View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3342_low_52 (Length: 289)

Name: NF3342_low_52
Description: NF3342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3342_low_52
NF3342_low_52
[»] chr4 (51 HSPs)
chr4 (1-277)||(2888897-2889173)
chr4 (4-49)||(49041971-49042016)
chr4 (4-49)||(56551582-56551627)
chr4 (9-49)||(11198359-11198399)
chr4 (3-49)||(54294412-54294458)
chr4 (4-49)||(3936653-3936698)
chr4 (4-49)||(7230306-7230351)
chr4 (4-49)||(11949753-11949798)
chr4 (4-49)||(43034332-43034377)
chr4 (4-49)||(43499617-43499662)
chr4 (9-46)||(47814244-47814281)
chr4 (4-49)||(54857605-54857650)
chr4 (9-49)||(10035296-10035336)
chr4 (4-48)||(19479468-19479512)
chr4 (4-48)||(29701114-29701158)
chr4 (4-46)||(6610289-6610331)
chr4 (4-49)||(9946453-9946498)
chr4 (4-49)||(10261759-10261804)
chr4 (12-49)||(11314647-11314684)
chr4 (4-49)||(16733509-16733554)
chr4 (4-49)||(17423167-17423212)
chr4 (4-49)||(19588180-19588225)
chr4 (4-49)||(19908718-19908763)
chr4 (4-49)||(20383514-20383559)
chr4 (4-49)||(20799384-20799429)
chr4 (12-49)||(21114295-21114332)
chr4 (4-49)||(21562651-21562696)
chr4 (4-49)||(24664981-24665026)
chr4 (4-49)||(26926700-26926745)
chr4 (4-37)||(27871380-27871413)
chr4 (4-49)||(28435238-28435283)
chr4 (4-49)||(35287497-35287542)
chr4 (4-37)||(37193275-37193308)
chr4 (4-49)||(37921772-37921817)
chr4 (4-49)||(37930837-37930882)
chr4 (4-49)||(38374983-38375028)
chr4 (4-37)||(42344620-42344653)
chr4 (4-49)||(43330172-43330217)
chr4 (4-41)||(44815967-44816004)
chr4 (4-49)||(48171907-48171952)
chr4 (4-49)||(51450238-51450283)
chr4 (4-40)||(675944-675980)
chr4 (4-40)||(897451-897487)
chr4 (4-48)||(6087773-6087817)
chr4 (4-48)||(16304089-16304133)
chr4 (9-49)||(17729457-17729497)
chr4 (4-48)||(22630351-22630395)
chr4 (9-49)||(23247588-23247628)
chr4 (9-49)||(23304006-23304046)
chr4 (9-49)||(23809980-23810020)
chr4 (4-48)||(43782296-43782340)
[»] chr2 (45 HSPs)
chr2 (1-49)||(27848181-27848229)
chr2 (4-49)||(29544653-29544698)
chr2 (9-49)||(10735821-10735861)
chr2 (4-46)||(42791321-42791363)
chr2 (4-49)||(4138017-4138062)
chr2 (4-49)||(10723965-10724010)
chr2 (4-49)||(20200731-20200776)
chr2 (4-49)||(24592836-24592881)
chr2 (4-49)||(25186232-25186277)
chr2 (4-49)||(26999136-26999181)
chr2 (4-49)||(31815877-31815922)
chr2 (9-49)||(27411123-27411163)
chr2 (9-49)||(35065618-35065658)
chr2 (9-49)||(44810736-44810776)
chr2 (4-46)||(22709111-22709153)
chr2 (4-49)||(2256997-2257042)
chr2 (4-49)||(3708719-3708764)
chr2 (4-45)||(7206151-7206192)
chr2 (4-49)||(9581277-9581321)
chr2 (4-49)||(11868652-11868697)
chr2 (4-49)||(20455917-20455962)
chr2 (4-49)||(20565065-20565110)
chr2 (4-49)||(21482509-21482554)
chr2 (4-49)||(23250310-23250355)
chr2 (4-49)||(24581007-24581052)
chr2 (4-49)||(28771608-28771653)
chr2 (4-41)||(29734717-29734754)
chr2 (4-49)||(31543038-31543083)
chr2 (4-41)||(35281209-35281246)
chr2 (4-49)||(35360045-35360090)
chr2 (4-49)||(35820291-35820336)
chr2 (4-49)||(36359340-36359385)
chr2 (4-49)||(41778934-41778979)
chr2 (4-49)||(44746573-44746618)
chr2 (4-48)||(660813-660857)
chr2 (9-45)||(4927443-4927479)
chr2 (9-49)||(15447704-15447744)
chr2 (9-49)||(16390634-16390674)
chr2 (9-49)||(22061318-22061358)
chr2 (9-49)||(22523002-22523042)
chr2 (4-48)||(34977230-34977274)
chr2 (5-49)||(35581223-35581267)
chr2 (4-48)||(41859878-41859922)
chr2 (9-49)||(42754076-42754116)
chr2 (4-48)||(44526154-44526198)
[»] chr8 (38 HSPs)
chr8 (4-49)||(12748927-12748972)
chr8 (4-49)||(32051522-32051567)
chr8 (4-49)||(444439-444484)
chr8 (4-49)||(8881301-8881346)
chr8 (4-49)||(15020787-15020832)
chr8 (4-49)||(19260569-19260614)
chr8 (4-49)||(24838160-24838205)
chr8 (12-49)||(27587255-27587292)
chr8 (9-49)||(12800890-12800930)
chr8 (9-49)||(30176409-30176449)
chr8 (3-49)||(3650545-3650591)
chr8 (4-49)||(6471537-6471582)
chr8 (4-49)||(9241041-9241086)
chr8 (4-45)||(13124357-13124398)
chr8 (4-49)||(13357431-13357476)
chr8 (4-49)||(15001265-15001310)
chr8 (4-49)||(19163526-19163571)
chr8 (4-49)||(20665353-20665398)
chr8 (4-49)||(22775654-22775699)
chr8 (4-49)||(24023698-24023743)
chr8 (4-49)||(30417600-30417645)
chr8 (4-49)||(30550716-30550761)
chr8 (4-49)||(33105417-33105462)
chr8 (4-49)||(37141383-37141428)
chr8 (8-49)||(40679719-40679760)
chr8 (4-49)||(44215465-44215510)
chr8 (9-49)||(6235541-6235581)
chr8 (9-49)||(7996971-7997011)
chr8 (4-48)||(8717466-8717510)
chr8 (1-49)||(8999881-8999929)
chr8 (4-48)||(11709012-11709056)
chr8 (9-49)||(17898110-17898150)
chr8 (9-49)||(25136834-25136874)
chr8 (4-48)||(26196595-26196639)
chr8 (9-49)||(26932855-26932895)
chr8 (9-49)||(32286354-32286394)
chr8 (8-48)||(32421599-32421638)
chr8 (4-48)||(44084263-44084306)
[»] chr7 (39 HSPs)
chr7 (4-49)||(27462426-27462471)
chr7 (4-49)||(19416540-19416585)
chr7 (9-49)||(2512340-2512380)
chr7 (10-49)||(145550-145589)
chr7 (4-47)||(19599171-19599214)
chr7 (4-46)||(19626518-19626560)
chr7 (4-46)||(46737811-46737853)
chr7 (4-49)||(2916027-2916071)
chr7 (4-49)||(3830094-3830139)
chr7 (4-49)||(8084453-8084498)
chr7 (4-49)||(10244753-10244797)
chr7 (4-49)||(14046601-14046646)
chr7 (4-49)||(14356631-14356676)
chr7 (4-41)||(18714474-18714511)
chr7 (4-49)||(20763180-20763225)
chr7 (4-49)||(21322201-21322246)
chr7 (9-42)||(23147321-23147354)
chr7 (4-49)||(27833391-27833436)
chr7 (4-49)||(29488746-29488791)
chr7 (4-41)||(29726826-29726863)
chr7 (4-49)||(33232387-33232432)
chr7 (4-49)||(34284529-34284574)
chr7 (9-46)||(36121683-36121720)
chr7 (4-41)||(41250045-41250082)
chr7 (4-49)||(42829224-42829269)
chr7 (4-49)||(46987112-46987157)
chr7 (9-49)||(5579724-5579764)
chr7 (4-48)||(8237623-8237667)
chr7 (9-49)||(16577850-16577890)
chr7 (9-49)||(16587772-16587812)
chr7 (4-48)||(17883914-17883958)
chr7 (2-46)||(19988688-19988732)
chr7 (4-40)||(20085758-20085794)
chr7 (13-49)||(28703826-28703862)
chr7 (4-48)||(41029298-41029342)
chr7 (9-49)||(42219377-42219417)
chr7 (9-49)||(42753517-42753557)
chr7 (9-49)||(47607900-47607940)
chr7 (4-48)||(48629056-48629100)
[»] chr6 (27 HSPs)
chr6 (4-49)||(8569735-8569780)
chr6 (4-49)||(12184534-12184579)
chr6 (4-49)||(15187089-15187134)
chr6 (4-49)||(15473472-15473517)
chr6 (4-49)||(26548277-26548322)
chr6 (4-49)||(29740508-29740553)
chr6 (4-48)||(33824907-33824951)
chr6 (4-46)||(655742-655784)
chr6 (4-49)||(247685-247730)
chr6 (4-49)||(2726407-2726452)
chr6 (4-49)||(3808108-3808153)
chr6 (4-49)||(12306347-12306392)
chr6 (4-49)||(13583575-13583620)
chr6 (8-49)||(14610011-14610051)
chr6 (4-49)||(24373700-24373745)
chr6 (4-49)||(27907941-27907986)
chr6 (4-49)||(28231415-28231460)
chr6 (4-45)||(33976270-33976311)
chr6 (4-49)||(34701173-34701218)
chr6 (4-48)||(1130811-1130855)
chr6 (9-49)||(2546211-2546251)
chr6 (9-49)||(4455586-4455626)
chr6 (9-49)||(14296947-14296987)
chr6 (9-49)||(17151267-17151307)
chr6 (9-49)||(21598988-21599028)
chr6 (4-48)||(32053814-32053858)
chr6 (4-48)||(34474253-34474297)
[»] chr5 (34 HSPs)
chr5 (4-49)||(22522791-22522836)
chr5 (4-49)||(40715939-40715984)
chr5 (4-49)||(6489033-6489078)
chr5 (4-49)||(6624802-6624847)
chr5 (4-49)||(27086104-27086149)
chr5 (9-49)||(13864375-13864415)
chr5 (9-49)||(14474865-14474905)
chr5 (10-49)||(4009899-4009938)
chr5 (4-46)||(34191459-34191501)
chr5 (4-46)||(42473920-42473962)
chr5 (4-49)||(3052305-3052350)
chr5 (4-49)||(3445237-3445282)
chr5 (4-49)||(11720920-11720964)
chr5 (4-49)||(16579364-16579409)
chr5 (4-49)||(16701571-16701616)
chr5 (16-49)||(17090904-17090937)
chr5 (4-49)||(18331733-18331778)
chr5 (4-49)||(22665193-22665238)
chr5 (4-49)||(23218986-23219031)
chr5 (4-49)||(26655490-26655535)
chr5 (4-49)||(26927075-26927120)
chr5 (4-49)||(32339761-32339806)
chr5 (4-49)||(34436877-34436922)
chr5 (4-49)||(35412983-35413027)
chr5 (4-49)||(37462137-37462182)
chr5 (4-49)||(37932356-37932401)
chr5 (9-49)||(1538798-1538838)
chr5 (4-48)||(5107236-5107280)
chr5 (9-41)||(20721081-20721113)
chr5 (1-41)||(21139146-21139186)
chr5 (9-49)||(25861937-25861977)
chr5 (4-48)||(25979870-25979914)
chr5 (4-48)||(32200438-32200482)
chr5 (9-49)||(37791153-37791193)
[»] chr3 (40 HSPs)
chr3 (4-49)||(38130949-38130994)
chr3 (4-49)||(48849753-48849798)
chr3 (1-49)||(334837-334885)
chr3 (4-49)||(4601870-4601915)
chr3 (4-49)||(8075811-8075856)
chr3 (4-49)||(25340914-25340959)
chr3 (4-49)||(25441490-25441535)
chr3 (4-49)||(45431974-45432019)
chr3 (9-49)||(11358265-11358305)
chr3 (1-49)||(22251450-22251498)
chr3 (4-48)||(34899123-34899167)
chr3 (9-48)||(45885468-45885507)
chr3 (4-49)||(913590-913635)
chr3 (4-49)||(916465-916510)
chr3 (4-49)||(1456530-1456575)
chr3 (4-49)||(7464481-7464526)
chr3 (4-49)||(8113552-8113597)
chr3 (4-49)||(8238590-8238635)
chr3 (4-49)||(16792964-16793009)
chr3 (4-49)||(22722428-22722473)
chr3 (4-49)||(25727957-25728002)
chr3 (4-49)||(29164743-29164788)
chr3 (4-49)||(29631212-29631257)
chr3 (4-49)||(30050418-30050463)
chr3 (4-49)||(32843252-32843297)
chr3 (4-49)||(38602984-38603029)
chr3 (4-49)||(41817525-41817570)
chr3 (4-49)||(44075146-44075191)
chr3 (4-49)||(48796208-48796253)
chr3 (4-41)||(49082707-49082744)
chr3 (4-49)||(51882190-51882235)
chr3 (12-48)||(5349562-5349598)
chr3 (9-49)||(8136622-8136662)
chr3 (1-37)||(24120422-24120458)
chr3 (1-49)||(25730425-25730473)
chr3 (4-48)||(33771716-33771760)
chr3 (9-49)||(35210121-35210161)
chr3 (9-49)||(35863803-35863843)
chr3 (13-49)||(36623456-36623492)
chr3 (4-48)||(52119402-52119446)
[»] chr1 (37 HSPs)
chr1 (1-49)||(3481584-3481632)
chr1 (4-46)||(2994784-2994826)
chr1 (10-48)||(19795107-19795145)
chr1 (4-49)||(6000133-6000178)
chr1 (12-49)||(6423751-6423788)
chr1 (4-49)||(8736461-8736506)
chr1 (4-49)||(15382809-15382854)
chr1 (4-49)||(17669671-17669716)
chr1 (4-49)||(34521180-34521225)
