View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3365_high_86 (Length: 245)

Name: NF3365_high_86
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3365_high_86
NF3365_high_86
[»] chr6 (47 HSPs)
chr6 (1-207)||(27603106-27603312)
chr6 (2-207)||(27609532-27609736)
chr6 (4-204)||(27676029-27676228)
chr6 (4-207)||(27591427-27591629)
chr6 (2-207)||(27680528-27680732)
chr6 (2-207)||(28787819-28788023)
chr6 (2-207)||(28793940-28794144)
chr6 (2-200)||(27716918-27717115)
chr6 (1-207)||(27704675-27704880)
chr6 (2-171)||(26624828-26624997)
chr6 (2-171)||(26730805-26730974)
chr6 (2-207)||(27697001-27697205)
chr6 (2-171)||(31286122-31286291)
chr6 (2-171)||(26648036-26648205)
chr6 (2-171)||(26754004-26754173)
chr6 (2-207)||(26804024-26804228)
chr6 (2-134)||(26813115-26813247)
chr6 (2-134)||(26863137-26863269)
chr6 (2-151)||(27529774-27529923)
chr6 (2-105)||(26885648-26885751)
chr6 (1-134)||(25491791-25491924)
chr6 (4-105)||(26657542-26657643)
chr6 (4-105)||(26763513-26763614)
chr6 (2-105)||(26637206-26637309)
chr6 (2-105)||(26743172-26743275)
chr6 (2-115)||(25546546-25546659)
chr6 (2-115)||(26057485-26057598)
chr6 (2-115)||(26077455-26077568)
chr6 (2-105)||(25075445-25075548)
chr6 (1-156)||(27426077-27426232)
chr6 (2-115)||(25484622-25484735)
chr6 (2-115)||(26144431-26144544)
chr6 (2-105)||(2186383-2186486)
chr6 (2-105)||(26850290-26850393)
chr6 (2-115)||(25581285-25581398)
chr6 (2-154)||(27216015-27216167)
chr6 (2-105)||(26978946-26979049)
chr6 (2-115)||(25512454-25512567)
chr6 (2-106)||(27663715-27663819)
chr6 (2-105)||(26951309-26951412)
chr6 (2-105)||(26960691-26960794)
chr6 (2-129)||(29827555-29827682)
chr6 (2-59)||(28141104-28141161)
chr6 (2-59)||(28150741-28150798)
chr6 (4-79)||(29469774-29469849)
chr6 (2-60)||(28097007-28097065)
chr6 (2-60)||(29842547-29842605)
[»] chr1 (5 HSPs)
chr1 (5-207)||(266761-266962)
chr1 (2-125)||(26137448-26137571)
chr1 (2-102)||(28126200-28126300)
chr1 (5-115)||(5921978-5922088)
chr1 (2-101)||(28132012-28132111)
[»] scaffold1870 (1 HSPs)
scaffold1870 (2-207)||(347-551)
[»] scaffold0419 (1 HSPs)
scaffold0419 (2-204)||(9065-9266)
[»] scaffold0277 (2 HSPs)
scaffold0277 (2-207)||(3115-3319)
scaffold0277 (2-207)||(12078-12282)
[»] scaffold0349 (1 HSPs)
scaffold0349 (2-200)||(1957-2155)
[»] chr8 (2 HSPs)
chr8 (4-207)||(29272250-29272452)
chr8 (8-79)||(16371673-16371744)
[»] chr2 (1 HSPs)
chr2 (2-105)||(17991713-17991816)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-156)||(61131-61286)
[»] chr4 (7 HSPs)
chr4 (1-156)||(18075323-18075478)
chr4 (2-105)||(18653995-18654098)
chr4 (2-105)||(18678075-18678178)
chr4 (2-105)||(18722588-18722691)
chr4 (2-58)||(18688179-18688235)
chr4 (2-58)||(18697965-18698021)
chr4 (2-58)||(18730060-18730116)
[»] chr5 (1 HSPs)
chr5 (2-125)||(16692427-16692550)


Alignment Details
Target: chr6 (Bit Score: 175; Significance: 2e-94; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27603312 - 27603106
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27603312 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagacgatatagttcatg 27603213  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatct 200  Q
    || |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  27603212 ttctaacagaaaacactgtgagtaagattgatatataatatcaatttgttatttagttttaatatgacttttggtctttttggactaaatatgatcatct 27603113  T
Q  201 catacta 207  Q
    |||||||    
T  27603112 catacta 27603106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 27609736 - 27609532
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  27609736 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgt 27609637  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||  |||| |||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||     
T  27609636 tttaagagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatacgac-tttgctctttttgcactaaatatgatcatctg 27609538  T
Q  202 atacta 207  Q
    ||||||    
T  27609537 atacta 27609532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 27676228 - 27676029
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgttt 103  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  27676228 ttgatagaggtcatgggtaaagaagtggtccgacaagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatgatatagttcatgttt 27676129  T
Q  104 taacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctcat 203  Q
