View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3351_high_7 (Length: 422)
Name: NF3351_high_7
Description: NF3351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3351_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 71 - 407
Target Start/End: Original strand, 12365098 - 12365434
Alignment:
| Q |
71 |
tattccagaacattccccttttcttcccgatacacctttttatttaccattcatgttaaatccaaatactaaatttactgaaaatcatctttggtatatt |
170 |
Q |
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| T |
12365098 |
tattccagaacaatccccttttcttcccgatacacctttttatttaccattcatgttaaatccaaatgctaaatttactgaaaatcatctttggtatatt |
12365197 |
T |
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| Q |
171 |
tggggtgccaccattttatatattatgcccatctttgtcccaactgaagtaatgtaccagcatctcatgaatcctaagaatcacaagtcattaatctgga |
270 |
Q |
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| T |
12365198 |
tggtgtgccgccattttatatattatgcccatctttgtcccaactgaagcaatgtgccagcatctcatgaatcctaagaatcacaagtcattaatctgga |
12365297 |
T |
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| Q |
271 |
ctgcactcgaatggtactatcctttagaatggtcgagaaacaaacttggaccagtcctaagtgaagtaagaaaatgaagaatggcactagaggctattgg |
370 |
Q |
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| T |
12365298 |
ctgcactcgaatggtactctcctttagaatggtggagaatccaacttggaccagtcctaagtgaagtaagaaaaagaggaatggcaccagaggctattgg |
12365397 |
T |
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| Q |
371 |
caaactcaagacagtcttcattgtgcacagaccatat |
407 |
Q |
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| T |
12365398 |
caaactcaagacagtcttaactgtgcacagaccatat |
12365434 |
T |
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