View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3365_low_3 (Length: 662)

Name: NF3365_low_3
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3365_low_3
NF3365_low_3
[»] chr4 (60 HSPs)
chr4 (7-662)||(40283490-40284155)
chr4 (464-556)||(7949415-7949507)
chr4 (464-582)||(37720175-37720294)
chr4 (472-576)||(19238546-19238651)
chr4 (355-439)||(23494283-23494368)
chr4 (464-554)||(37274420-37274510)
chr4 (472-576)||(55427169-55427274)
chr4 (465-553)||(46295123-46295211)
chr4 (334-416)||(8019718-8019801)
chr4 (387-447)||(48831619-48831683)
chr4 (464-527)||(49938797-49938860)
chr4 (487-576)||(37109335-37109425)
chr4 (464-556)||(8030165-8030257)
chr4 (464-555)||(23377980-23378071)
chr4 (465-556)||(53496900-53496991)
chr4 (382-444)||(25856977-25857038)
chr4 (502-556)||(31759657-31759711)
chr4 (502-556)||(49576893-49576947)
chr4 (464-554)||(51954139-51954229)
chr4 (487-556)||(4249200-4249269)
chr4 (465-538)||(51622526-51622599)
chr4 (472-556)||(13015450-13015534)
chr4 (464-540)||(28635735-28635811)
chr4 (465-576)||(51250484-51250596)
chr4 (627-662)||(2186357-2186392)
chr4 (334-416)||(8020164-8020246)
chr4 (627-662)||(11949787-11949822)
chr4 (627-662)||(19854567-19854602)
chr4 (627-662)||(20383490-20383525)
chr4 (387-434)||(21517384-21517431)
chr4 (387-434)||(21518406-21518453)
chr4 (627-662)||(23247622-23247657)
chr4 (622-661)||(24479337-24479376)
chr4 (465-556)||(31826632-31826723)
chr4 (627-662)||(36478993-36479028)
chr4 (627-662)||(37463524-37463559)
chr4 (472-551)||(46329192-46329271)
chr4 (627-662)||(52270054-52270089)
chr4 (477-556)||(55256173-55256251)
chr4 (352-443)||(56094380-56094470)
chr4 (628-662)||(10204843-10204877)
chr4 (464-498)||(12793872-12793906)
chr4 (486-556)||(19680771-19680841)
chr4 (465-495)||(23491991-23492021)
chr4 (485-554)||(2622377-2622446)
chr4 (412-445)||(24194911-24194944)
chr4 (629-662)||(29350404-29350437)
chr4 (503-556)||(38869791-38869844)
chr4 (472-576)||(39509072-39509177)
chr4 (622-662)||(2580730-2580770)
chr4 (464-527)||(5795369-5795433)
chr4 (627-659)||(9946429-9946461)
chr4 (464-492)||(13483101-13483129)
chr4 (472-556)||(19531971-19532055)
chr4 (472-520)||(22096577-22096625)
chr4 (352-440)||(42679191-42679278)
chr4 (630-662)||(45837143-45837175)
chr4 (472-520)||(49262653-49262701)
chr4 (465-541)||(51969055-51969131)
chr4 (630-662)||(54877623-54877655)
[»] chr5 (52 HSPs)
chr5 (218-446)||(15088954-15089185)
chr5 (330-449)||(12920283-12920400)
chr5 (268-433)||(4241443-4241610)
chr5 (464-557)||(17028225-17028318)
chr5 (464-576)||(8278236-8278349)
chr5 (464-556)||(16773830-16773922)
chr5 (464-576)||(21589290-21589403)
chr5 (464-527)||(17155874-17155937)
chr5 (268-449)||(34367273-34367456)
chr5 (464-554)||(12877718-12877808)
chr5 (464-576)||(30109270-30109382)
chr5 (465-542)||(40461576-40461652)
chr5 (464-556)||(29075804-29075896)
chr5 (268-449)||(4248823-4249003)
chr5 (410-449)||(17053557-17053596)
chr5 (627-662)||(22522825-22522860)
chr5 (472-527)||(24907541-24907596)
chr5 (502-576)||(25627059-25627134)
chr5 (387-445)||(5552605-5552663)
chr5 (336-446)||(40138531-40138643)
chr5 (464-540)||(84863-84939)
chr5 (627-662)||(10199021-10199056)
chr5 (487-554)||(14285186-14285253)
chr5 (502-576)||(26078050-26078125)
chr5 (627-662)||(26409255-26409290)
chr5 (464-539)||(30000156-30000231)
chr5 (464-523)||(35705042-35705101)
