |||||||||  |||||||||||| ||||    
T  20714385 gacaaccttatttttctatcttcttattggtcaaaaacaatggagagagaaaaaggaaga 20714326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 28269960 - 28269889
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||||||||||||  || |||| |||| | |||||| |||||||||  |||||||||||| ||||    
T  28269960 gacaacttttgcgacaacttcttttttctatcttttcattggtcaaaaacaatggagagagaaaaaggaaga 28269889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 30633743 - 30633802
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| ||||| |||||||||||||||||| || ||||||  |||||||||||| ||||    
T  30633743 gacaaccttatttttctctcttcttattggtcaagaacaatgaagagagaaaaaggaaga 30633802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 31300985 - 31300897
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||  | ||  |||| ||||||| | ||| ||||||||| || |||| | || |||||||| ||||||||||||||||    
T  31300985 gagtaatgatatttgaacaaccattttatgacaattcttgggacaactttgttgttcttttttgttattggtcaaaaacaatagagaga 31300897  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 36301140 - 36301180
Alignment:
Q  66 aactttattcttctctcttcttattggttaaaaacaataga 106  Q
    |||||| || ||||||||||| |||||||||||||||||||    
T  36301140 aactttgttgttctctcttctcattggttaaaaacaataga 36301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 37215148 - 37215219
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| ||||||||  || ||||||||| | |||||| |||||||||  |||||||||||| ||||    
T  37215148 gacaacttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaaga 37215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 38017862 - 38017894
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagaga 108  Q
    ||||||||||||||||| |||||||||||||||    
T  38017862 ttctctcttcttattggataaaaacaatagaga 38017894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 46323061 - 46323089
Alignment:
Q  80 ctcttcttattggttaaaaacaatagaga 108  Q
    |||||||||||||||||||||||||||||    
T  46323061 ctcttcttattggttaaaaacaatagaga 46323089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 33722138 - 33722043
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||| |||||| |||||||||||||| ||||||| | || || ||||||  || |||||||||||| | ||||| ||||||||||||||    
T  33722138 aaagagtaatggtatttatataattatttaatgtcaactttagtgataattttatttctcactcttcttattgataaaaaataatagagagaaaaa 33722043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 35518428 - 35518370
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||    
T  35518428 acaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaatagagaga 35518370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 20533956 - 20534043
Alignment:
Q  27 atgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||  ||||||||||| |||||||||||| ||||| ||| || || |||||| ||||| ||| |||| ||||||||||||||    
T  20533956 atgatatttttataattatttagtgacaacttttgtgacaattttctttttttctctttttatttgttgaaaataatagagagaaaaa 20534043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 24491595 - 24491665
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    |||||||||| |||||  ||||| ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  24491595 acaacttttgagacaatcttattgttctctcttcttattggttaaaaacaatagaaagagaaaaagaaaga 24491665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 29871264 - 29871331
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| ||||||||||| | ||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  29871264 tatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatggagaga 29871331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 33857379 - 33857312
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| ||||||||| | |||||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  33857379 tatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatggagaga 33857312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 44484566 - 44484644
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  44484566 attttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 44484644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 4432488 - 4432422
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||  | | ||||||| || |||||||||||||||||| ||||||||||||||||    
T  4432488 atttaatgacaacttcagtgtcaactttgtttttctctcttcttattggtcaaaaacaatagagaga 4432422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 43026089 - 43026031
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||||||||||||||||||||    
T  43026089 acaacctttgagacaactttgttgttctctcttctcattggttaaaaacaatagagaga 43026031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 27307160 - 27307221
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  27307160 atgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagaga 27307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 3299014 - 3299093
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| || ||| | |||||  |||||  |||||||||||||||||||||||||||  |||||||||||||||||    
T  3299014 tatttaatgataattttggtgacaatcttatttctctctcttcttattggttaaaaacaatggagagagaaaaagtaaga 3299093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 19631530 - 19631471
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  19631530 gacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaaga 19631471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 19828431 - 19828372
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  19828431 gacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaaga 19828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 34373155 - 34373099
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||| ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  34373155 tttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagagaaaaa 34373099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 36909772 - 36909831
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || |||||||||||||||||| |||||||||  |||||||||||||||||    
T  36909772 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaaga 36909831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 37109314 - 37109358
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  37109314 ttctctcttcttattggtcaaaaacaatagagagaaaaagaaaga 37109358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 14957776 - 14957689
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcg-acaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||| |||||| | || |||||  |||||||||||| | ||||| || | ||||||||||||||||||| ||||||||||||||    
T  14957776 gagtaatgttatttatacaactattttgtgacaacttttggggacaaccttctacttctctcttcttattggtcaaaaacaatagaga 14957689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 25997651 - 25997710
Alignment:
Q  55 acttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||| |||||||||  | ||||||||| |||||||| ||||||||||||||||||||    
T  25997651 acttttgtgacaacttttattttctctctttttattggtcaaaaacaatagagagaaaaa 25997710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 32755833 - 32755758
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    |||||||||||| |||| | ||||| ||||||||| | |||||| |||||||||||||| |||||| |||| ||||    
T  32755833 tgacaacttttgagacagccttatttttctctcttttgattggtcaaaaacaatagagaaaaaaaggaagagagaa 32755758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 9458579 - 9458521
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttct 79  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||| ||||    
T  9458579 agagtaatgatatttgtataaccatttaatgacaatttttgcgacaactttatttttct 9458521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 16463445 - 16463383
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||| |||||  || || | |||||||||||||||| ||||||||||||||||||||    
T  16463445 acaacttttgggacaatcttgttgtgctctcttcttattggtcaaaaacaatagagagaaaaa 16463383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 29168881 - 29168808
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||| |  ||||||  |||||||||||||||||    
T  29168881 atgacaactttggtgacaacattatttttctctcttcttattggtaattaacaatggagagagaaaaagtaaga 29168808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 37966517 - 37966451
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  37966517 atttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 37966451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 23047998 - 23048059
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  23047998 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 23048059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 6885071 - 6885007
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||| ||||||||||| | ||||||||| || ||||||||||||||| || ||||||||| ||||    
T  6885071 atttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatggaga 6885007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 25094499 - 25094447
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| || ||||||||||| |||||| ||||||||||||||||    
T  25094499 tttgagacaactttgttgttctctcttctaattggtcaaaaacaatagagaga 25094447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 38689092 - 38689004
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||  | ||  ||||| ||| || ||||| |||||| || ||  |||||||| |||||||||||||||||||||||||    
T  38689092 gagtaatgatatttgaacaaccatttagtgaaaatttttgggacaaccttctttctctctctttttattggttaaaaacaatagagaga 38689004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 40721924 - 40721872
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaata 104  Q
    ||||| |||| ||||||||| || ||||||||||| |||||||||||||||||    
T  40721924 acaacctttgagacaactttgttgttctctcttctcattggttaaaaacaata 40721872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 8757697 - 8757627
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||  ||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  8757697 acaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagagagaaaaagaaaga 8757627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 13711214 - 13711144
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| ||||||||  || ||||||||| | ||||||||||||||||  |||||||||||| ||||    
T  13711214 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaaga 13711144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 29582309 - 29582352
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    ||||||||| || |||||||||||||||||| ||||||||||||    
T  29582309 gacaactttctttttctctcttcttattggtaaaaaacaataga 29582352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 36383615 - 36383545
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  36383615 acaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 36383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 43791676 - 43791767
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||  | ||   |||| |||||||||||| |||||| |   | ||||||||| |||||||| ||||||||||||||||    
T  43791676 aaagagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtcaaaaacaatagagaga 43791767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 11164294 - 11164352
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||  || ||||||||| | |||||||||||||||| ||||||    
T  11164294 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatggagaga 11164352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 26273327 - 26273269
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||  |||| |  ||||||||||||||| ||||||||||||||||    
T  26273327 acaacttttgggacaaccatattgtgttctcttcttattggtcaaaaacaatagagaga 26273269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 31629732 - 31629694
Alignment:
Q  77 tctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  31629732 tctctcttcttattggataaaaacaatagagagagaaag 31629694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 34141596 - 34141538
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||  |||||||| || |  ||||||||||||||| ||||||||||||||||    
T  34141596 acaacttttggaacaactttgttgtgttctcttcttattggtcaaaaacaatagagaga 34141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 38464589 - 38464504
Alignment:
Q  28 tgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||| |||||| ||||  |||||||||||| || ||||||  | |||||| || |||||||| |||||| |||||||||||||    
T  38464589 tgatatttgcataataatttg-tgacaacttttgtgataactttccttttctctttttttattggtcaaaaactatagagagaaaaa 38464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 39286006 - 39285948
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||  || |||||| || |||||||||||||||||| ||||||    
T  39286006 acaacttttgtgacaacttcttttttctctttttttattggttaaaaacaatggagaga 39285948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 13881248 - 13881191
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    |||||||||| |||||||||||| | ||||||| | |||||| ||||||||| |||||    
T  13881248 acaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaatggagag 13881191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 14021373 - 14021316
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    |||||||||| |||||||||||| | ||||||| | |||||| ||||||||| |||||    
T  14021373 acaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaatggagag 14021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 15019112 - 15019157
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaagaa 121  Q
    ||||||||| |||||||||||||||||| |||||| ||| ||||||    
T  15019112 ttctctctttttattggttaaaaacaatggagagagaaaataagaa 15019157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 39133864 - 39133800
