View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3351_low_35 (Length: 246)

Name: NF3351_low_35
Description: NF3351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3351_low_35
NF3351_low_35
[»] chr7 (17 HSPs)
chr7 (1-228)||(11279090-11279316)
chr7 (1-234)||(36222724-36222962)
chr7 (1-227)||(33312593-33312818)
chr7 (1-228)||(46846734-46846957)
chr7 (1-228)||(17863516-17863742)
chr7 (1-228)||(17866775-17867001)
chr7 (1-216)||(23107597-23107811)
chr7 (1-228)||(6966745-6966971)
chr7 (1-228)||(23760030-23760256)
chr7 (1-230)||(36843359-36843587)
chr7 (1-228)||(294462-294688)
chr7 (1-228)||(24783003-24783232)
chr7 (1-225)||(9765398-9765616)
chr7 (67-228)||(23313690-23313849)
chr7 (106-225)||(35773058-35773176)
chr7 (118-225)||(3862435-3862540)
chr7 (9-64)||(3862332-3862387)
[»] chr5 (10 HSPs)
chr5 (5-226)||(26712771-26712991)
chr5 (5-226)||(26982509-26982729)
chr5 (1-228)||(33574686-33574912)
chr5 (1-228)||(15532622-15532848)
chr5 (1-228)||(15542804-15543030)
chr5 (1-228)||(11989239-11989465)
chr5 (1-225)||(14616850-14617073)
chr5 (1-227)||(22159342-22159568)
chr5 (1-228)||(34405446-34405672)
chr5 (1-193)||(7650372-7650562)
[»] chr3 (6 HSPs)
chr3 (1-224)||(39563932-39564153)
chr3 (1-228)||(22626733-22626960)
chr3 (1-228)||(11138991-11139216)
chr3 (1-228)||(13979088-13979310)
chr3 (9-173)||(47411841-47412006)
chr3 (9-173)||(35366028-35366192)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-227)||(2290-2515)
[»] chr2 (8 HSPs)
chr2 (1-228)||(40017575-40017801)
chr2 (1-173)||(16294550-16294723)
chr2 (1-228)||(31527987-31528213)
chr2 (1-228)||(23673766-23673992)
chr2 (1-174)||(31626199-31626373)
chr2 (1-228)||(36326522-36326746)
chr2 (1-173)||(13709721-13709894)
chr2 (1-226)||(32576108-32576331)
[»] chr6 (15 HSPs)
chr6 (1-225)||(16883277-16883500)
chr6 (1-226)||(22247158-22247382)
chr6 (1-226)||(22221323-22221547)
chr6 (1-228)||(13017611-13017837)
chr6 (1-228)||(20527584-20527810)
chr6 (1-228)||(1838071-1838298)
chr6 (1-228)||(14790216-14790442)
chr6 (1-228)||(14795244-14795470)
chr6 (5-228)||(19665089-19665312)
chr6 (2-228)||(15534686-15534912)
chr6 (1-228)||(32704676-32704901)
chr6 (1-225)||(32426969-32427190)
chr6 (9-186)||(12983808-12983989)
chr6 (9-173)||(12980921-12981089)
chr6 (140-228)||(15537881-15537966)
[»] chr4 (6 HSPs)
chr4 (1-226)||(12171582-12171806)
chr4 (1-228)||(26063115-26063341)
chr4 (1-228)||(647625-647851)
chr4 (1-221)||(26060192-26060411)
chr4 (1-222)||(650897-651117)
chr4 (9-228)||(2541483-2541700)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-227)||(7414-7639)
[»] chr1 (16 HSPs)
chr1 (1-228)||(13492860-13493086)
chr1 (1-228)||(13495585-13495811)
chr1 (1-228)||(27282529-27282755)
chr1 (1-226)||(16190593-16190822)
chr1 (1-165)||(22104791-22104956)
chr1 (1-228)||(34065942-34066168)
chr1 (1-228)||(1936225-1936451)
chr1 (1-228)||(32506276-32506501)
chr1 (1-228)||(23990510-23990735)
chr1 (134-228)||(10759719-10759811)
chr1 (1-63)||(39546004-39546066)
chr1 (9-173)||(15296980-15297148)
chr1 (9-186)||(22456920-22457100)
chr1 (9-173)||(21152906-21153071)
chr1 (9-84)||(22453565-22453641)
chr1 (134-186)||(49147745-49147797)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-228)||(6232-6457)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-221)||(3025-3248)
[»] chr8 (5 HSPs)
chr8 (1-226)||(12575721-12575945)
chr8 (4-219)||(44007909-44008122)
chr8 (1-158)||(13096686-13096845)
chr8 (122-222)||(41779220-41779318)
chr8 (1-58)||(41779156-41779213)
[»] scaffold0665 (1 HSPs)
scaffold0665 (1-228)||(66-292)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-117)||(24605-24722)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-80)||(9606-9686)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 11279316 - 11279090
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  11279316 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 11279217  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||    
T  11279216 tgcatgttcataaagctagggttagtagtcgatgataaacatacaaaaagcattaagcacaaggtaatatgaataaagactaaactttcattg-ata-tt 11279119  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  11279118 caaaggagttcaacaaattagggttccca 11279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 36222724 - 36222962
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  36222724 aataatgatctatctctaacttgattacttaggttaaatctattagctagttcagagttaaaagcgagggttagtggtcattcaatttccatgatcaata 36222823  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaa-taaagactaaacttttattgaatat- 197  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  36222824 tgcatgttcataaagctagggctagtagtcgatgataaacatacaaaaagcattaaacacaaggtaatatgaattaaagactaaactttcattgaatatg 36222923  T
Q  198 ---ttcaaaggagttcaacaaattagggttcccacaggtt 234  Q
       |||||| ||||||||||||||||| |||||| |||||    
T  36222924 atattcaaa-gagttcaacaaattaggattcccataggtt 36222962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33312818 - 33312593
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  33312818 aataatgatctatctctagcttgattacttaggttaaacatattacctagttcagagttaaaagtcagggttagtggtcattcaatttctatgatcaata 33312719  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||| ||| |||  ||    
T  33312718 tgcatattcataaagctagggttaatagtcgatgataaacatacataaggcattaaacacaaggtaatatgaataaagactaaattttcatt-aat-gtt 33312621  T
Q  200 caaaggagttcaacaaattagggttccc 227  Q
    ||| ||||||||||||||||||||||||    
T  33312620 caatggagttcaacaaattagggttccc 33312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 46846734 - 46846957
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  ||| |||||| |||||||||||||||||||||||    
T  46846734 aataataatctatctctaacttgattacttaggttaaacctattacttagttcagagttaaaagtcagggttagtgatcattcaatttccatgatcaata 46846833  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||   |||||||| || | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||    
T  46846834 tgcatgttca---agctagggttaatagtcgatgataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactttcattg-ata-tt 46846928  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  46846929 caaaggagttcaacaaattagggttccca 46846957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 17863516 - 17863742
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||| ||| || | ||||| |     
T  17863516 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 17863615  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  17863616 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 17863713  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  17863714 caaaggagttcaacaaattagggttccca 17863742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 17866775 - 17867001
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||| ||| || | ||||| |     
T  17866775 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 17866874  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  17866875 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 17866972  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  17866973 caaaggagttcaacaaattagggttccca 17867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23107811 - 23107597
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggaggtt-agtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||   || | |||||||||||||| || |  ||||||     
T  23107811 aataatgatctatctctaacttgattacttaggttaaacctattacctagttcagagtcaaaagtctgggtcagtggtcattcaatctctactatcaatt 23107712  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||| | ||||| || | |||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||| |||||  | ||    
