View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3363_high_29 (Length: 251)
Name: NF3363_high_29
Description: NF3363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3363_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33751461 - 33751706
Alignment:
| Q |
1 |
ttcagtcctactgtatatcaaatcaagtatatgaattgagttcaatactttgacaattatctgagataagcagaagttgaggcagatattgttatccaat |
100 |
Q |
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| T |
33751461 |
ttcagtcctactgtatatcaaatcaagtatatgaattgagttcaatactttgacaattatctgagataagcagaagttgaggcagatattgttatccaat |
33751560 |
T |
|
| Q |
101 |
agaagtaaaagatcaggactagtgaaataggtgcatattatgcttgcaaaatttgagatgccaataagttatacttatgtcctgttatgtgagaatttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751561 |
agaagtaaaagatcaggactagtgaaataggtgcatattatgcttgcaaaatttgagatgccaataagttatacttatgtcctgttatgtgagaatttgt |
33751660 |
T |
|
| Q |
201 |
tgtgtttgttaatattgtaattgtgtttcctagctttcatctctct |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
33751661 |
tgtgtttgttaatattgtaattgtgtttcctagctttcatttctct |
33751706 |
T |
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