    |||||||||| | |||||||||||||||||| ||   ||||||||||||||||||||||||| | |||||| | |||||| |||||||||| ||||||||    
T  27676128 taacagaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttaatac-aattttgctcattttggactaaatatgaccatctcat 27676030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 27591629 - 27591427
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgttt 103  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  27591629 ttgatagaggtcatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagcaggttatggtctcaagatgatatagttcatgttt 27591530  T
Q  104 taacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctcat 203  Q
    ||| |||||| | |||| ||||||||||||| ||   ||||||||||||||||||||||||| || ||||| | |||||| |||||||||| ||||||||    
T  27591529 taaaagaaaacactgtgcgtaagattgatatctatgttcaatttgttatttagttttaatacaac-tttgctcattttggactaaatatgaccatctcat 27591431  T
Q  204 acta 207  Q
    ||||    
T  27591430 acta 27591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 27680528 - 27680732
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||    
T  27680528 acttgataaaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaacgaagtaggttatggcgtcaagaagatataattcatgt 27680627  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||| ||||||||| ||  |||| |||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||     
T  27680628 tttaaaagaaaacactgtgagtatgattgatatctatgatcattttgttatttagttttaatacgac-tttgctctttttgcactaaatatgatcatctg 27680726  T
Q  202 atacta 207  Q
    ||||||    
T  27680727 atacta 27680732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 28787819 - 28788023
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28787819 acttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttaatgt 28787918  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| |  ||||||| ||||||||| ||   ||||||||||||||| |||| ||||||| ||||| |||||||| |||||||||| ||||||    
T  28787919 tttaaaagaaaacaccgtgagtatgattgatatttatgttcaatttgttatttaattttgatacgac-tttgctctttttggactaaatatgaccatctc 28788017  T
Q  202 atacta 207  Q
    ||||||    
T  28788018 atacta 28788023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 28793940 - 28794144
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28793940 acttgatagaagacatgggtaaagaagtcgtccgacaagaatcgcctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttaatgt 28794039  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| |  ||||||| ||||||||| ||   ||||||||||||||| |||| ||||||| ||||| |||||||| |||||||||| ||||||    
T  28794040 tttaaaagaaaacaccgtgagtatgattgatatttatgttcaatttgttatttaattttgatacgac-tttgctctttttggactaaatatgaccatctc 28794138  T
Q  202 atacta 207  Q
    ||||||    
T  28794139 atacta 28794144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 27717115 - 27716918
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  27717115 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgt 27717016  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatct 200  Q
    ||||| |||||| | |||||||||||||||||| ||  |||| ||||||||||||||||||||| || ||||| |||||||  ||||||||||||||||    
T  27717015 tttaagagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatacaac-tttgctctttttgaactaaatatgatcatct 27716918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27704880 - 27704675
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || || |||||||||||| |||    
T  27704880 aacttgatagaggatatgggtaaagaagtcgtccgacaagaatcaattaaagagcctggagaaagaagtaggttatgctgccatgatgatatagttaatg 27704781  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatct 200  Q
    | |||| |||||| | |||||||||||||||||| ||  |||| |||||||||||||||||||| ||| ||||| |||||||| |||||||||| |||||    
T  27704780 tcttaaaagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatatgac-tttgctctttttggactaaatatgaccatct 27704682  T
Q  201 catacta 207  Q
    |||||||    
T  27704681 catacta 27704675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 26624828 - 26624997
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  26624828 acttgatagaggacatgggtaaagcaatcgtccgacaagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgt 26624927  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttt 171  Q
    ||||| |||||| |||||||||||||||||||| ||  |||||||| ||||||||||||||||| |||||    
T  26624928 tttaaaagaaaacagtgtgagtaagattgatatctatgatcaatttattatttagttttaatactacttt 26624997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 26730805 - 26730974