T  23107711 tgcatattcataacgttagggttaatagtcgatgataaacatgcaaaaagcattaaacaaaaagtaatatgaataaagactaaactttcattga--aatt 23107614  T
Q  200 caaaggagttcaacaaa 216  Q
    |||||||||||||||||    
T  23107613 caaaggagttcaacaaa 23107597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 6966971 - 6966745
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||| ||| || | ||||| |     
T  6966971 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 6966872  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    || || ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  6966871 tgaatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 6966774  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  6966773 caaaggagttcaacaaattagggttccca 6966745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 23760030 - 23760256
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||  | ||||||||||||||||||||| ||||||||||    
T  23760030 aataatgatctatctctagcttgattacttaggttaaacctattacctaattcggagttaaaagccagggttagtggtcattcaatttctatgatcaata 23760129  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||  | ||||||  || | ||| || |||||| |||| || | | ||| ||||| |||||||||||||| |||||||||| ||| |||  ||    
T  23760130 tgcatattcacgacgctaggattaatagtctatcataaacgtacataaggtactaagcacaaagtaatatgaataaaaactaaactttcatt-aat-gtt 23760227  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  23760228 caaaggagttcaacaaattagggttccca 23760256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 36843359 - 36843587
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||| || |  ||||||     
T  36843359 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccaggattagtggtcattcaatctctaacatcaatt 36843458  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaac-atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt 198  Q
    ||||| ||||||||||||||| |||| ||| || |||||| ||| |||||||||||||||||| |||||||||||||| |||| ||||| |||||    |    
T  36843459 tgcatattcataaagctagggttagtagtcaatgataaacaatataaaaagcattaaacacaaagtaatatgaataaaaactagactttcattga--cat 36843556  T
Q  199 tcaaaggagttcaacaaattagggttcccaca 230  Q
    ||||| |||||||||||||||| |||||||||    
T  36843557 tcaaa-gagttcaacaaattagagttcccaca 36843587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 294688 - 294462
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||||||| || | |||||||     
T  294688 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattcaatctctaagatcaatt 294589  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| |||||||| |||| | || | ||  || |||||||||||| |||||||||||| || ||||||||||| || | || ||||| |||| ||| ||    
T  294588 tgcatattcataaaactagagttaatagttcatgataaacatacaataagcattaaacataaagtaatatgaattaaaattatactttcattg-ata-tt 294491  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||| |||||||||||    
T  294490 caaaggagttcaacaaactagggttccca 294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24783232 - 24783003
Alignment:
Q  1 aataatgatctatctctagcttgatta---cttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatca 96  Q
    ||||||||| |||||||||||||||||   |||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||| || | |||||    
T  24783232 aataatgatatatctctagcttgattattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattcaatctctaagatca 24783133  T
Q  97 atatgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaata 196  Q
    || ||||| |||||||||||| || |||| |||||| ||||||||||||||||||| ||||| || |||||||| || || |||| ||||| |||| |||    
T  24783132 atttgcatattcataaagctatggttagtagtcgatgataaacatacaaaaagcatcaaacataaagtaatatggattaaaactagactttcattg-ata 24783034  T
Q  197 tttcaaaggagttcaacaaattagggttccca 228  Q
     ||||||||||||||||||| || ||||||||    
T  24783033 -ttcaaaggagttcaacaaactacggttccca 24783003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9765616 - 9765398
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||||  |||||| |||||  ||| ||||||||||||||||      |||||||     
T  9765616 aataatcatctatctctagcttgattacttaagttaaacttattacctagaccagagtcaaaagtcagggttagtggtcattcaatc-----gatcaatt 9765522  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| | ||||||||||||| || | ||||||  ||||||| ||||| |||||||||| || |||||||||||||| |||| |||||||||  ||| ||    
T  9765521 tgcatatccataaagctagggttaatagtcgatggtaaacatgcaaaacgcattaaacataaagtaatatgaataaaaactagacttttatt-cata-tt 9765424  T
Q  200 caaaggagttcaacaaattagggttc 225  Q
    ||||| ||||||||||||||||||||    
T  9765423 caaagaagttcaacaaattagggttc 9765398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 23313690 - 23313849
Alignment:
Q  67 aggttagtggtcattcaatttccatgatcaatatgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaa 166  Q
    ||||||||||||||||||| || | ||||||| ||||| ||||||||||||||| | || |||||| ||||||||||||||||||||||||| || ||||    
T  23313690 aggttagtggtcattcaatctctaagatcaatttgcatattcataaagctagggtttgtagtcgatgataaacatacaaaaagcattaaacataaagtaa 23313789  T
Q  167 tatgaataaagactaaacttttattgaatatttcaaaggagttcaacaaattagggttccca 228  Q
     |||||||||||||| ||||| |||| ||| |||||||||||| |||||||||| |||||||    
T  23313790 catgaataaagactagactttcattg-ata-ttcaaaggagtttaacaaattagagttccca 23313849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 35773058 - 35773176
Alignment:
Q  106 ttcataaagctagggctagtggtcgattataaaca-tacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaag 204  Q
    ||||||||| ||||| |||| || ||| ||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||| |||||    ||||||     
T  35773058 ttcataaagttagggttagtagttgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaaaactaaactttcattga--cattcaaat 35773155  T
Q  205 gagttcaacaaattagggttc 225  Q
    |||||||||||||||| ||||    
T  35773156 gagttcaacaaattagagttc 35773176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 3862435 - 3862540
Alignment:
Q  118 gggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaaggagttcaacaaat 217  Q
    |||||||| ||| || ||||||||||| ||||||||||| ||||| | |||| |||||| |||| ||||| |||| |||||| |||||||||||||||||    
T  3862435 gggctagtagtcaataataaacatacacaaagcattaaaaacaagatgatataaataaaaactagactttcattg-atattt-aaaggagttcaacaaat 3862532  T
Q  218 tagggttc 225  Q
    ||||||||    
T  3862533 tagggttc 3862540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 3862332 - 3862387
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaag 64  Q
    |||||||||||||| ||||||||||||||||  |  ||||||||||||||| ||||    
T  3862332 tctatctctagcttaattacttaggttaaacacaccacctagttcagagtttaaag 3862387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 26712771 - 26712991
Alignment:
Q  5 atgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaatatgca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||    
T  26712771 atgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaatttctatgatcaatatgca 26712870  T
Q  104 ttttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaa 203  Q
    | ||||||||||||||| || | ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    ||||||    
T  26712871 tattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagactaaactttcattga--tgttcaaa 26712968  T
Q  204 ggagttcaacaaattagggttcc 226  Q
    |||||||||||||||||||||||    
T  26712969 ggagttcaacaaattagggttcc 26712991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 26982509 - 26982729
Alignment:
Q  5 atgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaatatgca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||    
T  26982509 atgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaatttctatgatcaatatgca 26982608  T
