View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3356_low_29 (Length: 254)
Name: NF3356_low_29
Description: NF3356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3356_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 35866406 - 35866628
Alignment:
| Q |
22 |
ctgcttaagttatttaactatccaaagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgacttttctatagtatagaaagtg |
121 |
Q |
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| T |
35866406 |
ctgcttaacttatttaactatccaaagtttcaaacaagctcttactgtgttcaacatgtgttttttagtgcctaatgacttttctatagtatagaaagtg |
35866505 |
T |
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| Q |
122 |
gaacttactcgtaattaacattataatcctaagtttgtaaaataaaccattagaccaagaagcttaacaggggagtaaaaaatttgatcaattgggacaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35866506 |
gaacttactcgtaattaacattataatcctaagtttgtaaaataaaccattagaccaagaagcttaacaggggagtaaaaaatttgatcaattgggacaa |
35866605 |
T |
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| Q |
222 |
ttaaactcattctttggcctttg |
244 |
Q |
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| T |
35866606 |
taaaactcattctttggtctttg |
35866628 |
T |
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