chr1 (4-49)||(34595898-34595943)
chr1 (4-49)||(34632195-34632240)
chr1 (4-49)||(41973281-41973326)
chr1 (4-49)||(49431983-49432028)
chr1 (9-49)||(8269358-8269398)
chr1 (4-43)||(25532999-25533038)
chr1 (4-46)||(12268977-12269019)
chr1 (4-46)||(32560999-32561041)
chr1 (4-46)||(41763148-41763190)
chr1 (4-49)||(3528459-3528504)
chr1 (4-49)||(5907825-5907870)
chr1 (4-49)||(9265826-9265871)
chr1 (4-49)||(9616879-9616924)
chr1 (4-49)||(16033440-16033485)
chr1 (4-49)||(16966962-16967007)
chr1 (4-49)||(16967184-16967229)
chr1 (4-49)||(17139507-17139552)
chr1 (4-49)||(27533269-27533314)
chr1 (4-49)||(28798739-28798784)
chr1 (9-46)||(32561076-32561113)
chr1 (4-49)||(33020033-33020078)
chr1 (8-49)||(37810517-37810558)
chr1 (4-49)||(41974787-41974832)
chr1 (4-49)||(42045362-42045407)
chr1 (9-49)||(13094060-13094100)
chr1 (9-49)||(39302976-39303016)
chr1 (9-49)||(41884795-41884835)
chr1 (13-49)||(46149034-46149070)
[»] scaffold0262 (1 HSPs)
scaffold0262 (4-49)||(15920-15965)
[»] scaffold1127 (1 HSPs)
scaffold1127 (4-45)||(1159-1200)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-49)||(31912-31957)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-49)||(75351-75396)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-33)||(102100-102132)


Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 2888897 - 2889173
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccacnnnnnnnntaatacggtctagtttacacgattacccctacaccgtaactgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  2888897 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccacaaaaaaaataatacggtctagtttacacgattacccctacaccgtaactgg 2888996  T
Q  101 gggtgttgtgggcgagcgacttgcccacttatcagtaaattacaagtaaactatgagtcatatccaacaatcctaatggatattaataaatcaaattata 200  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2888997 gggtgtggtggacgagcgacttgcccacttatcagtaaattacaagtaaactatgagtcatatccaacaatcctaatggatattaataaatcaaattata 2889096  T
Q  201 atcattatgaatatatcaatagtgctatgcttgcataattgatcatgttaatagaactcactttcttgtcacaggtt 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2889097 atcattatgaatatatcaatagtgctatgcttgcataattgatcatgttaatagaactcactttcttgtcacaggtt 2889173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 49042016 - 49041971
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  49042016 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 49041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 56551627 - 56551582
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  56551627 aatgcataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11198359 - 11198399
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  11198359 ataatatatgcaaggtccggggttcaaaccccggccaccac 11198399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 54294458 - 54294412
Alignment:
Q  3 aaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  54294458 aaatgcataatatatgcaaggtccggggttcaaaccccggacaccac 54294412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 3936653 - 3936698
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||    
T  3936653 aatgcataatatatgcaaggtccggggttcgaaccccggccaccac 3936698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 7230306 - 7230351
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||    
T  7230306 aatgcataatatatgcaaggtccggggttcaaacctcggccaccac 7230351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 11949798 - 11949753
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  11949798 aatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 43034377 - 43034332
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  43034377 aatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 43034332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 43499617 - 43499662
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||    
T  43499617 aatgtataaaatatacaaggtccggggttcaaaccccggccaccac 43499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 47814281 - 47814244
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  47814281 ataatatatgcaaggtccggggttcaaaccccggccac 47814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 54857650 - 54857605
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  54857650 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 54857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 10035296 - 10035336
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  10035296 ataatatatgcaaggtctggggttcaaaccccggccaccac 10035336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 19479512 - 19479468
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||    
T  19479512 aatgcataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 29701114 - 29701158
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||    
T  29701114 aatgtataatatatgcaagttccggggttcaaactccggccacca 29701158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 6610289 - 6610331
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||||||||||||||||||||| | ||||||||||||| ||||    
T  6610289 aatgtataatatatgcaaggtctggggttcaaaccccgaccac 6610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 9946453 - 9946498
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||    
T  9946453 aatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 10261804 - 10261759
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  10261804 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 10261759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 11314684 - 11314647
Alignment:
Q  12 atatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  11314684 atatatgcaaggtccgaggttcaaaccccggacaccac 11314647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16733554 - 16733509
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||||    
T  16733554 aatgtataatatatgcaagatccgaggttcaaccctcggccaccac 16733509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 17423212 - 17423167
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||| || ||||||||    
T  17423212 aatgcataatatatgcaaggtccggggttcaaactccagccaccac 17423167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 19588180 - 19588225
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||  |||||||||||||||||||||    
T  19588180 aatgcataaaatatgcaaggtccagggttcaaaccccggccaccac 19588225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 19908718 - 19908763
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  19908718 aatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 20383514 - 20383559
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||    
T  20383514 aatgcataatatatgcaaggtccggggttcaaaccccatccaccac 20383559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 20799429 - 20799384
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||    
T  20799429 aatgcataatatatgcaaggtccggggttcaaaccctggtcaccac 20799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 21114332 - 21114295
Alignment:
Q  12 atatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  21114332 atatatgcaaggtccggggttcaaaccccgaccaccac 21114295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 21562651 - 21562696
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  21562651 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 21562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24665026 - 24664981
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  24665026 aatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 26926745 - 26926700
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  26926745 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 26926700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 27871413 - 27871380
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaac 37  Q
    |||||||||||||||||||||||| |||||||||    
T  27871413 aatgtataatatatgcaaggtccgaggttcaaac 27871380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 28435283 - 28435238
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || |||||||||||| ||||||||    
T  28435283 aatgcataatatatgcaaggttcggggttcaaaccccagccaccac 28435238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 35287542 - 35287497
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| ||||| |||||||||||||||    
T  35287542 aatgcataaaatatgcaaggtccggggttccaaccccggccaccac 35287497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 37193275 - 37193308
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaac 37  Q
    |||||||||||||||||||||||| |||||||||    
T  37193275 aatgtataatatatgcaaggtccggggttcaaac 37193308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37921772 - 37921817
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| | ||||||||||||| |||||    
T  37921772 aatgcataatatatgcaaggtccgggattcaaaccccggctaccac 37921817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 37930882 - 37930837
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | ||||||||||||| |||||||    
T  37930882 aatgcataatatatgcaaggtctgaggttcaaaccccgaccaccac 37930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 38374983 - 38375028
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||    
T  38374983 aatgcataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 42344653 - 42344620
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaac 37  Q
    |||||||||||||||||||||||| |||||||||    
T  42344653 aatgtataatatatgcaaggtccgaggttcaaac 42344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 43330172 - 43330217
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  43330172 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 43330217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44815967 - 44816004