chr5 (627-662)||(37932332-37932367)
chr5 (627-661)||(32283581-32283615)
chr5 (219-277)||(34366815-34366873)
chr5 (628-662)||(42505875-42505909)
chr5 (503-540)||(87423-87460)
chr5 (387-440)||(994890-994942)
chr5 (409-446)||(8822504-8822541)
chr5 (472-576)||(16457812-16457917)
chr5 (465-498)||(17877122-17877155)
chr5 (465-538)||(29173531-29173604)
chr5 (487-556)||(34984829-34984898)
chr5 (627-659)||(1488366-1488398)
chr5 (237-277)||(4249315-4249355)
chr5 (235-275)||(10099822-10099862)
chr5 (627-659)||(10704358-10704390)
chr5 (464-540)||(14495766-14495842)
chr5 (630-662)||(16188829-16188861)
chr5 (630-662)||(16188931-16188963)
chr5 (411-443)||(16600580-16600612)
chr5 (465-529)||(19087065-19087129)
chr5 (622-662)||(20927636-20927676)
chr5 (627-659)||(28207134-28207166)
chr5 (627-659)||(32858672-32858704)
chr5 (465-537)||(35360048-35360120)
chr5 (472-540)||(43442235-43442303)
[»] chr1 (66 HSPs)
chr1 (268-447)||(24755022-24755195)
chr1 (347-431)||(42669124-42669209)
chr1 (464-576)||(4280412-4280525)
chr1 (465-576)||(52116743-52116855)
chr1 (465-556)||(27476733-27476824)
chr1 (464-556)||(6122817-6122909)
chr1 (464-556)||(21547441-21547533)
chr1 (464-556)||(24047063-24047155)
chr1 (352-443)||(31165617-31165707)
chr1 (472-581)||(51814491-51814601)
chr1 (357-442)||(15183875-15183959)
chr1 (464-576)||(31794225-31794338)
chr1 (472-572)||(43445969-43446070)
chr1 (464-576)||(44126397-44126510)
chr1 (358-446)||(46798397-46798483)
chr1 (464-556)||(21267954-21268046)
chr1 (472-540)||(24730423-24730491)
chr1 (464-556)||(31383759-31383851)
chr1 (465-576)||(33700735-33700847)
chr1 (472-574)||(4824975-4825077)
chr1 (465-538)||(17297025-17297099)
chr1 (464-550)||(19940833-19940919)
chr1 (464-553)||(24019048-24019138)
chr1 (464-497)||(1094607-1094640)
chr1 (487-556)||(15786304-15786373)
chr1 (464-537)||(21392879-21392952)
chr1 (380-449)||(23532891-23532960)
chr1 (465-554)||(50901607-50901695)
chr1 (380-440)||(51062078-51062139)
chr1 (622-662)||(8253736-8253776)
chr1 (464-556)||(10526846-10526938)
chr1 (487-576)||(21694448-21694535)
chr1 (464-556)||(36124856-36124948)
chr1 (477-553)||(39012317-39012392)
chr1 (352-447)||(52650644-52650740)
chr1 (477-524)||(2537745-2537792)
chr1 (352-443)||(35307251-35307341)
chr1 (464-527)||(36428764-36428827)
chr1 (627-662)||(42045396-42045431)
chr1 (627-662)||(45140030-45140065)
chr1 (467-553)||(952537-952623)
chr1 (487-576)||(9165179-9165269)
chr1 (627-661)||(24752673-24752707)
chr1 (487-540)||(2799901-2799954)
chr1 (502-555)||(3265948-3266001)
chr1 (464-537)||(7219879-7219952)
chr1 (487-556)||(8177166-8177235)
chr1 (464-537)||(12587312-12587384)
chr1 (472-553)||(31605817-31605898)
chr1 (464-576)||(40257401-40257514)
chr1 (472-549)||(45266864-45266941)
chr1 (627-659)||(2613724-2613756)
chr1 (630-662)||(3509965-3509997)
chr1 (627-659)||(14520946-14520978)
chr1 (627-659)||(17188695-17188727)
chr1 (627-659)||(24162789-24162821)
chr1 (627-659)||(25086485-25086517)
chr1 (630-662)||(26803475-26803507)
chr1 (411-443)||(27458299-27458331)
chr1 (502-542)||(38947471-38947511)
chr1 (627-659)||(40227831-40227863)
chr1 (627-659)||(42888577-42888609)
chr1 (465-537)||(44961807-44961879)
chr1 (390-449)||(47763239-47763299)
chr1 (627-659)||(48100724-48100756)
chr1 (464-556)||(52336735-52336827)
[»] chr7 (58 HSPs)
chr7 (464-576)||(41487364-41487474)
chr7 (464-577)||(29385704-29385818)
