View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3342_low_71 (Length: 253)

Name: NF3342_low_71
Description: NF3342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3342_low_71
NF3342_low_71
[»] chr1 (10 HSPs)
chr1 (53-241)||(11469081-11469268)
chr1 (53-225)||(14925222-14925390)
chr1 (60-163)||(11469703-11469806)
chr1 (52-163)||(14924673-14924784)
chr1 (52-163)||(31787477-31787588)
chr1 (50-163)||(31788214-31788327)
chr1 (82-159)||(7463444-7463521)
chr1 (82-159)||(11426882-11426959)
chr1 (82-148)||(37889908-37889974)
chr1 (52-153)||(51988411-51988513)
[»] chr8 (13 HSPs)
chr8 (53-241)||(12350512-12350702)
chr8 (53-163)||(12349967-12350077)
chr8 (53-163)||(43924956-43925066)
chr8 (53-159)||(43924490-43924596)
chr8 (52-161)||(43971277-43971386)
chr8 (75-156)||(39257656-39257737)
chr8 (76-163)||(43972024-43972111)
chr8 (83-159)||(38686333-38686409)
chr8 (107-156)||(38687000-38687049)
chr8 (102-159)||(39258391-39258448)
chr8 (53-108)||(32574801-32574856)
chr8 (53-119)||(41348915-41348981)
chr8 (107-159)||(33801553-33801605)
[»] chr4 (22 HSPs)
chr4 (53-241)||(6246784-6246971)
chr4 (53-163)||(6247408-6247519)
chr4 (58-163)||(10421519-10421624)
chr4 (101-225)||(10420965-10421085)
chr4 (57-163)||(15481508-15481614)
chr4 (53-159)||(15481035-15481141)
chr4 (53-159)||(30809447-30809553)
chr4 (52-159)||(45331395-45331502)
chr4 (53-156)||(30808621-30808724)
chr4 (113-159)||(50709719-50709765)
chr4 (53-121)||(232029-232097)
chr4 (67-163)||(6680280-6680376)
chr4 (87-159)||(50710359-50710431)
chr4 (52-99)||(12590205-12590252)
chr4 (60-99)||(47377600-47377639)
chr4 (53-99)||(231436-231482)
chr4 (53-99)||(47376852-47376898)
chr4 (87-156)||(53664246-53664315)
chr4 (67-99)||(36450742-36450774)
chr4 (67-99)||(41261136-41261168)
chr4 (67-159)||(45330579-45330671)
chr4 (107-159)||(53665028-53665080)
[»] scaffold0189 (2 HSPs)
scaffold0189 (53-225)||(12739-12907)
scaffold0189 (53-163)||(12184-12294)
[»] chr3 (6 HSPs)
chr3 (53-163)||(38337415-38337525)
chr3 (53-159)||(38336944-38337048)
chr3 (53-93)||(42108370-42108410)
chr3 (84-146)||(15450256-15450318)
chr3 (67-156)||(55124428-55124517)
chr3 (67-99)||(45501296-45501328)
[»] chr5 (7 HSPs)
chr5 (53-160)||(4554657-4554764)
chr5 (52-225)||(4555269-4555438)
chr5 (67-132)||(26712357-26712422)
chr5 (67-132)||(26982095-26982160)
chr5 (53-163)||(4820454-4820565)
chr5 (76-159)||(6804775-6804858)
chr5 (53-99)||(9142047-9142093)
[»] chr2 (17 HSPs)
chr2 (53-163)||(4993604-4993714)
chr2 (53-163)||(4975696-4975806)
chr2 (69-159)||(37545692-37545782)
chr2 (76-159)||(4976447-4976530)
chr2 (76-159)||(4994354-4994437)
chr2 (53-99)||(41985894-41985940)
chr2 (67-159)||(41519867-41519959)
chr2 (76-159)||(41768685-41768768)
chr2 (112-159)||(42369702-42369749)
chr2 (83-156)||(8536167-8536240)
chr2 (107-159)||(8536828-8536880)
chr2 (67-159)||(42370892-42370984)
chr2 (53-163)||(36718960-36719070)
chr2 (69-121)||(1271247-1271299)
chr2 (67-99)||(2307075-2307107)
chr2 (67-99)||(36390971-36391003)
chr2 (67-99)||(36391674-36391706)
[»] chr6 (3 HSPs)
chr6 (60-163)||(27763420-27763523)
chr6 (53-99)||(24125972-24126018)
chr6 (53-99)||(24126720-24126766)
[»] chr7 (11 HSPs)
chr7 (67-159)||(46757438-46757530)
chr7 (53-159)||(27599211-27599317)
chr7 (52-95)||(46756269-46756312)
chr7 (52-159)||(27600037-27600144)
chr7 (52-163)||(46759200-46759311)
chr7 (67-156)||(12732261-12732350)
chr7 (52-99)||(41533895-41533942)
chr7 (18-50)||(46443958-46443990)
chr7 (52-99)||(45887278-45887325)
chr7 (53-99)||(44909361-44909407)
chr7 (92-156)||(40905070-40905134)
[»] scaffold0071 (1 HSPs)
scaffold0071 (84-146)||(11873-11935)
[»] scaffold0119 (1 HSPs)
scaffold0119 (69-121)||(29938-29990)
[»] scaffold0041 (1 HSPs)
scaffold0041 (92-156)||(44884-44948)


Alignment Details
Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 11469081 - 11469268
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  11469081 ggtggcgtttaatttaggaaagggaagttgtttcccaccatgggaaagctaattttgaccattagataaggtagagaacatacttttatcatagacactc 11469180  T
Q  153 aacaccagattannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctccttttcgtttctgtttctg 241  Q
    |||||||||||          ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  11469181 aacaccagatt-tttttttttcatattggcccaccacttgcagctgtcccaactctcttttctttctctccttctcgtttctgtttctg 11469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 53 - 225
Target Start/End: Complemental strand, 14925390 - 14925222