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  44815967 aatgcataatatatgcaaggtccggggttcaaaccccg 44816004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 48171907 - 48171952
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||||    
T  48171907 aatgtataatatatgcaaggttctaggttcaaaccccgaccaccac 48171952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 51450238 - 51450283
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  51450238 aatgcataagatatgcaaggtccggagttcaaaccccggccaccac 51450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 675944 - 675980
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaacccc 40  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  675944 aatgcataatatatgcaaggtccggggttcaaacccc 675980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 897451 - 897487
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaacccc 40  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  897451 aatgtataatatatgtaaggtccggggttcaaacccc 897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 6087773 - 6087817
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||| | |||||||||||| |||||||    
T  6087773 aatgcataatatatgcaaggtctggggttcaaaccccagccacca 6087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 16304133 - 16304089
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| | |||||||| |||||||||    
T  16304133 aatgcataatatatgcaaggtccgggattcaaaccgcggccacca 16304089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17729457 - 17729497
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  17729457 ataatatatgcaaggtctggggttcaaaccccgaccaccac 17729497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 22630395 - 22630351
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||| | ||||||||||||| ||||||    
T  22630395 aatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23247628 - 23247588
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||| ||||||||||||||||    
T  23247628 ataatatatgcaaggtctggggtttaaaccccggccaccac 23247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23304046 - 23304006
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||| | |||||||||||||||    
T  23304046 ataatatatgcaaggtccggggtgcgaaccccggccaccac 23304006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 23809980 - 23810020
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  23809980 ataatatatgcaaggttcagggttcaaaccccggccaccac 23810020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 43782340 - 43782296
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||| |||||||||||| || ||||||    
T  43782340 aatgcataatatatgcaaggtctgcggttcaaacctcgaccacca 43782296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27848181 - 27848229
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  27848181 acaaatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27848229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29544653 - 29544698
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  29544653 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 29544698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 10735861 - 10735821
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  10735861 ataatatatgcaaggtccggggttcaaaccccggccaccac 10735821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 42791321 - 42791363
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  42791321 aatgcataatatatgcaaggtccggggttcaaaccccggccac 42791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4138017 - 4138062
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  4138017 aatgtataatatatgcaaggtccgagattcaaaccccgaccaccac 4138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 10723965 - 10724010
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  10723965 aatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 10724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 20200731 - 20200776
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||    
T  20200731 aatgcataatatatgcaaggtccagggttcaaaccccggccaccac 20200776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24592881 - 24592836
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  24592881 aatgcataatatatgcaaggtctggggttcaaaccccggccaccac 24592836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25186277 - 25186232
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||    
T  25186277 aatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26999136 - 26999181
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||    
T  26999136 aatgcataatatatgcaaggtctgcggttcaaactccggccaccac 26999181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 31815922 - 31815877
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  31815922 aatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 27411123 - 27411163
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  27411123 ataatatatgcaaggtccggggttcgaaccccggccaccac 27411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35065658 - 35065618
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  35065658 ataatatatgcaaggttcgaggttcaaaccccggccaccac 35065618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 44810736 - 44810776
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  44810736 ataatatatgcaaggtccggggttcaaaccccagccaccac 44810776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 22709111 - 22709153
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| |||| |||||||||||||| ||||||||||||||||||    
T  22709111 aatgcataaaatatgcaaggtccggggttcaaaccccggccac 22709153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 2256997 - 2257042
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | ||||| |||||||||||||||    
T  2256997 aatgcataatatatgcaaggtctggggttcgaaccccggccaccac 2257042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 3708719 - 3708764
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  3708719 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 3708764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7206151 - 7206192
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggcca 45  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  7206151 aatgcataatatatgcaaggtccgaggtttaaaccccggcca 7206192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 9581321 - 9581277
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  9581321 aatgaataatatatgcaaggtccg-ggttcaaaccctggccaccac 9581277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 11868697 - 11868652
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  11868697 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 11868652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 20455917 - 20455962
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| || ||||||||||||    
T  20455917 aatgcataatatatgcaaggtccggggttcgaatcccggccaccac 20455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 20565110 - 20565065
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||    
T  20565110 aatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 21482554 - 21482509
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||    
T  21482554 aatgtataatatatgcaaggtccggggtttgaaccccgaccaccac 21482509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 23250355 - 23250310
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||||    
T  23250355 aatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24581052 - 24581007
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||    
T  24581052 aatgcataatatatgcaaggttcgaggttcaaaccccgaccaccac 24581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 28771608 - 28771653
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||||||||| |||||||| ||||||    
T  28771608 aatgcataatatatgcaagatccgcggttcgaaccccggacaccac 28771653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 29734717 - 29734754
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  29734717 aatgcataatatatgcaaggtccgtggttcaaaccccg 29734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 31543038 - 31543083
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||    
T  31543038 aatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 31543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 35281246 - 35281209
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    ||||||||||||||||||||| || |||||||||||||    
T  35281246 aatgtataatatatgcaaggttcgaggttcaaaccccg 35281209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 35360090 - 35360045
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  35360090 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 35360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 35820336 - 35820291
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||| |||||||||||| |||||||||| ||||||||||    
T  35820336 aatgcataatacatgcaaggtccggggttcaaacctcggccaccac 35820291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 36359340 - 36359385
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||  |||||||||    
T  36359340 aatgcataatatatgcaaggtccggggttcaaaccttggccaccac 36359385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 41778979 - 41778934
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| || ||||||||||||    
T  41778979 aatgcataatatatgcaaggtccgaggttcgaatcccggccaccac 41778934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 44746573 - 44746618
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  44746573 aatgtataaaatatgcaaagtccggggttcgaaccccggccaccac 44746618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 660857 - 660813
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||  ||||||||||||| ||||||    
T  660857 aatgcataatatatgcaaggtccagggttcaaaccccgaccacca 660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 4927479 - 4927443