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||| ||| || |||||| || |||||||||||||| |||  ||||||||||||||||||||||    
T  39133864 gacaattttgtttttctctttttttattggttaaaaataatggagagagaaaaagtaagaaagaa 39133800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 5962777 - 5962733
Alignment:
Q  66 aactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||| || |||||||||||||||||| ||||||||| ||||||    
T  5962777 aactttgtttttctctcttcttattggtcaaaaacaatggagaga 5962733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 7497907 - 7497967
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||   |||||||||  | ||||||||||| ||||||| |||||||||||||||    
T  7497907 tgacaactttgttgacaacttttattttctctcttctcattggttcaaaacaatagagaga 7497967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 9377682 - 9377734
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| || |||||||||||||||||| ||||| |||| |||||    
T  9377682 tttgagacaactttgttgttctctcttcttattggtcaaaaagaatatagaga 9377734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 12175236 - 12175308
Alignment:
Q  42 ttatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||| |||||| | ||||||||| || | ||||||| | |||||| |||||||||  |||||||||    
T  12175236 ttatttaatgataactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagaaaaa 12175308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 14151706 - 14151742
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  14151706 ctctcttcttattggataaaaacaatagagaaaaaaa 14151742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 19913926 - 19913867
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || ||||||||| | ||||||||||||||||  |||||||||||| ||||    
T  19913926 gacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaaga 19913867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 30487394 - 30487430
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaa 112  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  30487394 ttctctcttcttattggtcaaaaacaatggagagaaa 30487430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 38598269 - 38598325
Alignment:
Q  54 aacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| |||||| || || |  ||||||||||||||| ||||||||||||||||    
T  38598269 aacttttgtgacaaccttgttgtgttctcttcttattggtcaaaaacaatagagaga 38598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 35616724 - 35616789
Alignment:
Q  57 ttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaa 122  Q
    ||||| |||||| || || |||||||||||||||||| |||||||||||||||| |||||||||||    
T  35616724 ttttgggacaaccttgttgttctctcttcttattggtcaaaaacaatagagagagaaagtaagaaa 35616789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 15917941 - 15917996
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaata 104  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  15917941 atgacaactttagcgacaactttatttctctctcttcttattggtcaaaaacaata 15917996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 125245 - 125183
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||||||||||||  || ||||||||| | |||||| ||||||||||||||||||||    
T  125245 acaacttttgcgacaacttcttttttctctcttttcattggtcaaaaacaatagagagaaaaa 125183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 11306849 - 11306787
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||| ||||||||  || ||||||||| | |||||||||||||||||||||||||||    
T  11306849 acaacttttgagacaacttcttttttctctcttttcattggttaaaaacaatagagagaaaaa 11306787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 12401353 - 12401289
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||| ||||||||||| | |||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  12401353 atttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggaga 12401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 3154528 - 3154619
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||  | | ||| || ||||||| ||| | |||||||||||| ||||||||| ||||| |||||||| ||| ||||||    
T  3154528 aaagagtaatgatatttgtacatttaattgatgacaattttggtgacaactttatttttctctctttttattagttaaaaaaaatggagaga 3154619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 33243661 - 33243739
Alignment:
Q  54 aacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaataaaa 130  Q
    |||||||| ||||| ||  || ||||||||| | ||||||||||||||||  |||||||||||| ||||||||||||||    
T  33243661 aacttttgtgacaatttattttttctctcttttcattggttaaaaacaatggagagagaaaaagaaagaaagaataaaa 33243739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 5005266 - 5005208
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| ||||||||| || ||||||||| | |||||| ||||||||||||||||    
T  5005266 acaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaatagagaga 5005208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 8959316 - 8959243
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| |||||||| || || ||||||||| |||||||| |||||||||  |||||||||||| ||||    
T  8959316 atgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaaagaaaga 8959243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 9594634 - 9594561
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| |||||  ||||||||||||||||| |||||||||  |||||||||||| ||||    
T  9594634 atgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaaga 9594561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 15622200 - 15622127
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  15622200 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 15622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 30574292 - 30574365
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||| ||| | ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  30574292 atgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 30574365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 31625994 - 31626052
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||  |||||||||||| ||||||||||| |||||| ||||| ||||||||||    
T  31625994 acaacttttaagacaactttattgttctctcttctcattggtcaaaaaaaatagagaga 31626052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 33823609 - 33823682
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  33823609 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaaga 33823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 9240303 - 9240214
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| ||||||  | ||||||||  |||||||||||| || || ||| || |||| | || |||||||||||||||||||||||||    
T  9240303 agagtaatcatatttgtacaattatttggtgacaacttttgtgataaatttctttttctttatttttattggttaaaaacaatagagaga 9240214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 22402819 - 22402727
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||||| |||||  || ||| || ||||||| | |||||||||| || ||||||    