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  14925390 ggtggcgtttaatttggggaaggaaagttgtttcccaccatgggaaagctaattttgaccattagataaactagagaacatacttttatcatagacactc 14925291  T
Q  153 aacaccagattannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctcctt 225  Q
    |||||||||||          ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  14925290 aacaccagatt----tttttccatattggcccaccacttgcagctgccccaactctcttttctttctctcctt 14925222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 11469806 - 11469703
Alignment:
Q  60 tttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  11469806 tttaatttgggaaagggaagttgtttttcaccatggaaaaactaattttgaccattagataaagtagagaacatacttttatcatagacattcaacacca 11469707  T
Q  160 gatt 163  Q
    ||||    
T  11469706 gatt 11469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 14924673 - 14924784
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| || |  || |||||||| ||||||||||||||||    
T  14924673 gggtggtgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacatatttttatcatagacact 14924772  T
Q  152 caacaccagatt 163  Q
    ||||||||||||    
T  14924773 caacaccagatt 14924784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 31787477 - 31787588
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    |||||||||||| | |||||| |||||||||||| ||||||||| ||| |||||||||| |||||||||| ||| ||||||||||||||||||||| |||    
T  31787477 gggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattagataaagtagagaacatacttttatcatagagact 31787576  T
Q  152 caacaccagatt 163  Q
    ||||| ||||||    
T  31787577 caacatcagatt 31787588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 31788327 - 31788214
Alignment:
Q  50 tcgggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagaca 149  Q
    |||||||  ||||| | |||||| | |||||||||| |||||||||||||  ||||||| | ||||||||||  || |||||||||||||| ||||||||    
T  31788327 tcgggtgaggtttagtatgggaatgagaagttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagaca 31788228  T
Q  150 ctcaacaccagatt 163  Q
    ||||||||||||||    
T  31788227 ctcaacaccagatt 31788214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 7463444 - 7463521
Alignment:
Q  82 gttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||| ||||||||||||| |||||||||| |||||||| |  ||||||||| | |||||||||||||  |||||||||    
T  7463444 gtttcccaccatgggaaagctaattttgaccattagattaaataaagaacacagttttatcatagaccatcaacacca 7463521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 11426882 - 11426959
Alignment:
Q  82 gttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||| ||||||||||||| |||||||||| |||||||| |  ||||||||| | |||||||||||||  |||||||||    
T  11426882 gtttcccaccatgggaaagctaattttgaccattagattaactaaagaacacagttttatcatagaccatcaacacca 11426959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 37889908 - 37889974
Alignment:
Q  82 gttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagac 148  Q
    |||| ||||||||||||| | |||||||| |||||||| |  ||||||||| | |||||||||||||    
T  37889908 gtttcccaccatgggaaagcgaattttgaccattagattaactaaagaacacagttttatcatagac 37889974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 51988513 - 51988411
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa-tctaattttgatcattagataaggtaaagaacatacttttatcatagacac 150  Q
    ||||||| ||||||||||||||||  | || ||||||||||||||||| | |  |||||| |||||||| |  || ||| |||| | |||||||||||||    
T  51988513 gggtggcatttaatttgggaaaggagacttcttttccaccatgggaaagtatttttttgaccattagatcaaatatagatcataatattatcatagacac 51988414  T
Q  151 tca 153  Q
    |||    
T  51988413 tca 51988411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 12350702 - 12350512
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  12350702 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacatacttttatcatagacactc 12350603  T
Q  153 aacaccaga--ttannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctccttttcgtttctgtttctg 241  Q
    |||||||||  ||          ||||||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||    
T  12350602 aacaccagatttttttttttatccatattggcccaccacttgtagctgtcccaactctcttttctttctctccttctcatttctgtttctg 12350512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 12349967 - 12350077
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| | |||||||||| ||||||||||| ||||||||||||||||||    
T  12349967 ggtggcgtttaatttgggaaagggaagttgtttcccaccatggaaaaactaattttaaccattagataaagtaaagaacatgcttttatcatagacactc 12350066  T
Q  153 aacaccagatt 163  Q
    |||||||||||    
T  12350067 aacaccagatt 12350077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 43925066 - 43924956