Q  104 ttttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaa 203  Q
    | ||||||||||||||| || | ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    ||||||    
T  26982609 tattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagactaaactttcattga--tgttcaaa 26982706  T
Q  204 ggagttcaacaaattagggttcc 226  Q
    |||||||||||||||||||||||    
T  26982707 ggagttcaacaaattagggttcc 26982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 33574912 - 33574686
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  33574912 aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagttagggttagtggtcattcaatttctatgatcaata 33574813  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | ||| || ||||||||||| || |||||||||||||||||||||||||||| |||||||||| |||||    ||    
T  33574812 tgcatattcataaagctagggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattga--tgtt 33574715  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  33574714 caaaggagttcaacaaattagggttccca 33574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15532622 - 15532848
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  15532622 aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 15532721  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||| ||||||| || | ||| || |||||| |||| || ||||||| ||||| |||||| ||||||| |||||||||| |||||    ||    
T  15532722 tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattga--tgtt 15532819  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  15532820 caaaggagttcaacaaattagggttccca 15532848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15542804 - 15543030
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  15542804 aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 15542903  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||| ||||||| || | ||| || |||||| |||| || ||||||| ||||| |||||| ||||||| |||||||||| |||||    ||    
T  15542904 tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattga--tgtt 15543001  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  15543002 caaaggagttcaacaaattagggttccca 15543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 11989239 - 11989465
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||| ||||| || |||||||||||||||||| || | |||||||     
T  11989239 aataatgatctatctctaacttgattacataggttaaacctaatacctagatcagagtcaaaagcgaaggttagtggtcattcaatctctaagatcaatt 11989338  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    || || ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |||||||||||||| |||| ||||| |||| ||| ||    
T  11989339 tgtatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaataaaaactagactttcattg-ata-tt 11989436  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  11989437 caaaggagttcaacaaattagggttccca 11989465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 14616850 - 14617073
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||||||| || | |||||||     
T  14616850 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccatggttagtggtcattcaatctctaagatcaatt 14616949  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| ||||| ||||  ||||| ||||||||||||||||||||||||| || ||||||||||| || |||| ||||| |||| ||||||    
T  14616950 tgcatattcataaagttagggttagtattcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactagactttcattg-atattt 14617048  T
Q  200 caaaggagttcaacaaattagggttc 225  Q
     |||||||||||||||| ||||||||    
T  14617049 -aaaggagttcaacaaactagggttc 14617073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22159568 - 22159342
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||  | ||||| |||||||||||| || |  ||||||     
T  22159568 aataatgatctatctctagtttgattacttaggttaaacctattacctagatcagagtcaaaagccagggttaatggtcattcaatctctaacatcaatt 22159469  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaac-atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt 198  Q
    || || |||||||||||| || |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||| |||| ||||| |||||    |    
T  22159468 tgtatattcataaagctatggttagtagtcgatgataaacaatacaaaaagcattaaacacaaagtaatatgaataaaaactagactttcattga--cat 22159371  T
Q  199 tcaaaggagttcaacaaattagggttccc 227  Q
    |||||||||||||||||||||||||||||    
T  22159370 tcaaaggagttcaacaaattagggttccc 22159342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 34405672 - 34405446
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||  ||| |||||||||||| ||| || | ||||| |     
T  34405672 aataatgatctatctctagcttgattacttaagttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 34405573  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  34405572 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 34405475  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  34405474 caaaggagttcaacaaattagggttccca 34405446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 7650372 - 7650562
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggaggttagtggtcattcaatttccatgatcaatat 100  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||| ||||| |  ||||||||| ||||||| || | ||||||| |    
T  7650372 aataatgatctatctctagcttgattttttaggttaaacttattacctagttctgagtcaaaagcg--gttagtggttattcaatctctaagatcaattt 7650469  T
Q  101 gcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattga 193  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||| ||||||||| || |||| |||||||||||||| ||||| |||||    
T  7650470 gcatattcataaagttagggttagtagtcgatgataaacatacaaaaaacattaaacataaagtaacatgaataaagactagactttcattga 7650562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 39563932 - 39564153
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||||||| ||||||||||    
T  39563932 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcaga-ttaaaagtcagggttagtggtcattcaatttctatgatcaata 39564030  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||  ||    
T  39564031 tgcatattcataaagctagggttaatagtcaatgataaacatacataaagcattaaacacaaggtaatatgaataaagactaaactttcatt-aat-gtt 39564128  T
Q  200 caaaggagttcaacaaattagggtt 224  Q
    |||||||||||||||||||||||||    
T  39564129 caaaggagttcaacaaattagggtt 39564153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22626733 - 22626960
Alignment:
Q  1 aataatgatct-atctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaat 98  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| |||||||||    
T  22626733 aataatgatcttatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaat 22626832  T
Q  99 atgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt 198  Q
    |||||| ||||||| ||||||| || | ||| || ||||||||||| || ||||||| ||||| |||||||||||||| |||||||||| |||||    |    
T  22626833 atgcatattcataacgctagggttaatagtctatcataaacatacataaggcattaagcacaaagtaatatgaataaaaactaaactttcattga--tgt 22626930  T
Q  199 tcaaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||||||||||||||||    
T  22626931 tcaaaggagttcaacaaattagggttccca 22626960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 11138991 - 11139216
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  ||| ||||||| ||||||||||| ||||||||||    
T  11138991 aataatgatctatctctagcttgattactgaggttaaacctattac-tatttcagagttaaaagccagggttagtggccattcaatttctatgatcaata 11139089  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||| ||||||| || | ||  || ||||||||||| || ||||||| ||||| |||||||||||||| |||||||||| |||||    ||    
T  11139090 tgcatattcataacgctagggttaatagtttatcataaacatacataaggcattaagcacaaagtaatatgaataaaaactaaactttcattga--tgtt 11139187  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  11139188 caaaggagttcaacaaattagggttccca 11139216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 13979310 - 13979088