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  26730805 acttgatagaggacatgggtaaagcaatcgtccgacaagaatcacctaaagagcctggagaacgaagtagattatggtgtcaagatgatatatttcatgt 26730904  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttt 171  Q
    ||||| |||||| |||||||||||||||||||| ||  |||||||| ||||||||||||||||| |||||    
T  26730905 tttaaaagaaaacagtgtgagtaagattgatatctatgatcaatttattatttagttttaatactacttt 26730974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 27697205 - 27697001
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||  ||  ||    
T  27697205 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcaactaaagagcctggagaaagaagtaggttatgctgtcaggatgatataactcgggt 27697106  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||  |||| |||||||||||||||||||||||| ||||| || ||||  ||||||||||||||||     
T  27697105 tttaagagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatacgac-tttgctctatttgcactaaatatgatcatctg 27697007  T
Q  202 atacta 207  Q
    ||||||    
T  27697006 atacta 27697001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 31286122 - 31286291
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||     
T  31286122 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagccaggagaaagaagtaggctatggtgtcaagatgatatagttcatgc 31286221  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttt 171  Q
    |||||  ||||| | |||||||||||||||||| ||   |||||||||||||||||||||| ||||||||    
T  31286222 tttaaatgaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttaaaacgacttt 31286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 26648036 - 26648205
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  26648036 acttgataaaggacatgggtaaggaagtagtccgacaagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgt 26648135  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttt 171  Q
    ||||| |||||| | ||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||    
T  26648136 tttaaaagaaaacactgtgagtaagattaatatctatgatcaatttgttatttagttttaatacgacttt 26648205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 26754004 - 26754173
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  26754004 acttgataaaggacatgggtaaggaagtagtccgacaagaatcacgtaaagagcctggagaacaaagtaggttatggtgtcaagatgaaatagttcatgt 26754103  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttt 171  Q
    ||||| |||||| | ||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||    
T  26754104 tttaaaagaaaacactgtgagtaagattaatatctatgatcaatttgttatttagttttaatacgacttt 26754173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 26804024 - 26804228
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||||||| |||| || ||||||||||||||    
T  26804024 acttgataaaggacatgggtaaagaagtcgtccgacaagaatcacctaaagatcctgaaaaacgaagtaggttatggcgtcatgaagatatagttcatgt 26804123  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    | ||| |||||| | |||||||||||||||||| ||   |||||||||||||||||||  ||||||| |||||  |||| || ||| |||||| ||||||    
T  26804124 tataaaagaaaacattgtgagtaagattgatatttatgttcaatttgttatttagtttagatacgac-tttgcatttttaggactacatatgaccatctc 26804222  T
Q  202 atacta 207  Q
    ||||||    
T  26804223 atacta 26804228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 26813115 - 26813247
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||| ||| |||||||||| | |||| ||||||||||||| |||| || |||||| |||||||| ||||||||||||||||||||||||||||    
T  26813115 acttgatagagcacacgggtaaagaaattgtccaacaagaatcacctgaagaaccaggagaacgaagtaggctatggtgtcaagatgatatagttcatgt 26813214  T
Q  102 tttaacagaaaatagtgtgagtaagattgatat 134  Q
    ||||| |||||| | ||||||||||||||||||    
T  26813215 tttaaaagaaaacattgtgagtaagattgatat 26813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 26863137 - 26863269
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| || ||| ||||||||||||||||||| ||||||||| | || ||    
T  26863137 acttgatagaggacatgggcaaagaaatcgtccgacaagaatctcctaaagagccgggtgaacgaagtaggttatggtgtcatgatgatataatccacgt 26863236  T
Q  102 tttaacagaaaatagtgtgagtaagattgatat 134  Q
    ||||  |||||| | ||||||||||||||||||    
T  26863237 tttagaagaaaacactgtgagtaagattgatat 26863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 27529923 - 27529774
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| | |||||||| |||| | |   |||||||||||||||    
