View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3351_low_1 (Length: 1041)

Name: NF3351_low_1
Description: NF3351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3351_low_1
NF3351_low_1
[»] chr4 (32 HSPs)
chr4 (16-361)||(4534581-4534926)
chr4 (575-667)||(53130855-53130947)
chr4 (555-668)||(54175818-54175928)
chr4 (544-668)||(42314422-42314544)
chr4 (525-668)||(44886126-44886266)
chr4 (586-647)||(4780674-4780735)
chr4 (577-668)||(28137477-28137568)
chr4 (586-668)||(2494077-2494159)
chr4 (575-668)||(36889672-36889765)
chr4 (581-668)||(7238890-7238977)
chr4 (593-664)||(11125271-11125342)
chr4 (553-668)||(19298515-19298630)
chr4 (581-668)||(29618246-29618333)
chr4 (554-668)||(49897353-49897465)
chr4 (856-897)||(4534469-4534510)
chr4 (575-665)||(13222181-13222272)
chr4 (581-667)||(19299939-19300025)
chr4 (581-668)||(41692440-41692527)
chr4 (581-666)||(17554783-17554868)
chr4 (951-995)||(4534078-4534121)
chr4 (581-647)||(11125968-11126034)
chr4 (617-668)||(24739039-24739090)
chr4 (581-668)||(39136056-39136143)
chr4 (604-651)||(40796119-40796166)
chr4 (581-647)||(12928557-12928623)
chr4 (598-668)||(23852500-23852570)
chr4 (544-668)||(29100794-29100919)
chr4 (556-668)||(50715659-50715770)
chr4 (581-642)||(7770253-7770314)
chr4 (582-635)||(32640758-32640811)
chr4 (587-668)||(41104012-41104092)
chr4 (604-649)||(42882071-42882116)
[»] chr7 (38 HSPs)
chr7 (16-200)||(24628700-24628884)
chr7 (593-672)||(26151164-26151243)
chr7 (581-668)||(38319950-38320037)
chr7 (554-663)||(4399640-4399748)
chr7 (575-661)||(11750040-11750126)
chr7 (554-668)||(23640756-23640868)
chr7 (581-668)||(30121917-30122004)
chr7 (581-647)||(10282501-10282567)
chr7 (584-666)||(21696481-21696562)
chr7 (598-668)||(29854700-29854770)
chr7 (581-649)||(33858015-33858083)
chr7 (581-647)||(5801064-5801131)
chr7 (593-668)||(26246627-26246702)
chr7 (581-668)||(26970415-26970502)
chr7 (581-667)||(47222539-47222626)
chr7 (554-647)||(24689321-24689413)
chr7 (552-668)||(24688787-24688901)
chr7 (554-668)||(10283300-10283411)
chr7 (581-668)||(40261915-40262002)
chr7 (581-647)||(24162195-24162261)
chr7 (586-668)||(30121282-30121364)
chr7 (581-647)||(30122184-30122250)
chr7 (585-666)||(45689524-45689604)
chr7 (554-668)||(44434681-44434794)
chr7 (609-668)||(15738914-15738973)
chr7 (583-650)||(18955079-18955146)
chr7 (581-668)||(23808933-23809020)
chr7 (581-668)||(37985984-37986070)
chr7 (598-668)||(4594471-4594541)
chr7 (582-632)||(18984714-18984764)
chr7 (582-632)||(18989529-18989579)
chr7 (582-632)||(18999343-18999393)
chr7 (581-638)||(45883295-45883353)
chr7 (581-647)||(46897946-46898012)
chr7 (581-650)||(10282697-10282766)
chr7 (556-641)||(15641014-15641102)
chr7 (436-505)||(26127866-26127935)
chr7 (595-668)||(26970742-26970815)
[»] chr8 (29 HSPs)
chr8 (581-666)||(342681-342766)
chr8 (555-668)||(1030363-1030474)
chr8 (554-647)||(27882160-27882252)
chr8 (552-668)||(35308135-35308251)
chr8 (581-647)||(13916539-13916605)
chr8 (544-641)||(27917507-27917602)
chr8 (544-641)||(27963926-27964021)
chr8 (554-647)||(28022341-28022432)
chr8 (581-642)||(40737432-40737493)
chr8 (577-665)||(9269264-9269352)
chr8 (544-647)||(15199701-15199802)
chr8 (581-641)||(27881319-27881379)
chr8 (581-641)||(28021500-28021560)
chr8 (555-667)||(28152447-28152558)
chr8 (544-668)||(40796178-40796302)
chr8 (585-668)||(5424487-5424570)
chr8 (593-668)||(339873-339950)
chr8 (581-665)||(45182962-45183043)
chr8 (581-668)||(5424777-5424865)
chr8 (593-668)||(17072978-17073054)
chr8 (593-668)||(17575216-17575292)
chr8 (581-668)||(6007678-6007765)
chr8 (557-647)||(27964799-27964887)
chr8 (605-659)||(32855159-32855214)
chr8 (575-668)||(27882448-27882542)
chr8 (575-668)||(28022628-28022722)
chr8 (593-668)||(5764899-5764974)
chr8 (581-672)||(28828025-28828118)
chr8 (581-642)||(24981514-24981575)
[»] chr5 (26 HSPs)
chr5 (581-666)||(5246520-5246605)
chr5 (575-671)||(19950739-19950835)
chr5 (525-668)||(1349608-1349749)
chr5 (554-668)||(19134739-19134853)
chr5 (576-668)||(6429488-6429581)
chr5 (608-668)||(7293428-7293488)
chr5 (605-668)||(25458525-25458588)
chr5 (581-668)||(34383385-34383472)
chr5 (593-668)||(19135034-19135111)
chr5 (586-647)||(35039752-35039813)
chr5 (553-668)||(28793982-28794095)
chr5 (581-668)||(35040405-35040493)
chr5 (593-664)||(35781387-35781458)
chr5 (581-667)||(2211246-2211332)
chr5 (554-647)||(35040966-35041057)
chr5 (436-505)||(19950609-19950678)
chr5 (576-668)||(20515288-20515381)
chr5 (554-660)||(1349223-1349326)
chr5 (556-647)||(38184275-38184363)
chr5 (556-647)||(38213994-38214082)
chr5 (553-661)||(19170270-19170374)
chr5 (556-633)||(35781642-35781716)
chr5 (434-505)||(36197552-36197623)
chr5 (584-662)||(43582984-43583060)
chr5 (581-647)||(5249356-5249422)
chr5 (581-647)||(35040161-35040227)
[»] chr2 (21 HSPs)
chr2 (581-665)||(43968210-43968294)
chr2 (554-668)||(40662749-40662860)
chr2 (581-641)||(38722854-38722914)
chr2 (554-647)||(7495567-7495657)
chr2 (581-642)||(15458953-15459014)
chr2 (586-647)||(30632215-30632276)
chr2 (581-668)||(1826763-1826850)
chr2 (593-668)||(14787220-14787295)
chr2 (581-668)||(20612701-20612788)
chr2 (581-668)||(39844211-39844298)
chr2 (554-668)||(42676447-42676559)
chr2 (581-647)||(3196998-3197064)
chr2 (581-672)||(3256109-3256202)
chr2 (594-664)||(43968562-43968632)
chr2 (598-668)||(45654955-45655025)
chr2 (527-647)||(7074911-7075028)
chr2 (586-666)||(34454177-34454257)
chr2 (581-640)||(21479216-21479275)
chr2 (581-647)||(21479413-21479480)
chr2 (586-668)||(30668856-30668938)
chr2 (581-650)||(932621-932690)
[»] chr3 (35 HSPs)
chr3 (581-668)||(45586107-45586194)
chr3 (581-664)||(11633071-11633154)
chr3 (581-668)||(40285036-40285123)
chr3 (581-668)||(54356276-54356363)
chr3 (585-659)||(33832809-33832883)
chr3 (583-668)||(30498431-30498516)
chr3 (588-668)||(8708032-8708112)
chr3 (588-668)||(9059919-9059999)
chr3 (581-668)||(10333108-10333195)
chr3 (581-668)||(21388413-21388500)
chr3 (581-668)||(24842475-24842561)
chr3 (593-668)||(47567630-47567705)
chr3 (582-668)||(46515033-46515119)
chr3 (584-664)||(10297423-10297503)
chr3 (581-668)||(1476734-1476821)
chr3 (581-647)||(26167901-26167970)
chr3 (593-668)||(54143012-54143087)
chr3 (553-642)||(3942597-3942684)
chr3 (581-647)||(24485608-24485674)
chr3 (581-646)||(10332700-10332764)
chr3 (583-635)||(3789739-3789791)
chr3 (598-666)||(3827285-3827353)
chr3 (593-665)||(12101080-12101152)
chr3 (586-662)||(55158089-55158165)
chr3 (587-665)||(3781404-3781485)
chr3 (587-665)||(3821408-3821489)
chr3 (581-668)||(26760572-26760659)
chr3 (581-647)||(42583600-42583667)
chr3 (581-668)||(53877648-53877735)
chr3 (576-642)||(54585852-54585919)
chr3 (581-668)||(54981894-54981981)
chr3 (593-635)||(14900369-14900411)
chr3 (434-471)||(35965017-35965054)
chr3 (581-647)||(44077814-44077882)
chr3 (593-638)||(47567781-47567826)
[»] chr1 (28 HSPs)
chr1 (581-665)||(37239078-37239163)
chr1 (554-668)||(42834889-42834999)
chr1 (581-668)||(24686198-24686285)
chr1 (581-663)||(43114750-43114833)
chr1 (581-668)||(33674985-33675072)
chr1 (581-668)||(48738500-48738587)
chr1 (581-647)||(49243784-49243850)
chr1 (584-664)||(6318917-6318997)
chr1 (581-668)||(26271938-26272026)
chr1 (581-668)||(6844468-6844555)
chr1 (581-668)||(17054232-17054319)
chr1 (581-668)||(43325956-43326043)
chr1 (588-639)||(47796300-47796351)
chr1 (610-668)||(45296769-45296827)
chr1 (581-666)||(45807986-45808072)
chr1 (581-668)||(8795376-8795464)
chr1 (576-668)||(43114958-43115050)
chr1 (586-668)||(11981121-11981206)
chr1 (557-668)||(12016825-12016936)
chr1 (625-668)||(46148767-46148810)
chr1 (581-668)||(47795056-47795143)
chr1 (581-668)||(47795433-47795520)
chr1 (581-668)||(47795941-47796028)
chr1 (581-647)||(11981718-11981783)
chr1 (581-650)||(45378342-45378412)
chr1 (604-661)||(47794817-47794874)
chr1 (426-459)||(47795688-47795721)
chr1 (581-642)||(49480266-49480327)
[»] scaffold0224 (1 HSPs)
scaffold0224 (554-668)||(21970-22080)
[»] chr6 (9 HSPs)
chr6 (581-649)||(26001267-26001335)
chr6 (581-668)||(2258700-2258787)
chr6 (592-668)||(7204797-7204873)
chr6 (603-668)||(9740583-9740645)
chr6 (581-668)||(21980914-21981001)
chr6 (524-666)||(33438617-33438755)
chr6 (575-661)||(14094064-14094150)
chr6 (609-668)||(1577403-1577462)
chr6 (581-647)||(10780189-10780255)
[»] scaffold0016 (2 HSPs)
scaffold0016 (581-668)||(205252-205338)
scaffold0016 (588-668)||(106071-106151)
[»] scaffold0024 (1 HSPs)
scaffold0024 (605-668)||(150190-150253)
[»] scaffold0267 (1 HSPs)
scaffold0267 (587-665)||(3243-3325)
[»] scaffold0625 (1 HSPs)
scaffold0625 (582-632)||(7182-7232)


Alignment Details
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 4534926 - 4534581
Alignment:
Q  16 catcacggaatccatttttgggaagaagagagaaagcattggaatggtttaacaactcatcaccaaaagcccagtaaacggcaacagctgaaggaatcgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4534926 catcacggaatccatttttgggaagaagagagaaagcattggaatggtttaacaattcatcaccaaaagcccagtaaacggcaacagctgaaggaatcgt 4534827  T
Q  116 taatgtgaaaacgtacaaagttgccagaaaatatatgtacttgaacttttgaggtttccacattgcatgcataatctctctgcaatgtaaacgtgtgtgt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4534826 taatgtgaaaacgtacaaagttgccagaaaatatatgtacttgaacttttgaggtttccacattgcatgcataatctctctgcaatgcaaacgtgtgtgt 4534727  T
Q  216 atgtcacaatgattgttcactttataggtacaaagataatagcaatgaaaaaggatacattgaaatttctaaaattaggattatggcttcatgaaactag 315  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4534726 atgtcacaataattgttcactttataggtacaaaaataatagcaatgaaaaaggatacattgaaatttctaaaattaggattatggcttaatgaaactag 4534627  T
Q  316 aactgtgtgcagtttgatgacaaaaactaactacacatatactcta 361  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  4534626 aactgtgttcagtttgatgacaaaaactaactacacatatactcta 4534581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 575 - 667
Target Start/End: Complemental strand, 53130947 - 53130855
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcc 667  Q
    ||||| ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||||    
T  53130947 aaaaaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttgacccataatttctctctcc 53130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 555 - 668
Target Start/End: Original strand, 54175818 - 54175928
Alignment:
Q  555 taaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccctt 654  Q
    ||||||||||||||| ||| |||   |||| |||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| |||| | || |    
T  54175818 taaaaatcactttttaaaataaa---taatctagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaaccat 54175914  T
Q  655 attttctctctcct 668  Q
    ||||||||||||||    
T  54175915 attttctctctcct 54175928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 544 - 668
Target Start/End: Complemental strand, 42314544 - 42314422
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttc-aat 642  Q
    |||||| |||||||||||||||| ||  || ||||  ||||||||||| ||||||||| ||||||||||||    ||||| || |||||||||||| |||    
T  42314544 gtttaccttgataaaaatcacttattttaaaaaaa--taatttagtttgtttggatacaactatataaaaggggattttt-ttgcaaaattagttcaaat 42314448  T
Q  643 gttttgacccttattttctctctcct 668  Q
     |||||||||||||||||||||||||    
T  42314447 cttttgacccttattttctctctcct 42314422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 525 - 668
Target Start/End: Original strand, 44886126 - 44886266
Alignment:
Q  525 agaatttattttgagtatggtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagata-tttttt 623  Q
    ||||||||||||| || || |||||  |||||||||| ||||||| ||| |||   ||||||||||| ||||||||| ||||||||||||  | ||||||    
T  44886126 agaatttattttgcgtttg-tttaccgtgataaaaattacttttttaaacaaa---taatttagtttttttggatacaactatataaaagggattttttt 44886221  T