T  22402819 gagtaatgatatttgtataattatttgatgacaacttttgtgacaattttatatttttctttttttattgg-tcaaaacaatagtgaaaaaaag 22402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 28501777 - 28501712
Alignment:
Q  45 tttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| |||||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  28501777 tttagtgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 28501712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 36786173 - 36786234
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||| |||||||||  | |||||||||  ||||||| ||||||||||||||||    
T  36786173 atgacaacttttgtgacaactttgcttttctctctttctattggtcaaaaacaatagagaga 36786234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 37821059 - 37821120
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaa 113  Q
    |||||||||| |||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  37821059 acaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaaaa 37821120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 1760548 - 1760456
Alignment:
Q  18 caaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| ||||||||||  |||  |||||| |||||||||| | | ||||  |  | |||||||||||||||||| ||||||||||||||||    
T  1760548 caaagagcaatgatatttgtatatgtatttattgacaactttagtgtcaaccatgcttttctctcttcttattggtcaaaaacaatagagaga 1760456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 2051068 - 2051009
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| || || |||||||||||||||||| |||||||||  |||||||||||||||||    
T  2051068 gacaacattgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaaga 2051009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 14126540 - 14126504
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14126540 tctcttcttattggtcaaaaacaatagagagaaaaag 14126504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 14914512 - 14914453
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || || ||||||||||||||| |||||||||  |||||||||||||||||    
T  14914512 gacaactttgtttttatctcttcttattggtcaaaaacaatggagagagaaaaagtaaga 14914453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 31284312 - 31284394
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagta--agaaagaataaaa 130  Q
    |||||||||||||||||||  ||  |||||||| | ||||||||||||||||  |||||||||||| |  |||||||||||||    
T  31284312 acaacttttgcgacaacttcttttctctctcttttcattggttaaaaacaatggagagagaaaaagaaagagaaagaataaaa 31284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 7077249 - 7077327
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||||||| | ||||||||| || ||||||||| | |||||| ||||| |||  |||||||||||| ||||    
T  7077249 atttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaataatggagagagaaaaaggaaga 7077327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 12417780 - 12417721
Alignment:
Q  51 gacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| | ||||||||| |  |||||||||||| ||||||||||||||| ||||||    
T  12417780 gacaactttggtgacaactttgtgtttctctcttctttttggttaaaaacaatggagaga 12417721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 1108139 - 1108093
Alignment:
Q  64 acaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| || ||||||||||| |||||| ||||||||||||||||    
T  1108139 acaactttgttgttctctcttctcattggtcaaaaacaatagagaga 1108093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 3263423 - 3263496
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| ||||| |||  |||||||||||| ||||    
T  3263423 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagaaaga 3263496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 3518336 - 3518278
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||    
T  3518336 acaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagaga 3518278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 4985492 - 4985458
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||| |||||||||||||||||    
T  4985492 ttctctcttcttattggataaaaacaatagagaga 4985458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 9596729 - 9596802
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||  || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  9596729 atgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 9596802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 12203298 - 12203236
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||| |||||  || || | ||||||||| ||||||||||| |||||||||||||||    
T  12203298 acaacttttgtgacaatcttgttgtcctctcttctcattggttaaaaccaatagagagaaaaa 12203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 12512949 - 12512876
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||  || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  12512949 atgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 12512876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 12612935 - 12612993
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || ||||||||||| |||||| ||||||||| ||||||    
T  12612935 acaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatggagaga 12612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 17489504 - 17489431
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||  || || |||||||||||||||||| |||||||||  ||||||||||| |||||    
T  17489504 atgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaattaaga 17489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 19272015 - 19271942
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||| ||| | || |||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  19272015 atgacaattttagtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 19271942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 31627034 - 31627120
Alignment:
Q  25 taatgatatttacataattatttaatgacaa-cttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||| |||||||||| |||||||  ||||| || || ||| || | ||||||||| ||| |||||||| ||||||||||    
T  31627034 taatgatatttatataattattttatgacaattttttgtgataatttttttttactctcttctaattagttaaaaataatagagaga 31627120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 35358853 - 35358911
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||| |||| ||||||||| || ||||||||||| |||||  ||||||||||||||||    
T  35358853 acaacctttgagacaactttgttgttctctcttctcattggacaaaaacaatagagaga 35358911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 38919999 - 38919937
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||||  |||||| || || ||||||||||| |||||| ||||| ||||||||||||||    
T  38919999 acaacttttaggacaaccttgttgttctctcttctcattggtcaaaaataatagagagaaaaa 38919937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 41210456 - 41210490
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||| ||||||||||||||||    
T  41210456 ttctctcttcttattggtcaaaaacaatagagaga 41210490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 6515381 - 6515418
Alignment:
Q  77 tctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    |||||||| | |||||||||||||||||||||||||||    
T  6515381 tctctcttttcattggttaaaaacaatagagagaaaaa 6515418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 22653788 - 22653731
Alignment:
Q  56 cttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaa 113  Q
    |||||| |||||  ||||| ||||||||||| |||||| ||||| |||||||||||||    
T  22653788 cttttgggacaatcttattgttctctcttctcattggtcaaaaataatagagagaaaa 22653731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 22920407 - 22920468
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| | | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  22920407 atgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 22920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 25345473 - 25345421
Alignment:
Q  70 ttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  25345473 ttatttttctctcttcttattggtcaaaaacaataaagagagaaaaaggaaga 25345421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 43152989 - 43153053
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||| || ||||||||||| |||||| |||||||||  |||||||||||| |||| ||||    
T  43152989 gacaactttgttgttctctcttctcattggtcaaaaacaatggagagagaaaaaggaagagagaa 43153053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 4820284 - 4820252
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||||||||||||| ||||||||||||||    
T  4820284 ttctctcttcttattggtaaaaaacaatagaga 4820252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 5740472 - 5740436
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  5740472 tctcttcttattggataaaaacaatagagagagaaag 5740436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 8955543 - 8955646
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagt 116  Q
    |||||||||||||||||  | ||  |||| |||| |||| ||| |||||| || || |||| | || ||||||||||||||||||||  ||||||||||     
T  8955543 aaagagtaatgatatttgaacaaccatttcatgataactcttgggacaaccttgttgttcttttttgttattggttaaaaacaatagaaagagaaaaagg 8955642  T
Q  117 aaga 120  Q
    ||||    
T  8955643 aaga 8955646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 9599685 - 9599725
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat 103  Q
    |||||||||||| |||||||||||||| ||| |||||||||    
T  9599685 gacaactttatttttctctcttcttatcggtaaaaaacaat 9599725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 10469871 - 10469923
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||| || ||||||||||| |||||| ||||||||| ||||||    
T  10469871 tttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagaga 10469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 28041976 - 28042044
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||||||| |||||| ||||| |||| |||||||| | |||||||||||| || || ||||| ||||    
T  28041976 acaacttttgggacaacattatttttctttcttcttaatagttaaaaacaattgatagcaaaaggaaga 28042044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 39032549 - 39032585
Alignment:
Q  79 tctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  39032549 tctcttcttattggtcaaaaacaatagagagagaaag 39032585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 46844129 - 46844217
Alignment:
Q  22 gagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||  | |  ||||||| ||||||||| | ||||||||| || ||||||||| |||||||||||||||||| ||||||    
T  46844129 gagtaatgatattttgacatctatttaaggacaactttggtgacaactttgtttttctctctttttattggttaaaaacaatggagaga 46844217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 22071640 - 22071593
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  22071640 gacaactttctttttctctcttcttattggttaaaaacaatagagaga 22071593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 8026679 - 8026752
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  8026679 atgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 8026752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 31318890 - 31318844
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  31318890 gacaattttattcttctctcttctcattggttaaaaacaatagagag 31318844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 36728537 - 36728610
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | ||||||||| || |||||||||||||||||| |||||||||  ||||||||||| |||||    
T  36728537 atgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatggagagagaaaaattaaga 36728610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 4949152 - 4949222
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    |||||||||| ||||||||| || |||| |||||| ||||||||||||||||||  |||||||||| ||||    
T  4949152 acaacttttgagacaactttgttgttctttcttctcattggttaaaaacaatagaaagagaaaaaggaaga 4949222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 15638286 - 15638208
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||||| | |||||| || || |||||||||||||||||  |||||||||  ||||||||||||||||| ||||    
T  15638286 atgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatggagagagaaaaagtaagagagaa 15638208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 24235481 - 24235403
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | ||||| |||| | |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  24235481 atttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 24235403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 44368112 - 44368190
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||||||||| | |||||| ||||| ||||||||||||||| || |||||||||  |||||||||||| ||||    
T  44368112 atttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatggagagagaaaaaggaaga 44368190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 49424730 - 49424808
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| |||| |||| | ||||||||| || |||||| |||||||||||||||||||||  |||||||||||| ||||    
T  49424730 atttaaggacagctttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaaga 49424808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 3476053 - 3475963
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||  | ||  |||| |||||||| |||| |||||| ||||| |||| |||| | |||||| ||||||||||||||||    
T  3476053 aagagtaatgatattttgacaaccatttgatgacaacatttgtgacaaccttatttttctttcttttcattggtcaaaaacaatagagaga 3475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 5208242 - 5208315
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  5208242 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 5208315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 19315053 - 19314999
Alignment:
Q  58 tttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaa 112  Q
    |||| ||||||||| || |||| ||||||||||||| ||||||||||||||||||    
T  19315053 tttgtgacaactttctttttctttcttcttattggtcaaaaacaatagagagaaa 19314999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 27001324 - 27001397