T  27529923 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacccgatgagcctggagaacgcagtaggttgtggtttgagcgtgatatagttcatgt 27529824  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgtta 151  Q
    ||||| | |||| | |||||||||||||||||| ||  | ||||||||||    
T  27529823 tttaaaaaaaaacactgtgagtaagattgatatctaggaacaatttgtta 27529774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26885648 - 26885751
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||| |||||||||||||||||||| |||| || |||||||||  |||||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  26885648 acttggtagaggacatgggtaaagaaatcgttcggcaagaatcaagtaaagagcctggagaacgtagtaggttatggtgtcacgatgatatagttcatgt 26885747  T
Q  102 ttta 105  Q
    ||||    
T  26885748 ttta 26885751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 25491924 - 25491791
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||| || ||||||||| | |||||||| |||||||  |||||||| ||||| |    
T  25491924 aacttgatagagcacatgggtaaagaagtcgttcgacaagaatcacgtaatgatcctggagaacgtagtaggttgtggtgtcccgatgatatggttcaag 25491825  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatat 134  Q
    |||||| |||||| |  || ||||||||||||||    
T  25491824 ttttaagagaaaacacggtaagtaagattgatat 25491791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 26657542 - 26657643
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgttt 103  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||| | |||||||||||||||||  |||| |||||||||||||    
T  26657542 ttgatagaggacatgggtaaagaaatcgtccgacaagaatcaagtaaagagcccggagaacgtagtaggttatggtgtcacaatgacatagttcatgttt 26657641  T
Q  104 ta 105  Q
    ||    
T  26657642 ta 26657643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 26763513 - 26763614
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgttt 103  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||| | |||||||||||||||||  |||| |||||||||||||    
T  26763513 ttgatagaggacatgggtaaagaaatcgtccgacaagaatcaagtaaagagcccggagaacgtagtaggttatggtgtcacaatgacatagttcatgttt 26763612  T
Q  104 ta 105  Q
    ||    
T  26763613 ta 26763614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26637206 - 26637309
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| |||  ||||||||||| | |||||||| |||||||| || ||||||||||||||    
T  26637206 acttgatagaggatatgggtatagaaatcgtccgacaagaatcacgtaataagcctggagaacgcagtaggttgtggtgtcatgacgatatagttcatgt 26637305  T
Q  102 ttta 105  Q
    ||||    
T  26637306 ttta 26637309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26743172 - 26743275
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| |||  ||||||||||| | |||||||| |||||||| || ||||||||||||||    
T  26743172 acttgatagaggatatgggtatagaaatcgtccgacaagaatcacgtaataagcctggagaacgcagtaggttgtggtgtcatgacgatatagttcatgt 26743271  T
Q  102 ttta 105  Q
    ||||    
T  26743272 ttta 26743275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 25546546 - 25546659
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||| | |||||||| |||| ||  |||||||||||| | ||    
T  25546546 acttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgt 25546645  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  25546646 tttaagagataata 25546659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 26057485 - 26057598
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||| | |||||||| |||| ||  |||||||||||| | ||    
T  26057485 acttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaataagcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgt 26057584  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  26057585 tttaagagataata 26057598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 26077455 - 26077568
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||| | |||||||| |||| ||  |||||||||||| | ||    
T  26077455 acttgatagaggacatgggtaaagaagtcgtccgacaagaatctcccaagaagcctggagaacgcagtaggttgtggtttcgcgatgatatagttaacgt 26077554  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  26077555 tttaagagataata 26077568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 25075445 - 25075548
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||  |||||||||||||||| | |||||||| |||| ||| ||||||||| || ||||    
T  25075445 acttgttagaggacatgggtaaagaaatcgtccgacatgaatcaattaaagagcctggagaacgtagtaggttgtggtatcacgatgatatatttgatgt 25075544  T
Q  102 ttta 105  Q
    ||||    
T  25075545 ttta 25075548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27426232 - 27426077
