View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3365_high_96 (Length: 237)
Name: NF3365_high_96
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3365_high_96 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 30129807 - 30129583
Alignment:
| Q |
1 |
catctatttcatttagtttacattaagggtatgtttggtttaatgtttgcaccacaatccggttattcaccatgatttccacaagctacaaggtgtagct |
100 |
Q |
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| T |
30129807 |
catctatttcatttagtttatattaagggtatgtttggtttaatgtttccaccacaatccggttattcaccatgatttccacaagctacaaggtgtagct |
30129708 |
T |
|
| Q |
101 |
tccactttgtcatggtttcctgttgtgattttaagggacgtggaaccaaacatcactatattatttctcgatgaagatccaagtgaatcctacatagtgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
30129707 |
tccactttgtcatggtttcctgttgtgattttaagggacgtggaaccaaacatcgctatattatttctcgatgaagatccaagtgaatccttcatagtgc |
30129608 |
T |
|
| Q |
201 |
acttgtttatattatgagtagtgat |
225 |
Q |
| |
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|||| ||||||||||||| |||||| |
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|
| T |
30129607 |
acttttttatattatgagcagtgat |
30129583 |
T |
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