View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3348_high_25 (Length: 208)
Name: NF3348_high_25
Description: NF3348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3348_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 37642959 - 37642775
Alignment:
| Q |
7 |
acatcatcatcatt-gatacggtcaatgtaatgtactataggttttgattcgtatttatttctaactctagagaataaaagaccgtgtatcaaactttaa |
105 |
Q |
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| T |
37642959 |
acatcataatcatttgataaggtcaatgtaatgtactataggttttgattcgtatttatttctaactctagagaataaaagaccgtgtatcaaactccaa |
37642860 |
T |
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| Q |
106 |
tgcaccaaagttcatggataagccacattaggttaaatcagttttatgattttaatgctttctaatattctatcatagtgacaca |
190 |
Q |
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| T |
37642859 |
tgcaccaaagttcatggataagccgcattaggttaaatcagttttatgattttaatgctttctaatattctatcatagtgacaca |
37642775 |
T |
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