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||||   ||||||||| ||||||| |||||||||| | || | |||||| || | |    
T  27426232 aacttgatagagaacatgggtaaagaactcgtccgactagaatcaccttttgagcctggaaaaagaagcaggttatggtttgaaaaggatatatttgaag 27426133  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttag 156  Q
    || ||  |||||| | ||||||||||||||||||  |  | |||||||||||||||    
T  27426132 ttctagaagaaaacactgtgagtaagattgatatgcaggaacaatttgttatttag 27426077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 25484622 - 25484735
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||  ||||||||||| | |||||||| |||| ||| ||||||||| || | ||    
T  25484622 acttgatagaggacatgggtaaagaagtcgttcgacaagaatctcccaagaagcctggagaacgcagtaggttgtggtttcacgatgatatacttaacgt 25484721  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  25484722 tttaagagataata 25484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 26144431 - 26144544
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||  ||||||||||| | |||||||| |||| ||  |||||||||||| | ||    
T  26144431 acttgatagaggacatgggtaaagaaatcgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcccgatgatatagttaacgt 26144530  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  26144531 tttaagagataata 26144544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 2186383 - 2186486
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||| || | |||||||| ||||  || || |||||||||| |||    
T  2186383 acttgatagaggaaatgggtaaagaaatcgtacgacaagaatcaccaaaagagcctggaaaacgtagtaggttgtggtcccatgaagatatagttcctgt 2186482  T
Q  102 ttta 105  Q
    ||||    
T  2186483 ttta 2186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26850290 - 26850393
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    | |||||||| ||||||   |||||||| ||||||||    
T  26850290 acttgatagaggacatgggtaaagaaatcgtccgacaagaatcaattaaagagcctggaaggcgcagtaggttgtggtgttgtgatgatattgttcatgt 26850389  T
Q  102 ttta 105  Q
    ||||    
T  26850390 ttta 26850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 25581285 - 25581398
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||  | ||||||||| | |||||||| |||| ||| ||||||||| || | ||    
T  25581285 acttgatagaggacatgggtaaagaaatcgtccgacaagaatctcccaagaaccctggagaacgcagtaggttgtggtttcacgatgatatatttgacgt 25581384  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  25581385 tttaagagataata 25581398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 27216015 - 27216167
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||  |  | ||||| ||| | |||||||| |||| ||| |||||||||||||| ||    
T  27216015 acttgatagaggatatgggtagagaagttgtccgacaagaatcacccgacaatcctggggaacgcagtaggttgtggtttcacgatgatatagttcaagt 27216114  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttattt 154  Q
    | ||| ||||||||  |||||||| | | |||| ||  | |||||||||||||    
T  27216115 tctaaaagaaaatatcgtgagtaaaaataatatttatgaacaatttgttattt 27216167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26978946 - 26979049
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||  |||||| ||||||||| | |||||||| |||||||   ||  ||||||||||||    
T  26978946 acttgatagaggatatgggtatagaaatcgtccgacaagaatcaattaaagaacctggagaacgcagtaggttgtggtgtcgtaatagtatagttcatgt 26979045  T
Q  102 ttta 105  Q
    ||||    
T  26979046 ttta 26979049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 25512454 - 25512567
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||  ||||||||||||||| || ||  ||||||||||| | |||||||| |||| ||  ||||||||| || | ||    
T  25512454 acttgatagaggacatgggtaaagaaaccgtccgacaagaatctcccaacaagcctggagaacgcagtaggttgtggtttcgcgatgatatacttaacgt 25512553  T
Q  102 tttaacagaaaata 115  Q
    ||||| ||| ||||    
T  25512554 tttaagagataata 25512567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 27663819 - 27663715
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||| | ||||||| |||| | |||||||||||||||  |||||||||||||||  | | |||||| ||| |||| |||||||||| ||||||    
T  27663819 acttgatagagtatatgggtatagaaatagtccgacaagaatcaattaaagagcctggagagcgcactaggttgtggcgtcatgatgatatagctcatgt 27663720  T
Q  102 tttaa 106  Q
    |||||    
T  27663719 tttaa 27663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26951309 - 26951412
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| ||||||| |||| || ||||||||||||||  || ||| ||||||||| | |||||||| |||| ||  |||||||| ||||||||    