chr7 (464-576)||(30579337-30579450)
chr7 (464-576)||(43590909-43591022)
chr7 (464-576)||(2446310-2446423)
chr7 (464-576)||(20335792-20335905)
chr7 (464-576)||(23301563-23301676)
chr7 (472-556)||(18056744-18056828)
chr7 (465-576)||(22932674-22932785)
chr7 (465-576)||(31835194-31835306)
chr7 (464-527)||(21558180-21558243)
chr7 (217-291)||(25576296-25576370)
chr7 (487-576)||(26459394-26459484)
chr7 (467-576)||(38374563-38374673)
chr7 (472-576)||(15137555-15137660)
chr7 (473-553)||(5579204-5579284)
chr7 (464-556)||(41519226-41519317)
chr7 (472-540)||(42711997-42712065)
chr7 (465-576)||(48771940-48772052)
chr7 (406-449)||(30738482-30738525)
chr7 (334-449)||(43230753-43230863)
chr7 (475-576)||(22760865-22760967)
chr7 (410-444)||(33763127-33763161)
chr7 (465-578)||(44628146-44628259)
chr7 (477-576)||(6426023-6426126)
chr7 (627-659)||(580953-580985)
chr7 (465-576)||(5273552-5273664)
chr7 (464-556)||(11720921-11721013)
chr7 (465-572)||(19553460-19553567)
chr7 (465-576)||(24513799-24513911)
chr7 (622-662)||(42043090-42043130)
chr7 (627-662)||(5526727-5526762)
chr7 (627-662)||(10244729-10244764)
chr7 (502-541)||(18363734-18363773)
chr7 (465-556)||(21877831-21877922)
chr7 (627-662)||(38841989-38842024)
chr7 (627-662)||(39801708-39801743)
chr7 (627-662)||(48980489-48980524)
chr7 (465-555)||(279916-280005)
chr7 (464-546)||(7309389-7309470)
chr7 (472-554)||(11700190-11700271)
chr7 (627-661)||(20243257-20243291)
chr7 (464-542)||(27313695-27313773)
chr7 (502-556)||(43215207-43215261)
chr7 (477-538)||(2882991-2883052)
chr7 (465-526)||(20468286-20468347)
chr7 (390-443)||(30053934-30053986)
chr7 (358-443)||(33407136-33407220)
chr7 (382-443)||(34595923-34595983)
chr7 (472-524)||(4566398-4566449)
chr7 (622-662)||(8615020-8615060)
chr7 (472-540)||(9183160-9183228)
chr7 (464-556)||(15905635-15905726)
chr7 (627-659)||(19416516-19416548)
chr7 (296-368)||(25576135-25576207)
chr7 (627-659)||(38728210-38728242)
chr7 (630-662)||(43346588-43346620)
chr7 (465-525)||(48983695-48983755)
[»] chr2 (46 HSPs)
chr2 (262-449)||(11862106-11862297)
chr2 (472-576)||(23052492-23052597)
chr2 (468-556)||(11251110-11251198)
chr2 (464-576)||(37480077-37480190)
chr2 (472-576)||(42327364-42327469)
chr2 (465-576)||(19016033-19016145)
chr2 (468-576)||(29197341-29197450)
chr2 (464-576)||(42602556-42602669)
chr2 (502-576)||(11062362-11062437)
chr2 (358-431)||(25319118-25319191)
chr2 (464-576)||(1435066-1435178)
chr2 (472-576)||(39714994-39715099)
chr2 (464-553)||(12517715-12517803)
chr2 (464-576)||(29503273-29503385)
chr2 (464-556)||(21213792-21213884)
chr2 (352-430)||(35436210-35436287)
chr2 (465-556)||(12086091-12086182)
chr2 (465-575)||(33962746-33962857)
chr2 (382-443)||(83570-83630)
chr2 (487-556)||(1729839-1729908)
chr2 (464-576)||(26482095-26482207)
chr2 (481-576)||(16525180-16525275)
chr2 (472-556)||(19244132-19244216)
chr2 (464-540)||(25637190-25637266)
chr2 (627-662)||(4056792-4056827)
chr2 (409-440)||(7889403-7889434)
chr2 (627-662)||(9383233-9383268)
chr2 (465-556)||(21195638-21195729)
chr2 (627-662)||(44526130-44526165)
chr2 (628-662)||(7350549-7350583)
chr2 (464-581)||(7798997-7799114)
chr2 (387-445)||(10019620-10019678)
chr2 (370-443)||(18077363-18077437)
chr2 (464-538)||(41908599-41908673)
chr2 (502-555)||(4262301-4262354)
chr2 (387-444)||(33428792-33428848)
chr2 (388-445)||(35716645-35716702)
