View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3351_low_14 (Length: 380)
Name: NF3351_low_14
Description: NF3351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3351_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 45 - 366
Target Start/End: Original strand, 29072029 - 29072346
Alignment:
| Q |
45 |
agaaatatgttatgcatgtacctccatcatagcttgaacccaataacgacgattgattgaattgacaccaatgacagtttttgtggggtgtttaacaact |
144 |
Q |
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| T |
29072029 |
agaaatatgttatgcatgtacctccatcatagcttgaacccaataacgacgattgattgaattgacaccaatgacagtttttgtggggtgtttaacaact |
29072128 |
T |
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| Q |
145 |
tggtagagaagccataaatggtatgcaaccattacaaagaggccactagggactaatatgagatcaagaattttcttgtccatttaattttatggaagca |
244 |
Q |
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| T |
29072129 |
tggtagagaagccataaatggtatgcaaccattacaaagaggccactagggactaatatgagatcaagaattttcttgtccatttaattttatagaagca |
29072228 |
T |
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| Q |
245 |
atgtaatgtattaacaagaaagagacgaaatttgattcttagattgaatctgatcaattcgtcgtgtgtatctatctatttttacgtgttatatggaaag |
344 |
Q |
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| T |
29072229 |
atgtaatgtattaacaagaaagagatgaaatttgattcttagattgaatctgatcaattcgtcgtgtg----tatctatttttacgtgttatatggaaag |
29072324 |
T |
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| Q |
345 |
attgaaacagaagaagagagat |
366 |
Q |
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|||||||||||||||||||||| |
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| T |
29072325 |
attgaaacagaagaagagagat |
29072346 |
T |
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