View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3352_low_2 (Length: 614)

Name: NF3352_low_2
Description: NF3352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3352_low_2
NF3352_low_2
[»] chr2 (43 HSPs)
chr2 (10-595)||(21731936-21732517)
chr2 (352-453)||(21733603-21733706)
chr2 (350-429)||(43380753-43380834)
chr2 (344-424)||(17330100-17330183)
chr2 (352-429)||(32765105-32765184)
chr2 (352-428)||(31442519-31442597)
chr2 (355-429)||(14704176-14704252)
chr2 (355-429)||(39016259-39016335)
chr2 (352-429)||(7412280-7412359)
chr2 (352-429)||(31443101-31443180)
chr2 (366-429)||(2910284-2910347)
chr2 (355-423)||(24459336-24459406)
chr2 (366-429)||(43381047-43381110)
chr2 (355-429)||(24458231-24458307)
chr2 (355-425)||(31090328-31090400)
chr2 (377-429)||(33163314-33163366)
chr2 (352-424)||(12010227-12010301)
chr2 (355-423)||(39015176-39015246)
chr2 (355-423)||(40000217-40000287)
chr2 (352-405)||(26585264-26585318)
chr2 (344-429)||(5914888-5914976)
chr2 (366-425)||(7073834-7073894)
chr2 (377-429)||(12004853-12004905)
chr2 (373-425)||(33161979-33162031)
chr2 (354-422)||(11985860-11985930)
chr2 (350-429)||(2911363-2911444)
chr2 (366-429)||(39256875-39256940)
chr2 (352-410)||(18676698-18676758)
chr2 (355-429)||(31091403-31091479)
chr2 (377-429)||(12003782-12003834)
chr2 (352-425)||(12396173-12396248)
chr2 (352-429)||(17466685-17466763)
chr2 (366-429)||(12011347-12011410)
chr2 (256-322)||(2910179-2910245)
chr2 (354-424)||(9615575-9615646)
chr2 (352-410)||(14886645-14886705)
chr2 (259-316)||(33161849-33161906)
chr2 (352-414)||(34037544-34037608)
chr2 (366-429)||(39999134-39999194)
chr2 (377-429)||(8420806-8420858)
chr2 (455-491)||(18675459-18675495)
chr2 (455-491)||(31090492-31090528)
chr2 (352-405)||(37607290-37607345)
[»] chr3 (42 HSPs)
chr3 (377-506)||(3671246-3671375)
chr3 (355-429)||(55388230-55388306)
chr3 (355-429)||(48808543-48808619)
chr3 (355-429)||(55389345-55389421)
chr3 (352-452)||(3693973-3694075)
chr3 (352-429)||(47117948-47118026)
chr3 (355-429)||(36279123-36279199)
chr3 (355-429)||(52318193-52318269)
chr3 (366-425)||(33837347-33837406)
chr3 (344-429)||(47075247-47075335)
chr3 (352-429)||(20464257-20464336)
chr3 (355-429)||(48574335-48574411)
chr3 (355-429)||(53957844-53957920)
chr3 (355-429)||(53958976-53959052)
chr3 (352-429)||(19114681-19114759)
chr3 (377-429)||(36827331-36827383)
chr3 (352-429)||(47428459-47428538)
chr3 (352-429)||(48809531-48809610)
chr3 (366-429)||(36280193-36280256)
chr3 (352-427)||(33427899-33427976)
chr3 (355-429)||(17700690-17700766)
chr3 (373-426)||(17701808-17701861)
chr3 (355-429)||(45600835-45600911)
chr3 (355-429)||(48573156-48573232)
chr3 (366-429)||(33837544-33837607)
chr3 (366-425)||(40317954-40318013)
chr3 (352-429)||(2591793-2591873)
chr3 (352-429)||(33428331-33428410)
chr3 (353-398)||(40206071-40206118)
chr3 (352-429)||(45599052-45599131)
chr3 (457-491)||(17700855-17700889)
chr3 (256-322)||(36280295-36280361)
chr3 (366-428)||(47428019-47428081)
chr3 (366-403)||(29188273-29188310)
chr3 (257-322)||(55388153-55388218)
chr3 (377-429)||(2323219-2323271)
chr3 (267-323)||(36827452-36827508)
chr3 (260-316)||(48808449-48808505)
chr3 (455-491)||(48808697-48808733)
chr3 (365-409)||(49261453-49261497)
chr3 (258-322)||(53959078-53959142)
chr3 (455-491)||(55388396-55388432)
[»] chr5 (37 HSPs)
chr5 (355-429)||(2464840-2464916)
chr5 (352-429)||(9537210-9537289)
chr5 (355-426)||(8074621-8074694)
chr5 (352-420)||(578637-578707)
chr5 (344-429)||(18004817-18004905)
chr5 (355-429)||(25590601-25590677)
chr5 (355-429)||(40611431-40611507)
chr5 (355-429)||(40612535-40612611)
chr5 (355-428)||(8075710-8075785)
chr5 (352-429)||(34173448-34173527)
chr5 (355-415)||(4593031-4593093)
chr5 (366-421)||(14889953-14890008)
chr5 (366-429)||(28589883-28589946)
chr5 (355-429)||(545912-545988)
chr5 (355-429)||(32640459-32640535)
chr5 (352-405)||(13651041-13651096)
chr5 (355-423)||(28590994-28591065)
chr5 (352-405)||(31946933-31946988)
chr5 (370-429)||(2314390-2314449)
chr5 (366-429)||(14891023-14891086)
chr5 (366-429)||(32641603-32641666)
chr5 (354-429)||(21069479-21069555)
chr5 (352-425)||(19271530-19271606)
chr5 (366-422)||(16979196-16979252)
chr5 (355-423)||(2466655-2466725)
chr5 (352-428)||(16611876-16611954)
chr5 (352-424)||(19271659-19271733)
chr5 (355-429)||(544819-544895)
chr5 (258-316)||(546020-546078)
chr5 (257-322)||(4592941-4593006)
chr5 (355-429)||(4593977-4594053)
chr5 (258-327)||(18004719-18004788)
chr5 (366-403)||(37072762-37072799)
chr5 (457-490)||(40611596-40611629)
chr5 (457-493)||(544983-545019)
chr5 (352-389)||(9537945-9537984)
chr5 (352-405)||(19183129-19183184)
[»] chr4 (22 HSPs)
chr4 (366-429)||(42278233-42278296)
chr4 (352-429)||(38216634-38216711)
chr4 (352-424)||(4703078-4703152)
chr4 (355-429)||(47874734-47874810)
chr4 (352-429)||(19050424-19050503)
chr4 (352-429)||(20599762-20599841)
chr4 (355-429)||(47878360-47878436)
chr4 (352-429)||(4701951-4702030)
chr4 (356-429)||(53770946-53771021)
chr4 (260-323)||(26170723-26170786)
chr4 (375-429)||(26170856-26170910)
chr4 (366-411)||(6039325-6039370)
chr4 (352-429)||(42391762-42391841)
chr4 (366-404)||(2786427-2786465)
chr4 (256-322)||(26172918-26172986)
chr4 (344-405)||(32244453-32244517)
chr4 (363-411)||(44158706-44158753)
chr4 (366-429)||(53770497-53770560)
chr4 (352-407)||(21622011-21622068)
chr4 (384-429)||(56041182-56041227)
chr4 (372-424)||(39870535-39870587)
chr4 (352-401)||(48739944-48739995)
[»] chr7 (46 HSPs)
chr7 (352-429)||(7509328-7509408)
chr7 (350-429)||(12223555-12223636)
chr7 (350-429)||(24934963-24935044)
chr7 (350-429)||(43461593-43461674)
chr7 (352-429)||(33607370-33607449)
chr7 (366-429)||(7259561-7259624)
chr7 (355-429)||(7258446-7258522)
chr7 (344-425)||(43457627-43457710)
chr7 (355-429)||(44334326-44334402)
chr7 (352-416)||(8048653-8048719)
chr7 (366-429)||(44333321-44333384)
chr7 (355-429)||(30924885-30924961)
chr7 (355-429)||(35728962-35729038)
chr7 (355-429)||(42478146-42478222)
chr7 (355-429)||(48788548-48788624)
chr7 (355-428)||(48647320-48647395)
chr7 (352-428)||(2677104-2677182)
chr7 (366-429)||(10898949-10899012)
chr7 (366-429)||(45584373-45584435)
chr7 (355-429)||(10894514-10894589)
chr7 (380-429)||(45583792-45583841)
chr7 (352-429)||(5929985-5930064)
chr7 (367-423)||(12221486-12221542)
chr7 (366-426)||(19433794-19433854)
chr7 (366-425)||(385510-385568)
chr7 (366-429)||(39708313-39708376)
chr7 (352-424)||(44529194-44529271)
chr7 (366-429)||(48777441-48777504)
chr7 (352-416)||(6680402-6680468)
chr7 (344-411)||(8375497-8375567)
chr7 (366-429)||(46286707-46286770)
chr7 (352-423)||(32793359-32793432)
chr7 (356-411)||(44530511-44530568)
chr7 (366-423)||(35727882-35727939)
chr7 (355-429)||(42477551-42477627)
chr7 (352-429)||(24935569-24935647)
chr7 (352-423)||(385007-385079)
chr7 (256-322)||(10899051-10899117)
chr7 (257-323)||(12223676-12223742)
chr7 (352-425)||(39824317-39824389)
chr7 (352-406)||(24287668-24287724)
chr7 (352-429)||(8047003-8047082)
chr7 (344-416)||(34710272-34710347)
chr7 (267-323)||(39708193-39708249)
chr7 (258-322)||(45584474-45584538)
chr7 (355-429)||(46287263-46287336)
[»] chr1 (35 HSPs)
chr1 (350-429)||(25038067-25038148)
chr1 (350-429)||(25043279-25043360)
chr1 (355-429)||(9339817-9339893)
chr1 (353-429)||(16249832-16249910)
chr1 (355-429)||(32665645-32665722)
chr1 (352-429)||(6613843-6613922)
chr1 (366-429)||(6612614-6612677)
chr1 (366-429)||(26518293-26518356)
chr1 (352-429)||(34088325-34088404)
chr1 (355-429)||(7944326-7944402)
chr1 (355-429)||(9340901-9340977)
chr1 (355-429)||(52439632-52439708)
chr1 (352-429)||(3117837-3117916)
chr1 (352-425)||(22856866-22856941)
chr1 (355-429)||(7945427-7945506)
chr1 (366-428)||(39977536-39977598)
chr1 (355-429)||(52440436-52440512)
chr1 (352-429)||(34085710-34085789)
chr1 (352-407)||(8975347-8975404)
chr1 (352-406)||(11060664-11060720)
chr1 (352-410)||(44720722-44720782)
chr1 (372-429)||(51453595-51453652)
chr1 (354-423)||(11830079-11830150)
chr1 (385-425)||(22857439-22857479)
chr1 (372-408)||(23703898-23703934)
chr1 (352-429)||(39726543-39726621)
chr1 (350-406)||(44719536-44719594)
chr1 (352-424)||(51450188-51450262)
chr1 (352-411)||(1001339-1001400)
chr1 (352-407)||(29766111-29766168)
chr1 (258-323)||(22857556-22857621)
chr1 (482-539)||(32665513-32665570)
chr1 (369-410)||(50107078-50107119)
chr1 (352-405)||(1407816-1407871)
chr1 (393-429)||(5783004-5783040)
[»] chr8 (28 HSPs)
chr8 (355-429)||(1952846-1952922)
chr8 (355-429)||(32898321-32898397)
chr8 (355-429)||(35177565-35177641)
chr8 (352-429)||(5737879-5737958)
chr8 (352-429)||(39138520-39138599)
chr8 (353-424)||(41121294-41121367)
chr8 (352-429)||(41122618-41122697)
chr8 (366-429)||(45476419-45476482)
chr8 (352-425)||(5737030-5737105)
chr8 (366-429)||(28619408-28619471)
chr8 (344-425)||(30134745-30134829)
chr8 (366-423)||(35178687-35178744)
chr8 (344-421)||(2552193-2552272)
chr8 (352-405)||(41754156-41754211)
chr8 (366-429)||(10406390-10406453)
chr8 (355-422)||(10407467-10407536)
chr8 (352-406)||(28524946-28525002)
chr8 (354-404)||(41754687-41754739)
chr8 (377-429)||(8569603-8569655)
chr8 (370-406)||(31075170-31075206)
chr8 (355-412)||(45476353-45476412)
chr8 (344-410)||(24199109-24199179)
chr8 (366-429)||(32563780-32563843)
chr8 (354-416)||(13144530-13144594)
chr8 (352-410)||(28006471-28006531)
chr8 (352-410)||(28063774-28063834)
chr8 (257-322)||(32898423-32898488)
chr8 (459-491)||(5965174-5965206)
[»] scaffold0767 (2 HSPs)
scaffold0767 (352-429)||(5785-5864)
scaffold0767 (355-429)||(6109-6185)
[»] scaffold0016 (1 HSPs)
scaffold0016 (366-429)||(36401-36464)
[»] chr6 (6 HSPs)
chr6 (350-425)||(31239847-31239924)
chr6 (366-429)||(12676347-12676410)
chr6 (352-429)||(19600101-19600179)
chr6 (349-429)||(29845665-29845745)
chr6 (366-429)||(29856949-29857010)
chr6 (352-405)||(30748178-30748233)
[»] scaffold0237 (2 HSPs)
scaffold0237 (349-429)||(1870-1950)
scaffold0237 (366-429)||(3151-3212)
[»] scaffold0369 (1 HSPs)
scaffold0369 (386-429)||(8723-8766)
[»] scaffold0039 (1 HSPs)
scaffold0039 (366-429)||(79277-79340)
[»] scaffold0026 (1 HSPs)
scaffold0026 (377-425)||(92996-93044)


Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 10 - 595
Target Start/End: Original strand, 21731936 - 21732517
Alignment:
Q  10 gcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttggtgattttgagaatgttaaggtagaccatgtctaga 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21731936 gcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttcgtgattttgagaatgttaaggtagaccatgtctaga 21732035  T
Q  110 acttaacaaaaggcatctgatcgcgcgctacttacacacatgaaatgaaactgcacttggaaaagagaattcaaatgagcaaatagtcactttaatcct- 208  Q
    ||||||| |||||||||||||||||||||||||||  |||  | ||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||     
T  21732036 acttaaccaaaggcatctgatcgcgcgctacttacttaca-cacatgaaactgcacttggaaaagagaattcaaacgagcaaatagtcgcttttttcctg 21732134  T
Q  209 actttacacctcgttatcacaaaggtccgact----attaaatataaaagttctgactctgtacttccgttgttactttagtccatgttgttaaaaaatt 304  Q
    ||||| ||||||||||||||||||||||||||    |||||||| |||     |||||||||||||||||| |||||||||| |   | ||| ||||||     