chr2 (466-523)||(37971951-37972008)
chr2 (464-497)||(41390305-41390338)
chr2 (627-660)||(43043191-43043224)
chr2 (630-662)||(4509542-4509574)
chr2 (387-443)||(7401067-7401123)
chr2 (472-524)||(12632773-12632825)
chr2 (630-662)||(25598586-25598618)
chr2 (465-553)||(26276381-26276469)
chr2 (622-662)||(33832693-33832733)
[»] chr8 (44 HSPs)
chr8 (464-576)||(16852342-16852455)
chr8 (464-576)||(28783062-28783175)
chr8 (295-449)||(4187205-4187360)
chr8 (352-445)||(1228941-1229035)
chr8 (464-554)||(44780075-44780165)
chr8 (468-576)||(19703452-19703561)
chr8 (472-576)||(29858018-29858123)
chr8 (465-576)||(968364-968476)
chr8 (464-556)||(6536543-6536635)
chr8 (472-576)||(2203494-2203599)
chr8 (358-442)||(9550693-9550777)
chr8 (464-576)||(18540300-18540413)
chr8 (464-576)||(29431013-29431126)
chr8 (464-576)||(31088678-31088788)
chr8 (464-556)||(11819799-11819891)
chr8 (337-443)||(35749059-35749165)
chr8 (464-538)||(11793482-11793556)
chr8 (465-576)||(40591734-40591843)
chr8 (472-576)||(3624582-3624686)
chr8 (472-576)||(23361618-23361723)
chr8 (464-556)||(3058011-3058102)
chr8 (465-576)||(23874345-23874456)
chr8 (464-556)||(34966811-34966903)
chr8 (465-576)||(43968960-43969072)
chr8 (480-537)||(18897208-18897265)
chr8 (503-556)||(27750753-27750806)
chr8 (340-416)||(28451913-28451990)
chr8 (390-443)||(29029115-29029168)
chr8 (465-576)||(26688867-26688979)
chr8 (480-536)||(28787473-28787529)
chr8 (622-662)||(30427728-30427768)
chr8 (465-536)||(10287518-10287589)
chr8 (465-536)||(11979295-11979366)
chr8 (466-540)||(3305151-3305225)
chr8 (465-523)||(36034483-36034541)
chr8 (464-497)||(8485081-8485114)
chr8 (627-660)||(19163562-19163595)
chr8 (370-443)||(32350818-32350890)
chr8 (370-443)||(32367479-32367551)
chr8 (477-558)||(40136938-40137017)
chr8 (464-556)||(16843756-16843847)
chr8 (387-443)||(26600870-26600925)
chr8 (487-555)||(33017238-33017306)
chr8 (465-497)||(40872958-40872990)
[»] chr3 (60 HSPs)
chr3 (464-556)||(14339633-14339725)
chr3 (274-445)||(10856309-10856473)
chr3 (464-576)||(47810706-47810818)
chr3 (487-576)||(27093345-27093435)
chr3 (464-538)||(44069799-44069873)
chr3 (464-553)||(54990728-54990817)
chr3 (387-449)||(17549876-17549939)
chr3 (464-554)||(10445100-10445190)
chr3 (387-449)||(29491090-29491152)
chr3 (464-557)||(8853760-8853853)
chr3 (464-556)||(8075088-8075180)
chr3 (464-540)||(52769944-52770020)
chr3 (502-576)||(46518630-46518705)
chr3 (380-438)||(30676359-30676417)
chr3 (464-556)||(8170695-8170787)
chr3 (465-526)||(17035039-17035100)
chr3 (487-540)||(30311345-30311398)
chr3 (465-576)||(4222143-4222255)
chr3 (468-556)||(32651403-32651491)
chr3 (472-540)||(33899653-33899721)
chr3 (627-662)||(10498719-10498754)
chr3 (465-540)||(11612338-11612413)
chr3 (467-538)||(19716238-19716309)
chr3 (410-449)||(20524581-20524620)
chr3 (627-662)||(24428497-24428532)
chr3 (627-662)||(29631188-29631223)
chr3 (627-662)||(53996301-53996336)
chr3 (482-528)||(353136-353182)
chr3 (628-662)||(977965-977999)
chr3 (502-540)||(17108897-17108935)
chr3 (468-581)||(26871469-26871583)
chr3 (632-662)||(39779031-39779061)
chr3 (627-661)||(47313397-47313431)
chr3 (330-439)||(49292115-49292224)
chr3 (464-542)||(49397502-49397580)
chr3 (464-576)||(8051216-8051329)
chr3 (621-662)||(9321429-9321470)
chr3 (502-555)||(27259185-27259238)
chr3 (382-449)||(33282675-33282739)
