View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3365_high_73 (Length: 252)
Name: NF3365_high_73
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3365_high_73 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 648500 - 648265
Alignment:
| Q |
1 |
atatccatattttttgagatactaagcttgattaaattgaaaaacctaaaacatttaacagaattcatgacaccctaactctgaatctctttggccatca |
100 |
Q |
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| T |
648500 |
atatccatattttttgagatactaagcttgattaaattgaaaaacctaaaacatttaacagaattcatgacaccctaactctgaatctctttggccatca |
648401 |
T |
|
| Q |
101 |
acgtaaaagagtttaaattgatcaaccggcagaaatcattaagctagaaagtgacatattctgatagcaaccaaggatttacatgcaatgaaattgagtt |
200 |
Q |
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| T |
648400 |
acgtaaaagagtttaaattgatcaaccggcagaaatcattaagctagaaagtgacatattctgatagcaaccaaggatttacatgcaatgaaattgagtt |
648301 |
T |
|
| Q |
201 |
tagcagagaaaagtttacatccgctgaccaacttat |
236 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
648300 |
aagcagagaaaagtttacatccgctgaccaacttat |
648265 |
T |
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