T  21732135 actttgcacctcgttatcacaaaggtccgactcaggattaaatacaaataagttgactctgtacttccgttattactttagttc--ctcgttgaaaaatg 21732232  T
Q  305 ttgttaagtgataatgtg--atatattttatgctgagtatcgtca-cagaactaaagtgaaagt--aaaatggtcactttggtccctgaaccgaaaatca 399  Q
     || ||||||||||||||  | ||||||||||||||||||||||| | | ||||||||||||||  |||||||||||||||||||||||||| ||||| |    
T  21732233 ctggtaagtgataatgtggcacatattttatgctgagtatcgtcaccgggactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatta 21732332  T
Q  400 atatccccaaattgaatctcaaatccctaacggtaaacacgaattttcactaagattcctgactgtacatacttactatcaattaggtccctaattgcac 499  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||    
T  21732333 atatccccaaattgaatctcaaatccctaacggtaaacacgaaatttcactaagatccctgactgtacatacttactatcagttagatccctgattgcac 21732432  T
Q  500 atacttactatcagttagatcctcgacagtaaatatgaaaatggcgtaataatggttgaatagtataggagtggccgaataaaaaccagagttata 595  Q
    |||||||||| ||||||| ||| ||||| |||| | |||||||||           ||||||||||||||||||| ||||||||||||||||||||    
T  21732433 atacttactaccagttaggtccccgacaataaacacgaaaatggc-----------tgaatagtataggagtggctgaataaaaaccagagttata 21732517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 21733706 - 21733603
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaacggtaaacacgaattttcac 449  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||    
T  21733706 actaaagtgaaagtaaaaaatggtcactttggtctctgaaccgaaaatcaatattcccaaattgaatctcaaatccctaacagtaaacacaaaatttcac 21733607  T
Q  450 taag 453  Q
    ||||    
T  21733606 taag 21733603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 43380753 - 43380834
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  43380753 gaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaattcctaa 43380834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 17330183 - 17330100
Alignment:
Q  344 gtcacaga-actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  17330183 gtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatc 17330100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 32765105 - 32765184
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32765105 actaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 32765184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 31442519 - 31442597
Alignment:
Q  352 actaaagtgaaagt--aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    ||||||||||||||  ||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31442519 actaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatccctaaattgaatctcaaatcccta 31442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 14704176 - 14704252
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  14704176 aaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 14704252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 39016335 - 39016259
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| |||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||    
T  39016335 aaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatgaaatccctaa 39016259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 7412280 - 7412359
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| ||  |||||||||||||| ||||| |||| |||| ||||||||| ||||||||||||||||||||||    
T  7412280 actaaagtgaaaatagaaaatggtcactttgttccctcaaccaaaaaacaatatccctaaattgaatctcaaatccctaa 7412359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 31443180 - 31443101
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||| |||| |||||| ||||||||||||||||||||| ||||||| |||||||||| |||||    
T  31443180 actaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaattaaatctcaaattcctaa 31443101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 2910284 - 2910347
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||||||| |||||| |||||||||||||||||||||||| || |||||||||    
T  2910284 aaaatgatcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaa 2910347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 24459406 - 24459336
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||  |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||    
T  24459406 aaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaat 24459336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 43381110 - 43381047
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||| |||| ||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  43381110 aaaatagtcattttggtccctgaacacaaaatcaatatccctaaattgaatctcaaatccctaa 43381047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 24458231 - 24458307
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||||| || | ||||||||||||| |||||||||| ||| ||||||||    
T  24458231 aaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaa 24458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 425
Target Start/End: Original strand, 31090328 - 31090400
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    ||||||||||||  |||||| | |||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  31090328 aaagtgaaagtagaaaatggccgctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatcc 31090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 33163366 - 33163314
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  33163366 tttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaatctctaa 33163314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 12010227 - 12010301
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||||||||||  ||||||||| ||||||   |||||| |||||||||||||||||||||||| |||||||    
T  12010227 actaaagtgaaagtagaaaatggtcattttggtatatgaaccaaaaatcaatatccccaaattgaatatcaaatc 12010301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 39015176 - 39015246
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||  ||||||||| |||||||| |||||| ||||||||||| |||||||||||| ||||||    
T  39015176 aaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaat 39015246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 40000287 - 40000217
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||  ||||| |||||||||||| |||||| ||||||||||| |||||||||||| ||||||    
T  40000287 aaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaat 40000217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 26585264 - 26585318
Alignment:
Q  352 actaaagtgaaagta-aaatggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  26585264 actaaagtgaaaatagaaatggtcactttggtccctgaaccgaaaataaatatcc 26585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 5914976 - 5914888
Alignment:
Q  344 gtcacaga-actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||||| |||||||||||  | |||||||| ||||||||||| ||||||||||||||||  |||||||| ||||| ||||    
T  5914976 gtcacagagactaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaa 5914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 7073834 - 7073894
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaa-tcaatatccccaaattgaatctcaaatcc 425  Q
    |||||| ||||||||||||||||||| |||| ||||||| || ||||||||||||||||||    
T  7073834 aaaatgatcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaatcc 7073894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 12004905 - 12004853
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||| ||||||||| |||||||||||||||||||||  |||||||||    
T  12004905 tttggtcccttaaccgaaaaccaatatccccaaattgaatcttcaatccctaa 12004853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 33161979 - 33162031
Alignment:
Q  373 tcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    ||||||| ||||||||||| |||||| |||||||||||| |||||||||||||    
T  33161979 tcactttagtccctgaaccaaaaatcgatatccccaaatcgaatctcaaatcc 33162031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 422
Target Start/End: Original strand, 11985860 - 11985930
Alignment:
Q  354 taaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaa 422  Q
    |||||||||||||  |||  ||||||||| |||||||||||||||| |||||  |||||||||||||||||    
T  11985860 taaagtgaaagtagaaaaaagtcactttgatccctgaaccgaaaattaatatttccaaattgaatctcaaa 11985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 2911444 - 2911363
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||| ||||||||||||  |||| |||||||||||| || |||| |||||||||||  ||||||||||| |||||| |||||    
T  2911444 gaaccaaagtgaaagtagaaaattgtcactttggtctcttaaccaaaaatcaatatttccaaattgaatatcaaattcctaa 2911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 39256940 - 39256875
Alignment:
Q  366 aaaatggtcactttggtcc--ctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||| |  ||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  39256940 aaaatggtcactttggttctcctgaaccaaaaattaatattccccaattgaatctcaaatccctaa 39256875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 18676758 - 18676698
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    ||||||| |||||||  ||||||||||||||||||||||||  |||||||||||| |||||    
T  18676758 actaaagcgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaatatctccaaa 18676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 31091479 - 31091403
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||  |||||| ||||||||||| || | ||||||| |||||| |||||    
T  31091479 aaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaa 31091403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 12003782 - 12003834
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||| || ||||||||| ||||||||||||||||||| ||||||| ||||    
T  12003782 tttggtctctcaaccgaaaaccaatatccccaaattgaatatcaaatctctaa 12003834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 12396173 - 12396248
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||| ||||||||  |||| |||||||| ||| || |||| ||||||||||||||||| | |||||||||||||    
T  12396173 actaaaatgaaagtagaaaatagtcactttagtcactaaaccaaaaatcaatatccccaattagaatctcaaatcc 12396248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 17466763 - 17466685
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||  |||||| |||| ||||| |||| ||||| |||||||| ||||| ||| ||||||||||||    
T  17466763 actaaagtgaaagtaaaaaatggtcaatttgatccct-aaccaaaaattaatatccctaaattaaatttcaaatccctaa 17466685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 12011410 - 12011347
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||| ||||||| ||||| | |||||||||||||| | ||| |||||| |||||||||    
T  12011410 aaaatggtcattttggtcactgaatcaaaaatcaatatccctagattaaatctccaatccctaa 12011347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 2910179 - 2910245
Alignment:
Q  256 tctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    |||||||||| |||||| |||| |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  2910179 tctgactctgcacttcctttgtcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 2910245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 9615646 - 9615575
Alignment:
Q  354 taaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    ||||||||||||||||  ||||||| || |||||| |||| |||||||||||| | ||||| |||||||||||    
T  9615646 taaagtgaaagtaaaaaatggtcaccttcgtccctaaacc-aaaatcaatatcactaaattcaatctcaaatc 9615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 14886645 - 14886705
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    |||||| ||||||||  |||| ||| ||||||||| ||||| |||||||||||||||||||    