Q  624 attacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
     |||||||||||||||||| |||| |  | |||||||||||||||    
T  44886222 gttacaaaattagttcaatcttttaaatcatattttctctctcct 44886266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 586 - 647
Target Start/End: Complemental strand, 4780735 - 4780674
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  4780735 tagtttgtttggatacaactatataaaagagattttttattacaaaattagttcaatctttt 4780674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 577 - 668
Target Start/End: Complemental strand, 28137568 - 28137477
Alignment:
Q  577 aaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||||||  |||| |||| ||| |||| |||| |||||||||||| |||||| |||||| ||||||||||| |||||| ||||||    
T  28137568 aaattaatttagttagtttgaatacaactgtatagaagagattttttattacgaaattaattcaatcttttgacccttgttttctatctcct 28137477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 586 - 668
Target Start/End: Complemental strand, 2494159 - 2494077
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||||||| |||||| |||| |  | |||||||||||||||    
T  2494159 tagtttgtttggatacaactatataaaagagattttttgttacaaaattaattcaatattttaaatcatattttctctctcct 2494077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 575 - 668
Target Start/End: Complemental strand, 36889765 - 36889672
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||| ||||||||||| ||||||||| ||  |||||||   ||||||| |||||||||||||||||| |||| ||| || |||||||||||||    
T  36889765 aaaaaataatttagtttgtttggatacaacggtataaaaatgattttttgttacaaaattagttcaatcttttaacctttgttttctctctcct 36889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 7238977 - 7238890
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||||| ||||||||||||  | ||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  7238977 taatctagtttgtttggatacaactatataaaagggaatttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 7238890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 593 - 664
Target Start/End: Original strand, 11125271 - 11125342
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    ||||||||| ||||||||||||  ||||||  | |||||||||||||||| |||| ||||||||||||||||    
T  11125271 tttggatacaactatataaaagggatttttagtaacaaaattagttcaatcttttaacccttattttctctc 11125342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 553 - 668
Target Start/End: Complemental strand, 19298630 - 19298515
Alignment:
Q  553 gataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaag--atattttttattacaaaattagttcaatgttttgac 650  Q
    |||||||||||||||||  ||  |||  ||||||||||| |||| |||| ||||||||||||  || |||||| |||||||||||||||||| |||| |     
T  19298630 gataaaaatcactttttttaaacaaa--taatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaaa 19298533  T
Q  651 ccttattttctctctcct 668  Q
     | |||||||||||||||    
T  19298532 tcatattttctctctcct 19298515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 29618246 - 29618333
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||| ||||| ||||||||||| | |||| ||||||||||||||||| ||| ||||||  | |||||||||| ||||    
T  29618246 taatttagtttgtttagatacaactatataaaaaagatttgttattacaaaattagtttaatcttttgaaacctattttctctttcct 29618333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 49897465 - 49897353
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||||||||| |||  |||  |||| |||||| ||||||||| ||||||||||||  ||| ||| |||||||||||||||||| |||| | |      
T  49897465 ataaaaatcactttttaaaaataaa--taatctagtttgtttggatacaactatataaaagggattatttgttacaaaattagttcaatcttttaaacaa 49897368  T
Q  654 tattttctctctcct 668  Q
    ||||||||| |||||    
T  49897367 tattttctccctcct 49897353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 856 - 897
Target Start/End: Complemental strand, 4534510 - 4534469
Alignment:
Q  856 tctgatttttggtcctttaaatattttgcttttcaattttaa 897  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  4534510 tctgatttttggtcctttgaatattttgcttttcaattttaa 4534469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 13222181 - 13222272
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatatttttta-ttacaaaattagttcaatgttttgacccttattttctctct 665  Q
    ||||| ||||||||||| ||| |||||   ||||||||||  |||||||  |||||||||||||||||| |||||| || ||||||||||||    
T  13222181 aaaaaataatttagtttgtttagatacagttatataaaagtgatttttttgttacaaaattagttcaatcttttgatccatattttctctct 13222272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 667
Target Start/End: Original strand, 19299939 - 19300025
Alignment:
Q  581 taatttagtttatttggatactactatataaaa-gatattttttattacaaaattagttcaatgttttgacccttattttctctctcc 667  Q
    |||||||||||  |||||||   |||||||||| ||| ||||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  19299939 taatttagtttgcttggatatagctatataaaatgat-ttttttgctacaaaattagttcaattttttgacccatattttctctctcc 19300025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 41692440 - 41692527
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| | |||||||||   ||||||| ||||||||||| |||||| |||| |  | |||||||||||||||    
T  41692440 taatttagtttgtttggatacaattatataaaaaggattttttgttacaaaattaattcaatcttttaaatcatattttctctctcct 41692527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 581 - 666
Target Start/End: Complemental strand, 17554868 - 17554783
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    ||||||||||| ||| ||||| ||||||||||    |||||||  ||||||||||||| ||| |||||| | ||||||||||||||    
T  17554868 taatttagtttgtttagatacaactatataaatatgattttttgctacaaaattagttaaatattttgatctttattttctctctc 17554783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 951 - 995
Target Start/End: Complemental strand, 4534121 - 4534078
Alignment:
Q  951 taacaatgagtagttgaagaaaacaattagaaacatgagaaagaa 995  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||    
T  4534121 taaccatgagta-ttgaagaaaacaattagaaacatgagaaagaa 4534078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 11125968 - 11126034
Alignment:
Q  581 taatttagtttatttggatactactatataaaaga-tattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| |||| |||| |||| |||||||| |||||||| |||||||||||||||||| ||||    
T  11125968 taatttagtttgtttgaatacaactacataaaagagtatttttt-ttacaaaattagttcaatctttt 11126034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 668
Target Start/End: Complemental strand, 24739090 - 24739039
Alignment:
Q  617 attttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||||||||||||||||||||| |||| | || |||| ||||||||||    
T  24739090 attttttattacaaaattagttcaattttttaaaccatattatctctctcct 24739039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 39136143 - 39136056
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| |||| ||||||||| |||||||||||   ||||||| |||||| |||||||||||  ||| |  | |||||||||||||||    
T  39136143 taattttgtttttttggatacaactatataaaaataattttttgttacaatattagttcaatcgtttaaatcatattttctctctcct 39136056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 651
Target Start/End: Complemental strand, 40796166 - 40796119
Alignment:
Q  604 ctatataaaagatattttttattacaaaattagttcaatgttttgacc 651  Q
    |||||||||||| ||||||| | |||||||||||||||||| ||||||    
T  40796166 ctatataaaagagattttttgtgacaaaattagttcaatgtgttgacc 40796119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 12928557 - 12928623
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| |||||||||  ||||| ||||   ||||||| |||||||||||||||||| ||||    
T  12928557 taatttagtttgtttggatacatctataaaaaaatgattttttgttacaaaattagttcaatctttt 12928623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 598 - 668
Target Start/End: Original strand, 23852500 - 23852570
Alignment:
Q  598 atactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||||| ||||||||| |||| ||||||  ||||| ||||||   ||||||||||||||||    
T  23852500 atacaactatataaaatatattttttgttaccaaattacctcaatattttgatatttattttctctctcct 23852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 544 - 668
Target Start/End: Original strand, 29100794 - 29100919
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatatttttt---attacaaaattagttca 640  Q
    ||||||| | |||||| ||||||||| |||  |||  ||||||||||| ||||||||| |||||||||||   |||||||    ||||||||||||||||    
T  29100794 gtttactgtaataaaactcacttttttaaaacaaa--taatttagtttgtttggatacaactatataaaaataattttttttgtttacaaaattagttca 29100891  T
Q  641 atgttttgacccttattttctctctcct 668  Q
    || |||| |    |||||||||||||||    
T  29100892 atcttttaaattatattttctctctcct 29100919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 668
Target Start/End: Original strand, 50715659 - 50715770
Alignment:
Q  556 aaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatatttttta-ttacaaaattagttcaatgttttgaccctt 654  Q
    ||||||||||||||| ||  |||  ||||||| ||| |||||||||  |||||||||||  |||||||  |||||||||||||||||| |||| |    |    
T  50715659 aaaaatcactttttctaaacaaa--taatttaatttgtttggatacacctatataaaagggatttttttgttacaaaattagttcaatctttttaaatat 50715756  T
Q  655 attttctctctcct 668  Q
    ||||||||||||||    
T  50715757 attttctctctcct 50715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 642
Target Start/End: Complemental strand, 7770314 - 7770253
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    ||||||||||| ||| |||||| || ||||||||  ||||||| ||| ||||||||||||||    
T  7770314 taatttagtttgttttgatactgctgtataaaagcaattttttgttataaaattagttcaat 7770253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 582 - 635
Target Start/End: Complemental strand, 32640811 - 32640758
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaatta 635  Q
    |||||||||| ||||||||| | ||||||||| |  ||||||||||||||||||    
T  32640811 aatttagtttgtttggatacaaatatataaaataatttttttattacaaaatta 32640758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 668
Target Start/End: Original strand, 41104012 - 41104092
Alignment:
Q  587 agtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||| ||||||||||||  | ||||| |||||||||||||||||| |||| |  | |||||||||| ||||    
T  41104012 agtttatttcgatacaactatataaaagg-actttttgttacaaaattagttcaatcttttaaatcatattttctctttcct 41104092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 42882071 - 42882116
Alignment:
Q  604 ctatataaaagatattttttattacaaaattagttcaatgttttga 649  Q
    |||||||||||  ||||||| |||||||||||||||||| ||||||    
T  42882071 ctatataaaagcgattttttgttacaaaattagttcaatcttttga 42882116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 24628884 - 24628700
Alignment:
Q  16 catcacggaatccatttttgggaagaagagagaaagcattggaatggtttaacaactcatcaccaaaagcccagtaaacggcaacagctgaaggaatcgt 115  Q
    |||||||  |||||||||| || || ||||||||||||||||||||||| |  |  ||||| ||||| ||||| ||||| |||   || |||||||||||    
T  24628884 catcacgccatccatttttaggtaggagagagaaagcattggaatggttaagaagttcatctccaaaggcccaataaacagcagtggcagaaggaatcgt 24628785  T
Q  116 taatgtgaaaacgtacaaagttgccagaaaatatatgtacttgaacttttgaggtttccacattgcatgcataatctctctgcaa 200  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||| ||||| || |||||||| || ||||||||||||||||||    
T  24628784 taatgtgaaaacgtataaagttgccatcaaatatatgtacttgaatttttgtggcttccacatggcgtgcataatctctctgcaa 24628700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 593 - 672
Target Start/End: Complemental strand, 26151243 - 26151164
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcctataa 672  Q
    |||||||||  |||||||||||| ||||||| |||| ||||||||||||| ||||||| | |||||||||||||||||||    
T  26151243 tttggatacatctatataaaagagattttttgttactaaattagttcaatcttttgactcgtattttctctctcctataa 26151164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 38319950 - 38320037
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||| | || |||||||| ||||||    
T  38319950 taatctagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaaccatattttctatctcct 38320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 554 - 663