chr3 (467-556)||(47236935-47237024)
chr3 (627-660)||(50037313-50037346)
chr3 (464-556)||(2667885-2667977)
chr3 (464-540)||(4844472-4844548)
chr3 (464-540)||(4870168-4870244)
chr3 (478-538)||(14186688-14186748)
chr3 (627-659)||(14827527-14827559)
chr3 (464-524)||(15034399-15034459)
chr3 (465-576)||(15048023-15048135)
chr3 (622-662)||(19468448-19468488)
chr3 (627-659)||(21506785-21506817)
chr3 (627-659)||(25340951-25340983)
chr3 (630-662)||(25441524-25441556)
chr3 (465-549)||(30715772-30715855)
chr3 (627-659)||(32629082-32629114)
chr3 (627-659)||(32836175-32836207)
chr3 (465-576)||(36720383-36720495)
chr3 (627-659)||(39481143-39481175)
chr3 (472-524)||(40777067-40777119)
chr3 (627-659)||(44579638-44579670)
chr3 (464-556)||(51903839-51903931)
[»] scaffold0258 (1 HSPs)
scaffold0258 (464-576)||(15284-15397)
[»] chr6 (27 HSPs)
chr6 (370-443)||(18130600-18130673)
chr6 (464-576)||(21418472-21418585)
chr6 (370-444)||(23888264-23888338)
chr6 (465-576)||(33549106-33549218)
chr6 (478-576)||(14278086-14278184)
chr6 (464-557)||(11103396-11103489)
chr6 (464-576)||(24641151-24641264)
chr6 (503-574)||(10338174-10338246)
chr6 (464-556)||(31622952-31623044)
chr6 (352-443)||(11751788-11751878)
chr6 (477-553)||(20863401-20863477)
chr6 (465-556)||(6385885-6385976)
chr6 (465-520)||(13441116-13441171)
chr6 (627-662)||(20744140-20744175)
chr6 (627-662)||(32053790-32053825)
chr6 (464-550)||(20213070-20213156)
chr6 (464-550)||(22107093-22107179)
chr6 (467-576)||(30127402-30127512)
chr6 (630-659)||(5172125-5172154)
chr6 (464-576)||(6758383-6758496)
chr6 (465-557)||(13661542-13661635)
chr6 (464-541)||(18562599-18562676)
chr6 (622-662)||(361751-361791)
chr6 (627-659)||(4494898-4494930)
chr6 (464-496)||(18263923-18263955)
chr6 (465-576)||(24333987-24334099)
chr6 (627-659)||(26320590-26320622)
[»] scaffold0172 (1 HSPs)
scaffold0172 (465-556)||(15739-15830)
[»] scaffold0115 (1 HSPs)
scaffold0115 (464-527)||(42625-42688)
[»] scaffold0001 (1 HSPs)
scaffold0001 (352-443)||(508077-508167)
[»] scaffold0100 (1 HSPs)
scaffold0100 (387-445)||(39338-39396)
[»] scaffold1149 (1 HSPs)
scaffold1149 (627-662)||(2334-2369)
[»] scaffold0118 (1 HSPs)
scaffold0118 (627-662)||(40000-40035)
[»] scaffold0211 (1 HSPs)
scaffold0211 (464-576)||(24055-24168)
[»] scaffold0735 (1 HSPs)
scaffold0735 (627-659)||(1530-1562)
[»] scaffold0259 (1 HSPs)
scaffold0259 (631-659)||(5419-5447)
[»] scaffold0126 (1 HSPs)
scaffold0126 (504-556)||(25348-25400)
[»] scaffold0101 (1 HSPs)
scaffold0101 (468-571)||(43297-43401)
[»] scaffold0031 (1 HSPs)
scaffold0031 (627-659)||(47268-47300)
[»] scaffold0011 (1 HSPs)
scaffold0011 (627-659)||(185265-185297)
[»] scaffold0006 (1 HSPs)
scaffold0006 (464-540)||(18338-18413)


Alignment Details
Target: chr4 (Bit Score: 552; Significance: 0; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 552; E-Value: 0
Query Start/End: Original strand, 7 - 662
Target Start/End: Original strand, 40283490 - 40284155
Alignment:
Q  7 agcagaacctgtgaaaataaggtttacaaagagaatgtatatcaaaagctaaaaggactagactactaacttatacatataaaagggccaacaacctaag 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40283490 agcataacatgtgaaaataaggtttacaaagagaatgtatatcaaaagctaaaaggactagactactaacttataaatataaaagggccaacaacctaag 40283589  T