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||  ||||  | ||| |||||||||||||| || | |||||||     
T  13979310 aataatgatctatctccaacttgattacttaagttaaaactattacctagttcagagtcgaaagtcagggtcagtggtcattcaatctctacgatcaatt 13979211  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    |||| ||||||||||||||||  ||| |||||| |||   |||| |||| ||||||||| || |||||||||| |||||||||||||| ||| |  | ||    
T  13979210 tgca-tttcataaagctagggtcagtagtcgatgata---atacgaaaaacattaaacaaaaagtaatatgaaaaaagactaaactttcattta--aatt 13979117  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  13979116 caaaggagttcaacaaattagggttccca 13979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 47412006 - 47411841
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||| |||  ||||| |||||||| ||| | ||||||| | ||| ||    
T  47412006 tctatctctaacttaattacttaggttaaacctattacctagatcagagtcaaaaggcaggactagtgatcattcaagttctaagatcaattttcatatt 47411907  T
Q  108 cataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    ||  ||| ||| |||||| ||| || ||||||||||||| | ||||||||||||||||||||||||    
T  47411906 caagaagttagtgctagtagtcaataataaacatacaaacaacattaaacacaaggtaatatgaat 47411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 35366192 - 35366028
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaag-ggaggttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||   ||| |||||||||||||| ||  | ||||||| ||||  ||    
T  35366192 tctatctctaacttaattacttaggttaaacctattacctagatcagagtcaaaagccaaggctagtggtcattcaagttttaagatcaatttgcacatt 35366093  T
Q  108 cataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    ||  | ||||| |||||| ||| || ||||||||| ||| | ||||||||||||||||||||||||    
T  35366092 cacgatgctagtgctagtagtcaataataaacata-aaacaacattaaacacaaggtaatatgaat 35366028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 2515 - 2290
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||| |||||||||||| | |||| ||||||||||    
T  2515 aataatgatctatctctagcttgattacttaggtcaaacctattacctagttcagagtaaaaagccagggttagtggtcatttattttctatgatcaata 2416  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | || ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||  | ||    
T  2415 tgcatattcataaagctagggttaatagttgatgataaacatacataaagcattaaacacaaagtaatatgaataaagactaaactttcattga--agtt 2318  T
Q  200 caaaggagttcaacaaattagggttccc 227  Q
    ||||||||||||||||||||||||||||    
T  2317 caaaggagttcaacaaattagggttccc 2290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 40017801 - 40017575
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggaggtt-agtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||  ||| | |||||||||||||| || | |||||||     
T  40017801 aataatgatctatctctagcttgattacttaggttaaacttattacctagttcaaagtcaaaagccagggtcagtggtcattcaatctctacgatcaatt 40017702  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| |||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | ||    
T  40017701 tgcatattcataaagatagggtcagtagtcgatgataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactttcattga--aatt 40017604  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  40017603 caaaggagttcaacaaattagggttccca 40017575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16294723 - 16294550
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggag-gttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||||||| ||||||||||    
T  16294723 aataatgatctatctctaacttgattacttaggttaaacctattacatagttcagagttaaaagccagagttagtggtcattcaatttctatgatcaata 16294624  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  16294623 tgcatattcataaagctagggttagtagtcgatgataaacatacacaaagcattaaacacaaggtaatatgaat 16294550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 31528213 - 31527987
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  31528213 aataatgatctatctctagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 31528114  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||| ||||||| || | ||| || |||||| |||| || ||||||| ||||| |||||| ||||||| |||||||||| |||||    ||    
T  31528113 tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaataagaataaaaactaaactttcattga--tgtt 31528016  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  31528015 caaaggagttcaacaaattagggttccca 31527987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 23673766 - 23673992
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggaggt-tagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  |||  ||||||||||||||| || | |||||||     
T  23673766 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagtcagggatagtggtcattcaatctctaagatcaatt 23673865  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||| || ||||||||||| || |||| ||||| |||| ||| ||    
T  23673866 tgcatattcataaagttagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactagactttcattg-ata-tt 23673963  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||| ||||||||    
T  23673964 caaaggagttcaacaaattaaggttccca 23673992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 31626373 - 31626199
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| || |||||||    
T  31626373 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagccagggttagtggtcattcaatttctataatcaata 31626274  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaata 174  Q
    || || ||||||||||||||| || | |||||| ||||||||||| ||| ||||||||||| |||||||||||||    
T  31626273 tgtatattcataaagctagggttaatagtcgatgataaacatacataaaacattaaacacagggtaatatgaata 31626199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 36326746 - 36326522
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| |||||  | |||||||||||||||||| || | |||| ||     
T  36326746 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcaaagtcaaaagccagggttagtggtcattcaatctctaagatcgatt 36326647  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| ||||||  ||||||||||||||||| || ||||||||||| || |||| ||||| |||| ||| ||    
T  36326646 tgcatattcataaagctagggttagtagtcgatgataaac--acaaaaagcattaaacataaagtaatatgaattaaaactagactttcattg-ata-tt 36326551  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||| |||||||||||| |||||||||||    
T  36326550 caaatgagttcaacaaactagggttccca 36326522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 13709894 - 13709721
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||| |||||||||||||||| |||||||| ||| |||||| ||||||| ||||   ||| |||||||||||||||| || | |||||||     
T  13709894 aataatgatctatatctagcttgattacttgggttaaacttatcacctaggtcagagtcaaaatccagggttagtggtcattcaatctctaagatcaatt 13709795  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    | ||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |||||||||||    
T  13709794 tacatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaat 13709721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32576108 - 32576331
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| |||||  | ||| |||| ||||||||| |  | |||||||     
T  32576108 aataaagatctatctttagcttgattatttaggttaaacatattacctagttcatagtcaaaagacagggtcagtgatcattcaatctatacgatcaatt 32576207  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| ||||   ||| ||| || |||||||| ||||||||||| |||| || |||||||| |||||||||||||||| |||||  | ||    
T  32576208 tgcatattcataaagttaggatcagtagtcaatgataaacatgcaaaaagcatt-aacaaaaagtaatatggataaagactaaactttcattga--aatt 32576304  T
Q  200 caaaggagttcaacaaattagggttcc 226  Q
    |||||||||||||||||||||||||||    