Target Start/End: Original strand, 4399640 - 4399748
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaag-atattttttattacaaaattagttcaatgttttgaccc 652  Q
    ||||||||||||||||| || ||||  ||||||||||| ||||||||| |||||||||||| |  |||||| |||||||||||||||||| |||  | ||    
T  4399640 ataaaaatcactttttctaaaaaaa--taatttagtttgtttggatacaactatataaaagcaattttttttttacaaaattagttcaatctttaaatcc 4399737  T
Q  653 ttattttctct 663  Q
     ||||||||||    
T  4399738 atattttctct 4399748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 575 - 661
Target Start/End: Original strand, 11750040 - 11750126
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaa-gatattttttattacaaaattagttcaatgttttgacccttattttct 661  Q
    ||||| |||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||| |||||||  |||||||||    
T  11750040 aaaaaataatctagtttatttggatacaactatataaaatgat-ttttttattacaaaattacttcaatcttttgacatttattttct 11750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 23640868 - 23640756
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||||||||| |||  |||  ||||||| |||  |||||||| ||| ||||||||| ||||||| |||||||||||||||||| |||| | |      
T  23640868 ataaaaatcacttttttaaaacaaa--taatttaatttggttggatacaactctataaaagagatttttttttacaaaattagttcaatcttttaatcta 23640771  T
Q  654 tattttctctctcct 668  Q
    |||||||||||||||    
T  23640770 tattttctctctcct 23640756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 30122004 - 30121917
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| |||||||||||   ||||||| |||||||||||||||||| |||| | || ||||||||| |||||    
T  30122004 taatttagtttgtttggatacaactatataaaaagaattttttgttacaaaattagttcaatcttttaatccatattttctccctcct 30121917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 10282567 - 10282501
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| |||||||||||||||||||||| |||||||| | |||||||||||||||| ||||    
T  10282567 taatctagtttgtttggatactactatataaaaggtattttttgtaacaaaattagttcaatatttt 10282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 584 - 666
Target Start/End: Original strand, 21696481 - 21696562
Alignment:
Q  584 tttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    |||||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||||  | |||||||||||||    
T  21696481 tttagtttgtttggatacaactatataaaagg-attttttgttacaaaattagttcaatcttttgaatcatattttctctctc 21696562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 598 - 668
Target Start/End: Original strand, 29854700 - 29854770
Alignment:
Q  598 atactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||||||| ||||||  |||||||||||||||||| |||||| || |||||||||||||||    
T  29854700 atacaactatataaaagagatttttcgttacaaaattagttcaatattttgaaccatattttctctctcct 29854770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 649
Target Start/End: Complemental strand, 33858083 - 33858015
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttga 649  Q
    |||||| |||||||||||||| ||||||||||||| ||||||| ||| |||||||||| ||| ||||||    
T  33858083 taattttgtttatttggatacaactatataaaagagattttttgttaaaaaattagtttaatcttttga 33858015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 5801131 - 5801064
Alignment:
Q  581 taatttagtttatttggatactactatataaaagata-ttttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||||| ||||||||||||| | |||||| |||||||||||||||||| ||||    
T  5801131 taatttagtttgtttggatacaactatataaaagagatttttttgttacaaaattagttcaatatttt 5801064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 593 - 668
Target Start/End: Complemental strand, 26246702 - 26246627
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||| ||||||||| ||||||| |||||||||||||| ||| |||| | || |||||||||||||||    
T  26246702 tttggatacaactttataaaagagattttttgttacaaaattagtttaatcttttaaaccctattttctctctcct 26246627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 26970502 - 26970415
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| ||||||| |||   ||||||| ||||||||||||||||||||||| |  | |||||| ||||||||    
T  26970502 taatttagtttgtttggatacaactatatgaaaatgattttttgttacaaaattagttcaatgttttaaatcatattttatctctcct 26970415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 667
Target Start/End: Complemental strand, 47222626 - 47222539
Alignment:
Q  581 taatttagtttatttggatactactatataaaa-gatattttttattacaaaattagttcaatgttttgacccttattttctctctcc 667  Q
    ||||||| ||| ||||||||  ||||||||||| || ||||||| |||||||||||||||||| |||| | || ||||||||||||||    
T  47222626 taatttaatttgtttggatataactatataaaaagagattttttgttacaaaattagttcaatcttttaaaccatattttctctctcc 47222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 24689321 - 24689413
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaa--agatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||||| ||| |||   |||| |||||| ||||||||| ||||||||||  |||| |||||| |||||||||||||||||| ||||    
T  24689321 ataaaaatcacttttttaaacaaa---taatctagtttgtttggatacaactatataaaagagattttttttgttacaaaattagttcaatctttt 24689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 24688901 - 24688787
Alignment:
Q  552 tgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacc 651  Q
    ||||||||||||||||||  ||  |||  ||||||||||| || | |||| |||||||||||   ||||||| |||| ||||||||||||| |||| | |    
T  24688901 tgataaaaatcactttttttaaacaaa--taatttagtttgttcgaatacaactatataaaaatgattttttgttaccaaattagttcaatcttttaaac 24688804  T
Q  652 cttattttctctctcct 668  Q
    | |||||||||||||||    
T  24688803 catattttctctctcct 24688787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 10283411 - 10283300
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||| ||||| ||| |||   ||||||||||| ||| |||||  |||||||||||  ||||||| ||||||||||||||||||  ||| | ||     
T  10283411 ataaaaatcatttttttaaacaaa---taatttagtttgtttcgatacagctatataaaagggattttttgttacaaaattagttcaatcgtttaaacca 10283315  T
Q  654 tattttctctctcct 668  Q
    ||||| |||||||||    
T  10283314 tatttcctctctcct 10283300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 40261915 - 40262002
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| |||||||||||    |||||| |||||||||||||||||| |||| |  | ||||||| |||||||    
T  40261915 taatttagtttgtttggatacaactatataaaaagggttttttgttacaaaattagttcaatattttaaaacatattttccctctcct 40262002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 24162261 - 24162195
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||| |  |||||||||||| ||||||| |||||||||||||||||| ||||    
T  24162261 taatctagtttgtttggatgcatctatataaaagagattttttgttacaaaattagttcaatctttt 24162195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 668
Target Start/End: Original strand, 30121282 - 30121364
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| |||| |||| ||||||||||||  ||||||| |||||||||||||||||| |||| |    |||||||||||||||    
T  30121282 tagtttgtttgaatacaactatataaaaggaattttttgttacaaaattagttcaatcttttaaattatattttctctctcct 30121364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 30122184 - 30122250
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||| ||||||||||||||  ||||||| ||||||| || ||||||| ||||    
T  30122184 taatttagtttgtttggattctactatataaaaggaattttttgttacaaagttggttcaatctttt 30122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 585 - 666
Target Start/End: Complemental strand, 45689604 - 45689524
Alignment:
Q  585 ttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    ||||||| ||||| ||| ||||||||||||  | |||| || |||||| ||||||||| |||||||||||||||||| ||||    
T  45689604 ttagtttgtttgggtacaactatataaaagtgaatttt-ataacaaaactagttcaatcttttgacccttattttctatctc 45689524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 44434794 - 44434681
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatat-tttttattacaaaattagttcaatgttttgaccc 652  Q
    |||||||||||||||| |||  |||  ||||||||||| ||||||||| ||||||||||||| || |||||  ||||||| || |||||| |||| |  |    
T  44434794 ataaaaatcacttttttaaaacaaa--taatttagtttgtttggatacaactatataaaagagatatttttgatacaaaactatttcaatcttttaattc 44434697  T
Q  653 ttattttctctctcct 668  Q
     || ||||||||||||    
T  44434696 ataatttctctctcct 44434681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 668
Target Start/End: Original strand, 15738914 - 15738973
Alignment:
Q  609 taaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||||||| ||| |||||||||||||| |||||||| |||| || ||||||||    
T  15738914 taaaagagattttttgttataaaattagttcaatcttttgaccattatattatctctcct 15738973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 650
Target Start/End: Complemental strand, 18955146 - 18955079
Alignment:
Q  583 atttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgac 650  Q
    ||||||||||||| ||||| |||||||||||||||| |||| | |||||| || || ||| |||||||    
T  18955146 atttagtttattttgatacaactatataaaagatatattttgtcacaaaagtatttaaatcttttgac 18955079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 23809020 - 23808933
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||||||| |||||||| ||||||||||||  ||||||  ||||||||||| ||  || |||| | || |||||||||| ||||    
T  23809020 taatttagtttagttggatacaactatataaaagggatttttcgttacaaaattaattagattttttaaaccatattttctctttcct 23808933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 37986070 - 37985984
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||| || || |||||| ||||||||||||  |||||||  || ||| ||||||||||  |||| |||||||||||||||||||    
T  37986070 taatttagcttgttcggatacaactatataaaagggattttttgataaaaatttagttcaat-ctttggcccttattttctctctcct 37985984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 598 - 668
Target Start/End: Complemental strand, 4594541 - 4594471
Alignment:
Q  598 atactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||||||||  |||||||| |||| ||||||||||||| |||| | || |||||||| ||||||    
T  4594541 atacaactatataaaatctattttttgttactaaattagttcaatcttttaaaccatattttctttctcct 4594471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 18984764 - 18984714
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaa 632  Q
    |||||||||| ||||||||| ||||||||||||| ||||||  ||||||||    
T  18984764 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18984714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 18989579 - 18989529
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaa 632  Q
    |||||||||| ||||||||| ||||||||||||| ||||||  ||||||||    
T  18989579 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 18999393 - 18999343
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaa 632  Q
    |||||||||| ||||||||| ||||||||||||| ||||||  ||||||||    
T  18999393 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 638
Target Start/End: Original strand, 45883295 - 45883353
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatat-tttttattacaaaattagtt 638  Q
    ||||| ||||||||||||||| |||||||||||||| | ||||| |||||||| |||||    
T  45883295 taattcagtttatttggatacaactatataaaagatttatttttgttacaaaactagtt 45883353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 46897946 - 46898012
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||||  |||| |||||||  ||||||| |||||||||||||||||| ||||    
T  46897946 taatctagtttgtttggatataactagataaaagggattttttgttacaaaattagttcaatctttt 46898012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 650
Target Start/End: Complemental strand, 10282766 - 10282697
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgac 650  Q
    ||||||||||| |||||||||  |||  ||||||| ||| ||| |||||||| ||||||||| |||||||    
T  10282766 taatttagtttgtttggatacatctacgtaaaagagattgtttgttacaaaactagttcaatcttttgac 10282697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 641
Target Start/End: Complemental strand, 15641102 - 15641014
Alignment:
Q  556 aaaaatcactttttcaaagaaaaat--taatttagtttatttggatactactatataaaagata-ttttttattacaaaattagttcaa 641  Q
    |||||||||||||| ||| |||||   ||||||||||| |||||| ||  |||||||||||  | |||||| |||||||||||||||||    
T  15641102 aaaaatcacttttttaaaaaaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttttttttacaaaattagttcaa 15641014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 436 - 505
Target Start/End: Complemental strand, 26127935 - 26127866
Alignment:
Q  436 tttgttacggattaaaataaaaatagttttgatattgaatgaattcgagattattttttcgaaattttat 505  Q
    ||||||| |||||||||||||||||||||| ||||  ||| | || ||||||| ||||| || |||||||    
T  26127935 tttgttatggattaaaataaaaatagttttcatataaaattatttagagattaatttttagagattttat 26127866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 595 - 668
Target Start/End: Original strand, 26970742 - 26970815
Alignment:
Q  595 tggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| | ||||||||||  | ||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  26970742 tggatacaattatataaaagggactttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 26970815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 3e-26; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 581 - 666
Target Start/End: Complemental strand, 342766 - 342681
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  342766 taatttagtttgtttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttggcccttattttctctctc 342681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 555 - 668
Target Start/End: Original strand, 1030363 - 1030474
Alignment:
Q  555 taaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccctt 654  Q
    ||||||||| ||||| ||| |||||||| ||| |||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| |||| || |||    
T  1030363 taaaaatcaattttttaaa-aaaaatta-tttggtttgtttggatacaactatataaaagtgattttttgttacaaaattagttcaatcttttaactctt 1030460  T
Q  655 attttctctctcct 668  Q
    ||||||||||||||    
T  1030461 attttctctctcct 1030474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 27882160 - 27882252
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||||| |||  ||||| |||||||||| ||||||||| ||||||||||||| ||||||| |||||||| || |||||| ||||    
T  27882160 ataaaaatcactttttaaaaacaaaat-aatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaattcaatctttt 27882252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 552 - 668
Target Start/End: Complemental strand, 35308251 - 35308135
Alignment:
Q  552 tgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaag--atattttttattacaaaattagttcaatgttttga 649  Q
    ||||||||||||||||||  ||  |||  ||||||||||| ||||||||| ||||||||||||  || |||||| |||||||||||||||||| |||| |    
T  35308251 tgataaaaatcactttttttaaacaaa--taatttagtttgtttggatacaactatataaaagggattttttttgttacaaaattagttcaatcttttaa 35308154  T
Q  650 cccttattttctctctcct 668  Q
      | |||||||||||||||    
T  35308153 atcatattttctctctcct 35308135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 13916539 - 13916605
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||    
T  13916539 taatttagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatctttt 13916605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 544 - 641
Target Start/End: Original strand, 27917507 - 27917602
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaa 641  Q
    ||||||| | ||||||||||||||||  ||  |||  |||| |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  27917507 gtttactgtaataaaaatcactttttttaaacaaa--taatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaa 27917602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 544 - 641
Target Start/End: Original strand, 27963926 - 27964021
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaa 641  Q
    ||||||| | ||||||||||||||||  ||  |||  |||| |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  27963926 gtttactgtaataaaaatcactttttttaaacaaa--taatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaa 27964021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 28022341 - 28022432
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||||| |||  |||  ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| || |||||| ||||    
T  28022341 ataaaaatcactttttaaaaacaaa--taatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaattcaatctttt 28022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 581 - 642
Target Start/End: Original strand, 40737432 - 40737493
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  40737432 taatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaat 40737493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 665
Target Start/End: Complemental strand, 9269352 - 9269264
Alignment:
Q  577 aaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctct 665  Q
    |||| ||||| |||| |||||  || ||||||||||||| |||||||||||||||||||  ||||  ||||||| ||||||||||||||    
T  9269352 aaataaattttgtttgtttggccacaactatataaaagagattttttattacaaaattaactcaaacttttgacacttattttctctct 9269264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 544 - 647
Target Start/End: Original strand, 15199701 - 15199802
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatg 643  Q
    ||||||| | ||||||||||||||||  ||  |||  ||||||||||| |||| |||| ||||||||||||   |||||||||||||||||||||||||     
T  15199701 gtttactgtaataaaaatcactttttttaaacaaa--taatttagtttgtttgaatacaactatataaaaggagttttttattacaaaattagttcaatc 15199798  T
Q  644 tttt 647  Q
    ||||    
T  15199799 tttt 15199802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 27881319 - 27881379
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaa 641  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  27881319 taatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaa 27881379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 28021500 - 28021560
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaa 641  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  28021500 taatctagtttgtttggatacaactatataaaagaaattttttgttacaaaattagttcaa 28021560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 555 - 667
Target Start/End: Original strand, 28152447 - 28152558
Alignment:
Q  555 taaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccctt 654  Q
    |||||||||||||||  || | |||| ||| |||| ||||||||||| ||||||||||| | ||| ||| |||||||||||||||||| ||||||   ||    
T  28152447 taaaaatcactttttttaaaataaat-aatctagtgtatttggatacaactatataaaatagattatttgttacaaaattagttcaatcttttgatattt 28152545  T
Q  655 attttctctctcc 667  Q
    |||||||| ||||    
T  28152546 attttctccctcc 28152558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 544 - 668
Target Start/End: Complemental strand, 40796302 - 40796178
Alignment:
Q  544 gtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaa--gatattttttattacaaaattagttcaa 641  Q
    ||||||| |||||||||||| ||||| |||  |||  |||| |||||| |||||||||  ||||||||||  ||  |||||| |||||||||||||||||    
T  40796302 gtttactatgataaaaatcatttttttaaaacaaa--taatctagtttgtttggatacagctatataaaaatgaattttttttttacaaaattagttcaa 40796205  T
Q  642 tgttttgacccttattttctctctcct 668  Q
    | |||| | || |||||||||||||||    
T  40796204 tcttttaaaccatattttctctctcct 40796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 585 - 668
Target Start/End: Complemental strand, 5424570 - 5424487
Alignment:
Q  585 ttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||||||||| ||||||||||||| | ||||| |||||||||| ||||||| |||| | || |||||||||| ||||    
T  5424570 ttagtttgtttggatacaactatataaaagagactttttgttacaaaatttgttcaatcttttaaaccatattttctctatcct 5424487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 339873 - 339950
Alignment:
Q  593 tttggatactactatataaaag--atattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||||||||||  || |||||| || |||||| |||||||| ||||||||| |||||||||||||||    
T  339873 tttggatacaactatataaaaggaattttttttgtttcaaaatcagttcaatcttttgacccatattttctctctcct 339950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 581 - 665
Target Start/End: Original strand, 45182962 - 45183043
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctct 665  Q
    ||||||||||| ||||||||| ||   ||||||   |||||||||||||||||||||||||| |||||| || ||||||||||||    
T  45182962 taatttagtttgtttggatacaac---ataaaaacaattttttattacaaaattagttcaatcttttgatccatattttctctct 45183043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 5424777 - 5424865
Alignment:
Q  581 taatttagtttatttggatactactatataaaagata-ttttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| ||||||||||||  | |||||| |||||||||||||||||| |||| |  | ||||||| |||||||    
T  5424777 taatttagtttgtttggatacaactatataaaagggatttttttgttacaaaattagttcaatcttttaaagcatattttcactctcct 5424865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Complemental strand, 17073054 - 17072978
Alignment:
Q  593 tttggatactactatataaaagatatttttt-attacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||| |  | |||||||||| ||||    
T  17073054 tttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattttctctgtcct 17072978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 17575216 - 17575292
Alignment:
Q  593 tttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| |  | |||||||||| ||||    
T  17575216 tttggatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaatcatattttctctgtcct 17575292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 6007678 - 6007765
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| |||| |||| ||||||||||||  ||||||| || ||||||||||||||| |||| |  | |||||||||||||||    
T  6007678 taatctagtttgtttgaatacaactatataaaagggattttttgttgcaaaattagttcaatcttttaaatcatattttctctctcct 6007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 557 - 647
Target Start/End: Original strand, 27964799 - 27964887
Alignment:
Q  557 aaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||||| |||  |||  ||||| ||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||| ||||    
T  27964799 aaaatcacttttttaaaacaaa--taattgagtttgtttggatacaactatataaaagggattttttgttacaaaactagttcaatctttt 27964887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 605 - 659
Target Start/End: Original strand, 32855159 - 32855214
Alignment:
Q  605 tatataaaagatatttttta-ttacaaaattagttcaatgttttgacccttatttt 659  Q
    ||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||    
T  32855159 tatataaaagagatttttttgttacaaaattagttcaatcttttgacccttatttt 32855214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 575 - 668
Target Start/End: Complemental strand, 27882542 - 27882448
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||| ||||||||||| |||||| ||  |||||||||||  ||||| || |||||||||||||||||| ||| || ||  ||||||||||||||    
T  27882542 aaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacattttctctctcct 27882448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 575 - 668
Target Start/End: Complemental strand, 28022722 - 28022628
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||| ||||||||||| |||||| ||  |||||||||||  ||||| || |||||||||||||||||| ||| || ||  ||||||||||||||    
T  28022722 aaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccacattttctctctcct 28022628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 5764899 - 5764974
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||||||||||  ||||||| ||||||| ||| |||||| |||| | |  |||||||||||||||    
T  5764899 tttggatacaactatataaaagggattttttgttacaaagttacttcaatattttaagcaatattttctctctcct 5764974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 672
Target Start/End: Complemental strand, 28828118 - 28828025
Alignment:
Q  581 taatttagtttatttggatactactatataaaa--gatattttttattacaaaattagttcaatgttttgacccttattttctctctcctataa 672  Q
    ||||||| ||| ||||||||| |||||||||||  ||| |||||  ||||||| |||||||||| |||| |  | ||||||| |||||||||||    