T  14886645 actaaaatgaaagtacaaaattgtcgctttggtccttgaacagaaaatcaatatccccaaa 14886705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 33161849 - 33161906
Alignment:
Q  259 gactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgat 316  Q
    |||| |||||||||||| | |||||||||| ||  |||||| ||||||||||||||||    
T  33161849 gactatgtacttccgttatcactttagtccttgacgttaaataattttgttaagtgat 33161906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 34037608 - 34037544
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattga 414  Q
    |||||||||| ||||  |||| ||||||||| | |||||||| ||||||||||||| ||||||||    
T  34037608 actaaagtgacagtagaaaatagtcactttgattcctgaaccaaaaatcaatatcctcaaattga 34037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 39999134 - 39999194
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||| ||||||||| |||||||||  |||||||||||||   |||||||| ||||||||||||    
T  39999134 aaaattgtcactttgatccctgaacaaaaaatcaatatcc---aattgaatatcaaatccctaa 39999194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 8420858 - 8420806
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||| ||  |||||||||||| || |||||||||||||||| |||||    
T  8420858 tttggtccctaaattgaaaatcaatattccgaaattgaatctcaaattcctaa 8420806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 18675459 - 18675495
Alignment:
Q  455 ttcctgactgtacatacttactatcaattaggtccct 491  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  18675459 ttcctgactgtgcatacttactatcagttaggtccct 18675495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 31090492 - 31090528
Alignment:
Q  455 ttcctgactgtacatacttactatcaattaggtccct 491  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  31090492 ttcctgactgtgcatacttactatcatttaggtccct 31090528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 37607290 - 37607345
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||| |||  |||| |||||||||||| ||||||| |||||||||||||    
T  37607290 actaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatcc 37607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 377 - 506
Target Start/End: Original strand, 3671246 - 3671375
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaacggtaaacacgaattttcactaagattcctgactgtacatacttact 476  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||| |||||||||  ||| | | ||| | ||||||||    
T  3671246 tttggtccctgaaccgaaaatcaatatccccaaattgaatctaaaacctctaacagtaaacacgaaatttcactaaagttcttaattgtgcttacttact 3671345  T
Q  477 atcaattaggtccctaattgcacatactta 506  Q
    |||| ||||||| |||||||  ||||||||    
T  3671346 atcagttaggtctctaattgtgcatactta 3671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 55388230 - 55388306
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  55388230 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 55388306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 48808543 - 48808619
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  48808543 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaatccctaa 48808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 55389421 - 55389345
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  55389421 aaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatattcccaaattgaatatcaaattcctaa 55389345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 452
Target Start/End: Complemental strand, 3694075 - 3693973
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaacggtaaacacgaattttcac 449  Q
    |||||||||||||||  |||||||||||||| ||||||||   ||||| ||| ||| |||||||||||||||||||||||| |||||||| || ||||||    
T  3694075 actaaagtgaaagtacaaaatggtcactttgatccctgaataaaaaattaatctcctcaaattgaatctcaaatccctaaccgtaaacacaaaatttcac 3693976  T
Q  450 taa 452  Q
    |||    
T  3693975 taa 3693973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 47118026 - 47117948
Alignment:
Q  352 actaaagtgaaagta-aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  47118026 actaaagtgaaaatagaaatggtcactttagtccctgaaccaaaaatcaatatccccaacttgaatctcgaatccctaa 47117948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 36279123 - 36279199
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||    
T  36279123 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaatatcaaatccctaa 36279199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 52318269 - 52318193
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||||    
T  52318269 aaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaattgaatatcaaatccctaa 52318193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 33837347 - 33837406
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  33837347 aaaatggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaatcc 33837406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Complemental strand, 47075335 - 47075247
Alignment:
Q  344 gtcacaga-actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||||||| ||||||  |||| |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  47075335 gtcacagatactaaagttaaagtagaaaattgtcactttagtccctgaaccaaaaatcaatatccccaacttgaatcttaaatccctaa 47075247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 20464257 - 20464336
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||  |||||||||||||||||| |||| | ||||||||||||||||| ||||| |||||||||||||    
T  20464257 actaaaatgaaagtagaaaatggtcactttggtccatgaatcaaaaatcaatatccccaatttgaacctcaaatccctaa 20464336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 48574411 - 48574335
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||| |||| |||||| ||| |||||||||||||||||||| ||||||| ||||    
T  48574411 aaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaa 48574335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 53957844 - 53957920
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||| | ||||| |||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  53957844 aaagtgaaagtagaaaatgattactttagtccatgaaccaaaaatcaatatccccaaattgaatgtcaaatccctaa 53957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 53959052 - 53958976
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| |||||||||| ||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  53959052 aaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 53958976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 19114681 - 19114759
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||||||||  |||||||| | ||||||||||| ||||| |||||||||||||||||||    
T  19114681 actaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatat-cccaacttgaatctcaaatccctaa 19114759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 36827383 - 36827331
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  36827383 tttggtccctgaatcgaaaatcaatatccccaaattgaatttcaaattcctaa 36827331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 47428538 - 47428459
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||||||||||||| ||||||||||| ||||| ||||| |  || |||||||||||||||||||    
T  47428538 actaaagtgaaagtaggaaatggtcactttagtccctgaaccaaaaattaatattcataacttgaatctcaaatccctaa 47428459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 48809610 - 48809531
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||||||||| ||| |||||| ||||||||||| || ||||||||| |||||| |||||    
T  48809610 actaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattcctaaattgaatatcaaattcctaa 48809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 36280256 - 36280193
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||||||||| |||||| |||||    
T  36280256 aaaatggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 36280193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 427
Target Start/End: Original strand, 33427899 - 33427976
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccct 427  Q
    |||||||||||||||  ||||  ||||||| | ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  33427899 actaaagtgaaagtagaaaattatcactttagcccctgaaccaaaaatcaatatccccaacttgaatcttaaatccct 33427976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 17700690 - 17700766
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||||  || ||||||||| |||||| |||||    
T  17700690 aaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaataatccaaaattgaatatcaaattcctaa 17700766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 373 - 426
Target Start/End: Complemental strand, 17701861 - 17701808
Alignment:
Q  373 tcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccc 426  Q
    ||||||||||||||||| | ||||||||||| |||||||||||| |||||||||    
T  17701861 tcactttggtccctgaagcaaaaatcaatattcccaaattgaatatcaaatccc 17701808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 45600911 - 45600835
Alignment:
Q  355 aaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||| || ||| |||| |||||| ||||||||||||||||| |||||| ||||||||||||    
T  45600911 aaagtgaaagtaaaaaatggccagtttagtccttgaaccaaaaatcaatatccccaacttgaatttcaaatccctaa 45600835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 48573156 - 48573232
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||| ||| |||||| ||||||||||| || ||||||||| |||||| |||||    
T  48573156 aaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaa 48573232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 33837607 - 33837544
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| | ||||||| || |||||||||| |||||||| ||||||||||| ||||||||||    
T  33837607 aaaatggttaatttggtctctaaaccgaaaattaatatccctaaattgaatcttaaatccctaa 33837544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 425
Target Start/End: Original strand, 40317954 - 40318013
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    ||||| |||||||||||||||||| | ||||||||||| || ||||| ||||||||||||    
T  40317954 aaaatagtcactttggtccctgaatcaaaaatcaatattccaaaattaaatctcaaatcc 40318013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 2591793 - 2591873
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattg-aatctcaaatccctaa 429  Q
    ||||||||||||||||||  | | |||||||||||||||| | |||||||||||| | |||||| |||||||||| |||||    
T  2591793 actaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctcgaaattgaaatctcaaattcctaa 2591873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 33428410 - 33428331
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||||||  |||||||||| |||||| |||  |||||||||||| | || ||||||||||| |||||||    
T  33428410 actaaaatgaaagtaaaaaatggtcactttagtccctcaacaaaaaatcaatatctcaaacttgaatctcaattccctaa 33428331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 40206071 - 40206118
Alignment:
Q  353 ctaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatc 398  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||    
T  40206071 ctaaagtgaaagtataaaatggtcactttggtccttgaaccgaaaatc 40206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 45599052 - 45599131
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||  ||||||||||||| || |||||||| ||||||||||| |  || ||||| |||||||||||||    
T  45599052 actaaaatgaaagtagaaaatggtcactttagttcctgaaccaaaaatcaatattcttaacttgaaactcaaatccctaa 45599131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 491
Target Start/End: Original strand, 17700855 - 17700889
