View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3354_low_13 (Length: 250)
Name: NF3354_low_13
Description: NF3354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3354_low_13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 44018426 - 44018669
Alignment:
| Q |
7 |
tcgaagaatattcaatacccgcttatatatttcagttctaagaggccttgagaacattcccttcttcaaagtgattgagattgcattgtttggaagctta |
106 |
Q |
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| T |
44018426 |
tcgaagaatattcaatacccgcttatatatttcagttctaagaggccttgagaacattcccttcttcaaagtgattgagattgcattgtttggaagctta |
44018525 |
T |
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| Q |
107 |
ctccaatcctcttcaacaaatgtaatcctcatgaagtctgaagcatatgccgcaaaatgctttaccacatggtttgaggtttcaagttcgggaccaaggc |
206 |
Q |
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| T |
44018526 |
ctccaatcctcttcaacaaatgtaatcctcatgaagtctgaagcatatgccgcaaaatgctttaccacatggtttgaggtttcaagttcgggaccaaggc |
44018625 |
T |
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| Q |
207 |
aataaatctttgacggggtaatcaaggctcgatgacaactcatt |
250 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
44018626 |
aataaatctttgatggggtaatcaaggctcgatgacaactcatt |
44018669 |
T |
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