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||| | |||||| |  || |||||||| |||||||||||||||||    
T  43925066 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacatatttttatcatagacactc 43924967  T
Q  153 aacaccagatt 163  Q
    |||||||||||    
T  43924966 aacaccagatt 43924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 43924490 - 43924596
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||| |  || |||||||| |||||||||| ||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcataaacactc 43924589  T
Q  153 aacacca 159  Q
    |||||||    
T  43924590 aacacca 43924596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 43971277 - 43971386
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    |||||||||||| | ||| || | |||||||||| ||||||||||||| |||||||||| ||||| |||| ||| ||||||||||||||||||||| |||    
T  43971277 gggtggcgtttagtatggaaatgagaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagact 43971376  T
Q  152 caacaccaga 161  Q
    ||||| ||||    
T  43971377 caacatcaga 43971386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 39257656 - 39257737
Alignment:
Q  75 ggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||||| ||||||||||||| |||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||||||    
T  39257656 ggaagttgtttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactcaaca 39257737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 43972111 - 43972024
Alignment:
Q  76 gaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacaccagatt 163  Q
    |||||||||| |||| ||||||||  ||||||| | ||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  43972111 gaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacaccagatt 43972024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 38686333 - 38686409
Alignment:
Q  83 ttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||||||||||   ||| |||| |||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  38686333 ttttccaccatgggaaagtaaatattgaccattagataaagtagagaacatggttttatcatagacactcaacacca 38686409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 38687049 - 38687000
Alignment:
Q  107 ttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||||    
T  38687049 ttgatcattagataaagtagagaacatgattttatcatagacactcaaca 38687000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 39258448 - 39258391
Alignment:
Q  102 taattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||| | ||||||||||  ||||||||||||||||| | ||||||||||||||||    
T  39258448 taattttaaccattagataaactaaagaacatacttttaccgtagacactcaacacca 39258391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 32574856 - 32574801
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaatttt 108  Q
    ||||||||||||| |||||| | |||||||||| ||||||||| ||| ||||||||    
T  32574856 ggtggcgtttaatatgggaatgagaagttgtttcccaccatggtaaagctaatttt 32574801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 41348981 - 41348915
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagat 119  Q
    |||| ||||||||||||||||||  |||| |||||||| ||||||||| |  |||||||| ||||||    
T  41348981 ggtgccgtttaatttgggaaaggctagtttttttccactatgggaaatgtttttttgatcgttagat 41348915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 33801553 - 33801605
Alignment:
Q  107 ttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||| ||||| |||| ||| |||||||  ||||||||||||||||||||||||    
T  33801553 ttgaccattaaataaagtagagaacatggttttatcatagacactcaacacca 33801605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 6246784 - 6246971
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  6246784 ggtggcgtttaatttgggaaagggaaattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacatacttttatcatagacactc 6246883  T
Q  153 aacaccagattannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctccttttcgtttctgtttctg 241  Q
    |||| ||  ||          ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6246884 aacatca-ttttttttttttccatattggcccaccacttgcagctgtcccaactctcttttctttctctccttctcgtttctgtttctg 6246971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 6247519 - 6247408
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatac-ttttatcatagacact 151  Q
    |||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  6247519 ggtggcgtttaatttgggaaagggaagttgtttctcatcatgggaaaactaattttgatcattagataaagtagagaacatactttttatcatagacact 6247420  T
Q  152 caacaccagatt 163  Q
    ||||||||||||    
T  6247419 caacaccagatt 6247408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 10421624 - 10421519
Alignment:
Q  58 cgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacac 157  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |  || |||||||| ||||||||||||||||||||||    
T  10421624 cgtttaatttgggaaagggaagttgttttccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacac 10421525  T
Q  158 cagatt 163  Q
    ||||||    
T  10421524 cagatt 10421519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 10420965 - 10421085
Alignment:
Q  101 ctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacaccagattannnnnnnnncatattggcccaccacttgcagctgtc 200  Q
    |||||||||| ||||||||||  || | |||||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||| |    
T  10420965 ctaattttgaccattagataaactagataacatacttttatcatagacactcaacaccagatt----tttttccatattgacccaccacttgcagctgcc 10421060  T
Q  201 ccaattctcttttctttctctcctt 225  Q
    |||| ||||||||||||||||||||    
T  10421061 ccaactctcttttctttctctcctt 10421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 15481614 - 15481508
Alignment:
Q  57 gcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    |||||||||||| |||||||||||||||| |||| |||||||| |||||||||| |  ||||| |  || |||||||| |||||||||||| ||||||||    
T  15481614 gcgtttaatttgcgaaagggaagttgtttcccacaatgggaaaactaattttgaccggtagattaaatagagaacatatttttatcatagaaactcaaca 15481515  T
Q  157 ccagatt 163  Q
    |||||||    
T  15481514 ccagatt 15481508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 15481035 - 15481141
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||| ||||||||||||| |||||||||||||| ||  ||||||||| |||||||||| | |||||| |  || |||||||| ||||||||||||| |||    
T  15481035 ggtgacgtttaatttggggaagggaagttgtttcccgtcatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagactctc 15481134  T
Q  153 aacacca 159  Q
    |||||||    
T  15481135 aacacca 15481141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 30809553 - 30809447
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| |||||  |||||||||| ||||||||||||||||| ||||  ||| ||||| || ||||| | |||| ||||| | ||||||||||||| |||    
T  30809553 ggtggcatttaaaatgggaaaggggagttgttttccaccatgagaaagttaaatttgaccactagattaagtaatgaacacatttttatcatagactctc 30809454  T
Q  153 aacacca 159  Q
    |||||||    
T  30809453 aacacca 30809447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 45331502 - 45331395
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    ||||||| |||||  || ||||||| |||||||| |||||||| ||||  ||| ||||| |||||||| | |||| ||||| | | ||||||||||||||    
T  45331502 gggtggcatttaaaatgagaaaggggagttgtttcccaccatgagaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacact 45331403  T
Q  152 caacacca 159  Q
    ||||||||    
T  45331402 caacacca 45331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 30808621 - 30808724
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| |||||  |||||||||  |||||||| |||||||||||||  ||| ||||| |||||||| | |||| ||| | | | |||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcatagacactc 30808720  T
Q  153 aaca 156  Q
    ||||    
T  30808721 aaca 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 50709719 - 50709765
Alignment:
Q  113 attagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  50709719 attagataaagtagagaacatagttttatcatagacactcaacacca 50709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 232097 - 232029
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataa 121  Q
    ||||| ||||| | ||||||||||||||||||| |||||||||||||   |||||| | ||||||||||    
T  232097 ggtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagataa 232029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 6680376 - 6680280
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacaccagatt 163  Q
    ||||||||||||   ||||  ||||||||||||   ||| |||| |||||||| | |||||||||||| ||||||||||||  |||||||| |||||    
T  6680376 tgggaaagggaaagagtttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacatagttttatcatagattctcaacactagatt 6680280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 50710431 - 50710359
Alignment:
Q  87 ccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||||||   ||| |||| |||||||||| ||| |||||||   |||||||||||||||||||||||    
T  50710431 ccaccatgggaaagtaaatattgaccattagataaagtagagaacatgaatttatcatagacactcaacacca 50710359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 12590252 - 12590205
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||| |||||||||||||||||  |||| |||||||||||||||||    
T  12590252 gggtggggtttaatttgggaaaggctagtttttttccaccatgggaaa 12590205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 47377639 - 47377600