Alignment:
Q  457 cctgactgtacatacttactatcaattaggtccct 491  Q
    |||||||||||||||||||||||| ||||||||||    
T  17700855 cctgactgtacatacttactatcagttaggtccct 17700889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 36280361 - 36280295
Alignment:
Q  256 tctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    |||||||||| ||||||||| | |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  36280361 tctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatatgttaagtgatgatgtg 36280295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 47428019 - 47428081
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    |||||||||||||| ||| ||||| | |||||||||||   ||| ||||||||||||||||||    
T  47428019 aaaatggtcactttagtctctgaatcaaaaatcaatatgttcaacttgaatctcaaatcccta 47428081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 29188310 - 29188273
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatat 403  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  29188310 aaaattgtcactttgatccctgaaccgaaaatcaatat 29188273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 55388153 - 55388218
Alignment:
Q  257 ctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    ||||||||| ||| ||||| | |||||||||| ||  ||||||||| ||||||||||||| |||||    
T  55388153 ctgactctgcactcccgttatcactttagtccctgacgttaaaaaaatttgttaagtgatgatgtg 55388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 2323219 - 2323271
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||| ||||||| |||||||  |||||||||| |||||||||||    
T  2323219 tttggtccttgaatcgaaaattaatatccttaaattgaatcacaaatccctaa 2323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 36827508 - 36827452
Alignment:
Q  267 acttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtga 323  Q
    ||||||||| | |||||||||  || ||||||| |||||||||||||||| ||||||    
T  36827508 acttccgttatcactttagtctctgatgttaaataattttgttaagtgatgatgtga 36827452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 48808449 - 48808505
Alignment:
Q  260 actctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgat 316  Q
    |||||| ||||||||||| ||||||||||  | |||||||||| | |||||||||||    
T  48808449 actctgcacttccgttgtcactttagtcccggatgttaaaaaaatatgttaagtgat 48808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 48808697 - 48808733
Alignment:
Q  455 ttcctgactgtacatacttactatcaattaggtccct 491  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  48808697 ttcctgactgtgcatacttactatcagttaggtccct 48808733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 49261497 - 49261453
Alignment:
Q  365 taaaatggtcactttggtccctgaaccgaaaatcaatatccccaa 409  Q
    |||||||||||||||  |||||||| | |||||||||||||||||    
T  49261497 taaaatggtcactttaatccctgaatcaaaaatcaatatccccaa 49261453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 53959142 - 53959078
Alignment:
Q  258 tgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    |||||||| ||||||||| | |||||||||  ||  ||||||||| ||||||||||||| |||||    
T  53959142 tgactctgcacttccgttatcactttagtctctgacgttaaaaaaatttgttaagtgatgatgtg 53959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 491
Target Start/End: Original strand, 55388396 - 55388432
Alignment:
Q  455 ttcctgactgtacatacttactatcaattaggtccct 491  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  55388396 ttcctgactgtgcatacttactatcagttaggtccct 55388432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 2464840 - 2464916
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  2464840 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 2464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 9537210 - 9537289
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  9537210 actaaagtgaaagtagaaaatagtcactttgatccctgaatcaaaaatcaatatccccaaattgaatctcaaatccctaa 9537289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 426
Target Start/End: Original strand, 8074621 - 8074694
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccc 426  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  8074621 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccc 8074694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 578707 - 578637
Alignment:
Q  352 actaaagtgaaagtaaa--atggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctca 420  Q
    |||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  578707 actaaaatgaaagtaaagaatgatcactttggtccctgaaccgaaaatcaatatccctaaattgaatctca 578637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 344 - 429
Target Start/End: Original strand, 18004817 - 18004905
Alignment:
Q  344 gtcacaga-actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||||| ||||||||  |||| |||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||    
T  18004817 gtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaa 18004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 25590601 - 25590677
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||| |||||    
T  25590601 aaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 25590677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 40611431 - 40611507
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  40611431 aaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 40611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 40612611 - 40612535
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||| ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||    
T  40612611 aaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaa 40612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 8075785 - 8075710
Alignment:
Q  355 aaagtgaaagt--aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||    
T  8075785 aaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattccta 8075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 34173448 - 34173527
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||  ||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||    
T  34173448 actaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaa 34173527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 4593031 - 4593093
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaa 415  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4593031 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaa 4593093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 421
Target Start/End: Original strand, 14889953 - 14890008
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaa 421  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  14889953 aaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaa 14890008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 28589883 - 28589946
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||    
T  28589883 aaaatggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaa 28589946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 545988 - 545912
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| ||||||||||||| |||||| ||||||||||| ||||||||||||  |||||||||||    
T  545988 aaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatatgcccaaattgaataacaaatccctaa 545912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 32640459 - 32640535
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||| |||||| ||||||||||| || ||||||||| |||||| |||||    
T  32640459 aaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattccaaaattgaatatcaaattcctaa 32640535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 13651096 - 13651041
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  13651096 actaaagtgaaagtaaaaaatggtcactttagtccctgaaccgaaaatcaatatcc 13651041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 28591065 - 28590994
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaacc-gaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||  |||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||    
T  28591065 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaatcaatattcccaaattgaatatcaaat 28590994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 31946988 - 31946933
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  31946988 actaaagtgaaagtaaaaaatggtcactttggtccctgaatcgaaaatcaatatcc 31946933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 2314449 - 2314390
Alignment:
Q  370 tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||| |||||| |||||    
T  2314449 tggtcactttggtccctgaaccaaaatttaatatccccaaattgaatatcaaattcctaa 2314390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 14891086 - 14891023
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||| ||||||||| | ||||||||||| |||||||||||| |||||| |||||    
T  14891086 aaaatggtcactttagtccctgaatcaaaaatcaatattcccaaattgaatttcaaattcctaa 14891023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 32641666 - 32641603
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||||| ||||| |||| |||||||||||||||||||||||| | ||||||||||    
T  32641666 aaaatggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaa 32641603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 429
Target Start/End: Original strand, 21069479 - 21069555
Alignment:
Q  354 taaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||  ||||||||| |||| ||||||||| |||||||||||| | ||| |||||||||||||||||||    
T  21069479 taaagtgaaagtagaaaatggtca-tttgatccctgaactgaaaatcaatattctcaacttgaatctcaaatccctaa 21069555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 19271530 - 19271606
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaat-caatatccccaaattgaatctcaaatcc 425  Q
    |||||||||||||||  |||| |||||||| |||||||||| |||||| ||||||||||||||| ||| ||||||||    
T  19271530 actaaagtgaaagtagaaaattgtcactttagtccctgaactgaaaattcaatatccccaaattaaatatcaaatcc 19271606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 16979196 - 16979252
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaa 422  Q
    ||||||||||||||||| |||||| | ||||||||||||| |||| |||||||||||    
T  16979196 aaaatggtcactttggttcctgaatcaaaaatcaatatcctcaaactgaatctcaaa 16979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 2466725 - 2466655
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||  |||| |||| ||||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  2466725 aaagtgaaagtagaaaatagtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaat 2466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 16611876 - 16611954
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    ||||||||||| |||  ||||| |||||||  |||||||||| ||||||||||||||||  || |||||||||||||||    
T  16611876 actaaagtgaatgtagaaaatgatcactttaatccctgaaccaaaaatcaatatccccaccttaaatctcaaatcccta 16611954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 19271733 - 19271659
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||||||||||  ||||| ||| |||| ||||| ||||||||||||||||| |||| |||||| |||||||    
T  19271733 actaaagtgaaagtagaaaatgatcattttgatccctaaaccgaaaatcaatatctccaagttgaatttcaaatc 19271659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 544819 - 544895
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| |||| || ||| |||||||| ||||||||||| |||||||||||| |||||| |||||    