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggcca 45  Q
    |||||||||| |||||||| |||||||||||||||||    
T  4927479 ataatatatgtaaggtccggggttcaaaccccggcca 4927443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 15447744 - 15447704
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  15447744 ataatatatgcaaggtctggagttcaaaccccggccaccac 15447704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16390634 - 16390674
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| ||||| |||||||||||||||    
T  16390634 ataaaatatgcaaggtccggggttcgaaccccggccaccac 16390674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 22061318 - 22061358
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  22061318 ataaaatatgcaaggtccgatgttcaaaccccggccaccac 22061358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 22523042 - 22523002
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || |||||||| ||||||||||||    
T  22523042 ataatatatgcaaggttcgaggttcaaatcccggccaccac 22523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 34977230 - 34977274
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||||||  ||| |||||||||||||||    
T  34977230 aatgcataatatatgcaaggtccggagtttaaaccccggccacca 34977274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 35581267 - 35581223
Alignment:
Q  5 atgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| |||||| |||||| ||||||||||| |||||||||||    
T  35581267 atgtatagtatatgaaaggtctgcggttcaaactccggccaccac 35581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41859878 - 41859922
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||| |||||||||||| | ||||||||||||||||||||    
T  41859878 aatgcataaaatatgcaaggtctggggttcaaaccccggccacca 41859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 42754076 - 42754116
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||| | |||||||||||||    
T  42754076 ataatatatgcaaggtccgaggttcgatccccggccaccac 42754116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 44526154 - 44526198
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||| |||||||||| | ||||||||||||||||||    
T  44526154 aatgcataatatacgcaaggtccgggattcaaaccccggccacca 44526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 12748927 - 12748972
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  12748927 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 12748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 32051567 - 32051522
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  32051567 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 32051522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 444439 - 444484
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||    
T  444439 aatgcataatatatgcaaggtccggggtttaaaccccggccaccac 444484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8881301 - 8881346
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||    
T  8881301 aatgcataatatatgcaaggtccagggttcaaaccccggccaccac 8881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 15020787 - 15020832
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||    
T  15020787 aatgtataatatatgcaagatccggggttcaaaccctggccaccac 15020832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 19260614 - 19260569
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||    
T  19260614 aatgcataatatatgtaaggtccggggttcaaaccccggccaccac 19260569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24838205 - 24838160
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  24838205 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 24838160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 27587255 - 27587292
Alignment:
Q  12 atatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| |||||||||||||||||||||    
T  27587255 atatatgcaaggtccggggttcaaaccccggccaccac 27587292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 12800930 - 12800890
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  12800930 ataatatatgcaaggtccggggttcaaaccccgaccaccac 12800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30176449 - 30176409
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  30176449 ataatatatgcaaggtccggggttcaaaccccggacaccac 30176409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 3650545 - 3650591
Alignment:
Q  3 aaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||    
T  3650545 aaatgcataatatatgtaaggttcggggttcaaaccccggccaccac 3650591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6471537 - 6471582
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||| || || |||||||||||||||||||||    
T  6471537 aatgcataatatatgcaatgttcggggttcaaaccccggccaccac 6471582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 9241041 - 9241086
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||    
T  9241041 aatgcataatatatgtaaggtccgatgttcaaaccccggccaccac 9241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13124398 - 13124357
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggcca 45  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  13124398 aatgcataaaatatgcaaggtccggggttcaaaccccggcca 13124357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 13357476 - 13357431
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || |||||||||| ||||||||||    
T  13357476 aatgcataatatatgcaaggtacgaggttcaaacctcggccaccac 13357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 15001310 - 15001265
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||  |||||||||||||||||||||    
T  15001310 aatgcataaaatatgcaaggtccaaggttcaaaccccggccaccac 15001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 19163571 - 19163526
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  19163571 aatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 20665398 - 20665353
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  20665398 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20665353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22775654 - 22775699
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||| ||||||||||||| ||||||||||| |||||||||    
T  22775654 aatgcataatttatgcaaggtccggggttcaaaccctggccaccac 22775699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24023743 - 24023698
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||| | ||||||||||| ||||||||||||| |||||||    
T  24023743 aatgtataatgtctgcaaggtccggggttcaaaccccgaccaccac 24023698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 30417645 - 30417600
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| ||| || ||||||||||||| |||||||    
T  30417645 aatgtataatatatgcatggttcggggttcaaaccccgtccaccac 30417600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 30550761 - 30550716
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  30550761 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 30550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 33105417 - 33105462
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||| ||| ||||    
T  33105417 aatgcataatatatgcaaggtccggggttcaaaccccagcctccac 33105462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37141383 - 37141428
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || ||||||||| |||||||||||    
T  37141383 aatgcataatatatgcaaggttcggggttcaaactccggccaccac 37141428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 40679760 - 40679719
Alignment:
Q  8 tataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||| |||||||||||||| |||||||||| ||||||||||    
T  40679760 tataaaatatgcaaggtccggggttcaaacctcggccaccac 40679719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 44215510 - 44215465
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  44215510 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 6235581 - 6235541
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||| |||||||| | |||||||||||||||||||    
T  6235581 ataatatatgtaaggtccgggattcaaaccccggccaccac 6235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 7996971 - 7997011
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  7996971 ataatatatgcaaggtctggggttcaaaccccgaccaccac 7997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 8717510 - 8717466
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||| || |||||||||| |||||||||    
T  8717510 aatgcataatatatgcaaggttcggggttcaaacctcggccacca 8717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8999929 - 8999881
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| ||||||||||||| ||||  ||||||||||||| |||||||    
T  8999929 acaaatgcataatatatgcaaagtccagggttcaaaccccgaccaccac 8999881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 11709012 - 11709056
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||||||  |||||||||||| ||||||    
T  11709012 aatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17898110 - 17898150
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  17898110 ataatatatgcaaggtccgggattctaaccccggccaccac 17898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 25136874 - 25136834
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  25136874 ataaaatatgcaaggtccgaggttcaaacctcggccaccac 25136834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 26196639 - 26196595
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||| || ||||||||| ||||||||||    
T  26196639 aatgcataatatatgcaaggttcgtggttcaaactccggccacca 26196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 26932895 - 26932855
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  26932895 ataaaatatgcaaggttcggggttcaaaccccggccaccac 26932855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 32286394 - 32286354
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||| | || |||||||||||||||||||||    
T  32286394 ataatatatgcaagattcggggttcaaaccccggccaccac 32286354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 32421599 - 32421638