T  32576305 caaaggagttcaacaaattagggttcc 32576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 7e-70; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 16883500 - 16883277
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| || | |||||||     
T  16883500 aataatgatctatctctagcttgattacttaggttaaacttattacctagttcagagtcaaaagtgagggttagtggtcattcaatctctaagatcaatt 16883401  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||| | || |||| |||||||||||||| ||||| |||| ||| ||    
T  16883400 tgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaagataaagtaacatgaataaagactagactttcattg-ata-tt 16883303  T
Q  200 caaaggagttcaacaaattagggttc 225  Q
    ||||||||||||||||||||||||||    
T  16883302 caaaggagttcaacaaattagggttc 16883277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22247382 - 22247158
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  22247382 aataatgatctatctctagcttgattacttaggttaaacctattacctggttcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 22247283  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| |||||||||||| || || | ||| || ||||||||||| || |||||||||||||||||||||||||||| || ||||||| |||||    ||    
T  22247282 tgcatattcataaagctatggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaaccaaactttcattga--tgtt 22247185  T
Q  200 caaaggagttcaacaaattagggttcc 226  Q
    |||| ||||||||||||||||||||||    
T  22247184 caaaagagttcaacaaattagggttcc 22247158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22221547 - 22221323
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||  ||| ||||||||||||||||||| ||||||||||    
T  22221547 aataatgatctatctctagcttgattacttaggttaaacctattaccttttttagatttaaaagccagggttagtggtcattcaatttctatgatcaata 22221448  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | ||| || ||||||||||| || |||||||||||||||||||||||||||| |||||||||| |||||    ||    
T  22221447 tgcatattcataaagctagggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattga--tgtt 22221350  T
Q  200 caaaggagttcaacaaattagggttcc 226  Q
    |||| ||||||||||||||||||||||    
T  22221349 caaaagagttcaacaaattagggttcc 22221323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 13017611 - 13017837
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||  ||| ||||||||||||||||||| ||||||||||    
T  13017611 aataatgatctatctctaacttgattacttaggttaaacctattacctaattcagagttaagagccagggttagtggtcattcaatttctatgatcaata 13017710  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatat-t 198  Q
    ||||| ||||||| ||||||| || | ||| || |||||| |||| || ||||||| ||||| |||||||||||||| |||||||||| |||   ||| |    
T  13017711 tgcatattcataacgctagggttaatagtctatcataaacgtacataaggcattaagcacaaagtaatatgaataaaaactaaactttcatt---tatgt 13017807  T
Q  199 tcaaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||||||||||||||||    
T  13017808 tcaaaggagttcaacaaattagggttccca 13017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 20527584 - 20527810
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||| |||||||||||||||| || |  ||||||     
T  20527584 aataatgatctatctctagcttgattacttaggttaaacttattacctagttcagagtcaaaagccagggttagtggtcattcaatctctaaaatcaatt 20527683  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||  |||||| ||||||||||||||||||||||| | || |||||||||||||||| || ||||| |||| ||| ||    
T  20527684 tgcatattcataaagctagggttaggagtcgatgataaacatacaaaaagcattaaatataaagtaatatgaataaagattagactttcattg-ata-tt 20527781  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||| |||| ||||||||    
T  20527782 caaaggagttcaacacattaaggttccca 20527810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 1838298 - 1838071
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  | |||||||||||||||||| || |  ||||||     
T  1838298 aataatgatctatctctagcttgattacttaggttaaacctattacctagatcagagtcaaaagtcagggttagtggtcattcaatctctaacatcaatt 1838199  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaac-atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt 198  Q
    ||||| ||||||||| ||||| |||| |||||| |||||| |||||||||||||| ||||||| |||||||||||||| |||| ||||| |||||    |    
T  1838198 tgcatattcataaagttagggttagtagtcgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaaaactagactttcattga--cat 1838101  T
Q  199 tcaaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||| |||||||||||||||    
T  1838100 tcaaaggagttcaataaattagggttccca 1838071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14790442 - 14790216
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||| ||| || | ||||| |     
T  14790442 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 14790343  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  14790342 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 14790245  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  14790244 caaaggagttcaacaaattagggttccca 14790216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14795470 - 14795244
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||| ||| || | ||||| |     
T  14795470 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 14795371  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  14795370 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 14795273  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  14795272 caaaggagttcaacaaattagggttccca 14795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 19665089 - 19665312
Alignment:
Q  5 atgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaatatgca 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||  | |||||||| ||||||||| || |  |||||| ||||    
T  19665089 atgatctatctctatcttgattacttaggttaaacctattacctagatcagaattaaaagtcagggttagtgatcattcaatctctaacatcaatttgca 19665188  T
Q  104 ttttcataaagctagggctagtggtcgattataaac-atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaa 202  Q
    | ||||||||||||||| |||| |||||| |||||| |||||||||||||| ||||||| |||||||||||||| |||| ||||| |||||    |||||    
T  19665189 tattcataaagctagggttagtagtcgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaaaactagactttcattga--cattcaa 19665286  T
Q  203 aggagttcaacaaattagggttccca 228  Q
    | ||||||||||||||||||||||||    
T  19665287 atgagttcaacaaattagggttccca 19665312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 15534912 - 15534686
Alignment:
Q  2 ataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaag-ggaggttagtggtcattcaatttccatgatcaatat 100  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||||||   || |||||||||| ||||| || |  |||||| |    
T  15534912 ataatgatctatcactagcttgattacttatgttaaacctattaccaagatcagagttaaaagtcaagtttagtggtcactcaatctctaacatcaattt 15534813  T
Q  101 gcattttcataaagctagggctagtggtcgattataaac-atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
     ||| ||||||||||||||| |||| |||||| |||||| |||||||||||||| ||||||| |||||||||||||| |||| ||||| |||||    ||    
T  15534812 tcatattcataaagctagggttagtagtcgatgataaacaatacaaaaagcatttaacacaaagtaatatgaataaaaactagactttcattga--catt 15534715  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  15534714 caaaggagttcaacaaattagggttccca 15534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32704676 - 32704901
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||| |||||  | |||||||||||||| ||| || | ||||| |     
T  32704676 aataatgatctatctctatcttgattacttaggttaaacttattacttagatcagagtcaaaagccagggttagtggtcatttaatctctaagatcagtt 32704775  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||| ||||||||| || ||||| ||| | || |||| ||||| |||| ||| ||    
T  32704776 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaaacattaaacataaagtaat-tgacttaaaactagactttcattg-ata-tt 32704872  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  32704873 caaaggagttcaacaaattagggttccca 32704901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32427190 - 32426969