T  544819 aaagtgaaagtagaaaatagtcatttgggttcctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 544895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 546078 - 546020
Alignment:
Q  258 tgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgat 316  Q
    |||||||| ||||||||| | |||||||||| ||  ||||||||| |||||||||||||    
T  546078 tgactctgcacttccgttatcactttagtccctgacgttaaaaaaatttgttaagtgat 546020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 4592941 - 4593006
Alignment:
Q  257 ctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    ||||||||| ||||||||| | |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  4592941 ctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 4593006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 4594053 - 4593977
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||   | |||| |||||| ||||||||||| |||||||||||| |||||| |||||    
T  4594053 aaagtgaaagtagaaaatggtcatcgtagtccatgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 4593977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 18004719 - 18004788
Alignment:
Q  258 tgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtgatata 327  Q
    |||||||| ||||||||| | |||||||||  || ||||||| | || ||||||||||||||| ||||||    
T  18004719 tgactctgcacttccgttatcactttagtctctgatgttaaatagttatgttaagtgataatgcgatata 18004788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 37072762 - 37072799
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatat 403  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  37072762 aaaatagtcactttagtccctgaaccgaaaatcaatat 37072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 490
Target Start/End: Original strand, 40611596 - 40611629
Alignment:
Q  457 cctgactgtacatacttactatcaattaggtccc 490  Q
    |||||||||||||||||||||||| |||||||||    
T  40611596 cctgactgtacatacttactatcagttaggtccc 40611629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 493
Target Start/End: Original strand, 544983 - 545019
Alignment:
Q  457 cctgactgtacatacttactatcaattaggtccctaa 493  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  544983 cctgactgtgcatacttactatcagttaggtccctaa 545019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 9537984 - 9537945
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaa 389  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  9537984 actaaagtgaaagtataaaatggtcactttggtccctgaa 9537945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 19183129 - 19183184
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||||||||||  |||| |||||| || ||||| |||||||||||||||    
T  19183129 actaaagtgaaagtaaaaaatggtgactttgctctctgaatcgaaaatcaatatcc 19183184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 7e-23; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 42278233 - 42278296
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  42278233 aaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 42278296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 38216634 - 38216711
Alignment:
Q  352 actaaagtgaaagtaaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||| ||||||||| ||||||||||||    
T  38216634 actaaagtgaaagtaaaatggtccctttggttcctgaatcgataatcaatatcccaaaattgaatatcaaatccctaa 38216711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 4703152 - 4703078
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||||||||||  |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  4703152 actaaagtgaaagtataaaattgtcactttggtccctgacccaaaaatcaatatccccaaattgaatctcaaatc 4703078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 47874734 - 47874810
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||||    
T  47874734 aaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatcccaaaattgaatatcaaatccctaa 47874810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 19050424 - 19050503
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||||| |||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  19050424 actaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaa 19050503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 20599841 - 20599762
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||    
T  20599841 actaaaatgaaagtaaaaaatggtcactttggtccctgaaccaaaaattaatattcccaaattgaatctcaaattcctaa 20599762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 47878436 - 47878360
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| || ||||||||| |||||| |||||    
T  47878436 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaa 47878360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 4701951 - 4702030
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||| |||||||||||||||||| | ||| |||||||||  ||||||||||||||||| ||||    
T  4701951 actaaagtgaaagtagaaaatagtcactttggtccctgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaa 4702030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 53771021 - 53770946
Alignment:
Q  356 aagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||  |||| |||||||| ||| | ||||| ||||||||||||||||| |||||||||||||||||||    
T  53771021 aagtgaaagtagaaaattgtcactttagtctccgaaccaaaaatcaatatccccaacttgaatctcaaatccctaa 53770946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 26170723 - 26170786
Alignment:
Q  260 actctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtga 323  Q
    |||||| |||||| || | ||||||||||||| |||||||||||||||||||||||| ||||||    
T  26170723 actctgcacttccattatcactttagtccatgctgttaaaaaattttgttaagtgatgatgtga 26170786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 375 - 429
Target Start/End: Original strand, 26170856 - 26170910
Alignment:
Q  375 actttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||||||||||||||||| |||||||||||| | ||||||||||    
T  26170856 actttgatccctgaaccgaaaatcaatattcccaaattgaatttgaaatccctaa 26170910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 411
Target Start/End: Original strand, 6039325 - 6039370
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaat 411  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  6039325 aaaatggtcactttgctccctgaaccgaaaattaatatccccaaat 6039370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 42391841 - 42391762
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||||||||||||| ||||||||||  |||||  |||||  |||||||| ||||||||||||||    
T  42391841 actaaagtgaaagtagaaaatggtcactttagtccctgaactaaaaattcatatcttcaaattgagtctcaaatccctaa 42391762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 2786427 - 2786465
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatc 404  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2786427 aaaatggtcactttggtctctgaaccgaaaatcaatatc 2786465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 26172986 - 26172918
Alignment:
Q  256 tctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgtt--aagtgataatgtg 322  Q
    |||||||||| ||||||||| | |||||||||||||  ||||||||||| ||||  |||||||||||||    
T  26172986 tctgactctgcacttccgttatcactttagtccatgccgttaaaaaattatgttaaaagtgataatgtg 26172918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 32244453 - 32244517
Alignment:
Q  344 gtcacaga-actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    |||||||| ||||||||||||||||||  ||||||||||| || ||| |||||||||||||||||    
T  32244453 gtcacagagactaaagtgaaagtaaaaaatggtcactttgatctctgcaccgaaaatcaatatcc 32244517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 44158706 - 44158753
Alignment:
Q  363 agtaaaatggtcactttggtccctgaaccgaaaatcaatatccccaaat 411  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  44158706 agtaaaatggtcactttagtcc-tgaaccaaaaatcaatatccccaaat 44158753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 53770497 - 53770560
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||| ||| || || |  |||||||||||||||| |||||| ||||||||||||    
T  53770497 aaaatggtcactttagtcactaaagcagaaatcaatatccccaacttgaatatcaaatccctaa 53770560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 21622011 - 21622068
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatcccc 407  Q
    |||||||||||||||  |||||||||||||| | |||||||| |||| ||||||||||    
T  21622011 actaaagtgaaagtataaaatggtcactttgattcctgaaccaaaaaccaatatcccc 21622068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 56041182 - 56041227
Alignment:
Q  384 cctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||  ||||||||||||| |||||||||| ||||||||||||    
T  56041182 cctgaactaaaaatcaatatccacaaattgaatttcaaatccctaa 56041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 39870587 - 39870535
Alignment:
Q  372 gtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||| ||||| ||||| |||||||| ||| ||||||||||| |||||||    
T  39870587 gtcactttcgtccccgaaccaaaaatcaaaatctccaaattgaatttcaaatc 39870535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 48739995 - 48739944
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaat 401  Q
    ||||||||||||||||||  | |||||||| ||||||||||| |||||||||    
T  48739995 actaaagtgaaagtaaaaaatagtcactttagtccctgaaccaaaaatcaat 48739944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 7509408 - 7509328
Alignment:
Q  352 actaaagtgaaagta---aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||   |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  7509408 actaaagtgaaagtagaaaaatagtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaa 7509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 12223636 - 12223555
Alignment:
Q  350 gaactaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||||  | ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  12223636 gaactaaagtgaaagtaaaaaattgtcactttgatccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaa 12223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 24934963 - 24935044
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||  |||||||||||||| ||||| |||||||||||||||| || ||||||||||||||||||||||    
T  24934963 gaactaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaa 24935044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 43461674 - 43461593
Alignment:
Q  350 gaactaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||    
T  43461674 gaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaaaaatcaatatccctcaattgaatctcaaatccctaa 43461593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 33607449 - 33607370
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||  ||||||||||||||| || ||| |||||||||||||||||||||||||| ||||||||||    
T  33607449 actaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaatccctaa 33607370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 7259624 - 7259561
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  7259624 aaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccctaa 7259561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 7258446 - 7258522
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  7258446 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 7258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 425
Target Start/End: Original strand, 43457627 - 43457710
Alignment:
Q  344 gtcacaga-actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  43457627 gtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctga-ccaaaaatcaatatccctaaattgaatctcaaatcc 43457710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 44334402 - 44334326