Q  107 tgcaatagcatattatctaacacctcccttcaaactcccgatgtatcaataggaatcatcgagagtatgtcaatctacaagcgaaaatgtgctcaatagt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283590 tgcaatagcatattatctaacacctcccttcaaactcccgatgtatcaataggaatcatcgagagtatgtcaatctacaagcgaaaatgtgctcaatagt 40283689  T
Q  207 aaataacataccaaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaa 306  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283690 aaataacataccaaatgcatcctaggtttctttaagtttgacgtttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaa 40283789  T
Q  307 cgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaagg 406  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283790 cgagttagtcctttatttttattttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaagg 40283889  T
Q  407 tccaaaaagtgtttatgacaccaaacatgattacttacatacannnnnnnnnnnnnngaagaagttaaattagcccacctaaattggcaccaagcagaat 506  Q
    |||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||||    
T  40283890 tccaaaaagtgtttatgacaccaaacatgattacttacatacattttttttgtttttgaagaagttaaattagcccacctaaattggcaccaagcagaat 40283989  T
Q  507 caaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtgggatttacttacatacatgttcttattgttg 605  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40283990 caaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtgggatttacttacatacatgttcttattgttg 40284089  T
Q  606 tttaataaatgaccaatttga---------gagcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||    
T  40284090 tttaataaatgaccaatttgaaatcctcttgagcttagctcggttggtatggacaatgcataatat 40284155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 7949415 - 7949507
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||||||||||| |||||   |||||| |||||||||||||||||||  ||||||||| | | |||||||||||||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 7949507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 464 - 582
Target Start/End: Original strand, 37720175 - 37720294
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat-acatcatg 562  Q
    ||||||| |||||||||||||||||||||   ||  | |||||| |||||| ||||||||||||  ||||||||||| | ||||||||||| ||| || |    
T  37720175 gaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccagg 37720274  T
Q  563 ccaacccaagtgggatttac 582  Q
    |||||||||||||| |||||    
T  37720275 ccaacccaagtgggttttac 37720294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 19238546 - 19238651
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| ||||||| |||  | |||||| |||| ||||||| ||||||  ||||||||||||| |||||||||||| || || |||||||||    
T  19238546 taaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 19238645  T
Q  571 agtggg 576  Q
    ||||||    
T  19238646 agtggg 19238651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 23494368 - 23494283
Alignment:
Q  355 atccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgatta 439  Q
    |||||||||||||| |||||||||| |||||  |||||||| |||||||||| |||||||| |||||||| ||| |||||||||||    
T  23494368 atccaactttgttaaaaagtgcttacatgactatttaacatcgaggtggaagatccaaaaaatgtttatggcacgaaacatgatta 23494283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 37274420 - 37274510
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||| ||||||||||||| |||||| ||||||   |||||| ||||| |||||||||||||  ||||||||||| | |||||||||||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 55427169 - 55427274
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| |||||||||||  | |||||| |||||||||||| ||| ||  ||| ||||||| | |||||||||||| || || |||||||||    