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggag-gttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||   || ||||||||||||||||| || | |||| ||     
T  32427190 aataatgatctatctctagattgattacttaggttaaacttattacctagatcag--tcaaaatccagagttagtggtcattcaatctctaagatcgatt 32427093  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    |||||  || |||||| |||| ||||||||||| ||||||||||||||||||||||||| || ||||||| ||| || |||| ||||| |||| ||| ||    
T  32427092 tgcatactcctaaagccagggttagtggtcgatgataaacatacaaaaagcattaaacataaagtaatataaattaaaactagactttcattg-ata-tt 32426995  T
Q  200 caaaggagttcaacaaattagggttc 225  Q
    ||||||||||||||||| ||||||||    
T  32426994 caaaggagttcaacaaactagggttc 32426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 12983808 - 12983989
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||  | || |||||||||||||| ||| | ||||| | ||||| ||    
T  12983808 tctatctctagcttaattacttaggttaaacatattacctagatcagagtcaaaagtcagggctagtggtcattcaagttctaagatcagtttgcatatt 12983907  T
Q  108 cataaa-gctagggctagtggtc--gattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactt 186  Q
    || ||| ||||| ||||||  ||   || ||||||||||| | |||||||||||||||||||||||||| || |||| ||||    
T  12983908 caaaaacgctagtgctagtactcaatataataaacatacagacagcattaaacacaaggtaatatgaattaaaactagactt 12983989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 12980921 - 12981089
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||  | || |||||||||||||| ||| | ||||| | ||||| ||    
T  12980921 tctatctctagcttaattacttaggttaaacatattacctagatcagagtcaaaagtcagggctagtggtcattcaagttctaagatcagtttgcatatt 12981020  T
Q  108 cataaa-gctagggctagtggtc--gattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    || ||| ||||| |||||| |||   || ||||||||||| | | ||||||||||||||||||||||||    
T  12981021 caaaaacgctagtgctagtagtcaatataataaacatacagacaacattaaacacaaggtaatatgaat 12981089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 15537966 - 15537881
Alignment:
Q  140 atacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||| || || ||| |||||||||| | || ||||| |||||    |||||||||||||||||||||||||||||||    
T  15537966 atacaaaaagcattaa-cataaagtactatgaataaaaattagactttcattgaca--ttcaaaggagttcaacaaattagggttccca 15537881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 12171806 - 12171582
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||  ||| ||||||||||||||||||| ||||||||||    
T  12171806 aataatgatctatctctagcttgattacttaggttaaacctattacctaattaagaattaaaagccagggttagtggtcattcaatttctatgatcaata 12171707  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| || | ||| || ||||||||||| || |||||||||||||||||||||||||||| |||||||||| |||||    ||    
T  12171706 tgcatattcataaagctagggttaatagtctatcataaacatacataaggcattaaacacaaggtaatatgaataaaaactaaactttcattga--tgtt 12171609  T
Q  200 caaaggagttcaacaaattagggttcc 226  Q
    ||||||||||||||||||| |||||||    
T  12171608 caaaggagttcaacaaatttgggttcc 12171582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26063115 - 26063341
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||  ||| |||||||||||||||| || |  ||||||     
T  26063115 aataatgatcaatctctagcttgattacttaggttaa-cctattacctagatcagagtcaaaagccagggttagtggtcattcaatctctaacatcaatt 26063213  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaaca-tacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt 198  Q
    ||||| ||||||||||||||| || | |||||| ||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||| |||||    |    
T  26063214 tgcatattcataaagctagggttattagtcgatgataaacaatacaaaaagcattaaacacaaagtaatatgaataaaaactagactttcattga--cat 26063311  T
Q  199 tcaaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||||| ||||||||||    
T  26063312 tcaaaggagttcaacaaatcagggttccca 26063341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 647625 - 647851
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | ||||||||| |||| ||| || | ||||| |     
T  647625 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggccatttaatctctaagatcagtt 647724  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  647725 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 647822  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  647823 caaaggagttcaacaaattagggttccca 647851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 26060411 - 26060192
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||  | |||||||||||||||||| || | |||||||     
T  26060411 aataatggtctatctctagcttgattacttaagttaaacatattacctagatcagagtcaaaagtcatggttagtggtcattcaatctctaagatcaatt 26060312  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    || || ||||| ||||||||| |||| |||||| ||||||||||||||||||||||||| || ||||||||||||||  ||| |||||||||| ||| ||    
T  26060311 tgtatattcatgaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaataaaatctagacttttattg-ata-tt 26060214  T
Q  200 caaaggagttcaacaaattagg 221  Q
    |||| |||||||||||| ||||    
T  26060213 caaaagagttcaacaaactagg 26060192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 650897 - 651117
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | ||||||||| |||| ||| || | ||||| |     
T  650897 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggccatttaatctctaagatcagtt 650996  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| ||||| |||    | || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  650997 tgcatattcataaagttagggttaggaaacaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 651094  T
Q  200 caaaggagttcaacaaattaggg 222  Q
    |||||||||||||||||||||||    
T  651095 caaaggagttcaacaaattaggg 651117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 2541700 - 2541483
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggag-gttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||||||| |||||||||||||||| |   ||||||||||||||||||||   | ||||||||||| |||| ||| | |||||   ||||   |    
T  2541700 tctatctctagcttaattacttaggttaaacattccacctagttcagagttaaaagccggtgttagtggtcaatcaagttctaagatcagcctgcaaact 2541601  T
Q  108 cataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaaggag 207  Q
     || |||||||| || || ||| || |||||||||| |||| ||||||||||||| ||||||||||||| |||| ||||||||||   || | ||||||     
T  2541600 tatcaagctaggacttgtagtcaataataaacatacgaaaatcattaaacacaagataatatgaataaaaactagacttttattg---atatgaaaggaa 2541504  T
Q  208 ttcaacaaattagggttccca 228  Q
    ||||||||||||| |||||||    
T  2541503 ttcaacaaattagagttccca 2541483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7414 - 7639
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||  ||| |||||||||| |||| ||| ||||||||||    
T  7414 aataatgatctatctctagctttattacttaggttaaacctattacctagttctgagtaaaaagccagggttagtggtcaatcaaattctatgatcaata 7513  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatat-t 198  Q
    ||||| ||||||||||||||| || | |||||| ||||||||||| |||||||||||| ||| |||||||||||||| |||||||||| |||   ||| |    
T  7514 tgcatattcataaagctagggttaatagtcgatgataaacatacataaagcattaaactcaaagtaatatgaataaaaactaaactttcatt---tatgt 7610  T
Q  199 tcaaaggagttcaacaaattagggttccc 227  Q
    |||||||||||||||||||||||||||||    
T  7611 tcaaaggagttcaacaaattagggttccc 7639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 13493086 - 13492860
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||| || | |||||||     
T  13493086 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattcaatctctaagatcaatt 13492987  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || ||||||||||| || |||| ||||| |||| ||| ||    
