View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3365_high_74 (Length: 251)

Name: NF3365_high_74
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3365_high_74
NF3365_high_74
[»] chr4 (4 HSPs)
chr4 (135-251)||(19605868-19605984)
chr4 (20-134)||(19625253-19625366)
chr4 (138-251)||(17959778-17959891)
chr4 (139-244)||(10112411-10112516)
[»] scaffold0417 (1 HSPs)
scaffold0417 (129-251)||(3515-3637)
[»] chr7 (5 HSPs)
chr7 (129-251)||(20148517-20148639)
chr7 (169-251)||(16175156-16175238)
chr7 (129-251)||(16196543-16196665)
chr7 (142-251)||(16094651-16094760)
chr7 (138-251)||(23099800-23099912)
[»] chr5 (5 HSPs)
chr5 (149-251)||(26132604-26132705)
chr5 (141-251)||(13456885-13456995)
chr5 (129-210)||(23595729-23595810)
chr5 (129-216)||(37279976-37280066)
chr5 (138-251)||(17364081-17364194)
[»] chr8 (2 HSPs)
chr8 (129-249)||(25263175-25263296)
chr8 (211-251)||(21695078-21695118)
[»] chr3 (6 HSPs)
chr3 (138-251)||(15538955-15539068)
chr3 (138-251)||(19632046-19632159)
chr3 (143-244)||(19614326-19614427)
chr3 (135-245)||(14305496-14305606)
chr3 (138-251)||(19659939-19660052)
chr3 (138-246)||(2547209-2547317)
[»] scaffold0039 (1 HSPs)
scaffold0039 (150-246)||(106058-106154)
[»] chr6 (5 HSPs)
chr6 (139-251)||(23299570-23299682)
chr6 (135-202)||(22545764-22545831)
chr6 (138-247)||(14354211-14354320)
chr6 (183-251)||(12487701-12487769)
chr6 (138-251)||(23294365-23294478)
[»] scaffold0001 (1 HSPs)
scaffold0001 (138-251)||(154904-155017)
[»] scaffold0111 (1 HSPs)
scaffold0111 (169-251)||(30337-30419)
[»] scaffold0190 (1 HSPs)
scaffold0190 (139-246)||(1623-1730)


Alignment Details
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 19605984 - 19605868
Alignment:
Q  135 caatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaac 234  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19605984 caatttcatccaatcttcacaaactacaacaacaattcaaaccccaataacatacaaacatatataatcatatataaagtgaatttacacatgtttgaac 19605885  T
Q  235 aataatcactcatcaat 251  Q
    |||||||||||||||||    
T  19605884 aataatcactcatcaat 19605868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 19625366 - 19625253
Alignment:
Q  20 gttgtgtcaaaatcataataaaatgcctnnnnnnnnnntcataacaaaaatactacctctgttttaaattatacgctttggaaaacaaattgtttcaaat 119  Q
    ||||||||||||||||||||||||||||          |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  19625366 gttgtgtcaaaatcataataaaatgcctcaaaaaaaa-tcataataaaaatactacctctgttctaaattatacgctttggaaaacaaattgtttgaaat 19625268  T
Q  120 tatatgttgttttat 134  Q
    |||||||| ||||||    
T  19625267 tatatgttattttat 19625253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 17959778 - 17959891
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| || |||   ||||||| ||||  || || |||||||| |||| ||| | | ||||||||||| |||||||| ||||||    
T  17959778 tttcattcaaacttcacaaacaaccacacaaattcaaaccccatcaagatacaaacataaataagcatttgtgaagtgaatttaaacatgtttcaacaat 17959877  T
Q  238 aatcactcatcaat 251  Q
    ||||||||||||||    
T  17959878 aatcactcatcaat 17959891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 10112516 - 10112411
Alignment:
Q  139 ttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaata 238  Q
    |||||| || |||| || || ||| |||| ||| ||| ||||| ||||| ||||||||||||||||||||| |||||| |  | ||||||||| ||||||    
T  10112516 ttcattgaaacttctcagacaacaccaacaattgaaaccccaagaacatacaaacatatataatcatatatcaagtgattagaaacatgtttggacaata 10112417  T
Q  239 atcact 244  Q
    ||||||    
T  10112416 atcact 10112411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 3515 - 3637
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgt 228  Q
    |||| ||| |||||||||| |||||||||| |  ||| | ||||||| ||||| ||||| ||| ||||||||||||| ||| ||||||||||  ||||||    
T  3515 ttttctcattttcattcaaacttcacaaaccagcacaccaattcaaaccccaacaacatacaagcatatataatcatttatgaagtgaatttgaacatgt 3614  T
Q  229 ttgaacaataatcactcatcaat 251  Q
    |  ||||||||||||||||||||    