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  44334402 aaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 44334326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 8048719 - 8048653
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaat 416  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  8048719 actaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaattaatatccacaaattgaat 8048653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 44333321 - 44333384
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  44333321 aaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 44333384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 30924961 - 30924885
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||| ||  |||||| |||||||||||||||||||||||| ||||||||||||    
T  30924961 aaagtgaaagtagaaaatggtcactttgatctatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 30924885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 35729038 - 35728962
Alignment:
Q  355 aaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||    
T  35729038 aaagtgaaagtagaaagtggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatattaaatccctaa 35728962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 42478222 - 42478146
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||| |||||  ||||||||||||||| |||||||| ||||||||||||    
T  42478222 aaagtgaaagtagaaaatggtcactttggtccatgaacaaaaaatcaatatcccctaattgaatatcaaatccctaa 42478146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 48788624 - 48788548
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||| |||||    
T  48788624 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaa 48788548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 428
Target Start/End: Complemental strand, 48647395 - 48647320
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    ||||||||||||  ||||||||||||| ||||||||||| ||||||||||| ||||||||||||  ||||||||||    
T  48647395 aaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatcccta 48647320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 2677104 - 2677182
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    |||||||||||||||  ||||| |||||||| |||||||||  |||||||||||||| ||||| |||||||||||||||    
T  2677104 actaaagtgaaagtagaaaatgatcactttgttccctgaactaaaaatcaatatccctaaattaaatctcaaatcccta 2677182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 10899012 - 10898949
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| |||||    
T  10899012 aaaatggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaa 10898949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 45584435 - 45584373
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  45584435 aaaatggtcactttggtccctgaacc-aaaatcaatattcccaaattgaatatcaaattcctaa 45584373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 10894514 - 10894589
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||| ||||||| ||| ||||||| |||||||||||||||| ||||||||||||    
T  10894514 aaagtgaaagtagaaaatggtcactttagtccctggaccaaaaatca-tatccccaaattgaatatcaaatccctaa 10894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 45583792 - 45583841
Alignment:
Q  380 ggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  45583792 ggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 45583841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 5930064 - 5929985
Alignment:
Q  352 actaaagtgaaagt--aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||  |||||| |||||||| |||||| | | ||||||||||| |||||||||||||||||||| ||||    
T  5930064 actaaagtgaaagttaaaaatgatcactttgatccctggatcaaaaatcaatattcccaaattgaatctcaaatctctaa 5929985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 12221486 - 12221542
Alignment:
Q  367 aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||    
T  12221486 aaatggtcaatttggtccctgaaccaaagatcaatatccccaaattgaatatcaaat 12221542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 426
Target Start/End: Complemental strand, 19433854 - 19433794
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccc 426  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||    
T  19433854 aaaatggtcattttggttcctgaactaaaaatcaatatccccaaattgaatctctaatccc 19433794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 385568 - 385510
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  385568 aaaatggtcactttagtccctgaaccgaaagtcaatat-cccaagttgaatctcaaatcc 385510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 39708313 - 39708376
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||| |||| |||| ||||||||||| | |||||||||| ||||||||||||    
T  39708313 aaaatggtcactttggaccctaaaccaaaaatcaatattctcaaattgaatttcaaatccctaa 39708376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 44529194 - 44529271
Alignment:
Q  352 actaaagtgaaagt-aaaatggtcactttggtccctgaacc----gaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||||||||||| |||||||||||||||  |||||||||     ||||||||||||| ||||||||||||||||||    
T  44529194 actaaagtgaaagtaaaaatggtcactttgacccctgaaccaattaaaaatcaatatcctcaaattgaatctcaaatc 44529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 48777441 - 48777504
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatcccc-aaattgaatctcaaatccctaa 429  Q
    ||||||||||||||| | |||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  48777441 aaaatggtcactttgattcctgaacc-aaaatcaatatccccaaaattgaatttcaaatccctaa 48777504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 6680468 - 6680402
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaat 416  Q
    |||||||||||||||  |||| |||| ||| |||||| |||| ||||||||||||||||||||||||    
T  6680468 actaaagtgaaagtagaaaatagtcattttagtccctaaaccaaaaatcaatatccccaaattgaat 6680402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 8375567 - 8375497
Alignment:
Q  344 gtcacaga-actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaat 411  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||| |||| |||||||||||||| ||||    
T  8375567 gtcacagagactaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatatccctaaat 8375497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 46286707 - 46286770
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||| ||||||||| ||| |||||| ||||||||||| |||||||| ||| ||||||||||||    
T  46286707 aaaatagtcactttgatccttgaaccaaaaatcaatattcccaaattaaatttcaaatccctaa 46286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 32793359 - 32793432
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||||||||  || ||| ||||||||||||| | ||||| |||||||| ||| ||||||||||||    
T  32793359 actaaagtgaaagtaaaaaatgatcattttggtccctgaatcaaaaatgaatatccctaaaatgaatctcaaat 32793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 44530568 - 44530511
Alignment:
Q  356 aagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaat 411  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||| |||||||||||||    
T  44530568 aagtgaaagtaaaaactggtcactttagtccctgaaccaaaaattaatatccccaaat 44530511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 35727882 - 35727939
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    ||||||||||||||| ||| | |||| ||||||||||| |||||||||||| ||||||    
T  35727882 aaaatggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaat 35727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 42477551 - 42477627
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||| ||||||||||||||||||| ||||  ||||| |||| ||||||| |||||| |||||    
T  42477551 aaagtgaaagtagaaaatgatcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaa 42477627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 24935647 - 24935569
Alignment:
Q  352 actaaagtgaaagtaaaatg--gtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||    ||||||||| |||||||||  ||||||| |||| |||||||||||||||||| |||||    
T  24935647 actaaagtgaaagtaaaaaaatgtcactttgatccctgaactaaaaatca-tatcaccaaattgaatctcaaattcctaa 24935569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 423
Target Start/End: Original strand, 385007 - 385079
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    |||||||||||||||  |||| ||||||||| ||  |||| ||||||||||||| |||||||| ||||||||||    
T  385007 actaaagtgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaatat-cccaaattaaatctcaaat 385079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 10899117 - 10899051
Alignment:
Q  256 tctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    |||||||||| ||||||||| | |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  10899117 tctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 10899051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 12223742 - 12223676
Alignment:
Q  257 ctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtga 323  Q
    ||||||||| | ||||||| |||||||||||  || ||||||| |||| ||||||||||| ||||||    
T  12223742 ctgactctgcagttccgttattactttagtcactgatgttaaataattctgttaagtgatgatgtga 12223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 39824317 - 39824389
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||||||||  ||||||||||||| | |||||||    |||||||||| |||||||||||| ||||||||    
T  39824317 actaaagtgaaagtagaaaatggtcactttagcccctgaat---aaatcaatattcccaaattgaatttcaaatcc 39824389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 24287668 - 24287724
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccc 406  Q
    |||||||||||||||  |||||||| |||| ||||||||||| ||||| ||||||||    
T  24287668 actaaagtgaaagtagaaaatggtcgctttagtccctgaaccaaaaatgaatatccc 24287724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 8047003 - 8047082
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||  |||| ||||||||| ||| |||||  | ||| |||||||||||||||||| | ||||||||||    
T  8047003 actaaattgaaagtagaaaatagtcactttgatccttgaacaaacaattaatatccccaaattgaattttaaatccctaa 8047082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 34710347 - 34710272
Alignment:
Q  344 gtcacaga-actaaagtgaaagt--aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaat 416  Q
    |||||||| ||||||||||||||  ||||| || |||||| |||||||| | |||||||| |||| ||||||||||    
T  34710347 gtcacagagactaaagtgaaagtaaaaaattgttactttgatccctgaatcaaaaatcaacatcctcaaattgaat 34710272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 39708193 - 39708249
Alignment:
Q  267 acttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtga 323  Q
    ||||||||| | |||||||||| || ||||||| |||| ||||| ||||||||||||    
T  39708193 acttccgttatcactttagtccgtgatgttaaataattatgttatgtgataatgtga 39708249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 45584538 - 45584474
Alignment:
Q  258 tgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    |||||||| ||||||||| | |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  45584538 tgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 45584474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 46287336 - 46287263
Alignment:
Q  355 aaagtgaaagta-aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| |||| |||||||| |||||| || | ||||||||||| || ||||||||  ||||||||||||    
T  46287336 aaagtgaaagtagaaatagtcactttagtccctaaatcaaaaatcaatattcctaaattgaa--tcaaatccctaa 46287263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 25038067 - 25038148