T  13492986 tgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactagactttcattg-ata-tt 13492889  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||| |||||||||||    
T  13492888 caaaggagttcaacaaactagggttccca 13492860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 13495811 - 13495585
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||| || | |||||||     
T  13495811 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagctagggttagtggtcattcaatctctaagatcaatt 13495712  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || ||||||||||| || |||| ||||| |||| ||| ||    
T  13495711 tgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactagactttcattg-ata-tt 13495614  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||| |||||||||||    
T  13495613 caaaggagttcaacaaactagggttccca 13495585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 27282529 - 27282755
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||   ||| |||||||||||||||| || | |||||||     
T  27282529 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaatccagggttagtggtcattcaatctctaagatcaatt 27282628  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    | ||| ||||||||||||||| |||| |||||| ||||| |||||||||| |||||||| || ||||||||||| || |||| ||||| |||| ||| ||    
T  27282629 ttcatattcataaagctagggttagtagtcgatgataaagatacaaaaaggattaaacataaagtaatatgaattaaaactagactttcattg-ata-tt 27282726  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||| ||||||||||||||||||||||    
T  27282727 caaaggtgttcaacaaattagggttccca 27282755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16190593 - 16190822
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||  | ||||||||||||| |||| || | |||||||     
T  16190593 aatattgatctatctctaacttgattacttaggttaaacttattacctagatcagagttaaaagccaaggttagtggtcatccaatctctaggatcaatt 16190692  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt- 198  Q
    ||||| |||||||||||| || |||| |||||| ||||||||||||||||||||||||| || ||||||| ||| || |||| ||||| |||| |||||     
T  16190693 tgcatattcataaagctaaggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatataaattaaaactagactttcattg-atattc 16190791  T
Q  199 ---tcaaaggagttcaacaaattagggttcc 226  Q
       | ||||||||||||||||||||||||||    
T  16190792 aaattaaaggagttcaacaaattagggttcc 16190822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22104791 - 22104956
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||  ||||||||||||||||||| ||||||||||    
T  22104791 aataatgatctatctctagcttgattacttaggttaaacctattacatagttcagagttaaaaaccagaattagtggtcattcaatttctatgatcaata 22104890  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggta 165  Q
    ||||| ||||||||||||| | |||| |||||| |||||| |||| ||| ||||||||||||||||    
T  22104891 tgcatattcataaagctagagttagtagtcgatgataaacctacacaaaacattaaacacaaggta 22104956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 34066168 - 34065942
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||  ||| |||||||||||| ||| || | |||||||     
T  34066168 aataatgatctatctctaacttgattacttaggttaaacttattacctaggtcagagtcaaaagccagggttagtggtcatttaatctctaagatcaatt 34066069  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| |||||| |||||||||||||||||| || ||||||||||| || |||| | ||| |||| ||| ||    
T  34066068 tgcatattcataaagctagggttagtagtcgatgataaacgtacaaaaagcattaaacataacgtaatatgaattaaaactagattttcattg-ata-tt 34065971  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    ||||  |||||||||||||||| ||||||    
T  34065970 caaaaaagttcaacaaattaggattccca 34065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 1936451 - 1936225
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| | ||| | |  ||||  | |||||||||||||| ||| || | |||||||     
T  1936451 aataatgatctatctctagcatgattacttaggttaaacttattacctggatcaaattcgaaagccatggttagtggtcatttaatctctaagatcaatt 1936352  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    | ||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||| || ||||||||||| || |||| ||||  |||| ||| ||    
T  1936351 ttcatattcataaagttagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaatatgaattaaaactagacttccattg-ata-tt 1936254  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||| ||||||||    
T  1936253 caaaggagttcaacaaattatggttccca 1936225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32506276 - 32506501
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||| || | |||| ||     
T  32506276 aataatgacctatctctagcttgattacttaagttaaacttattacctagatcagagtcaaaagtcagggttagtggtcattcaatctctaagatcgatt 32506375  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatt- 198  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||| ||||||||| || |||||||   | || |||| ||||| |||| |||||     
T  32506376 tgcatattcataaagctagggttagtagtcgatgataaacatacaaaaaacattaaacataaagtaatat---ttaaaactagactttcattg-atattc 32506471  T
Q  199 tcaaaggagttcaacaaattagggttccca 228  Q
      |||||||||||||||| |||||||||||    
T  32506472 aaaaaggagttcaacaaactagggttccca 32506501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 23990510 - 23990735
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttc--cat--gatc 95  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| |||||  | |||||||||||||||||| ||   ||  ||||    
T  23990510 aataatgatcaatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaagccagggttagtggtcattcaatctcttaattagatc 23990609  T
Q  96 aatatgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaat 195  Q
    ||| ||||| |||||||||||     |||| ||| || ||||||||||||||| |||| || | ||  |||| ||||| || |||| || ||| || |||    
T  23990610 aatttgcatattcataaagct-----tagtagtcaatgataaacatacaaaaaacattgaagataatataatgtgaattaaaactagac-tttcttaaat 23990703  T
Q  196 atttcaaaggagttcaacaaattagggttccca 228  Q
    | |||| |||||||||||||||||| |||||||    
T  23990704 a-ttcagaggagttcaacaaattagtgttccca 23990735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 10759811 - 10759719
Alignment:
Q  134 ataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaaggagttcaacaaattagggttccca 228  Q
    ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | ||| |||| |||||||||||||||||||||||||||||    
T  10759811 ataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatga-tatt-caaaggagttcaacaaattagggttccca 10759719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39546066 - 39546004
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaa 63  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||    
T  39546066 aataatgatctatctctagcttgattacttaagttaaacttattacctagatcagagtcaaaa 39546004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 15297148 - 15296980
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggag-gttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||| ||| ||||||||||||||| ||||||||||| ||||| | |||||  || | |||||||||||||| ||| | ||||||| ||||| ||    
T  15297148 tctatctctaacttaattacttaggttaaaactattacctagatcagattcaaaagccagagctagtggtcattcaagttctaagatcaatttgcatatt 15297049  T
Q  108 cataaa-gctagggctagtggtc--gattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    || ||| ||||| |||||| | |   || ||||||||  ||| | ||||||||||||||||||||||||    
T  15297048 caaaaatgctagtgctagtagacaatataataaacattgaaacaacattaaacacaaggtaatatgaat 15296980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 22456920 - 22457100
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    ||||||||| |||| ||||||||||||||||||||||||||   |||||| |||||  | || |||||||||||||| ||| | ||||| | ||||| ||    
T  22456920 tctatctcttgcttaattacttaggttaaacctattacctaaaacagagtcaaaagtcagggctagtggtcattcaagttctaagatcagtttgcatatt 22457019  T