Alignment:
Q  60 tttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  47377639 tttaatttgggaaaggggagttgtttcccaccatgggaaa 47377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 231436 - 231482
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||| ||||| | ||||||||||||||||||||| |||||||||||    
T  231436 ggtggggtttagtatgggaaagggaagttgttttctaccatgggaaa 231482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 47376852 - 47376898
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||| ||||||||||||||||| |||||||| ||| |||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaa 47376898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 53664246 - 53664315
Alignment:
Q  87 ccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    |||||||||||||   ||| |||| ||||||||||  || |||||||  |||||||||||||||||||||    
T  53664246 ccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactcaaca 53664315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 36450742 - 36450774
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||||||| ||||||||||||||||||||||    
T  36450742 tgggaaaggggagttgttttccaccatgggaaa 36450774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 41261136 - 41261168
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||||||| |||||||||||||||||||||||    
T  41261136 tgggaaaggaaagttgttttccaccatgggaaa 41261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 45330579 - 45330671
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| |||||||| ||||||||| |||  ||| ||||| || ||||| | |||| ||| | | | ||||||||||| ||||||||||    
T  45330579 tgggaaaggggagttgtttcccaccatggaaaagttaaatttgaccactagattaagtaatgaatacattcttatcatagactctcaacacca 45330671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 53665080 - 53665028
Alignment:
Q  107 ttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||| ||||| |||| ||| |||||||  ||||||||||||||||||||||||    
T  53665080 ttgaccattaaataaagtagagaacatggttttatcatagacactcaacacca 53665028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 225
Target Start/End: Complemental strand, 12907 - 12739
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||  ||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  12907 ggtggcgtttaatttggggaagtgaagttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactc 12808  T
Q  153 aacaccagattannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctcctt 225  Q
    |||||||  ||          ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12807 aacaccatttt----tttttccatattggcccaccacttgcagctgccccaactctcttttctttctctcctt 12739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 12184 - 12294
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||  ||||||||| | |||||| |  || |||||||| |||||||||||||||||    
T  12184 ggtggcgtttaatttgggaaagagaagttgtttcccaccatgagaaaattaattttgaccgttagattaaatagagaacatatttttatcatagacactc 12283  T
Q  153 aacaccagatt 163  Q
    |||| ||||||    
T  12284 aacatcagatt 12294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 38337525 - 38337415
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||| |  || |||||||| |||||||||||||||||    
T  38337525 ggtggcgtttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactc 38337426  T
Q  153 aacaccagatt 163  Q
    |||||||||||    
T  38337425 aacaccagatt 38337415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 38336944 - 38337048
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||| | |||||| |  || |||||||| |||||||  ||||||||    
T  38336944 ggtggcatttaatttggggaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatc--agacactc 38337041  T
Q  153 aacacca 159  Q
    |||||||    
T  38337042 aacacca 38337048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 42108370 - 42108410
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccat 93  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  42108370 ggtggcgtttaatttgggaaagggaagttgtttcccaccat 42108410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 15450256 - 15450318
Alignment:
Q  84 tttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatag 146  Q
    ||||||||||||||||  |||| |||| |||||||| | ||| |||||||| |||||||||||    
T  15450256 tttccaccatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 15450318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 55124428 - 55124517
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||||||   |||| |||||||||||||   ||| ||||  ||||||| | |||||||||||| ||||||||||||  |||||||    