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||  ||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25038067 gaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaa 25038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 25043279 - 25043360
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||  ||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25043279 gaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatccctaa 25043360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 9339817 - 9339893
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  9339817 aaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 9339893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 16249832 - 16249910
Alignment:
Q  353 ctaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16249832 ctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaa 16249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 32665722 - 32665645
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaac-cgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  32665722 aaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaattgaatatcaaatccctaa 32665645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 6613922 - 6613843
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||||  | |||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6613922 actaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaa 6613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 6612614 - 6612677
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  6612614 aaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaa 6612677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 26518293 - 26518356
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||    
T  26518293 aaaatggtcactttggtctctgaaccgaaaaccaatatctccaaattgaatctcaaattcctaa 26518356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 34088404 - 34088325
Alignment:
Q  352 actaaagtgaaagta-aaatg-gtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||| ||||| |||||||||||||||||||  ||| |||||||||||||||||||| ||||||||||||    
T  34088404 actaaagtgaaagtagaaatgtgtcactttggtccctgaacaaaaattcaatatccccaaattgaatttcaaatccctaa 34088325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 7944326 - 7944402
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||  ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  7944326 aaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaattgaatatcaaatccctaa 7944402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 9340977 - 9340901
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||| ||||||| |||||| ||||| |||||| |||||    
T  9340977 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaa 9340901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 52439632 - 52439708
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||| |||||    
T  52439632 aaagtgaaagtagaaaatggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaa 52439708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 3117837 - 3117916
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  ||||| ||| ||| |||| |||||| ||||| |||||||||||||||||| ||||||||||||    
T  3117837 actaaagtgaaagtagaaaatgatcattttagtccttgaaccaaaaattaatatccccaaattgaatatcaaatccctaa 3117916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 22856866 - 22856941
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||||||||  ||||| ||||||| || |||||||| ||| ||||||||| |||||||||||||||||||    
T  22856866 actaaagtgaaagtagaaaatgatcactttagttcctgaaccaaaattcaatatcctcaaattgaatctcaaatcc 22856941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 7945506 - 7945427
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaa---ttgaatctcaaatccctaa 429  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||||||| ||||||   || ||||||||||||||||    
T  7945506 aaagtgaaagtagaaaatggtcactttggtccctaaaccaaaaatcaatattcccaaattcttaaatctcaaatccctaa 7945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 39977536 - 39977598
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcccta 428  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  39977536 aaaatgataactttggtctctgaaccaaaaatcaatatcctcaaattgaatcgcaaatcccta 39977598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 52440512 - 52440436
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  |||| |||||||||||||||||||| ||||| | ||| |||||||||||| |||||| |||||    
T  52440512 aaagtgaaagtagaaaatagtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaa 52440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 34085710 - 34085789
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||  ||||| |||||||| | | |||||| |||||||||||||||||||||||| |||||| |||||    
T  34085710 actaaaatgaaagtagaaaatgatcactttgatgcttgaaccaaaaatcaatatccccaaattgaatttcaaattcctaa 34085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 8975347 - 8975404
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatcccc 407  Q
    |||||||||||||||  |||||||||||||||||||  |||| |||||||||||||||    
T  8975347 actaaagtgaaagtagaaaatggtcactttggtcccgaaaccaaaaatcaatatcccc 8975404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 11060720 - 11060664
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccc 406  Q
    |||||||||||||||  |||| ||||||||| ||||||||| |||||||||||||||    
T  11060720 actaaagtgaaagtagaaaattgtcactttgatccctgaacagaaaatcaatatccc 11060664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 44720782 - 44720722
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    |||||||||||||||  |||| ||||||||||| | ||||||||||||||||||| |||||    
T  44720782 actaaagtgaaagtagaaaattgtcactttggttcttgaaccgaaaatcaatatctccaaa 44720722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 51453652 - 51453595
Alignment:
Q  372 gtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||| |||||||| |  |||||||||||| |||||||||| ||||||||||||    
T  51453652 gtcactttgatccctgaatcataaatcaatatccgcaaattgaatttcaaatccctaa 51453595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 423
Target Start/End: Original strand, 11830079 - 11830150
Alignment:
Q  354 taaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    |||||||||||||  ||||||||| |||| |||  ||||| |||||||||||||  ||||||||||||||||    
T  11830079 taaagtgaaagtagaaaatggtcattttgatcctagaaccaaaaatcaatatcctaaaattgaatctcaaat 11830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 22857479 - 22857439
Alignment:
Q  385 ctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  22857479 ctgaaccaaaaatcaatatacccaaattgaatctcaaatcc 22857439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 23703898 - 23703934
Alignment:
Q  372 gtcactttggtccctgaaccgaaaatcaatatcccca 408  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23703898 gtcactttggtccctgaaccaaaaatcaatatcccca 23703934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 39726621 - 39726543
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||| |||| ||| | ||||||||| |||||||||||| |||||||||||  |||||||||||    
T  39726621 actaaagtgaaagtagaaaatagtcattttag-ccctgaaccaaaaatcaatatcaccaaattgaattccaaatccctaa 39726543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 44719536 - 44719594
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccc 406  Q
    |||||||| ||||||||  |||| ||||||||| ||||||||| |||||||||||||||    
T  44719536 gaactaaaatgaaagtagaaaattgtcactttgctccctgaactgaaaatcaatatccc 44719594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 51450188 - 51450262
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    |||||| ||||||||  ||||| ||||| | |||| |||||| ||||| ||||||||||| ||||||||||||||    
T  51450188 actaaactgaaagtagaaaatgatcactatagtccatgaaccaaaaataaatatccccaacttgaatctcaaatc 51450262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 1001339 - 1001400
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaat 411  Q
    |||||||||||||||  |||| || |||||| ||| ||||||||||||||||||||| ||||    
T  1001339 actaaagtgaaagtagaaaatagttactttgatccttgaaccgaaaatcaatatccctaaat 1001400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 29766111 - 29766168
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatcccc 407  Q
    |||||||||||| ||  |||| |||||||||||||||||||  |||||||||||||||    
T  29766111 actaaagtgaaaatagaaaattgtcactttggtccctgaacaaaaaatcaatatcccc 29766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 22857621 - 22857556
Alignment:
Q  258 tgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtga 323  Q
    ||||| || ||||||||| | |||||||||||||  |||||| |||| ||||||||||| ||||||    
T  22857621 tgactttgcacttccgttatcactttagtccatgacgttaaataattatgttaagtgatgatgtga 22857556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 539
Target Start/End: Complemental strand, 32665570 - 32665513
Alignment:
Q  482 ttaggtccctaattgcacatacttactatcagttagatcctcgacagtaaatatgaaa 539  Q
    |||||||||| | |||||| |||||||||||||||| |||  ||||||||| ||||||    
T  32665570 ttaggtccctgactgcacacacttactatcagttaggtccctgacagtaaacatgaaa 32665513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 50107119 - 50107078
Alignment:
Q  369 atggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    |||||||||||||||| | |||||||||| ||||||||||||    
T  50107119 atggtcactttggtcctttaaccgaaaattaatatccccaaa 50107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 1407816 - 1407871
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||| |||||||    
T  1407816 actaaagtgaaagtagaaaattatcactttggtccttgaaccgaaaattaatatcc 1407871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 5783040 - 5783004
Alignment:
Q  393 aaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||| || ||||||||||||||||    
T  5783040 aaaatcaatatccccaacttaaatctcaaatccctaa 5783004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 1952922 - 1952846
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  1952922 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccctaa 1952846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 32898397 - 32898321
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  32898397 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaa 32898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Original strand, 35177565 - 35177641
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||  ||||||| ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  35177565 aaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaa 35177641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 5737958 - 5737879
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||| |||||||||  |||||||||||||| || || | |||||||||||||||||||||||||||||||||||||    
T  5737958 actaaagtaaaagtaaaaaatggtcactttggtctctaaatcaaaaatcaatatccccaaattgaatctcaaatccctaa 5737879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 39138599 - 39138520
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||||||||| | | || ||||||||||||||||||| |||||||||||||||||||||    
T  39138599 actaaagtgaaagtagaaaatggtcactttgattcttgtaccgaaaatcaatatccccgaattgaatctcaaatccctaa 39138520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 424
Target Start/End: Original strand, 41121294 - 41121367