T  26951309 acttgatagaggatatgggtatagaaatcatccgacaagaatcaattagagaacctggagaacgcagtaggttgtggtctcgtgatgatattgttcatgt 26951408  T
Q  102 ttta 105  Q
    ||||    
T  26951409 ttta 26951412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 26960691 - 26960794
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| |||||||  ||| | || ||||| ||||||  ||||||||||||| || | |||||||| |||||||  |||||||||||||||||    
T  26960691 acttgatagaggatatgggtatggaaattgttcgacaggaatcaattaaagagcctggaaaacgcagtaggttgtggtgtcgtgatgatatagttcatgt 26960790  T
Q  102 ttta 105  Q
    ||||    
T  26960791 ttta 26960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 29827555 - 29827682
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||| ||||||||||||||| | || |||||||||||||| |||||||||||| |  | |||||||| ||||   | || ||||||||||| ||    
T  29827555 acttgatagaagacatgggtaaagaaattgtacgacaagaatcaccgaaagagcctggaaagcgtagtaggttgtggttctatgaagatatagttcaagt 29827654  T
Q  102 tttaacagaaaatagtgtgagtaagatt 129  Q
     |||  |||||||   ||||||||||||    
T  29827655 cttagaagaaaattcggtgagtaagatt 29827682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 28141104 - 28141161
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgg 59  Q
    ||||||||||||| |||||||||||| | || |||||||||||||| |||||||||||    
T  28141104 acttgatagaggagatgggtaaagaaattgttcgacaagaatcaccaaaagagcctgg 28141161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 28150741 - 28150798
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgg 59  Q
    |||||||||| ||||||||||||||| | || |||||||||||||| |||||||||||    
T  28150741 acttgatagaagacatgggtaaagaaattgtacgacaagaatcaccaaaagagcctgg 28150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 29469774 - 29469849
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggt 79  Q
    ||||||||||| ||||| |||||| | ||  |||||||||||||| |||| |||||| || | |||||||||||||    
T  29469774 ttgatagaggatatggggaaagaaattgttagacaagaatcacctgaagatcctggaaaacgcagtaggttatggt 29469849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 28097065 - 28097007
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgga 60  Q
    |||||||||| ||||||||||||||| | ||  ||||||||||||| ||||| ||||||    
T  28097065 acttgatagaagacatgggtaaagaaattgtaagacaagaatcaccaaaagaacctgga 28097007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 29842605 - 29842547
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctgga 60  Q
    |||||||||| ||||||||||||||| | || |||| ||||||| | ||||||||||||    
T  29842605 acttgatagaagacatgggtaaagaaattgtacgaccagaatcaacgaaagagcctgga 29842547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 266962 - 266761
Alignment:
Q  5 tgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgtttt 104  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  266962 tgatagaggacatgggtaaagaagtggtccgccaagaatcacctaaagagcctggagaacgaagtaggttatggtgtcaagatgatatagttcatgtttt 266863  T
Q  105 aacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctcata 204  Q
    ||   |||| | ||||||||||||||||||  |  ||||||||||||||||||||||||||||| ||||| |||||||| | |||||||| |||||||||    
T  266862 aaataaaaacactgtgagtaagattgatatcaatgatcaatttgttatttagttttaatacgac-tttgctctttttggacaaaatatgaccatctcata 266764  T
Q  205 cta 207  Q
    |||    
T  266763 cta 266761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 26137448 - 26137571
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||| ||||| |||||| || | |||||||| |||| ||| || ||||||||||||||    
T  26137448 acttgatagaggatatgggtaaagaaattgtccgacaagaatcacccaaagaacctggaaaacgcagtaggttgtggtttcatgaagatatagttcatgt 26137547  T
Q  102 tttaacagaaaatagtgtgagtaa 125  Q
    ||||| ||||||||  ||||||||    
T  26137548 tttaaaagaaaatacagtgagtaa 26137571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 28126300 - 28126200
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||| | |||||||||| |||||||  ||||||||| |||||||||||||||| | |  ||||||||||||||  ||||||||||||||||    
T  28126300 acttgatagaggatacgggtaaagaaatcgtccggaaagaatcacgtaaagagcctggagaacgcaacaggttatggtgtcacaatgatatagttcatgt 28126201  T
Q  102 t 102  Q
    |    
T  28126200 t 28126200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 5922088 - 5921978
Alignment:
Q  5 tgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgtttt 104  Q
    |||||||||||||||| |||||| | ||  ||||||||||||| |||||||||||| |  | |||||||||||||| |  || ||||||||||| |||||    