Q  108 cataaa-gctagggctagtggtc--gattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactt 186  Q
    || ||| ||||| |||||| |||   || ||||||||||||| | |||| |||| |||||||||||||| || |||| ||||    
T  22457020 caaaaacgctagtgctagtagtcaatataataaacatacaaacaacattgaaca-aaggtaatatgaattaaaactagactt 22457100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 21153071 - 21152906
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaatatgcatttt 107  Q
    |||||||||||||| |||||||||||||||  |||| ||||| ||||||| |||||  | || |||||||||||||| ||| | | ||||| | ||  ||    
T  21153071 tctatctctagcttaattacttaggttaaatatattccctagatcagagtcaaaagtcagggctagtggtcattcaagttctaagttcaatttacacatt 21152972  T
Q  108 cataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaat 173  Q
    ||  | ||||| |||||| ||| || ||||||||| ||| | ||||||||| |||| |||||||||    
T  21152971 caagatgctagtgctagtagtcaatcataaacatataaacaacattaaacagaaggaaatatgaat 21152906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 22453565 - 22453641
Alignment:
Q  9 tctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaa 84  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||  | || ||||||||||||||    
T  22453565 tctatctctagcttaattacttaggttaaacctattacctaaatcagagtcaaaagccagggctagtggtcattcaa 22453641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 49147797 - 49147745
Alignment:
Q  134 ataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaactt 186  Q
    ||||||||||||| | |||||||||||||||||||||||| || |||| ||||    
T  49147797 ataaacatacaaacaacattaaacacaaggtaatatgaattaaaactagactt 49147745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 6232 - 6457
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggagg-ttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||| |||||  ||| |||||||||||||||| || | |||||||     
T  6232 aataatgatctatctctaggttgattacttagattaaacttattacctagttcagagtcaaaagtcagggttagtggtcattcaatctctaagatcaatt 6331  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |||| ||||||||| |||  ||||| |||| ||| ||    
T  6332 tgcatattcataaagctagggttagtagtcgatgataaacatacaaaaagcattaaacataaagtaacatgaataaacact-gactttcattg-ata-tt 6428  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||| ||||||||    
T  6429 caaaggagttcaacaaattaaggttccca 6457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 3025 - 3248
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  | |||||||| |||||||| |||  ||||||||     
T  3025 aataatgatctatctctagcttgattacttaggttaaacgtattacctagttcagagttgaaagccatggttagtgttcattcaaattctgtgatcaatt 3124  T
Q  100 tgcattttcat-aaagctagggctagtggtcgattataaacatacaaaaagcattaaacaca---aggtaatatgaataaagactaaacttttattgaat 195  Q
    ||||| ||||| |||||||||| |||| |||||| ||||||||||||||| |||||||||||   | ||||||||| ||||||||||||||| ||| |      
T  3125 tgcatattcataaaagctagggttagtagtcgatgataaacatacaaaaaacattaaacacaaagaagtaatatgagtaaagactaaactttcattta-- 3222  T
Q  196 atttcaaaggagttcaacaaattagg 221  Q
    | |||||| |||||||||||||||||    
T  3223 aattcaaatgagttcaacaaattagg 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 12575721 - 12575945
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| | ||| ||| |||||  | ||||||| |||||||||| || | |||||||     
T  12575721 aataatgatctatctctaacttgattacttatgttaaacctattaccttgatcaaagtcaaaagccaaggttagtagtcattcaatctctaagatcaatt 12575820  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||| |||||||||| || ||| ||||| ||||||||||| || ||||||| |||||||||||||| |||| ||||| |||| ||| ||    
T  12575821 tgcatattcataaagttagggctagttgttgatgataaagatacaaaaagcgttgaacacaaagtaatatgaataaaaactagactttcattg-ata-tt 12575918  T
Q  200 caaaggagttcaacaaattagggttcc 226  Q
    |||||||||||||||||||||||||||    
T  12575919 caaaggagttcaacaaattagggttcc 12575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 44008122 - 44007909
Alignment:
Q  4 aatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagggag-gttagtggtcattcaatttccatgatcaatatgc 102  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| | |||||  || || |||| ||||||||| || | | ||||| |||    
T  44008122 aatgatctatttctagcttgattagttaggttaaacttattacctagttcagaatcaaaagccagagtcagtgttcattcaatctctacggtcaatttgc 44008023  T
Q  103 attttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaa 202  Q
    ||||||||||||||||||  | | |||||| ||||||||| ||||||||||||||| |  |||||| |||||||||||||||||| |||||  | |||||    
T  44008022 attttcataaagctagggtcaatagtcgatgataaacata-aaaaagcattaaacaaagagtaataagaataaagactaaactttaattga--aattcaa 44007926  T
Q  203 aggagttcaacaaatta 219  Q
    |||||||||||||||||    
T  44007925 aggagttcaacaaatta 44007909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 13096845 - 13096686
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaagg---gaggttagtggtcattcaatttccatgatcaa 97  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||   |  ||||||| ||||||||| || | ||||||    
T  13096845 aataatgatctatctctagcttgattacttagcttaaacttattacctaggtcagagttaaaaggccaggagttagtgatcattcaatctctaagatcaa 13096746  T
Q  98 tatgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaaca 158  Q
    | ||||| ||||||||||||||| |||| |||||| |||||||||| ||||||||||||||    
T  13096745 tttgcatattcataaagctagggatagtagtcgatgataaacatac-aaaagcattaaaca 13096686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 41779220 - 41779318
Alignment:
Q  122 tagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatatttcaaaggagttcaacaaattagg 221  Q
    ||||||||||| ||||||||||||||||||||||||| || |||| ||| |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  41779220 tagtggtcgatgataaacatacaaaaagcattaaacataaagtaacatggataaagactaaactttcattg-atattt-aaaggagttcaacaaattagg 41779317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41779156 - 41779213
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagt 58  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41779156 aataatgatctatctctagcttgattacttaggttaaacttattacctagttcagagt 41779213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 66 - 292
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||   | ||||||| |||||| ||| || | ||||| |     
T  66 aataatgatctatctctagcttgattacttaggttaaacttattacctagatcagagtcaaaaaccagggttagtagtcatttaatctctaagatcagtt 165  T
Q  100 tgcattttcataaagctagggctagtggtcgattataaacatacaaaaagcattaaacacaaggtaatatgaataaagactaaacttttattgaatattt 199  Q
    ||||| ||||||||||||||| |||| ||| || ||||||||||||||||||| ||||| || ||||||||||| || |||| ||||| | || ||| ||    
T  166 tgcatattcataaagctagggttagtagtcaatgataaacatacaaaaagcataaaacataaagtaatatgaattaaaactagactttcaatg-ata-tt 263  T
Q  200 caaaggagttcaacaaattagggttccca 228  Q
    |||||||||||||||||||||||||||||    
T  264 caaaggagttcaacaaattagggttccca 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24605 - 24722
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcattcaatttccatgatcaata 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  24605 aataatgatatatctctagcttgattacttaggttaaacctattacctggttcagagttaaaagccagggttagtggtcattcaatttctatgatcaata 24704  T
Q  100 tgcattttcataaagcta 117  Q
    ||||| ||||||||||||    
T  24705 tgcatattcataaagcta 24722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9686 - 9606
Alignment:
Q  1 aataatgatctatctctagcttgattacttaggttaaacctattacctagttcagagttaaaaggga-ggttagtggtcat 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||    
T  9686 aataatgatctatctttagcttgattacttaggttaaacctattacctaattcagagttaaaagccagggttagtggtcat 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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