T  3615 tccaacaataatcactcatcaat 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 20148517 - 20148639
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgt 228  Q
    |||| ||| |||||||||| |||||| ||| || ||| | ||||||||||||| | ||| |||||||||||| |||| ||| ||||||||||| ||||||    
T  20148517 ttttctcattttcattcaaacttcactaacaaccacaccaattcaaatcccaacagcatacaaacatatatactcatttatgaagtgaatttaaacatgt 20148616  T
Q  229 ttgaacaataatcactcatcaat 251  Q
    |  |||||||||||||| |||||    
T  20148617 tccaacaataatcactcgtcaat 20148639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 16175156 - 16175238
Alignment:
Q  169 attcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactcatcaat 251  Q
    ||||||| ||||| ||||| ||||||| ||||||||| ||| ||||||| ||| |||||||  ||||||||||||||||||||    
T  16175156 attcaaaccccaacaacatacaaacatttataatcatttatgaagtgaaattaaacatgttccaacaataatcactcatcaat 16175238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 16196543 - 16196665
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgt 228  Q
    |||| ||| |||||||||| |||||||||| || |||  |||||||| ||||| |||||  |||| ||||||||||| ||| ||||||||||| | ||||    
T  16196543 ttttctcattttcattcaaacttcacaaacaaccacactgattcaaaccccaacaacatataaacttatataatcatttatgaagtgaatttaaatatgt 16196642  T
Q  229 ttgaacaataatcactcatcaat 251  Q
    |   |||||||| ||||||||||    
T  16196643 tcctacaataattactcatcaat 16196665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 16094651 - 16094760
Alignment:
Q  142 attcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatc 241  Q
    |||||| |||||||||| || ||| | ||||||| ||||  ||||| ||||||| ||||| ||| ||| ||||||||||  |||||||| || | |||||    
T  16094651 attcaaacttcacaaacaactacaccaattcaaaccccaccaacatacaaacatgtataaccatttatgaagtgaatttgaacatgtttcaatagtaatc 16094750  T
Q  242 actcatcaat 251  Q
    ||||||||||    
T  16094751 actcatcaat 16094760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 23099800 - 23099912
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    ||||||| || |||||||||| || ||| | ||||||| ||||  |||||  |||||| || || ||| ||| ||||||||||  |||||||| ||||||    
T  23099800 tttcatttaaacttcacaaacaaccacaccaattcaaaccccatcaacatataaacatgtaaaa-catttatgaagtgaatttgaacatgtttcaacaat 23099898  T
Q  238 aatcactcatcaat 251  Q
    ||||||| ||||||    
T  23099899 aatcacttatcaat 23099912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 26132604 - 26132705
Alignment:
Q  149 cttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactcatc 248  Q
    |||||||||| |||||||| |||||||||| || |||||  |||||||||||||||| ||| || |||||||| |||||||| ||||||||||||||| |    
T  26132604 cttcacaaacaacaacaacaattcaaatcc-aacaacataaaaacatatataatcatttatcaaatgaatttagacatgtttcaacaataatcactcacc 26132702  T
Q  249 aat 251  Q
    |||    
T  26132703 aat 26132705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 13456885 - 13456995
Alignment:
Q  141 cattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataat 240  Q
    ||||||| |||||||||| || |||   ||||||| ||||| ||||| ||| | ||| ||||||| ||| ||||||||||| |||||||  |||||||||    
T  13456885 cattcaaacttcacaaacaaccacacaaattcaaaccccaacaacatacaagcttatgtaatcatttatgaagtgaatttaaacatgttccaacaataat 13456984  T
Q  241 cactcatcaat 251  Q
    |||||||||||    
T  13456985 cactcatcaat 13456995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 23595810 - 23595729
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatata 210  Q
    |||| ||| |||| ||||| |||||||||  |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  23595810 ttttctcattttctttcaaacttcacaaaaaacaacaacaattcaaaccccaacaacatacaaacatatataatcatatata 23595729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 37279976 - 37280066
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacga---ttcaaatcccaataacattcaaacatatataatcatatataaagtga 216  Q
    |||| ||| |||||||||| |||||||||| |||||||| |   |||||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  37279976 ttttctcattttcattcaaacttcacaaacaacaacaacaacaattcaaaccccaacaacatacaaacatatataatcatatatcaagtga 37280066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 17364081 - 17364194