Alignment:
Q  8 tataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  32421599 tataatatatgcaaggtccggggttcaaa-cccggccacca 32421638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 44084306 - 44084263
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||    
T  44084306 aatgcataatatatgcaaggtccg-ggttcaaacctcggccacca 44084263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27462471 - 27462426
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  27462471 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 19416540 - 19416585
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  19416540 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 19416585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 2512340 - 2512380
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  2512340 ataatatatgcaaggtacgaggttcaaaccccggccaccac 2512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 145550 - 145589
Alignment:
Q  10 taatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  145550 taatatatgcaaggtccggggttcaaaccccgaccaccac 145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 19599171 - 19599214
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacc 47  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  19599171 aatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 19626560 - 19626518
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||    
T  19626560 aatgcataatatatgcaaggtccggggttcaaacaccggccac 19626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 46737811 - 46737853
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||    
T  46737811 aatgcataatatatgcaaggtccggggttcaaacaccggccac 46737853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 2916027 - 2916071
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||    
T  2916027 aatgtataatatatacaaggtccggggttcaaa-cccggccaccac 2916071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 3830094 - 3830139
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||    
T  3830094 aatgcataatatatgcaaggtccagggttcaaaccccagccaccac 3830139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8084453 - 8084498
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| ||||| |||||||||||||||    
T  8084453 aatgcataaaatatgcaaggtccggggttcgaaccccggccaccac 8084498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 10244753 - 10244797
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||    
T  10244753 aatgcataatatatgcaaggtccggggttcaaa-cccggccaccac 10244797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14046646 - 14046601
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| | || |||||||||||||||||||||    
T  14046646 aatgcataatatatgcaagatacggggttcaaaccccggccaccac 14046601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14356676 - 14356631
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| | || |||||||||||||||||||||    
T  14356676 aatgcataatatatgcaagatacggggttcaaaccccggccaccac 14356631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 18714474 - 18714511
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  18714474 aatgcataatatatgcaaggtccggggttcaaaccccg 18714511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 20763180 - 20763225
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  20763180 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 21322201 - 21322246
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||| ||||||||||||  |||||||||||||||||||||    
T  21322201 aatgcataatgtatgcaaggtccagggttcaaaccccggccaccac 21322246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 23147321 - 23147354
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccgg 42  Q
    ||||||||||||||||||| ||||||||||||||    
T  23147321 ataatatatgcaaggtccggggttcaaaccccgg 23147354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27833436 - 27833391
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| ||||||||||||| |||||||    
T  27833436 aatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 27833391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29488746 - 29488791
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  29488746 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 29488791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 29726826 - 29726863
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    ||||||||||||||||||||| || |||||||||||||    
T  29726826 aatgtataatatatgcaaggttcggggttcaaaccccg 29726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 33232432 - 33232387
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  33232432 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 33232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 34284574 - 34284529
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  34284574 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 34284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 36121683 - 36121720
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  36121683 ataaaatatgcaaggtccggggttcaaaccccggccac 36121720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 41250082 - 41250045
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  41250082 aatgtataatatatgcaaggtccgaggttcaagccccg 41250045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 42829269 - 42829224
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||| ||||||||| |||||||||||    
T  42829269 aatgcataatatatgcaagctccggggttcaaactccggccaccac 42829224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 46987112 - 46987157
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||| ||||||    
T  46987112 aatgcataatatatgcaaggtccggggttcgaaccccggacaccac 46987157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 5579724 - 5579764
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  5579724 ataatatatgcaaggtctggggttcaaaccccgaccaccac 5579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 8237667 - 8237623
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||| ||| ||||| ||||||||||||||||||||    
T  8237667 aatgcataatatatacaaagtccgaggttcaaaccccggccacca 8237623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 16577890 - 16577850
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  16577890 ataatatatgcaaggtctggggttcaaacctcggccaccac 16577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 16587772 - 16587812
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  16587772 ataatatatgcaaggtctggggttcaaacctcggccaccac 16587812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 17883914 - 17883958
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||    
T  17883914 aatgtataatatatgcaaggtcttgggttcaaactccggccacca 17883958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 19988732 - 19988688
Alignment:
Q  2 caaatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||||| ||||||||||||||||||| |||| ||||| |||||||    
T  19988732 caaatgcataatatatgcaaggtccgtggtttaaacctcggccac 19988688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 20085794 - 20085758
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaacccc 40  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  20085794 aatgcataatatatgcaaggtccggggttcaaacccc 20085758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 28703826 - 28703862
Alignment:
Q  13 tatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  28703826 tatatgcaaggtccgaggttcaaactccggccaccac 28703862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41029298 - 41029342
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||||||||||||||||||||||| ||||| || |||| ||||||    
T  41029298 aatgtataatatatgcaaggtccggggttcgaatcccgaccacca 41029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42219417 - 42219377
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||||||||  ||||||||||    
T  42219417 ataatatatgcaaggtccgaggttcaaacatcggccaccac 42219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 42753557 - 42753517
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||||||| || ||||||||    
T  42753557 ataatatatgcaaggtccggggttcaaactccagccaccac 42753517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 47607940 - 47607900
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  47607940 ataatatatgcaaggtccagggttcaaactccggccaccac 47607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 48629100 - 48629056
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| |||| |||||||| ||||||    
T  48629100 aatgcataatatatgcaaggtccggggtttaaaccccgaccacca 48629056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8569735 - 8569780
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  8569735 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 12184534 - 12184579
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||    
T  12184534 aatgcataatatatgcaaggtccgtggttcaaatcccggccaccac 12184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 15187089 - 15187134
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  15187089 aatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 15473517 - 15473472
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||    
T  15473517 aatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26548277 - 26548322
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||    
T  26548277 aatgtataatatatgcaaggttcggggttcaaaccccagccaccac 26548322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29740508 - 29740553
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||    
T  29740508 aatgcataatatacgcaaggtccggggttcaaaccccggccaccac 29740553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33824907 - 33824951
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||    
