View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3350_high_24 (Length: 235)
Name: NF3350_high_24
Description: NF3350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3350_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 4034074 - 4034274
Alignment:
| Q |
22 |
tctaagtgtttgaaaagtcattgccattgaaaaaga-agtttcttgtaagttaaagaattcaaaacacaataagaatcacattgtgtttttcacttgcct |
120 |
Q |
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| T |
4034074 |
tctaagtgtttgaaaagtcattgccattgaaaaagagagtttcttgtaagttaaagaattcaaaacacaataagaatcacattgtgtttctcacttgcct |
4034173 |
T |
|
| Q |
121 |
caatcatctatgacatgactagggatgaaacaaaatatatacatgtgacgcatgtattcatggataaaactcagtagatacaaagacaaggtagcttaac |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
4034174 |
caatcatctatgacatgactagggatgaaacaaaatatatacatgtgacgcatgtatgcatggataaaactcagtagatacaaagacaaggtagcttaac |
4034273 |
T |
|
| Q |
221 |
g |
221 |
Q |
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| T |
4034274 |
g |
4034274 |
T |
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