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| || |||   | ||||| ||||  ||||| |||||||| |||| ||| ||| |||||||||||  ||||||| ||||||    
T  17364081 tttcattcaaacttcacaaacaaccacacaaagtcaaaccccatcaacatgcaaacataaataaacatttattaagtgaatttaagcatgtttcaacaat 17364180  T
Q  238 aatcactcatcaat 251  Q
    ||||||||| ||||    
T  17364181 aatcactcaccaat 17364194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 25263175 - 25263296
Alignment:
Q  129 ttttatcaatttcattcaatcttcacaaactacaacaacgattcaaatccc-aataacattcaaacatatataatcatatataaagtgaatttacacatg 227  Q
    |||| ||| ||| |||||| |||||||||| || ||| |  |||||| ||| || ||||| ||||||||||||||||| ||| ||||||||||| |||||    
T  25263175 ttttctcatttttattcaaacttcacaaacaaccacaccacttcaaacccccaacaacatacaaacatatataatcatttatgaagtgaatttaaacatg 25263274  T
Q  228 tttgaacaataatcactcatca 249  Q
    ||  ||||||||||||||||||    
T  25263275 ttccaacaataatcactcatca 25263296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 21695078 - 21695118
Alignment:
Q  211 aagtgaatttacacatgtttgaacaataatcactcatcaat 251  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  21695078 aagtgaatttaaacatgtttcaacaataatcactcatcaat 21695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 15538955 - 15539068
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| |  ||| | ||||||| ||||  ||||| ||||||||   || ||| ||||||||||||||| |||||||| ||||||    
T  15538955 tttcattcaaacttcacaaacaatcacaccaattcaaaacccatcaacatacaaacataatcaaacatttataaagtgaatttaaacatgtttcaacaat 15539054  T
Q  238 aatcactcatcaat 251  Q
    ||||||||||||||    
T  15539055 aatcactcatcaat 15539068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 19632159 - 19632046
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| ||||| |||| || ||| | ||||||| ||||  ||||| |||||||  |||| ||| ||| |||||||||||  ||||||| ||||||    
T  19632159 tttcattcaaacttcaaaaacaaccacaccaattcaaaccccatcaacatacaaacatgcataaacatttatgaagtgaatttaagcatgtttcaacaat 19632060  T
Q  238 aatcactcatcaat 251  Q
    ||||||||||||||    
T  19632059 aatcactcatcaat 19632046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 19614326 - 19614427
Alignment:
Q  143 ttcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatca 242  Q
    ||||| |||||||||| |  ||| | ||||||| ||||  ||||| ||||||| ||||| ||| ||| ||||||||||| |||||||| |||||||||||    
T  19614326 ttcaaacttcacaaacaatcacatcaattcaaaccccatcaacatacaaacatgtataaacatttatgaagtgaatttaaacatgtttcaacaataatca 19614425  T
Q  243 ct 244  Q
    ||    
T  19614426 ct 19614427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 14305606 - 14305496
Alignment:
Q  135 caatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaac 234  Q
    ||||||||| ||| |||| ||||| |||||||| |||||||   ||| ||||| ||||||||||||||||| ||  |||||| |  | ||| |||||| |    
T  14305606 caatttcatccaaacttctcaaacaacaacaacaattcaaacttcaacaacatacaaacatatataatcatttaccaagtgattagaaacaggtttgacc 14305507  T
Q  235 aataatcactc 245  Q
    |||||||||||    
T  14305506 aataatcactc 14305496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 19660052 - 19659939
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| ||||| ||||  | ||| | ||||||| ||||  ||||| ||||||  ||||  ||| ||| |||||||||||  ||||||| ||||||    
T  19660052 tttcattcaaacttcataaacatccacaccaattcaaaccccatcaacatacaaacaggtatagacatttatgaagtgaatttaagcatgtttcaacaat 19659953  T
Q  238 aatcactcatcaat 251  Q
    ||||||||||||||    
T  19659952 aatcactcatcaat 19659939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 2547317 - 2547209
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| || ||| | ||||||| ||||  ||||| |||||||| | ||  ||  || ||||||||||| |||||||| |||||     
T  2547317 tttcattcaaacttcacaaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaac 2547218  T
Q  238 aatcactca 246  Q
    |||||||||    