T  55124428 tgggaaagggaaagagtttcccaccatgggaaaataaatattgactattagatcatgtaaagaacatagttttatcatagattctcaaca 55124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 45501328 - 45501296
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||||||| ||||||||||||||||||||||    
T  45501328 tgggaaaggggagttgttttccaccatgggaaa 45501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 4554657 - 4554764
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||| ||||| | ||||||||| || ||||||||||||||| |||| |||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  4554657 ggtggggtttagtatgggaaaggaaaattgttttccaccatgagaaagctaattttgaccattagataaagtagagaacatacttttatcatagacactc 4554756  T
Q  153 aacaccag 160  Q
    ||||||||    
T  4554757 aacaccag 4554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 225
Target Start/End: Complemental strand, 4555438 - 4555269
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    ||||||| |||| | ||||||||||||||||||| | ||||||||||| |||||||||| | || ||||| ||  |||||||||||||||| ||||||||    
T  4555438 gggtggcatttagtatgggaaagggaagttgtttcctaccatgggaaagctaattttgaacgttggataaagtggagaacatacttttatcgtagacact 4555339  T
Q  152 caacaccagattannnnnnnnncatattggcccaccacttgcagctgtcccaattctcttttctttctctcctt 225  Q
    |||||||| |||          |||||||||||||| |||||||||||||||| |||||||| ||||| |||||    
T  4555338 caacacca-att---ttttttccatattggcccaccgcttgcagctgtcccaactctcttttatttctttcctt 4555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 26712422 - 26712357
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaaca 132  Q
    ||||||||||||||||||| ||||||||||||| |||||||| | ||| |||| | ||||||||||    
T  26712422 tgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26712357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 26982160 - 26982095
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaaca 132  Q
    ||||||||||||||||||| ||||||||||||| |||||||| | ||| |||| | ||||||||||    
T  26982160 tgggaaagggaagttgtttcccaccatgggaaagctaattttaaccatcagatcaagtaaagaaca 26982095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 4820454 - 4820565
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa-tctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    ||||| ||||||  |||||||||||| |||||||||||||||||||| | |  |||||  ||||||||   ||||  |||||| ||||||||| ||||||    
T  4820454 ggtggggtttaacatgggaaagggaaattgttttccaccatgggaaattttttttttgtccattagattgagtaagaaacataattttatcatggacact 4820553  T
Q  152 caacaccagatt 163  Q
    |||||| |||||    
T  4820554 caacacaagatt 4820565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 6804858 - 6804775
Alignment:
Q  76 gaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| |||||||||||||   |||||||| |||||||| |||||||||||| |   ||||||||| | ||||||||||    
T  6804858 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaacacatagttatcatagtctctcaacacca 6804775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 9142047 - 9142093
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||| |||| | ||||||||||||||||||| |||||||||||||    
T  9142047 ggtggcatttagtatgggaaagggaagttgtttcccaccatgggaaa 9142093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 4993604 - 4993714
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||| | |||||| |||||||||||||||||||||| ||| |||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  4993604 ggtggcgtttagtatgggaatgggaagttgttttccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4993703  T
Q  153 aacaccagatt 163  Q
    |||| ||||||    
T  4993704 aacatcagatt 4993714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 4975696 - 4975806
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| ||| |||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  4975696 ggtggcgtttagtatgggaatgggaagttgtttcccaccatggaaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactc 4975795  T
Q  153 aacaccagatt 163  Q
    |||| ||||||    
T  4975796 aacatcagatt 4975806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 37545692 - 37545782
Alignment:
Q  69 ggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||||||||||||| |||||||||||||  ||| ||||| |||||||| | |||| ||||| | | ||||||||||||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactcaacacca 37545782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 4976530 - 4976447
Alignment:
Q  76 gaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| |||| ||||||||  ||||||| | ||||||||||  || |||||||||||||| ||||||||||||||||||    
T  4976530 gaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacca 4976447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 4994437 - 4994354