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  27001324 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 27001397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 47106067 - 47105994
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  47106067 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaaga 47105994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 13267410 - 13267466
Alignment:
Q  66 aactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| || |||||||||||||||||| |||||||||  |||||||||||||||||    
T  13267410 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagtaaga 13267466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 51377209 - 51377281
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  51377209 tgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 51377281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 13182460 - 13182420
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagt 116  Q
    |||||| || |||||||||||||||||||||||||||||||    
T  13182460 ttctctttttttattggttaaaaacaatagagagaaaaagt 13182420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 21766698 - 21766642
Alignment:
Q  54 aacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| |||||| || || |  ||||||||||||||||||||||||||||||||    
T  21766698 aacttttgggacaaccttgttgtgttctcttcttattggttaaaaacaatagagaga 21766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 29949602 - 29949661
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagtaaga 120  Q
    ||||||||| || |||||||||||||||||| |||||||||||  |||||||||| ||||    
T  29949602 gacaactttctttttctctcttcttattggtaaaaaacaatagatagagaaaaaggaaga 29949661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 41495155 - 41495096
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  41495155 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 41495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 42177980 - 42178024
Alignment:
Q  64 acaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||| || |||||||||||||||||||||||| ||||||||    
T  42177980 acaactttgtttttctctcttcttattggttaaaaataatagaga 42178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42915105 - 42915207
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatag--agagaaaaagt 116  Q
    |||||||| ||||||||  | || ||||| || |||||||||| ||||||||  || ||||||||| | ||||||||||||||||||  ||||||||||     
T  42915105 aaagagtagtgatatttgaacaactatttgat-acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatagaaagagaaaaagg 42915203  T
Q  117 aaga 120  Q
    ||||    
T  42915204 aaga 42915207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 7037399 - 7037477
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||||| | |||||| || || ||||| |||||||||||| |||||||||  |||||||||||| |||| ||||    
T  7037399 atgacaactttagggacaaccttgtttttctcccttcttattggtcaaaaacaatggagagagaaaaaggaagagagaa 7037477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 51691626 - 51691555
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttatt 90  Q
    |||||||||||||||||| | || | ||| ||||||||||||   |||||||| || |||||||||||||||    
T  51691626 aaagagtaatgatatttaaacaactgtttgatgacaacttttataacaactttgtttttctctcttcttatt 51691555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 3223145 - 3223072
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| |||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  3223145 atgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 3223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 6127038 - 6126948
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||  | ||   ||||||||||||||||| |||||| |   | |||||| ||||||||||| || |||||||||||||    
T  6127038 aagagtaatgatatttgaacaaccttttaatgacaacttttgtgacaacctaccttttctcttttcttattggtcaagaacaatagagaga 6126948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 6686175 - 6686141
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||||| ||||||||||||||||    
T  6686175 ttctctcttcttattggtcaaaaacaatagagaga 6686141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 20632563 - 20632636
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||| ||| | |||||||||||| || ||||||| ||||||| |||||||||  ||||||||| |||||||    
T  20632563 atgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatggagagagaaatagtaaga 20632636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 25936396 - 25936323
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| |||||||| |||||  || || |||||| ||||||||||| |||||||||  |||||||||||||||||    
T  25936396 atgataacttttgtgacaatcttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaagtaaga 25936323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 30250216 - 30250270
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaataga 106  Q
    ||||| |||| ||||||||| || ||||||||| |||||||| ||||||||||||    
T  30250216 acaacctttgagacaactttgttgttctctctttttattggtcaaaaacaataga 30250270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 30866511 - 30866441
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||| |||||| | ||||| |||| | ||||||||| ||||| || ||||| ||||||||||||||    
T  30866511 atttaatgataactttggtgacaattttagttttctctctttttattagtcaaaaataatagagagaaaaa 30866441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 36081964 - 36081906
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| ||||| ||||||  ||| |||||| ||||||||||||||||    
T  36081964 acaacttttgggacaaccttattattctcttctctcattggtcaaaaacaatagagaga 36081906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 50291435 - 50291377
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || |  ||||||||||||||| ||||||||||||||||    
T  50291435 acaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagaga 50291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 56025417 - 56025351
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||| | |||||||||  | ||||||||| | |||||| ||||||||| ||||||    
T  56025417 atttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatggagaga 56025351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 20056511 - 20056466
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaagaa 121  Q
    |||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  20056511 ttctctcttcttattggtcaaaaacaattgagagagaaaataagaa 20056466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 30973713 - 30973664
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    ||||||||| ||||||||||||||| || ||||||||||| |||| ||||    
T  30973713 ttctctctttttattggttaaaaactatggagagaaaaagaaagagagaa 30973664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 33484021 - 33484082
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| ||| | |||||||||||||||| | ||||||||| ||||||    