Alignment:
Q  353 ctaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatc 424  Q
    ||||||||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  41121294 ctaaagtgaaagtagaaaattgtcactttggtccttgaaccaaaaatcaatatccccaaattgaatttcaaatc 41121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 41122697 - 41122618
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| ||  |||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||    
T  41122697 actaaagtgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaattcctaa 41122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 45476482 - 45476419
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  45476482 aaaatggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaa 45476419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 5737030 - 5737105
Alignment:
Q  352 actaaagtgaaagta-aaatggtcactttggtccctgaaccgaaaatcaa-tatccccaaattgaatctcaaatcc 425  Q
    |||||||| |||||| ||||  |||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  5737030 actaaagtaaaagtagaaattatcactttggtccctgatccaaaaatcaaatatccccaaattgaatctcaaatcc 5737105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 28619471 - 28619408
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||  ||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  28619471 aaaatgatcactttaatccatgaaccaaaaatcaatatccccaaattgaatttcaaatccctaa 28619408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 425
Target Start/End: Original strand, 30134745 - 30134829
Alignment:
Q  344 gtcacaga-actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||| |||||||||||||||  |||| ||||||||||||| | |||| ||||||||||| | |||||||||| ||||||||    
T  30134745 gtcacagagactaaagtgaaagtagaaaattgtcactttggtcctttaaccaaaaatcaatattcacaaattgaatttcaaatcc 30134829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 35178744 - 35178687
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaat 423  Q
    |||||| ||||||||| ||||||||| ||||||||||| |||||||||||| ||||||    
T  35178744 aaaatgatcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaat 35178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 2552193 - 2552272
Alignment:
Q  344 gtcacagaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaa 421  Q
    ||||||| |||||||||||||||  |||| |||||||||||  ||||||||||||||||||| |  | ||||||||||||    
T  2552193 gtcacaggactaaagtgaaagtagaaaattgtcactttggtttctgaaccgaaaatcaatattcttagattgaatctcaa 2552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 41754156 - 41754211
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||||||||||  | |||||||||||||||||| |||||||||||||||    
T  41754156 actaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatcc 41754211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 10406390 - 10406453
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||| |||||||||||| ||||||| |||||||||||  ||||||||||| |||||| |||||    
T  10406390 aaaatagtcactttggtctctgaaccaaaaatcaatatttccaaattgaatatcaaattcctaa 10406453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 422
Target Start/End: Complemental strand, 10407536 - 10407467
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaa 422  Q
    ||||||||||||  ||||||| ||||| ||| ||||||| ||||||||||| |||||||||||| |||||    
T  10407536 aaagtgaaagtagaaaatggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaa 10407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 28524946 - 28525002
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccc 406  Q
    ||||||||||||||||||  | |||| |||||||| |||||||||||||||||||||    
T  28524946 actaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatccc 28525002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 41754739 - 41754687
Alignment:
Q  354 taaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatc 404  Q
    ||||||||||||||||  ||||||||||||||| |||| ||||||||||||||    
T  41754739 taaagtgaaagtaaaaaatggtcactttggtccatgaatcgaaaatcaatatc 41754687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 8569603 - 8569655
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  8569603 tttgatccctgaactaaaaatcaatatccacaaattgaatctcaaatctctaa 8569655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 406
Target Start/End: Complemental strand, 31075206 - 31075170
Alignment:
Q  370 tggtcactttggtccctgaaccgaaaatcaatatccc 406  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31075206 tggtcactttggtccctgaactgaaaatcaatatccc 31075170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 45476353 - 45476412
Alignment:
Q  355 aaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaatt 412  Q
    ||||||||||||  |||| |||||||||||||||||||| ||||||||||| || |||||    
T  45476353 aaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatattcctaaatt 45476412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 24199109 - 24199179
Alignment:
Q  344 gtcacaga-actaaagtgaaagtaaaa--tggtcactttggtccctgaaccg-aaaatcaatatccccaaa 410  Q
    |||||||| ||||||||||||||||||  || ||| ||||||||||||| || ||||||||||||||||||    
T  24199109 gtcacagatactaaagtgaaagtaaaaaatgatcattttggtccctgaatcgaaaaatcaatatccccaaa 24199179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 32563780 - 32563843
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||  ||| | |||| | |||||||| || |||||||||||||||||||||||    
T  32563780 aaaatggtcactttaatccttaaaccaataatcaataccctcaaattgaatctcaaatccctaa 32563843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 13144530 - 13144594
Alignment:
Q  354 taaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaat 416  Q
    |||||||||||||  |||| ||||||||| ||||| || |||||||||||||  |||||||||||    
T  13144530 taaagtgaaagtagaaaattgtcactttgatcccttaatcgaaaatcaatatttccaaattgaat 13144594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 28006531 - 28006471
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    |||||||||||| || ||  |||||||||||||| ||||||  ||||||||||||||||||    
T  28006531 actaaagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 28063834 - 28063774
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaa 410  Q
    |||||||||||| || ||  |||||||||||||| ||||||  ||||||||||||||||||    
T  28063834 actaaagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28063774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 32898488 - 32898423
Alignment:
Q  257 ctgactctgtacttccgttgttactttagtccatgttgttaaaaaattttgttaagtgataatgtg 322  Q
    ||||||||| ||||||||| | |||||||||| ||  ||||||||| | ||||||||||| |||||    
T  32898488 ctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 32898423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 491
Target Start/End: Complemental strand, 5965206 - 5965174
Alignment:
Q  459 tgactgtacatacttactatcaattaggtccct 491  Q
    ||||||| |||||||||||||||||||||||||    
T  5965206 tgactgtgcatacttactatcaattaggtccct 5965174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 5785 - 5864
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  5785 actaaagtgaaagtaaaaagtggtcactttgatccctgaaccaaaaatcaatatcctcaaattaaatctcaaatccctaa 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 429
Target Start/End: Complemental strand, 6185 - 6109
Alignment:
Q  355 aaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||    
T  6185 aaagtgaaagtaaaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaatataatctcaaattcctaa 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 36464 - 36401
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||||    
T  36464 aaaatggtcactttgatccctgaaccgaaaatcaatatcctaaaattgaaactcaaatccctaa 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 425
Target Start/End: Complemental strand, 31239924 - 31239847
Alignment:
Q  350 gaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||| ||||||  ||||||||||||| || | |||||| |||||||||||||||||||||||||||||||||    
T  31239924 gaactaaagtcaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 31239847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 429
Target Start/End: Complemental strand, 12676410 - 12676347
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    ||||| |||||||| |||||| |||||||||| ||||| | |||||||||||||||||||||||    
T  12676410 aaaattgtcactttagtccctaaaccgaaaattaatatacacaaattgaatctcaaatccctaa 12676347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 19600179 - 19600101
Alignment:
Q  352 actaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||||||  |||||||||||||||||| | || ||||||| |||||||| ||||||||||||| || |||||    
T  19600179 actaaagtgaaagtagaaaatggtcactttggtcc-taaatcgaaaattaatatccctaaattgaatctcagattcctaa 19600101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 429
Target Start/End: Original strand, 29845665 - 29845745
Alignment:
Q  349 agaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| |||||  |||| |||| ||||||| ||||| |||||||||||||| ||  ||||||||| ||||||||||    
T  29845665 agaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatctcc--attgaatctaaaatccctaa 29845745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 29856949 - 29857010
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||| ||||||| ||||| |||||||||||||| ||  ||||||||| ||||||||||    
T  29856949 aaaatggtcattttggtctctgaatcgaaaatcaatatctcc--attgaatctaaaatccctaa 29857010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 30748178 - 30748233
Alignment:
Q  352 actaaagtgaaagtaaaa--tggtcactttggtccctgaaccgaaaatcaatatcc 405  Q
    ||||||||||||||||||  |||||| ||||||||||||| | |||||||||||||    
T  30748178 actaaagtgaaagtaaaaaatggtcaatttggtccctgaatcaaaaatcaatatcc 30748233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 429
Target Start/End: Original strand, 1870 - 1950
Alignment:
Q  349 agaactaaagtgaaagta--aaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||||| |||||  |||| |||| ||||||| ||||| |||||||||||||| ||  ||||||||| ||||||||||    
T  1870 agaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatctcc--attgaatctaaaatccctaa 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 3151 - 3212
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||||||| ||||||| ||||| |||||||||||||| ||  ||||||||| ||||||||||    
T  3151 aaaatggtcattttggtctctgaatcgaaaatcaatatctcc--attgaatctaaaatccctaa 3212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 8723 - 8766
Alignment:
Q  386 tgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| ||||||||||||||||| || ||||||||||||||||    
T  8723 tgaaccaaaaatcaatatccccaacttaaatctcaaatccctaa 8766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 79277 - 79340
Alignment:
Q  366 aaaatggtcactttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatccctaa 429  Q
    |||||| |||||||||||||||||   ||||||||||| || |||||||||||| ||| |||||    
T  79277 aaaatgatcactttggtccctgaataaaaaatcaatatgcctaaattgaatctcgaattcctaa 79340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 425
Target Start/End: Complemental strand, 93044 - 92996
Alignment:
Q  377 tttggtccctgaaccgaaaatcaatatccccaaattgaatctcaaatcc 425  Q
    |||||||||| ||  ||||||||||||||||||||| ||||| ||||||    
T  93044 tttggtccctaaattgaaaatcaatatccccaaattaaatctaaaatcc 92996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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