T  28828118 taatttaatttgtttggatacaactatataaaagggatttttttcgttacaaagttagttcaatcttttaaatcatattttcactctcctataa 28828025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 642
Target Start/End: Original strand, 24981514 - 24981575
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    ||||||||||| |||| |||| ||||| ||||||  ||||||| ||||||||||| ||||||    
T  24981514 taatttagtttgtttgaatacgactatgtaaaagggattttttgttacaaaattaattcaat 24981575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 7e-24; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 581 - 666
Target Start/End: Original strand, 5246520 - 5246605
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||| | ||||||||||||||||    
T  5246520 taatttagtttgtttggatacaactatataaaagagatttttttttacaaaattagttcaatcttttaaaccttattttctctctc 5246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 575 - 671
Target Start/End: Original strand, 19950739 - 19950835
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcctata 671  Q
    ||||| ||||||||||| ||| ||||| | |||||||||| |||||||||||||| ||||| |||||| |||||||||||||| |||||| ||||||    
T  19950739 aaaaaataatttagtttgtttagatacaattatataaaaggtattttttattacataattatttcaatcttttgacccttattctctctcccctata 19950835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 525 - 668
Target Start/End: Original strand, 1349608 - 1349749
Alignment:
Q  525 agaatttattttgagtatggtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatatttttta 624  Q
    ||||| ||||||| || | ||||||| | |||||||||| ||||| |||  |||  |||| |||||| ||||||||| ||||||||||||  |||||||     
T  1349608 agaatctattttgcgttttgtttactgtaataaaaatcatttttttaaaacaaa--taatctagtttgtttggatacaactatataaaagggattttttg 1349705  T
Q  625 ttacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||||||||||||| |||| |  | |||||||||||||||    
T  1349706 ttacaaaattagttcaatcttttaaatcatattttctctctcct 1349749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 19134739 - 19134853
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||| ||||| ||| | ||| |||| |||||| ||||||||| | ||||||||||  ||||||| |||||||||||||||||| |||| | |      
T  19134739 ataaaaatcatttttttaaaaacaaaataatctagtttgtttggatacaattatataaaagggattttttgttacaaaattagttcaatcttttaaacaa 19134838  T
Q  654 tattttctctctcct 668  Q
    |||||||||||||||    
T  19134839 tattttctctctcct 19134853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 576 - 668
Target Start/End: Complemental strand, 6429581 - 6429488
Alignment:
Q  576 aaaattaatttagtttatttggatactactatataaaa--gatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||||| || |||||| |||||||||||  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||    
T  6429581 aaaaataatttagtttgttaggatacaactatataaaaacgatatttttg-ttacaaaattagttcaatcttttgatccatattttctctctcct 6429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 608 - 668
Target Start/End: Complemental strand, 7293488 - 7293428
Alignment:
Q  608 ataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||| ||||||||||| |||||||||| ||| ||||||| |||||||||||||||||    
T  7293488 ataaaagagattttttattataaaattagtttaatcttttgactcttattttctctctcct 7293428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 605 - 668
Target Start/End: Complemental strand, 25458588 - 25458525
Alignment:
Q  605 tatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||  ||||||| |||||||||||||||||| |||||| || |||||||||||||||    
T  25458588 tatataaaagcgattttttgttacaaaattagttcaatcttttgatccatattttctctctcct 25458525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 34383385 - 34383472
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||| || ||||||||| ||||||||||||  || |||| ||||||||| | |||||| |||| | ||||||||||||||||||    
T  34383385 taatttagattgtttggatacaactatataaaagggatattttgttacaaaatcaattcaatcttttaagccttattttctctctcct 34383472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 19135034 - 19135111
Alignment:
Q  593 tttggatactactatataaaagatattttttat--tacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||||||||||| ||||||| |  ||||||||||||||||| |||| | || |||||||||||||||    
T  19135034 tttggatacaactatataaaagagattttttttgttacaaaattagttcaatcttttaaaccatattttctctctcct 19135111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 586 - 647
Target Start/End: Complemental strand, 35039813 - 35039752
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||    
T  35039813 tagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatctttt 35039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 668
Target Start/End: Original strand, 28793982 - 28794095
Alignment:
Q  553 gataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccc 652  Q
    |||||||||||||||||  ||  |||  ||||||||||| ||||||||| |||||||||| |  ||||||  ||||||||||| |||||| |||| | ||    
T  28793982 gataaaaatcactttttttaaacaaa--taatttagtttgtttggatacaactatataaacgggatttttcgttacaaaattatttcaatcttttaaacc 28794079  T
Q  653 ttattttctctctcct 668  Q
     |||||| ||||||||    
T  28794080 gtattttttctctcct 28794095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 35040493 - 35040405
Alignment:
Q  581 taatttagtttatttggatactactatataaaa-gatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| ||||||||||| |  ||||||| |||||||||||||||||| |||| |  | ||||||||| |||||    
T  35040493 taatttagtttgtttggatacaactatataaaagggaattttttgttacaaaattagttcaatcttttaaatcatattttctccctcct 35040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 664
Target Start/End: Original strand, 35781387 - 35781458
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||| ||| |||| |  | |||||||||||    
T  35781387 tttggatacaactatataaaatatattttttgttacaaaattagtttaatcttttaaatcatattttctctc 35781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 667
Target Start/End: Complemental strand, 2211332 - 2211246
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcc 667  Q
    ||||||||||| ||||||||| |   ||||||||| ||||||| ||||||||||| || ||| |||| | || ||||||||||||||    
T  2211332 taatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttaatattttaaaccatattttctctctcc 2211246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 35040966 - 35041057
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||||| |||  |||  |||| |||||| || |||||| |||||||||| || ||||| | |||||||||||||||||| ||||    
T  35040966 ataaaaatcacttttttaaaacaaa--taatctagtttgttaggatacaactatataaatgagattttatgttacaaaattagttcaatctttt 35041057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 436 - 505
Target Start/End: Original strand, 19950609 - 19950678
Alignment:
Q  436 tttgttacggattaaaataaaaatagttttgatattgaatgaattcgagattattttttcgaaattttat 505  Q
    |||| |||||||||||||||||||  |||||| ||||||||  || ||||||||||||| || |||||||    
T  19950609 tttgctacggattaaaataaaaatcattttgacattgaatggtttagagattattttttagacattttat 19950678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 576 - 668
Target Start/End: Complemental strand, 20515381 - 20515288
Alignment:
Q  576 aaaattaatttagtttatttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||||| |||||| ||  |||||||||||  ||||| || |||||||||||||||||| ||| || || |||||||| ||||||    
T  20515381 aaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaattagttcaatctttagatccatattttctttctcct 20515288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 554 - 660
Target Start/End: Original strand, 1349223 - 1349326
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||| ||||||| ||| |||   ||||||||||| ||| ||||  ||||||||||||| || ||||  ||||||||||||| ||| |||||| ||     
T  1349223 ataaaaataactttttaaaataaa---taatttagtttgtttagatataactatataaaagaaatgttttgatacaaaattagtttaatcttttgaacca 1349319  T
Q  654 tattttc 660  Q
    |||||||    
T  1349320 tattttc 1349326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 647
Target Start/End: Original strand, 38184275 - 38184363
Alignment:
Q  556 aaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||| |||  |||  ||||||||||| ||||| ||| ||||||||||||  ||||||| ||||||||||| |||||| ||||    
T  38184275 aaaaatcacttttttaaaacaaa--taatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaattacttcaatctttt 38184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 556 - 647
Target Start/End: Complemental strand, 38214082 - 38213994
Alignment:
Q  556 aaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||| |||  |||  ||||||||||| ||||| ||| ||||||||||||  ||||||| ||||||||||| |||||| ||||    
T  38214082 aaaaatcacttttttaaaacaaa--taatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaattacttcaatctttt 38213994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 661
Target Start/End: Complemental strand, 19170374 - 19170270
Alignment:
Q  553 gataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccc 652  Q
    ||||||||||||| ||| | | ||| | ||||||||||| |||| |||| || |||||| ||    ||||| ||| |||||||||||||| ||||||||     
T  19170374 gataaaaatcactatttaagaaaaataataatttagtttgtttgaatacaacgatataagag----tttttgttataaaattagttcaatcttttgacca 19170279  T
Q  653 ttattttct 661  Q
    |||||||||    
T  19170278 ttattttct 19170270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 633
Target Start/End: Complemental strand, 35781716 - 35781642
Alignment:
Q  556 aaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaat 633  Q
    |||||||||||||| ||| |||   ||||||||||| ||| ||||| ||||||||||||  ||||||| |||||||||    
T  35781716 aaaaatcacttttttaaacaaa---taatttagtttgttttgatacaactatataaaagggattttttgttacaaaat 35781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 36197552 - 36197623
Alignment:
Q  434 tgtttgttacggattaaaataaaaatagttttgatattgaatgaattcgagattattttttcgaaattttat 505  Q
    ||||||||||||||||||||||||||  |||||| ||  ||| | || ||||||||||||| || |||||||    
T  36197552 tgtttgttacggattaaaataaaaatgattttgacataaaataatttagagattattttttagagattttat 36197623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 662
Target Start/End: Original strand, 43582984 - 43583060
Alignment:
Q  584 tttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctc 662  Q
    |||||||| ||||||||| |  |||||||||  ||||||| |||||||||||||||||| ||||||  | |||||||||    
T  43582984 tttagtttgtttggatacaa--atataaaagggattttttgttacaaaattagttcaatcttttgaatcatattttctc 43583060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 5249356 - 5249422
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||  |||| |||| ||||||||||||  ||||||| || ||||||||||||||| ||||    
T  5249356 taatttagttagtttgaatacaactatataaaagggattttttgttgcaaaattagttcaatctttt 5249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 35040161 - 35040227
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||| | || |||||||||  ||||||| ||||||| |||||||||| ||||    
T  35040161 taatttagtttgtttggattcaaccatataaaaggaattttttgttacaaatttagttcaatatttt 35040227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 581 - 665
Target Start/End: Complemental strand, 43968294 - 43968210
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctct 665  Q
    ||||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  43968294 taatttagtttgtttggatacaacgatataaaagagattttttgttacaaaattagttcaatcttttaacccttattttctctct 43968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 40662860 - 40662749
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||||||||| ||| |||   ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| |||| |  |     
T  40662860 ataaaaatcacttttttaaataaa---taatttagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaattttttaaatca 40662764  T
Q  654 tattttctctctcct 668  Q
    |||||||||||||||    
T  40662763 tattttctctctcct 40662749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 641
Target Start/End: Original strand, 38722854 - 38722914
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaa 641  Q