Alignment:
Q  76 gaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| |||| ||||||||  ||||||| | ||||||||||  || |||||||||||||| ||||||||||||||||||    
T  4994437 gaagttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacca 4994354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 41985940 - 41985894
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41985940 ggtggcgtttaatttgggaaagggaagttgttttccaccatgagaaa 41985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 41519959 - 41519867
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||||||||||| ||| |||||||||||||  |  |||||| | ||| |||| ||| |||||||||||||| ||||||||| ||||||||    
T  41519959 tgggaaagggaagttttttcccaccatgggaaagttttttttgaccgttaaataaagtagagaacatacttttaccatagacacccaacacca 41519867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 41768768 - 41768685
Alignment:
Q  76 gaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| |||||||||||||   |||||||| |||||||| |||||||||||| |   ||||||||| | ||||||||||    
T  41768768 gaagttgtttcccaccatgggaaagtcaattttgaccattagattaggtaaagaacacatagttatcatagtctctcaacacca 41768685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 42369702 - 42369749
Alignment:
Q  112 cattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  42369702 cattagataaagtagagaacataattttatcatagacactcaacacca 42369749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 8536167 - 8536240
Alignment:
Q  83 ttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    |||||||||||||||||   ||| ||||  ||||||||| ||| |||||||  |||||||||||||||||||||    
T  8536167 ttttccaccatgggaaagtaaatattgacgattagataaagtagagaacatgattttatcatagacactcaaca 8536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 8536880 - 8536828
Alignment:
Q  107 ttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||| |||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  8536880 ttgaccattagataaagtagagaacatggttttatcatagacactcaacacca 8536828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 42370984 - 42370892
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||| || ||||||||| |||||||||||||   ||| |||  |||||||||| ||  |||| ||| ||||||||||||||||| ||||||    
T  42370984 tgggaatggaaagttgtttcccaccatgggaaagtaaatattggccattagataaagtggagaatatagttttatcatagacactcgacacca 42370892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 36719070 - 36718960
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| |||| | ||||||||| || |||||| | ||||| ||||| |||||||| | ||||| || |  |||  ||||||||||||||||||||| |     
T  36719070 ggtggcatttagtatgggaaaggaaacttgtttcctaccataggaaagctaattttaaccattaaattaaataagaaacatacttttatcatagacattg 36718971  T
Q  153 aacaccagatt 163  Q
    ||||| |||||    
T  36718970 aacacaagatt 36718960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 1271247 - 1271299
Alignment:
Q  69 ggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataa 121  Q
    ||||||| |||||||||||||| |||||||| |||||||| | | ||||||||    
T  1271247 ggaaaggaaagttgttttccactatgggaaaactaattttaaccgttagataa 1271299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 2307107 - 2307075
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||||||||||||||||||||||||| ||||    
T  2307107 tgggaaagggaagttgttttccaccatgagaaa 2307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 36390971 - 36391003
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||||||||||||||||| |||||||||||||    
T  36390971 tgggaaagggaagttgtttcccaccatgggaaa 36391003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 36391706 - 36391674
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||||||| ||||||||||||||||||||||    
T  36391706 tgggaaaggggagttgttttccaccatgggaaa 36391674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 27763420 - 27763523
Alignment:
Q  60 tttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    ||||||||||| |||||||||||||| |||||| |||||| |||||||||| | |||||| |  || |||||||| |||||||| |||||||||||||||    
T  27763420 tttaatttggggaagggaagttgtttcccaccaagggaaaactaattttgaccgttagattaaatagagaacatatttttatcaaagacactcaacacca 27763519  T
Q  160 gatt 163  Q
    ||||    
T  27763520 gatt 27763523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 24125972 - 24126018
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaa 24126018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 24126766 - 24126720
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||||| ||||||||||||||||| |||||||| ||| |||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaa 24126720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 46757438 - 46757530