T  33824907 aatgcataatatatgcaaggtccggggttcaaacctcggccacca 33824951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 655784 - 655742
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||    
T  655784 aatgcataatatatgcaaggtccggggttcgaaccccggccac 655742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 247685 - 247730
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  247685 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 247730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 2726452 - 2726407
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||| ||||||    
T  2726452 aatgcataatatatgcaaggtccggggttcgaaccccggtcaccac 2726407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 3808153 - 3808108
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| | |||||||||| ||||||||    
T  3808153 aatgcataatatatgcaaggtccgagattcaaaccccagccaccac 3808108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 12306347 - 12306392
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||| | |||||||||||||||||||||    
T  12306347 aatgaataatatatgtaaggtctgaggttcaaaccccggccaccac 12306392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 13583575 - 13583620
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| || | ||||||||||||| |||||||    
T  13583575 aatgtataatatatgcaagctcagaggttcaaaccccgaccaccac 13583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 14610011 - 14610051
Alignment:
Q  8 tataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  14610011 tataatatatgtaaggtccg-ggttcaaaccccggccaccac 14610051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24373745 - 24373700
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||| ||||||||    
T  24373745 aatgcataatatatgcaaggtcaggggttcaaaccccagccaccac 24373700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27907986 - 27907941
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||| | |||||||||||||||||||||    
T  27907986 aatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 27907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 28231460 - 28231415
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||| || |||||||||||    
T  28231460 aatgcataatatatgcaaggtccggggttcacactccggccaccac 28231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 33976270 - 33976311
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggcca 45  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  33976270 aatgcataaaatatgcaaggtccggggttcaaaccccggcca 33976311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 34701173 - 34701218
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | ||||||||| |||||||||||    
T  34701173 aatgcataatatatgcaaggtctgaggttcaaactccggccaccac 34701218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1130811 - 1130855
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||||||| ||||||||||||| | | ||||||||||||||||||    
T  1130811 aatgtatagtatatgcaaggtctgagcttcaaaccccggccacca 1130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 2546211 - 2546251
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || ||||||||||||| |||||||    
T  2546211 ataatatatgcaaggtacggggttcaaaccccgaccaccac 2546251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 4455626 - 4455586
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | ||||||||||||| |||||||    
T  4455626 ataatatatgcaaggtctggggttcaaaccccgaccaccac 4455586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 14296987 - 14296947
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  14296987 ataaaatatgtaaggtccggggttcaaaccccggccaccac 14296947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17151267 - 17151307
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  17151267 ataatatatgcaaggtctggggttcaaacctcggccaccac 17151307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 21598988 - 21599028
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || |||| ||||||||||||||||    
T  21598988 ataatatatgcaaggtacggggtttaaaccccggccaccac 21599028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 32053814 - 32053858
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||| || ||||||||| ||||||||||    
T  32053814 aatgcataatatatgcaaggttcgtggttcaaactccggccacca 32053858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 34474253 - 34474297
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||  ||||| ||||||||||||||    
T  34474253 aatgcataatatatgcaaggtccatggttcgaaccccggccacca 34474297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 22522836 - 22522791
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  22522836 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 22522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 40715984 - 40715939
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  40715984 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6489033 - 6489078
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  6489033 aatgcataatatatgcaaggtctggggttcaaaccccggccaccac 6489078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 6624802 - 6624847
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||    
T  6624802 aatgcataatatatgcaaggtccggggttcgaaccccggccaccac 6624847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 27086104 - 27086149
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||    
T  27086104 aatgtataatatatgcaaggtccagggttcaaaccccagccaccac 27086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 13864375 - 13864415
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  13864375 ataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14474865 - 14474905
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  14474865 ataatatatgcaaggtccagggttcaaaccccggccaccac 14474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 4009899 - 4009938
Alignment:
Q  10 taatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  4009899 taatatatgcaagggccggggttcaaaccccggccaccac 4009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 34191459 - 34191501
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| |||| |||||||||||||| ||||||||||||||||||    
T  34191459 aatgcataaaatatgcaaggtccggggttcaaaccccggccac 34191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 42473920 - 42473962
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| |||||||||| |||||||    
T  42473920 aatgcataatatatgcaaggtccggggttcaaaccacggccac 42473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 3052305 - 3052350
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||||| || |||||||||| || |||||||    
T  3052305 aatgtataatatatgcaaggttcgaggttcaaacctcgaccaccac 3052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 3445282 - 3445237
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||| ||||||||||||| |||||||| ||||||||||||    
T  3445282 aatgcataatgtatgcaaggtccggggttcaaatcccggccaccac 3445237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 11720920 - 11720964
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  11720920 aatgcataatatatgcaaggtcgg-ggttcaaaccccggccaccac 11720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16579409 - 16579364
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||| | |||||||    
T  16579409 aatgcataatatatgcaaggtccgtggttcaaaccctgaccaccac 16579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16701616 - 16701571
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| | ||||||||||| |||||||    
T  16701616 aatgaataatatatgcaaggtccgggattcaaaccccgaccaccac 16701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 17090904 - 17090937
Alignment:
Q  16 atgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||| |||||||||||||||||||||    
T  17090904 atgcaaggtccggggttcaaaccccggccaccac 17090937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 18331733 - 18331778
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| ||||||| |||||||||||||    
T  18331733 aatgcataaaatatgcaaggtccggggttcaagccccggccaccac 18331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 22665238 - 22665193
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  22665238 aatgtataaaatatgcaagatccggagttcaaaccccggccaccac 22665193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 23218986 - 23219031
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||| |||||||||||||| |||||||||  ||||||||||    
T  23218986 aatgtataaaatatgcaaggtccgaggttcaaacttcggccaccac 23219031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26655490 - 26655535
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| ||||| |||||||||||||||    
T  26655490 aatgcataatatatgtaaggtccggggttcgaaccccggccaccac 26655535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 26927075 - 26927120
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| ||||| |||||||||||||||    
T  26927075 aatgcataatatatgtaaggtccggggttcgaaccccggccaccac 26927120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 32339761 - 32339806
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| || ||||||||||||    
T  32339761 aatgcataatatatgcaaggtccggggttcgaatcccggccaccac 32339806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 34436877 - 34436922
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||| ||| ||||||||||||| |||||||    
T  34436877 aatgcataatatatgcaagggccggggttcaaaccccgcccaccac 34436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 35412983 - 35413027
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||    
T  35412983 aatgcataatatatgcaaggtccg-ggttcgaaccccggccaccac 35413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37462137 - 37462182
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  37462137 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 37462182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37932356 - 37932401