    ||||||||||| |||| |||| ||||||||||| | |||||||||||||||||||||||||    
T  38722854 taatttagtttgtttgaatacaactatataaaatagattttttattacaaaattagttcaa 38722914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 7495567 - 7495657
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||||||||||||| ||| |||   |||| |||||| ||||||||| ||||||||||||  ||||||| |||||||||| ||||||| ||||    
T  7495567 ataaaaatcacttttttaaacaaa---taatctagtttgtttggatacaactatataaaagggattttttgttacaaaatttgttcaatctttt 7495657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 581 - 642
Target Start/End: Original strand, 15458953 - 15459014
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    |||||| |||| ||||||||| ||||||||||||  ||||||| ||||||||||||||||||    
T  15458953 taatttggtttgtttggatacaactatataaaagtgattttttgttacaaaattagttcaat 15459014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 586 - 647
Target Start/End: Original strand, 30632215 - 30632276
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  30632215 tagtttgtttggatacaactatataaaagagattttttgttacaaaattaattcaatctttt 30632276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 1826763 - 1826850
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||| ||||||| |  |||||||||||  |||||||||||||||||||||||||| |||  |  | |||||||||||||||    
T  1826763 taatttaatttgtttggatccagctatataaaagcgattttttattacaaaattagttcaatctttaaattcatattttctctctcct 1826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 14787220 - 14787295
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||||| ||||||| ||||||| ||||||||||| |||||| |||| | |  |||||||||||||||    
T  14787220 tttggatacaactatctaaaagagattttttgttacaaaattaattcaatcttttaaacaatattttctctctcct 14787295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 20612701 - 20612788
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||||||| ||||| ||||||||||||  ||||||| || ||||||||||| ||| |||| | || |||||| ||||||||    
T  20612701 taatctagtttatttagatacaactatataaaagggattttttgtttcaaaattagtttaatcttttaaaccatattttttctctcct 20612788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 39844298 - 39844211
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||||| ||||||||||||  ||||| | |||||||||||||||||| | || | |  |||||||||||||||    
T  39844298 taatctagtttgtttggatacaactatataaaagggattttctgttacaaaattagttcaatctattaaacaatattttctctctcct 39844211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 42676447 - 42676559
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    ||||||||||||||||  ||  ||||  ||| |||||| |||| |||| ||||||||||||  ||||||| |||||||||||||||||| |||| |  |     
T  42676447 ataaaaatcactttttttaaacaaaa--aatctagtttgtttgcatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaatca 42676544  T
Q  654 tattttctctctcct 668  Q
    |||||||||| ||||    
T  42676545 tattttctctatcct 42676559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 3196998 - 3197064
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||| |||||  |||||||||||  ||||||| |||||||||||||||||| ||||    
T  3196998 taatttagtttgttttgatacagctatataaaagtgattttttgttacaaaattagttcaatctttt 3197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 672
Target Start/End: Original strand, 3256109 - 3256202
Alignment:
Q  581 taatttagtttatttggatactactatataaa--agatattttttattacaaaattagttcaatgttttgacccttattttctctctcctataa 672  Q
    ||||||||||| |||| |||| ||||||||||  |||| |||||| ||| |||||| ||||||| |||| |  | |||||||||||||||||||    
T  3256109 taatttagtttgtttgtatacaactatataaaagagattttttttgttaaaaaattggttcaatcttttaaatcatattttctctctcctataa 3256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 594 - 664
Target Start/End: Complemental strand, 43968632 - 43968562
Alignment:
Q  594 ttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    |||||||| ||||||||||||  ||||||| |||||||||||||||||| |||| |  | |||||||||||    
T  43968632 ttggatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttctctc 43968562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 598 - 668
Target Start/End: Original strand, 45654955 - 45655025
Alignment:
Q  598 atactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||||||| || ||||||| |||||||||||||||||| ||||||    |||||||||||||||    
T  45654955 atacaactatataaatgagattttttgttacaaaattagttcaattttttgaattgtattttctctctcct 45655025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 527 - 647
Target Start/End: Complemental strand, 7075028 - 7074911
Alignment:
Q  527 aatttattttgagtatggtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttatt 626  Q
    |||||||||||||| || |||||  | ||||||||||||||||  ||  | |||||||||||||| || |||||| |||||||||||   |||||||  |    
T  7075028 aatttattttgagtttg-tttaccgtaataaaaatcactttttttaa--acaattaatttagtttgttaggatacaactatataaaaatgattttttgat 7074932  T
Q  627 acaaaattagttcaatgtttt 647  Q
    |||||||||||| ||| ||||    
T  7074931 acaaaattagttaaatttttt 7074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 586 - 666
Target Start/End: Original strand, 34454177 - 34454257
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    |||||| |||||||||  |||||||||||  ||||||| ||||||||||| || ||| ||||||  | |||||||||||||    
T  34454177 tagtttgtttggatacatctatataaaagcgattttttcttacaaaattaatttaatattttgattcatattttctctctc 34454257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 640
Target Start/End: Original strand, 21479216 - 21479275
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttca 640  Q
    |||| |||||| ||||||||| |||| |||||||  ||||||| ||||||||||||||||    
T  21479216 taatctagtttgtttggatacaactacataaaaggcattttttgttacaaaattagttca 21479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 21479413 - 21479480
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatatttttt-attacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||||| ||||||||||||  |||||||  |||||||||||||||||| ||||    
T  21479413 taatctagtttgtttggatacaactatataaaagggattttttcgttacaaaattagttcaatttttt 21479480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 586 - 668
Target Start/End: Original strand, 30668856 - 30668938
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| ||||||||| | ||||||||    ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  30668856 tagtttgtttggatacaattatataaacatgattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 30668938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 650
Target Start/End: Complemental strand, 932690 - 932621
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgac 650  Q
    ||||||||||| |||  |||| |||||||||||  | |||||| |||||||| ||||||||| |||||||    
T  932690 taatttagtttgttttaatacaactatataaaaagtgttttttgttacaaaactagttcaattttttgac 932621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 3e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 45586107 - 45586194
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| |||| |||| || |||||||||||||||||| |||||||||||||||||| |||||| || ||||||| |||||||    
T  45586107 taatttagtttgtttgaatacaacaatataaaagatattttttgttacaaaattagttcaatcttttgaaccatattttcactctcct 45586194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 581 - 664
Target Start/End: Original strand, 11633071 - 11633154
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    |||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |  | |||||||||||    
T  11633071 taatctagtttgtttggatacaactatataaaagagattttttattacaaaattagttcaatcttttaaatcatattttctctc 11633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 40285123 - 40285036
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||||||||||||| ||||||||||||  ||||||| ||||||||||| |||||| |||| |  | |||||||||||||||    
T  40285123 taatctagtttatttggatacaactatataaaaggaattttttgttacaaaattaattcaatattttaaatcatattttctctctcct 40285036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 54356276 - 54356363
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||  ||||||||||||  ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  54356276 taatttagtttgtttggatataactatataaaagggattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 54356363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 585 - 659
Target Start/End: Original strand, 33832809 - 33832883
Alignment:
Q  585 ttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttatttt 659  Q
    ||||||| ||||||||| ||||||||||||| ||||||| | ||||||||| |||||| |||| |||||||||||    
T  33832809 ttagtttgtttggatacaactatataaaagagattttttgtcacaaaattaattcaatcttttaacccttatttt 33832883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 583 - 668
Target Start/End: Complemental strand, 30498516 - 30498431
Alignment:
Q  583 atttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| ||| ||||| ||||||||||||| ||||| | ||| |||||||||||||| |||||| |  |||||||||||||||    
T  30498516 atttagtttgttttgatacaactatataaaagagattttctgttataaaattagttcaatattttgatctatattttctctctcct 30498431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 588 - 668
Target Start/End: Original strand, 8708032 - 8708112
Alignment:
Q  588 gtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||| ||||| ||||||||||||| ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  8708032 gtttgttttgatacaactatataaaagaaattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 8708112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 588 - 668
Target Start/End: Original strand, 9059919 - 9059999
Alignment:
Q  588 gtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||| ||||| ||||||||||||| ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  9059919 gtttgttttgatacaactatataaaagaaattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 9059999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 10333108 - 10333195
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| ||||||||||||  ||||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  10333108 taatctagtttgtttagatacaactatataaaagggattttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 10333195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 21388500 - 21388413
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||||| ||||||||||||  ||||||| ||| |||||||||||||| |||| | |  |||||||||||||||    
T  21388500 taatctagtttgtttggatacaactatataaaagggattttttgttataaaattagttcaatcttttaaacaatattttctctctcct 21388413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 24842561 - 24842475
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||| |||||||||||||  |||||| |||||||||||||||||| |||| |  | ||||||||| |||||    
T  24842561 taatttagtttgtttggatacaactatataaaaga-gttttttgttacaaaattagttcaatattttaaatcatattttctccctcct 24842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 593 - 668
Target Start/End: Complemental strand, 47567705 - 47567630
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||||||||||||||  ||||||| ||||||| |||||||||| |||| | |  |||||||||||||||    
T  47567705 tttggatactactatataaaagggattttttgttacaaagttagttcaatcttttaagcaatattttctctctcct 47567630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 582 - 668
Target Start/End: Original strand, 46515033 - 46515119
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||||| ||  ||||| || |||||||||| |||||||  ||||||||||||||||| |||| | || |||||||||||||||    
T  46515033 aatttagtttgttcagatacaacaatataaaagagattttttgatacaaaattagttcaatattttaaaccatattttctctctcct 46515119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 664
Target Start/End: Original strand, 10297423 - 10297503
Alignment:
Q  584 tttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    |||||||| ||| ||||| | ||||||||||| ||||||| |||||||||||||||||| |||  | || |||||||||||    
T  10297423 tttagtttgttttgatacaaatatataaaagagattttttgttacaaaattagttcaatttttaaaaccatattttctctc 10297503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 1476821 - 1476734