T  5922088 tgatagaggacatgggaaaagaaattgttagacaagaatcaccgaaagagcctggaaagcgcagtaggttatggtgccctgaagatatagttcaagtttt 5921989  T
Q  105 aacagaaaata 115  Q
    |  ||||||||    
T  5921988 agaagaaaata 5921978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 28132111 - 28132012
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||| ||||  ||||||||| ||||||   |||||||   ||| || ||||||||| | |||||||||||||||||  ||||||||||||||||    
T  28132111 acttgatagaagacacaggtaaagaaatcgtccataaagaatcgtgtaaggaacctggagaacgcagtaggttatggtgtcacaatgatatagttcatgt 28132012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 347 - 551
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  347 actttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaagatgatatagttaatgt 446  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||   |||||||||||||||||||| ||| ||| ||||| |||||||| |||||||||| ||||||    
T  447 tttaaaagaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttgatatgac-tttgctctttttggactaaatatgaccatctc 545  T
Q  202 atacta 207  Q
    ||||||    
T  546 atacta 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 9065 - 9266
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9065 actttatagaggacatgggtaaagaagtcgtacgacaagaatcgcctaaagagccaggagaaagaagtaggttatggtgtcaagatgatatagttaatgt 9164  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||   |||||||||||||||||||| ||| ||| ||||| |||||||| |||||||||| ||||||    
T  9165 tttaaaagaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttgatatgac-tttgctctttttggactaaatatgaccatctc 9263  T
Q  202 ata 204  Q
    |||    
T  9264 ata 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 3319 - 3115
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  3319 acttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggtgtgaagatgatatagttaatgt 3220  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||   |||||||||||||||||||| ||| ||| ||||| |||||||| |||||||||| ||||||    
T  3219 tttaaaagaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttgatatgac-tttgctctttttggactaaatatgaccatctc 3121  T
Q  202 atacta 207  Q
    ||||||    
T  3120 atacta 3115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 12282 - 12078
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  12282 acttgataaaggacatgggtaaagaagtcgtccgacaagaatcgcccaaagagcctggagaaagaagtagattatggtgtgaagatgatatagttaatgt 12183  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctc 201  Q
    ||||| |||||| | |||||||||||||||||| ||   |||||||||||||||||||| ||| ||| ||||| |||||||| |||||||||| ||||||    
T  12182 tttaaaagaaaacactgtgagtaagattgatatctatgttcaatttgttatttagttttgatatgac-tttgctctttttggactaaatatgaccatctc 12084  T
Q  202 atacta 207  Q
    ||||||    
T  12083 atacta 12078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 2155 - 1957
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  2155 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctggagaaagaagtaggttatgctgtcaggatgatatagttcgtgt 2056  T
Q  102 tttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttg-gtctaaatatgatcatct 200  Q
    ||||| |||||| | |||||||||||||||||| ||  |||| ||||||||||||||||||||| || ||||| |||||||   ||||||||||||||||    
T  2055 tttaagagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatacaac-tttgctctttttgtaactaaatatgatcatct 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 29272452 - 29272250
Alignment:
Q  4 ttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgttt 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || || |||||| |||||| |||||    
T  29272452 ttgataggggacatgggtaaagaagtcgtccgacaagaatcaattaaagagcctggagaaagaagtaggttatgctgccaggatgatctagttcgtgttt 29272353  T
Q  104 taacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttagttttaatacgacttttgccctttttggtctaaatatgatcatctcat 203  Q
    ||| |||||| | |||||||||||||||||| ||  |||| |||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||| ||    
T  29272352 taagagaaaacactgtgagtaagattgatatctatgatcattttgttatttagttttaatacgac-tttgctctttttggactaaatattatcatctgat 29272254  T
Q  204 acta 207  Q
    ||||    
T  29272253 acta 29272250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 16371744 - 16371673
Alignment:
Q  8 tagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggt 79  Q
    |||| ||||||||||||||| | ||||||||||||||||| || ||||| || ||| | |||||||||||||    
T  16371744 tagaagacatgggtaaagaaattgtccgacaagaatcaccaaaggagccaggcgaacgtagtaggttatggt 16371673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 17991816 - 17991713
