View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3355_low_14 (Length: 232)
Name: NF3355_low_14
Description: NF3355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3355_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 43094182 - 43094295
Alignment:
| Q |
100 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43094182 |
agttcttcattcacattctcattccaactattagtatcccaacctttgctatctccatcaacatcaaccctttcttcaccctcaacaaattcttcatttt |
43094281 |
T |
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| Q |
200 |
cacccttcacagat |
213 |
Q |
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|||||||||||||| |
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| T |
43094282 |
cacccttcacagat |
43094295 |
T |
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