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||| ||||||| ||| ||| ||||||| ||||||| |||||||||||  | ||| |||||||  ||||||||||||||||    
T  1476821 taatttaatttgtttggatgctaatatgtaaaagagattttttgttacaaaattatctaaatcttttgacatttattttctctctcct 1476734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 26167970 - 26167901
Alignment:
Q  581 taatttagtttatttggatactactatataaaaga---tattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||||| |||||||||||||   | |||||| |||||||||||||||||| ||||    
T  26167970 taatttagtttgtttggatacaactatataaaagagatttttttttgttacaaaattagttcaatctttt 26167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 668
Target Start/End: Original strand, 54143012 - 54143087
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| |||||||||||   ||||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  54143012 tttggatacgactatataaaatggattttttgttacaaaattagttcaattttttaaacaatattttctctctcct 54143087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 642
Target Start/End: Complemental strand, 3942684 - 3942597
Alignment:
Q  553 gataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    |||||||||||||||||  ||  |||  |||| |||||| |||| |||| ||||||||||||  ||||||| ||||||||||||||||||    
T  3942684 gataaaaatcactttttttaaacaaa--taatctagtttgtttgaatacaactatataaaagggattttttgttacaaaattagttcaat 3942597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 24485674 - 24485608
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| ||||||||| ||||||||||| |  |||||| |||||||| ||||||||| ||||    
T  24485674 taatttagtttgtttggatacaactatataaaataggttttttgttacaaaactagttcaatctttt 24485608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 581 - 646
Target Start/End: Complemental strand, 10332764 - 10332700
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttt 646  Q
    ||||| ||||| ||||||||| ||||||||||||  ||||||  ||||||||||||||||||||||    
T  10332764 taattcagtttgtttggatacaactatataaaagggatttttg-ttacaaaattagttcaatgttt 10332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 583 - 635
Target Start/End: Original strand, 3789739 - 3789791
Alignment:
Q  583 atttagtttatttggatactactatataaaagatattttttattacaaaatta 635  Q
    ||||||||| ||||||||| | |||||||||| |||||||| |||||||||||    
T  3789739 atttagtttgtttggatacaattatataaaagttattttttgttacaaaatta 3789791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 598 - 666
Target Start/End: Complemental strand, 3827353 - 3827285
Alignment:
Q  598 atactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    |||| ||||||||||| | ||||||| |||||||||||  ||||| ||||||  |||||||||||||||    
T  3827353 atacaactatataaaataaattttttgttacaaaattacctcaatcttttgaaacttattttctctctc 3827285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 593 - 665
Target Start/End: Original strand, 12101080 - 12101152
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctct 665  Q
    ||||||||  ||||||||||||| || |||| |||||||||||||||||| |||| | |  ||||||||||||    
T  12101080 tttggatataactatataaaagagatgttttgttacaaaattagttcaatcttttaaacaatattttctctct 12101152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 586 - 662
Target Start/End: Complemental strand, 55158165 - 55158089
Alignment:
Q  586 tagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctc 662  Q
    |||||||||||||||| || ||||||||   ||| ||| ||| |||||||||||||| ||||||  |||||||||||    
T  55158165 tagtttatttggatacaacaatataaaatgaattatttgttataaaattagttcaatcttttgattcttattttctc 55158089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 665
Target Start/End: Complemental strand, 3781485 - 3781404
Alignment:
Q  587 agtttatttggatactactatataaaagatattttttattacaaaat---tagttcaatgttttgacccttattttctctct 665  Q
    ||||| |||||| || ||||||||||||  ||||||| |||||||||   ||||||||| ||||||| | ||||||||||||    
T  3781485 agtttgtttggaaacaactatataaaagtgattttttgttacaaaataattagttcaatcttttgactcatattttctctct 3781404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 665
Target Start/End: Complemental strand, 3821489 - 3821408
Alignment:
Q  587 agtttatttggatactactatataaaagatattttttattacaaaat---tagttcaatgttttgacccttattttctctct 665  Q
    ||||| ||||||||| ||||||||||||  | ||||| |||||||||   ||||||||| ||||||| | ||||||||||||    
T  3821489 agtttgtttggatacaactatataaaagtgaatttttgttacaaaataattagttcaatcttttgactcatattttctctct 3821408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 26760572 - 26760659
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| |||| |||| ||||||||||||| || |||| ||| ||||||| |||| | |||| | || |||||| ||||||||    
T  26760572 taatttagtttgtttgaatacaactatataaaagaaatattttgttaaaaaattaattcattcttttaaaccatattttttctctcct 26760659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 42583600 - 42583667
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttatta-caaaattagttcaatgtttt 647  Q
    ||||||||||| |||| |||| ||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  42583600 taatttagtttgtttgaatacaactatataaaagagattttttgttataaaaattagttcaatctttt 42583667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 53877648 - 53877735
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||||||| ||||  ||||||||||||  ||| ||| || |||||| |||||||| |||| |  | |||||||||||||||    
T  53877648 taatttagtttatttagatataactatataaaagggattatttgttgcaaaatcagttcaatcttttaaatcatattttctctctcct 53877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 642
Target Start/End: Complemental strand, 54585919 - 54585852
Alignment:
Q  576 aaaattaatttagtttatttggatactactatataaaagata-ttttttattacaaaattagttcaat 642  Q
    |||| ||||||||||| |||||||||  |||||||||||  | |||||| ||||||||||||||||||    
T  54585919 aaaaataatttagtttgtttggatacagctatataaaagcgatttttttgttacaaaattagttcaat 54585852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 54981894 - 54981981
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| |||||||||||   ||||||| |||||||||||||||||| |||| |    |||||||||||||||    
T  54981894 taatctagtttgttttgatacaactatataaaacggattttttgttacaaaattagttcaatcttttaaaatatattttctctctcct 54981981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 635
Target Start/End: Complemental strand, 14900411 - 14900369
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaatta 635  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  14900411 tttggatacaactatataaaagaatttttttattacaaaatta 14900369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 35965017 - 35965054
Alignment:
Q  434 tgtttgttacggattaaaataaaaatagttttgatatt 471  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  35965017 tgtttgttacggattagaataaaaataattttgatatt 35965054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 44077882 - 44077814
Alignment:
Q  581 taatttagtttatttggatactactatataaaa--gatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||||| |||||||||||   || |||||| |||||||||||||||||| ||||    
T  44077882 taatctagtttgtttggatacaactatataaaatgtattttttttgttacaaaattagttcaatctttt 44077814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 47567826 - 47567781
Alignment:
Q  593 tttggatactactatataaaagatattttttattacaaaattagtt 638  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||||||    
T  47567826 tttggatactactatataaaagggattttttgttacaaagttagtt 47567781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 581 - 665
Target Start/End: Complemental strand, 37239163 - 37239078
Alignment:
Q  581 taatttagtttatttggatactactatataaaa-gatattttttattacaaaattagttcaatgttttgacccttattttctctct 665  Q
    ||||||||||| |||||||| |||||||||||| ||| ||||||||||||||| || |||||| |||||||  |||||||||||||    
T  37239163 taatttagtttgtttggataatactatataaaatgattttttttattacaaaactaattcaattttttgacatttattttctctct 37239078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 42834889 - 42834999
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||||||||| |||  |||  ||||||||||| ||||||||  ||||||||||||  ||||||| |||||||||||||||||| |||| | |      
T  42834889 ataaaaatcacttttttaaaacaaa--taatttagtttgtttggata--actatataaaagggattttttgttacaaaattagttcaatcttttaatcta 42834984  T
Q  654 tattttctctctcct 668  Q
    |||||||||||||||    
T  42834985 tattttctctctcct 42834999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 24686198 - 24686285
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| |||||||||  |||||||||||  ||||||| |||||||||||||||||| |||| | || |||||||||||||||    
T  24686198 taatctagtttgtttggatacagctatataaaagcgattttttgttacaaaattagttcaatcttttaatccatattttctctctcct 24686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 663
Target Start/End: Original strand, 43114750 - 43114833
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatatttttta-ttacaaaattagttcaatgttttgacccttattttctct 663  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||  || ||||||||||||||| ||||||||| ||||||||||    
T  43114750 taatttagtttgtttggatataactatataaaagagatttttttgttgcaaaattagttcaatcttttgacccatattttctct 43114833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 33674985 - 33675072
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| |||  |||||||| ||||||||||||| ||||||| ||||||||||| |||||| |||| | |  |||||||||||||||    
T  33674985 taatttaatttgattggatacaactatataaaagagattttttgttacaaaattaattcaatcttttaaacaatattttctctctcct 33675072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 48738500 - 48738587
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||| ||||| ||| ||||||||  ||||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  48738500 taatttagtttgtttagatacaactgtataaaagtgattttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 48738587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 49243784 - 49243850
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| ||||    
T  49243784 taatctagtttgtttggatacaactatataaaagggattttttgttacaaaattagttcaatctttt 49243850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 664
Target Start/End: Original strand, 6318917 - 6318997
Alignment:
Q  584 tttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctc 664  Q
    |||| ||| ||||||| | ||||||||||||  ||||||| |||||||||||||||||| |||| | || |||||||||||    
T  6318917 tttaatttgtttggatgcaactatataaaagggattttttgttacaaaattagttcaatcttttaatccatattttctctc 6318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 26271938 - 26272026
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| |||  |||| ||||||||||||| ||||| ||||||||||||||||||||| |||| | || ||||||  |||||||    
T  26271938 taatttagtttgtttcaatacaactatataaaagagatttttttattacaaaattagttcaatcttttaaaccatatttttcctctcct 26272026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 6844468 - 6844555
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||| | ||||||||||||| ||||||| |||||||||||||| ||| |||| |    |||||||||||||||    
T  6844468 taatctagtttgtttggatgcaactatataaaagagattttttgttacaaaattagtttaatcttttaaataatattttctctctcct 6844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 17054232 - 17054319
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| |||||||||||   ||||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  17054232 taatctagtttgtttcgatacaactatataaaatgaattttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 17054319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 43326043 - 43325956
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||| ||||||||| | ||||||||||  ||||||| |||||||||||||| ||| |||| |  | |||||||||||||||    
T  43326043 taatttaatttgtttggatacaattatataaaagggattttttgttacaaaattagtttaatcttttaaaacatattttctctctcct 43325956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 588 - 639
Target Start/End: Original strand, 47796300 - 47796351
Alignment:
Q  588 gtttatttggatactactatataaaagatattttttattacaaaattagttc 639  Q
