View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3351_high_22 (Length: 307)
Name: NF3351_high_22
Description: NF3351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3351_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 39945967 - 39946236
Alignment:
| Q |
1 |
cacgaacaaggtgataacataagttgatacaggagattgaaatcagtaacctacatgagaaatacttgcaccattataacacaaagacgaggaaagtata |
100 |
Q |
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| T |
39945967 |
cacgaacaaggtgataaaataagttgatacaggagattgaaatcagtaacctacatgagaaatacttgcaccattataacacaaagacgaggaaagtata |
39946066 |
T |
|
| Q |
101 |
ctaaagcccttttagaaatcacattcagagtgatgatctaagttaaaagtagaaaaggttgcctacagtctacacaacactttcatgaaccaaaaactac |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
39946067 |
ctaaaacccttttagaaatcacattcagagtgatgatctaagttaaaagtagaaaaggttgcctacaggctacacaacactttcatgaaccaaaaactac |
39946166 |
T |
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| Q |
201 |
attggcatatgcccaactccaatcaatttaagcatgatgtgttgaggatatcctttctgaaactcctctg |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39946167 |
attggcatatgcccaactccaatcaatttaagcatgatgtgttgaggatatcctttctgaaactcctctg |
39946236 |
T |
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