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  37932356 aatgcataatatatgcaaggtccggggttcgaaccctggccaccac 37932401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 1538838 - 1538798
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||||||| ||| |||||||    
T  1538838 ataatatatgcaaggtccgaggttcaaacgccgaccaccac 1538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 5107280 - 5107236
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| ||||| ||||||| ||||||    
T  5107280 aatgcataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 20721081 - 20721113
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccg 41  Q
    ||||||||||||||||||| |||||||||||||    
T  20721081 ataatatatgcaaggtccggggttcaaaccccg 20721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21139186 - 21139146
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    ||||||| ||||||||||||||||||| |||||||| ||||    
T  21139186 acaaatgcataatatatgcaaggtccggggttcaaaacccg 21139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 25861977 - 25861937
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  25861977 ataatatatgtaaggtccggagttcaaaccccggccaccac 25861937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 25979870 - 25979914
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||| ||||||||||||| |||||||||| |||||||||    
T  25979870 aatgcataatgtatgcaaggtccggggttcaaacctcggccacca 25979914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 32200482 - 32200438
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||||||    
T  32200482 aatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 37791193 - 37791153
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || ||||||||| |||||||||||    
T  37791193 ataatatatgcaaggttcgaggttcaaactccggccaccac 37791153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 38130994 - 38130949
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  38130994 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 38130949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 48849798 - 48849753
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  48849798 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 48849753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 334885 - 334837
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  334885 acaaatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 334837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4601870 - 4601915
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||    
T  4601870 aatgcataataaatgcaaggtccggggttcaaaccccggccaccac 4601915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8075811 - 8075856
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  8075811 aatgcataatatatgcaaggtctgaggttcaaaccccggccaccac 8075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25340959 - 25340914
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  25340959 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 25340914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25441535 - 25441490
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||||||||||||    
T  25441535 aatgcataatatatgcaaggtctggggttcaaaccccggccaccac 25441490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 45431974 - 45432019
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  45431974 aatgcataatatatgcaaggtccggggttcaaaccctggccaccac 45432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 11358265 - 11358305
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  11358265 ataatatatgcaagatccggggttcaaaccccggccaccac 11358305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22251498 - 22251450
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||||||||    
T  22251498 acaaatgcataatatatgcacggtccggggttcgaaccccggccaccac 22251450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 34899123 - 34899167
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||    
T  34899123 aatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 45885507 - 45885468
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  45885507 ataatatatgcaaggtctgaggttcaaaccccggccacca 45885468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 913635 - 913590
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||| | ||||||||    
T  913635 aatgcataatatatgcaaggtccggggttcaaacctctgccaccac 913590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 916465 - 916510
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  916465 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 1456575 - 1456530
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||| | |||||||| | ||||||||||    
T  1456575 aatgtataatatatgcaaggtctgaggttcaaaactcggccaccac 1456530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 7464526 - 7464481
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| ||||||||||||| |||||||    
T  7464526 aatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 8113597 - 8113552
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||||||||| || ||||||||||||    
T  8113597 aatgcataatatatgcaagatccgcggttcgaatcccggccaccac 8113552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8238590 - 8238635
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | ||||||||| |||||||||||    
T  8238590 aatgcataatatatgcaaggtctggggttcaaactccggccaccac 8238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16793009 - 16792964
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  |||||||||||||| ||||||    
T  16793009 aatgcataatatatgcaaggtccagggttcaaaccccggtcaccac 16792964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22722428 - 22722473
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||    
T  22722428 aatgcataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25728002 - 25727957
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||| |||| |||||||    
T  25728002 aatgcataatatatgcaaggtccggggttcaaatcccgaccaccac 25727957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 29164788 - 29164743
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||| ||| | ||||||||||||| |||||||    
T  29164788 aatgtataatatatgcaaagtctggggttcaaaccccgaccaccac 29164743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29631212 - 29631257
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || | |||||||||||||||||||    
T  29631212 aatgcataatatatgcaaggttcgggattcaaaccccggccaccac 29631257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 30050463 - 30050418
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| | |||||||||||| |||||||||||    
T  30050463 aatgcataatatatgcaagattcgcggttcaaactccggccaccac 30050418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 32843297 - 32843252
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||| | |||||||||||||||||||||    
T  32843297 aatgcataaaatatgcaaggtctggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 38602984 - 38603029
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||    
T  38602984 aatgcataatatatgcaaggttcatggttcaaaccccggccaccac 38603029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41817525 - 41817570
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||  ||||||||    
T  41817525 aatgcataatatatgcaaggtccggggttcaaaccctagccaccac 41817570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 44075191 - 44075146
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||    
T  44075191 aatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 48796253 - 48796208
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| ||||||||||| || |||||||||||||||||||||    
T  48796253 aatgcataagatatgcaaggttcggggttcaaaccccggccaccac 48796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 49082744 - 49082707
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccg 41  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  49082744 aatgtatgatatatgcaaggtccggggttcaaaccccg 49082707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 51882235 - 51882190
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||  |||||||||||||||||||||    
T  51882235 aatgcataatatatgcaagatccagggttcaaaccccggccaccac 51882190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 5349562 - 5349598
Alignment:
Q  12 atatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  5349562 atatatgcaaggtccgaggttcaaaccctggccacca 5349598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8136662 - 8136622
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||  ||||||||||||| |||||||    
T  8136662 ataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24120458 - 24120422
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaac 37  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  24120458 acaaatgcataatatatgcaagatccgcggttcaaac 24120422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25730425 - 25730473
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| ||||||||| ||||||| | ||||| |||||||||||||||    
T  25730425 acaaatgcataatatatacaaggtctggggttcgaaccccggccaccac 25730473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33771716 - 33771760
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    ||||||||||||||||||||||| |||||  || |||||||||||    
T  33771716 aatgtataatatatgcaaggtccacggtttgaatcccggccacca 33771760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35210161 - 35210121
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  35210161 ataaaatatgcaaggtccggggttcaaacctcggccaccac 35210121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35863843 - 35863803
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  35863843 ataatatatgcaaggtctggggttcaaacctcggccaccac 35863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 36623456 - 36623492
Alignment:
Q  13 tatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||  ||||||||||||||||||||    
T  36623456 tatatgcaaggtccggagttcaaaccccggccaccac 36623492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 52119402 - 52119446
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||| |||||||||||||||| || ||||| ||||||||||||||    
T  52119402 aatgcataatatatgcaaggttcggggttcgaaccccggccacca 52119446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3481584 - 3481632
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  3481584 acaaatgcataatatatgcaaggtctggggttcaaaccccggccaccac 3481632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 2994784 - 2994826
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  2994784 aatgtataatatatgcaaggtccggggttcaaaccccgaccac 2994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 19795145 - 19795107
Alignment:
Q  10 taatatatgcaaggtccgcggttcaaaccccggccacca 48  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19795145 taatatatgcaaggtccggggttcaaaccccggccacca 19795107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 6000178 - 6000133
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||    
T  6000178 aatgcataatatatgcaaggtccgaggttcaaaccccggacaccac 6000133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 6423788 - 6423751
Alignment:
Q  12 atatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6423788 atatatgcaaggtccggggttcaaaccccggccaccac 6423751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8736461 - 8736506
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  8736461 aatgcataaaatatgcaaggtccggggttcaaaccccggccaccac 8736506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 15382854 - 15382809
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||    
T  15382854 aatgtataatatatgcaaggtccgaggttcgaaacccggccaccac 15382809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 17669671 - 17669716
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||    
T  17669671 aatgtataatatatgcaaggttcggggttcaaactccggccaccac 17669716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 34521225 - 34521180
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||    
T  34521225 aatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34521180  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 34595898 - 34595943
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||    
T  34595898 aatgcataatatatgcaaggtccggggttcaaacctcggccaccac 34595943  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 34632195 - 34632240
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  34632195 aatgtataatatatgcaagatccgaggttcaaatcccggccaccac 34632240  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41973281 - 41973326
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||    
T  41973281 aatgcataatatatgcaaggtccggggttcgaaccccggccaccac 41973326  T

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Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 49432028 - 49431983
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||    
T  49432028 aatgcataatatatgtaaggtccggggttcaaaccccggccaccac 49431983  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 8269398 - 8269358
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  8269398 ataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

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Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 25532999 - 25533038
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggc 43  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  25532999 aatgcataatatatgcaaggtccggggttcaaaccccggc 25533038  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 12269019 - 12268977
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||    
T  12269019 aatgcataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 32560999 - 32561041
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||||||||||||||||||||||| |||||||| |||| ||||    
T  32560999 aatgtataatatatgcaaggtccggggttcaaatcccgaccac 32561041  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 41763190 - 41763148
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    |||| |||| |||||||||||||| ||||||||||||||||||    
T  41763190 aatgcataaaatatgcaaggtccggggttcaaaccccggccac 41763148  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 3528504 - 3528459
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||| ||||||||  |||||| |||||||||||||    
T  3528504 aatgtataatatatgtaaggtccggtgttcaagccccggccaccac 3528459  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 5907825 - 5907870
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||  |||||||||||||| ||||||    
T  5907825 aatgcataatatatgcaaggtccagggttcaaaccccggacaccac 5907870  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 9265871 - 9265826
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||    
T  9265871 aatgtataatacatgcaaggtctgggattcaaaccccggccaccac 9265826  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 9616924 - 9616879
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||| ||||||||||||||||||| || ||||||||    
T  9616924 aatgcataatatatacaaggtccgcggttcaaactccagccaccac 9616879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16033485 - 16033440
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | ||||||||| |||||||||||    
T  16033485 aatgcataatatatgcaaggtctggggttcaaactccggccaccac 16033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16967007 - 16966962
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || ||||||||| |||||||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16966962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16967229 - 16967184
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || ||||||||| |||||||||||    
T  16967229 aatgcataatatatgcaaggttcgaggttcaaactccggccaccac 16967184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 17139552 - 17139507
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||| ||||||||| ||||||||||||| |||||||    
T  17139552 aatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 27533269 - 27533314
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||||||| || ||||||||||||| |||||||    
T  27533269 aatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 28798784 - 28798739
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||| ||| |||| |||||||||||||| ||||||    
T  28798784 aatgtataatatatgtaagatccgaggttcaaaccccggtcaccac 28798739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 32561076 - 32561113
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccac 46  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  32561076 ataatatatgcaaggcccgaggttcaaaccccggccac 32561113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 33020078 - 33020033
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| | |||||||||||| ||||||||    
T  33020078 aatgcataatatatgcaaggtctgaggttcaaaccccagccaccac 33020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 37810558 - 37810517
Alignment:
Q  8 tataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||||| || ||||||||||| |||||||||    
T  37810558 tataatatatgcaaggtacggggttcaaaccctggccaccac 37810517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41974787 - 41974832
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||  | |||||||||||||||||||||    
T  41974787 aatgcataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 42045407 - 42045362
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||    
T  42045407 aatgcataatatatgcaaggtctggagttcaaaccccggccaccac 42045362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 13094060 - 13094100
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  13094060 ataatatatgcaaggttcgagattcaaaccccggccaccac 13094100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 39302976 - 39303016
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  39302976 ataaaatatgcaaggtcggtggttcaaaccccggccaccac 39303016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 41884835 - 41884795
Alignment:
Q  9 ataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  41884835 ataatatatacaaggtccggggttcgaaccccggccaccac 41884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 46149070 - 46149034
Alignment:
Q  13 tatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    ||||||||||||||  |||||||||||||||||||||    
T  46149070 tatatgcaaggtccaaggttcaaaccccggccaccac 46149034  T

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Target: scaffold0262 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 15965 - 15920
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||    
T  15965 aatgtataatatatgcaaggtctggggttcaaaccccagccaccac 15920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1127 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1200 - 1159
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggcca 45  Q
    |||| ||||||||||||||||||| |||||||||||| ||||    
T  1200 aatgcataatatatgcaaggtccggggttcaaaccccagcca 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 31957 - 31912
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| |||||| || |||||||||||    
T  31957 aatgcataatatatgcaaggtccggggttcacactccggccaccac 31912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 75351 - 75396
Alignment:
Q  4 aatgtataatatatgcaaggtccgcggttcaaaccccggccaccac 49  Q
    |||| ||||||||||||||||||| ||||| || ||||||||||||    
T  75351 aatgcataatatatgcaaggtccggggttcgaatcccggccaccac 75396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 102100 - 102132
Alignment:
Q  1 acaaatgtataatatatgcaaggtccgcggttc 33  Q
    ||||||||||||||||||||||||||| |||||    
T  102100 acaaatgtataatatatgcaaggtccggggttc 102132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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