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaacacca 159  Q
    |||||||| | ||||||||||||||||| ||||   ||| |||| |||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  46757438 tgggaaagaggagttgttttccaccatgagaaagtaaatattgaccattagataaagtagagaacataattttatcatagacactcaacacca 46757530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 27599211 - 27599317
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactc 152  Q
    |||||| |||||  |||||||||| |||||||| |||||||||||||  ||| ||||| |||||||| | |||| ||||| | | |||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcatagacactc 27599310  T
Q  153 aacacca 159  Q
    |||||||    
T  27599311 aacacca 27599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 46756269 - 46756312
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgg 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46756269 gggtggcgtttaatttgggaaagggaagttgttttccaccatgg 46756312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 27600144 - 27600037
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    ||||||| |||||  |||||||||| |||||||| |||||||||||||  ||| ||||| || ||||| | |||| ||||| | | ||||||||||| ||    
T  27600144 gggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactct 27600045  T
Q  152 caacacca 159  Q
    ||||||||    
T  27600044 caacacca 27600037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 46759311 - 46759200
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacact 151  Q
    ||||||| |||| | |||||||||| |||||||| ||| ||| | ||| ||||| |||| |||||||||| ||| ||||||||||| ||| ||| | |||    
T  46759311 gggtggcatttagtatgggaaaggggagttgtttcccatcatagcaaagctaatcttgaccattagataaagtagagaacatacttctattatacatact 46759212  T
Q  152 caacaccagatt 163  Q
     |||||||||||    
T  46759211 taacaccagatt 46759200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 12732261 - 12732350
Alignment:
Q  67 tgggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||||||   |||| |||||||||||||   ||| |||| |||||||| | |||||||||||| ||||||||||||| |||||||    
T  12732261 tgggaaagggaaagagtttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacatagttttatcatagactctcaaca 12732350  T

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Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 41533895 - 41533942
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  41533895 gggtgccgtttaatttgggaaaggtaagtttttttccaccatgggaaa 41533942  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 46443990 - 46443958
Alignment:
Q  18 ctaaccgtgtagaaaaactatatactaacactt 50  Q
    |||||||||||||||||||||||||||||||||    
T  46443990 ctaaccgtgtagaaaaactatatactaacactt 46443958  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 45887278 - 45887325
Alignment:
Q  52 gggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||||    
T  45887278 gggtggcgtttaatttgggaaaggctagttttttcccaccatgggaaa 45887325  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 44909407 - 44909361
Alignment:
Q  53 ggtggcgtttaatttgggaaagggaagttgttttccaccatgggaaa 99  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  44909407 ggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaa 44909361  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 40905070 - 40905134
Alignment:
Q  92 atgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||  ||||||||||| |||||| | |||||||||||| ||||| ||| ||| |||||||    
T  40905070 atgggaaagttaattttgatccttagatcaagtaaagaacatatttttaccatggactctcaaca 40905134  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 11935 - 11873
Alignment:
Q  84 tttccaccatgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatag 146  Q
    ||||||||||||||||  |||| |||| |||||||| | ||| |||||||| |||||||||||    
T  11935 tttccaccatgggaaagttaatcttgaccattagattaagtagagaacatatttttatcatag 11873  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 29990 - 29938
Alignment:
Q  69 ggaaagggaagttgttttccaccatgggaaatctaattttgatcattagataa 121  Q
    ||||||| |||||||||||||| |||||||| |||||||| | | ||||||||    
T  29990 ggaaaggaaagttgttttccactatgggaaaactaattttaaccgttagataa 29938  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 44948 - 44884
Alignment:
Q  92 atgggaaatctaattttgatcattagataaggtaaagaacatacttttatcatagacactcaaca 156  Q
    ||||||||  ||||||||||| |||||| | |||||||||||| ||||| ||| ||| |||||||    
T  44948 atgggaaagttaattttgatccttagatcaagtaaagaacatatttttaccatggactctcaaca 44884  T

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