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| | ||||| || |||||| |  |||| |||||||||||    
T  17991816 acttgatagaggacatgggtaaagaaatcgttcggcaagaatcacctaaagagcctggagaacggagtagattgtggtgttataatgacatagttcatgt 17991717  T
Q  102 ttta 105  Q
    ||||    
T  17991716 ttta 17991713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 61131 - 61286
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||||   ||||||||| ||||||| |||||||||| | || | |||||| || | |    
T  61131 aacttgatagagaacatgggtaaagaactcgtccgactagaatcaccttttgagcctggaaaaagaagcaggttatggtttgaaaaggatatatttgaag 61230  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttag 156  Q
    || ||  |||||| | ||||||||||||||||||  |  | |||||||||||||||    
T  61231 ttctagaagaaaacactgtgagtaagattgatatgcaggaacaatttgttatttag 61286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 18075323 - 18075478
Alignment:
Q  1 aacttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatg 100  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||||   ||||||||| ||||||| |||||||||| | || | |||||| || | |    
T  18075323 aacttgatagagaacatgggtaaagaactcgtccgactagaatcaccttttgagcctggaaaaagaagcaggttatggtttgaaaaggatatatttgaag 18075422  T
Q  101 ttttaacagaaaatagtgtgagtaagattgatatataatatcaatttgttatttag 156  Q
    || ||  |||||| | ||||||||||||||||||  |  | |||||||||||||||    
T  18075423 ttctagaagaaaacactgtgagtaagattgatatgcaggaacaatttgttatttag 18075478  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18654098 - 18653995
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||| |||||| ||||||||||||| |||||||  |||||||||||||| |||||| | |  | |||||||| |||||||   |||| ||||||||| |    
T  18654098 acttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacctaaacagcctgaaaagcgtagtaggttgtggtgtcgcaatgacatagttcatat 18653999  T
Q  102 ttta 105  Q
    ||||    
T  18653998 ttta 18653995  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18678178 - 18678075
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||| |||||| ||||||||||||| |||||||  |||||||||| |||||||||| | |  | |||||||| |||||||   |||| ||||||||| |    
T  18678178 acttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctgaaaagcgtagtaggttgtggtgtcgcaatgacatagttcatat 18678079  T
Q  102 ttta 105  Q
    ||||    
T  18678078 ttta 18678075  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18722691 - 18722588
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||| |||||| ||||||||||||| || | ||  ||||||||||||||||||||| | || | ||| |||| |||||||  ||||| ||||||||| |    
T  18722691 acttgctagaggtcatgggtaaagaaatcattcgtaaagaatcacctaaagagcctgaaaaacgtagtcggttgtggtgtcgtgatgacatagttcatat 18722592  T
Q  102 ttta 105  Q
    ||||    
T  18722591 ttta 18722588  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18688235 - 18688179
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctg 58  Q
    ||||| |||||| ||||||||||||| | |||||  |||||||||||||||||||||    
T  18688235 acttgctagaggtcatgggtaaagaaattgtccggaaagaatcacctaaagagcctg 18688179  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18698021 - 18697965
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctg 58  Q
    ||||| |||||| ||||||||||||| |||||||  |||||||||| ||||||||||    
T  18698021 acttgctagaggccatgggtaaagaaatcgtccggaaagaatcacccaaagagcctg 18697965  T

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Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18730116 - 18730060
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctg 58  Q
    ||||| |||||| ||||||||||||| |||||||  |||||||||| ||||||||||    
T  18730116 acttgctagaggtcatgggtaaagaaatcgtccggaaagaatcacccaaagagcctg 18730060  T

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Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 16692427 - 16692550
Alignment:
Q  2 acttgatagaggacatgggtaaagaagtcgtccgacaagaatcacctaaagagcctggagaaagaagtaggttatggtgtcaagatgatatagttcatgt 101  Q
    ||||||| |||||||||||||||||| | |||||| ||||||| || ||| | |||||  || | |||||||| |||| ||| || ||||||||||| ||    
T  16692427 acttgattgaggacatgggtaaagaaattgtccgaaaagaatccccaaaacatcctggtaaacgcagtaggttgtggtttcacgaagatatagttcaagt 16692526  T
Q  102 tttaacagaaaatagtgtgagtaa 125  Q
    ||||  ||||||||  ||||||||    
T  16692527 tttagaagaaaatatggtgagtaa 16692550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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