    |||| ||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  47796300 gtttgtttagatacaactatataaaagaaattttttattacaaaattagttc 47796351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 610 - 668
Target Start/End: Complemental strand, 45296827 - 45296769
Alignment:
Q  610 aaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| |||||||||||||||||||||||||| |||| | |  |||||||||||||||    
T  45296827 aaaagagattttttattacaaaattagttcaatcttttaaactatattttctctctcct 45296769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 581 - 666
Target Start/End: Original strand, 45807986 - 45808072
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatatttt-ttattacaaaattagttcaatgttttgacccttattttctctctc 666  Q
    |||| |||||| |||||||||  |||||||||||| ||||| ||||||||||||||||||||  |||| | |  |||||||||||||    
T  45807986 taatctagtttgtttggatacacctatataaaagagatttttttattacaaaattagttcaaccttttaaacaatattttctctctc 45808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 8795464 - 8795376
Alignment:
Q  581 taatttagtttatttggatactactata-taaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||| ||||||||   ||||| | ||||| ||||||| |||||||||||||||||| |||| ||  ||| ||||||||||||    
T  8795464 taatttagtttgtttggataaatctataattaaagagattttttgttacaaaattagttcaatattttaacatttaatttctctctcct 8795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 576 - 668
Target Start/End: Complemental strand, 43115050 - 43114958
Alignment:
Q  576 aaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||||| |||||||||  ||||||||||   ||||||| |||||||||||||| ||| |||  | |  |||||||||||||||    
T  43115050 aaaaataatttagtttgtttggatacagctatataaaatcgattttttgttacaaaattagtttaatctttaaatctatattttctctctcct 43114958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 668
Target Start/End: Original strand, 11981121 - 11981206
Alignment:
Q  586 tagtttatttggatactactatataaaagatatttttta---ttacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||| |||||||||  |||||||||||| |||||||    |||||||| ||||||||| |||| ||  ||||||||||||||||    
T  11981121 tagtttgtttggatacatctatataaaagagatttttttattttacaaaactagttcaatcttttaacatttattttctctctcct 11981206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 668
Target Start/End: Original strand, 12016825 - 12016936
Alignment:
Q  557 aaaatcactttttcaaagaaaaattaatttagtttatttggatactactatata--aaagatattttttattacaaaattagttcaatgttttgaccctt 654  Q
    ||||||||||||| |||  |||  ||||||||||| |||||||||  |||||||  ||||  ||||||| ||| |||||||||||||| |||| | || |    
T  12016825 aaaatcacttttttaaaacaaa--taatttagtttgtttggatacagctatatataaaaggaattttttgttataaaattagttcaatcttttaatccat 12016922  T
Q  655 attttctctctcct 668  Q
    ||||| ||||||||    
T  12016923 attttttctctcct 12016936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 668
Target Start/End: Complemental strand, 46148810 - 46148767
Alignment:
Q  625 ttacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||| | |||||| |||||||||||||||||||||||||    
T  46148810 ttacaaaatcaattcaatcttttgacccttattttctctctcct 46148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 47795143 - 47795056
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||| ||||||||| | |||||||||   ||||||| |||||||||||||||||  |||| |  | |||||||||||||||    
T  47795143 taatttattttttttggatacaaatatataaaatggattttttgttacaaaattagttcaaacttttaaatcatattttctctctcct 47795056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 47795520 - 47795433
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| ||||||||||||  ||||||| |||||||||||| ||||| |||| |    |||||||||||||||    
T  47795520 taatctagtttgttttgatacgactatataaaagggattttttgttacaaaattagctcaatcttttaaattatattttctctctcct 47795433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 47795941 - 47796028
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| ||||||||||||  ||||||| |||||||||||| ||||| |||| |    |||||||||||||||    
T  47795941 taatctagtttgttttgatacgactatataaaaggaattttttgttacaaaattagctcaatcttttaaattatattttctctctcct 47796028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Original strand, 11981718 - 11981783
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    |||| |||||| ||||||||| ||||||||||||  | ||||| |||||||||||||||||| ||||    
T  11981718 taatctagtttgtttggatacaactatataaaaggga-tttttgttacaaaattagttcaatctttt 11981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 650
Target Start/End: Original strand, 45378342 - 45378412
Alignment:
Q  581 taatttagtttatttggatac-tactatataaaagatattttttattacaaaattagttcaatgttttgac 650  Q
    ||||||||||| ||||||||| |  ||||||||||  ||||||| |||||||| ||||||||| |||||||    
T  45378342 taatttagtttgtttggatactttttatataaaagggattttttgttacaaaactagttcaatcttttgac 45378412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 604 - 661
Target Start/End: Complemental strand, 47794874 - 47794817
Alignment:
Q  604 ctatataaaagatattttttattacaaaattagttcaatgttttgacccttattttct 661  Q
    |||||||||||  ||||||| |||||||||||||||||| |||| | || ||||||||    
T  47794874 ctatataaaagggattttttgttacaaaattagttcaatcttttaaaccatattttct 47794817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 426 - 459
Target Start/End: Complemental strand, 47795721 - 47795688
Alignment:
Q  426 tatgagcatgtttgttacggattaaaataaaaat 459  Q
    ||||||| ||||||||||||||||||||||||||    
T  47795721 tatgagcttgtttgttacggattaaaataaaaat 47795688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 581 - 642
Target Start/End: Complemental strand, 49480327 - 49480266
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaat 642  Q
    |||| |||||| ||| ||||| ||||| ||||||  ||||||| ||||||||||||||||||    
T  49480327 taatctagtttgttttgatacaactatgtaaaaggaattttttgttacaaaattagttcaat 49480266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 21970 - 22080
Alignment:
Q  554 ataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgaccct 653  Q
    |||||||||||||||| |||  |||  ||||||||||| ||||||||  ||||||||||||  ||||||| |||||||||||||||||| |||| | |      
T  21970 ataaaaatcacttttttaaaacaaa--taatttagtttgtttggata--actatataaaagggattttttgttacaaaattagttcaatcttttaatcta 22065  T
Q  654 tattttctctctcct 668  Q
    |||||||||||||||    
T  22066 tattttctctctcct 22080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 581 - 649
Target Start/End: Complemental strand, 26001335 - 26001267
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttga 649  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||| ||| ||||||    
T  26001335 taatttagtttatttggatacaactatataaaagagattttttgttaaaaaattagtttaatattttga 26001267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 2258787 - 2258700
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| ||||||||||||| ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  2258787 taatctagtttgttttgatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 2258700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 592 - 668
Target Start/End: Complemental strand, 7204873 - 7204797
Alignment:
Q  592 atttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||| |  | |||||| ||||||||    
T  7204873 atttggatacaactatataaaagagattttttgttacaaaattagttcaatcttttaaatcatattttttctctcct 7204797  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 603 - 668
Target Start/End: Complemental strand, 9740645 - 9740583
Alignment:
Q  603 actatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||||| ||||    
T  9740645 actatataaaagagattttttgttacaaaattagttcaa---tttgacccttattttctctttcct 9740583  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 21980914 - 21981001
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||||| |||| |    |||||||||||||||    
T  21980914 taatgtagtttgtttggatacaactatataaaaggaattttttgttacaaaattagttcaatcttttaaaaaatattttctctctcct 21981001  T

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Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 524 - 666
Target Start/End: Original strand, 33438617 - 33438755
Alignment:
Q  524 tagaatttattttgagtatggtttactttgataaaaatcactttttcaaagaaaaattaatttagtttatttggatactactatataaaagatatttttt 623  Q
    |||||||||||||| || || |||||  | ||||||||||||||||  ||  |||  ||||||||||| |||| |||| ||||||||||||| | |||||    
T  33438617 tagaatttattttgcgtttg-tttaccataataaaaatcactttttttaaacaaa--taatttagtttgtttgaatacaactatataaaagaga-ttttt 33438712  T
Q  624 attacaaaattagttcaatgttttgacccttattttctctctc 666  Q
     ||| |||||||||||||| |||| | || |||||||||||||    
T  33438713 gttaaaaaattagttcaatcttttaaaccatattttctctctc 33438755  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 575 - 661
Target Start/End: Complemental strand, 14094150 - 14094064
Alignment:
Q  575 aaaaattaatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttct 661  Q
    ||||| ||||||||||| ||||||||| ||||||||||||  ||||||| ||| ||||||| || ||| |||||| || ||||||||    
T  14094150 aaaaaataatttagtttgtttggatacaactatataaaagcgattttttgttataaaattaatttaattttttgatccatattttct 14094064  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 668
Target Start/End: Complemental strand, 1577462 - 1577403
Alignment:
Q  609 taaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||| ||||||| ||| |||||||||||||| |||||||| |||| || ||||||||    
T  1577462 taaaagagattttttgttataaaattagttcaatcttttgaccattatattatctctcct 1577403  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 10780255 - 10780189
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgtttt 647  Q
    ||||||||||| |||| |||| ||||||||||| | ||||||| ||| |||| ||||||||| ||||    
T  10780255 taatttagtttgtttgtatacaactatataaaatagattttttgttagaaaactagttcaatctttt 10780189  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 205252 - 205338
Alignment:
Q  581 taatttagtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| |||||| ||| ||||| ||||||||||||| ||||||| |||||||||||||||||| |||| | |  |||||||||||||||    
T  205252 taatctagtttgtttagatacaactatataaaaga-attttttgttacaaaattagttcaatcttttaaacaatattttctctctcct 205338  T

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Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 668
Target Start/End: Complemental strand, 106151 - 106071
Alignment:
Q  588 gtttatttggatactactatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    |||| ||||||||| |||||||||||   ||||||| |||||||||||||||||| |||| |  | |||||||||||||||    
T  106151 gtttgtttggatacaactatataaaaaggattttttgttacaaaattagttcaatcttttaaatcatattttctctctcct 106071  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 605 - 668
Target Start/End: Complemental strand, 150253 - 150190
Alignment:
Q  605 tatataaaagatattttttattacaaaattagttcaatgttttgacccttattttctctctcct 668  Q
    ||||||||||  ||||||||| |||||||||||||||| |||| | || |||||||||||||||    
T  150253 tatataaaagggattttttataacaaaattagttcaatcttttaaaccatattttctctctcct 150190  T

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Target: scaffold0267 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 665
Target Start/End: Original strand, 3243 - 3325
Alignment:
Q  587 agtttatttggatactactatataaaagatattttttattacaa----aattagttcaatgttttgacccttattttctctct 665  Q
    ||||| ||||||||| ||||||||||||  ||||||| ||||||    |||||||||||| ||||||| | ||||||||||||    
T  3243 agtttgtttggatacaactatataaaagtgattttttgttacaaaattaattagttcaatcttttgactcatattttctctct 3325  T

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Target: scaffold0625 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 582 - 632
Target Start/End: Original strand, 7182 - 7232
Alignment:
Q  582 aatttagtttatttggatactactatataaaagatattttttattacaaaa 632  Q
    |||||||||| ||||||||| ||||||||||||| ||||||  ||||||||    
T  7182 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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