T  2547217 aatcactca 2547209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 106154 - 106058
Alignment:
Q  150 ttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactca 246  Q
    |||||| || ||| |||| |||||||   ||| ||||| |||| |||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  106154 ttcacagacaacaccaacaattcaaacttcaacaacatacaaatatatataatcatatatcaagtgaatttagacatgtttgaacaacaatcactca 106058  T

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Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 23299570 - 23299682
Alignment:
Q  139 ttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaata 238  Q
    ||||||||| ||||| |||| || ||| | |||||||  |||  ||||| |||||||| |||| ||| ||| ||||||||||| |||||||| |||||||    
T  23299570 ttcattcaaacttcaaaaacaaccacaccaattcaaactccatcaacatacaaacataaataaacatttatgaagtgaatttaaacatgtttcaacaata 23299669  T
Q  239 atcactcatcaat 251  Q
    |||||||||||||    
T  23299670 atcactcatcaat 23299682  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 22545764 - 22545831
Alignment:
Q  135 caatttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataat 202  Q
    ||||||||| ||| |||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||    
T  22545764 caatttcatccaaacttcacaaacaacaacaacaattcaaaccccaataacatacaaacatatataat 22545831  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 14354211 - 14354320
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| || |||   ||||||| ||||  ||||  ||||||||||||| ||| ||||||||||||| | |||||||| |||||     
T  14354211 tttcattcaaacttcacaaacaaccacacaaattcaaaccccatcaacagacaaacatatataaacatttataaagtgaattcaaacatgtttcaacaag 14354310  T
Q  238 aatcactcat 247  Q
    ||||||||||    
T  14354311 aatcactcat 14354320  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 12487701 - 12487769
Alignment:
Q  183 aacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactcatcaat 251  Q
    ||||| ||||||| ||||| ||| |||  |||||||||| |||| ||| ||||||||||||||||||||    
T  12487701 aacatacaaacatgtataaacatttatgtagtgaatttaaacatatttcaacaataatcactcatcaat 12487769  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 23294478 - 23294365
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| |||||||||| |  |||   ||||||| || |  ||||| ||||||| | ||| ||| ||| ||||||||||| |||| ||| ||||||    
T  23294478 tttcattcaaacttcacaaacaatcacactaattcaaaaccaatcaacatacaaacatgtgtaaacatctatgaagtgaatttaaacatattttaacaat 23294379  T
Q  238 aatcactcatcaat 251  Q
    ||||||| ||||||    
T  23294378 aatcacttatcaat 23294365  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 154904 - 155017
Alignment:
Q  138 tttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaat 237  Q
    |||||||||| ||||| |||| |  ||| ||||| ||| | || |||||| ||||||| ||||| ||| ||| ||||||||||| |||||||| ||| ||    
T  154904 tttcattcaaacttcaaaaacaatcacaccgatttaaacctcattaacatacaaacatgtataaacatttatgaagtgaatttaaacatgtttcaaccat 155003  T
Q  238 aatcactcatcaat 251  Q
    ||||||||||||||    
T  155004 aatcactcatcaat 155017  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 30419 - 30337
Alignment:
Q  169 attcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactcatcaat 251  Q
    ||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||||| |||||||   |||| ||||||||||||||    
T  30419 attcaaaccccaacaacataccaacatatataatcatttatgaagtgaatttaaacatgttccgacaacaatcactcatcaat 30337  T

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Target: scaffold0190 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 1623 - 1730
Alignment:
Q  139 ttcattcaatcttcacaaactacaacaacgattcaaatcccaataacattcaaacatatataatcatatataaagtgaatttacacatgtttgaacaata 238  Q
    ||||||||| ||||| |||| || ||| | ||||||||||||  ||||| |||||| ||| || ||| ||| ||||||||||| ||| |||| ||||| |    
T  1623 ttcattcaaacttcataaacaaccacaccaattcaaatcccataaacatacaaacacatacaaacatttatgaagtgaatttaaacaagtttcaacaaca 1722  T
Q  239 atcactca 246  Q
    ||||||||    
T  1723 atcactca 1730  T

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