T  33484021 atgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatggagaga 33484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 40258361 - 40258283
Alignment:
Q  45 tttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaagaaagaa 125  Q
    ||||||||||||||| | |||||  || || ||||||||| |||||||||||| |||  |||||||||| |||||| ||||    
T  40258361 tttaatgacaactttggtgacaatcttgtttttctctctttttattggttaaataca--agagagaaaatgtaagagagaa 40258283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 2193751 - 2193794
Alignment:
Q  76 ttctctcttcttattggttaaaaacaat--agagagaaaaagta 117  Q
    |||||||||||||||||| |||||||||  ||||||||||||||    
T  2193751 ttctctcttcttattggtcaaaaacaatggagagagaaaaagta 2193794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 18568730 - 18568801
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaa 118  Q
    ||||||||||| | |||||| ||  | |||| ||||||||||||| |||||||||  |||||||||||||||    
T  18568730 atgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatgaagagagaaaaagtaa 18568801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 18944438 - 18944382
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagaga 108  Q
    |||||||||| |||||| ||||| |  ||||||||||||||| ||||||| ||||||    
T  18944438 acaacttttgggacaaccttattgtgttctcttcttattggtcaaaaacattagaga 18944382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 37732090 - 37732050
Alignment:
Q  64 acaactttattcttctctcttcttattggttaaaaacaata 104  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  37732090 acaactttattgttctctctttttattggtcaaaaacaata 37732050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 43307308 - 43307340
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||| |||||||||||||||||||||||||    
T  43307308 ctctctttttattggttaaaaacaatagagaga 43307340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 51318830 - 51318786
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    |||||| || |||||||||||||||||| ||||||||||| ||||    
T  51318830 ttctctttttttattggttaaaaacaatcgagagaaaaaggaaga 51318786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 237307 - 237374
Alignment:
Q  43 tatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||||| |||| |||| || |||||||||||||||||| ||||| ||| ||||||    
T  237307 tatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaaataatggagaga 237374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 17835773 - 17835695
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| |||||||||   ||||||||| || ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  17835773 atttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaaga 17835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 2881494 - 2881428
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||| | ||||||||| ||  ||||||||||||||||| ||||| ||||||||||    
T  2881494 atttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaaataatagagaga 2881428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6435192 - 6435114
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||| ||| | |||||| || || ||||||||||||||||||||||||||||  | ||||||||||||||| ||||    
T  6435192 atgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatggatagagaaaaagtaagagagaa 6435114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 12441683 - 12441605
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaagaa 125  Q
    ||||||||||| | |||||| ||  | |||||||||||||| |||||||||||||  ||||||||||||||||| ||||    
T  12441683 atgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatggagagagaaaaagtaagagagaa 12441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 15328650 - 15328568
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaaga 124  Q
    |||||||||||||||| | ||||||||| || | ||||||| | |||||| |||||||||  |||||||||||| ||||||||    
T  15328650 atttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaagaaaga 15328568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 7304023 - 7304081
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| | ||| ||||||||||| |||||| ||||||||||||||||    
T  7304023 acaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaatagagaga 7304081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 1804025 - 1803964
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| || || |||||||||||||||||| ||||||||| ||||||    
T  1804025 atgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaga 1803964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 21210398 - 21210339
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||| || || |||||||||||||||| |||||||||||  |||||||||||||||||    
T  21210398 gacaaccttgtttttctctcttcttattgattaaaaacaatggagagagaaaaagtaaga 21210339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 4923107 - 4923025
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaagaaaga 124  Q
    |||| ||||||||||||  || || ||| || |||||||||||||||||||||||| |||  |||||||||||| || |||||    
T  4923107 atttgatgacaacttttatgataattttgtttttctctcttcttattggttaaaaataattgagagagaaaaagaaaaaaaga 4923025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 15364820 - 15364742
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||||||| | ||||||||| || | ||||||| | |||||| |||||||||  |||||||||||| ||||    
T  15364820 atttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaaaggaaga 15364742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25924774 - 25924852
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||||||| | ||||||||| || | ||||||| | |||||| |||||||||  |||||||||||| ||||    
T  25924774 atttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaaga 25924852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 2862233 - 2862167
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||| | ||||| ||| ||  ||||| ||||||||||| ||||| ||||||||||    
T  2862233 atttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaaataatagagaga 2862167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 3339409 - 3339475
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||| ||||||||||| | |||||  || || ||||||||| |||||||| ||||||||||||||||    
T  3339409 atttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaatagagaga 3339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 12151787 - 12151833
Alignment:
Q  64 acaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||| || |||||||||||||||||| ||||||||| ||||||    
T  12151787 acaactttgttgttctctcttcttattggtcaaaaacaatggagaga 12151833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 17442975 - 17442917
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| ||||| |  ||||||||||||| | ||||||||||||||||    
T  17442975 acaacttttgggacaaccttattgtgttctcttcttattgatcaaaaacaatagagaga 17442917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 22422335 - 22422245
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||  | ||||||||    ||||||||||  |||||||| || ||||||||||| ||| || ||||||||| ||||||    
T  22422335 aagagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcattagtcaaaaacaatggagaga 22422245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 24881664 - 24881754
Alignment:
Q  20 aagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||||| | | | |||| ||||||| |||||  ||||  ||||| ||||||||||||||| || ||||| |||| |||||    
T  24881664 aagagtaatgatatttatacagtcatttgatgacaatttttgtaacaatcttatttttctctcttcttattagtcaaaaagaatatagaga 24881754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 31480765 - 31480822
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaaga 120  Q
    ||||||||  || ||||||||| ||||||||||||| |||| ||||||||||| ||||    
T  31480765 gacaacttcttttttctctctttttattggttaaaatcaatggagagaaaaaggaaga 31480822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 3401263 - 3401165
Alignment:
Q  21 agagtaatgatatttacataattatttaatgacaacttttgcgacaa-ctttattcttctctcttcttattggttaaaaacaatagagagaaaaagtaag 119  Q
    |||||||||||||||  | |||||||| || || ||||||| ||||| |||| || |||||| || |||||||| |||||||||| ||| ||||||||||    
T  3401263 agagtaatgatatttgtacaattatttgataacgacttttgtgacaatctttctt-ttctctttt-ttattggtaaaaaacaataaagaaaaaaagtaag 3401166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 3660268 - 3660335
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaa 114  Q
    ||||||||||| | |||||| || || ||||||||| |||||||| |||||||||  |||||||||||    
T  3660268 atgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatgcagagagaaaaa 3660335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 12501612 - 12501557
Alignment:
Q  67 actttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||| || ||||||||||||||| || |||||||||  |||||||||||||||||    
T  12501612 actttgtttttctctcttcttattcgtcaaaaacaatggagagagaaaaagtaaga 12501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 4780 - 4826
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagag 109  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4780 gacaattttattcttctctcttctcattggttaaaaacaatagagag 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Complemental strand, 24815 - 24768
Alignment:
Q  63 gacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  24815 gacaaccttatttttctctcttcttattggttaaaaacaatggagaga 24768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 1411 - 1484
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||| ||| | ||||||||| || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  1411 atgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 17136 - 17070
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||||||||| | ||||||||| ||  |||||||||| |||||| ||||||||| ||||||    
T  17136 atttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatggagaga 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 147171 - 147244
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    ||||||||||| | |||||| || || |||||||||||||||||| |||||||||  |||||||||||| ||||    
T  147171 atgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaaga 147244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 198317 - 198405
Alignment:
Q  19 aaagagtaatgatatttacataattatttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagag 107  Q
    |||||||||||||||||  ||| |||||| ||||| | ||||| || || ||||||  |||||||| | |||| |||||||||||||||    
T  198317 aaagagtaatgatatttgaatatttatttgatgactatttttgtgataattttatttgtctctcttttcattgattaaaaacaatagag 198405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 145200 - 145142
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    |||||||||| |||||| || || |  ||||||||||||||| ||||||||||||||||    
T  145200 acaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagaga 145142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 9591 - 9513
Alignment:
Q  44 atttaatgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||||||||| | ||||||||| || | ||||||| | |||||| |||||||||  |||||||||||| ||||    
T  9591 atttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaaaggaaga 9513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 3096 - 3026
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| |||||||||||| | ||||||| | |||||| |||||||||  |||||||||||| ||||    
T  3096 acaacttttgggacaactttattgtgctctcttttcattggtcaaaaacaatggagagagaaaaaggaaga 3026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 31518 - 31588
Alignment:
Q  52 acaacttttgcgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||| ||||| ||||||||| || ||||||||| | ||||||||||||||||  |||||||||||| ||||    
T  31518 acaatttttgtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaaga 31588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 21444 - 21378
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagagaaaaag 115  Q
    ||||||||| ||| |||||| || ||  ||| |||||||||| ||||||||||||||||| ||||||    
T  21444 atgacaactattgagacaaccttttttctctatcttcttattagttaaaaacaatagagataaaaag 21378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 88270 - 88308
Alignment:
Q  76 ttctctcttcttattggttaaaaacaatagagagaaaaa 114  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  88270 ttctctctttttaatggttaaaaacaatagagagaaaaa 88308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 204363 - 204420
Alignment:
Q  50 tgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagag 107  Q
    |||||||||||| |||||  |  || |||||||||||||||||| |||||||||||||    
T  204363 tgacaacttttgtgacaatctactttttctctcttcttattggtcaaaaacaatagag 204420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 249057 - 249118
Alignment:
Q  49 atgacaacttttgcgacaactttattcttctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||| | |||||| || || |||||||||||||||| | ||||||||| ||||||    
T  249057 atgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagaga 249118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 3602 - 3634
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||| |||||||||||||||||    
T  3602 ctctcttcttattggataaaaacaatagagaga 3634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 6087 - 6119
Alignment:
Q  78 ctctcttcttattggttaaaaacaatagagaga 110  Q
    ||||||||||||||| |||||||||||||||||    
T  6087 ctctcttcttattggataaaaacaatagagaga 6119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 6970 - 6900
Alignment:
Q  52 acaacttttg-cgacaactttattcttctctcttcttattggttaaaaacaat--agagagaaaaagtaaga 120  Q
    |||||||||| |||||||||| |||| ||||||| | ||||||||||||||||  |||||||||||| ||||    
T  6970 acaacttttggcgacaacttttttct-ctctcttttcattggttaaaaacaatggagagagaaaaaggaaga 6900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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