T  55427169 taaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaaccca 55427268  T
Q  571 agtggg 576  Q
    ||||||    
T  55427269 agtggg 55427274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 46295211 - 46295123
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    |||||| |||| ||||||||| |||||||||||  | |||||| |||||||||||||||||||  ||||||||| | | ||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 8019801 - 8019718
Alignment:
Q  334 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 416  Q
    ||||||||||||  ||| ||||| ||||||||||| |||||| ||| |||| |||||||||||||| ||||| |||||||||||    
T  8019801 aacaaattgatccattttttcattcaactttgttaaaaagtgtttacatgatcttttaacattgagttggaacgtccaaaaagt 8019718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 48831619 - 48831683
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgt----ttatgacaccaaacatgattacttacata 447  Q
    ||||||||||||||| ||||||||||||||||    |||||| ||||||||||||||||||||||    
T  48831619 tttaacattgaggtgaaaggtccaaaaagtgtttaattatgataccaaacatgattacttacata 48831683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 49938797 - 49938860
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    ||||||| ||||||| ||||||||||||||||| | | |||||||||||| |||||||||||||    
T  49938797 gaagaagctaaattaacccacctaaattggcactaggaagaatcaaacctaagaccttgaggag 49938860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 576
Target Start/End: Original strand, 37109335 - 37109425
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||||   |||||| |||||||||||||||||||  ||||||||||| | |||||||||||| ||  | |||||||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 37109425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 8030165 - 8030257
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| ||| |||||||||||||||  ||||||||||||| |||||||| ||||    
T  8030165 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctatac 8030257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 555
Target Start/End: Complemental strand, 23378071 - 23377980
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    ||||||| |||| |||||| |  |||||||||| |   |||||| |||||||||||||||||||  ||||||||||| | ||||||||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 556
Target Start/End: Complemental strand, 53496991 - 53496900
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||||| ||| | |||||||| |||   ||||||||| ||||||| ||||||||  ||||||||||| | ||||| |||||||    
T  53496991 aagaagttaaattagtccaaccaaattggctccagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatac 53496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 444
Target Start/End: Original strand, 25856977 - 25857038
Alignment:
Q  382 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 444  Q
    |||| |||||||||||||||| || |||||||| ||||||||||| |||||||||||| ||||    
T  25856977 gaccatttaacattgaggtggtagatccaaaaa-tgtttatgacatcaaacatgattatttac 25857038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 556
Target Start/End: Original strand, 31759657 - 31759711
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| || ||||||||||||||||  ||||||||||||| |||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaatac 31759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 556
Target Start/End: Original strand, 49576893 - 49576947
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||||||||  ||||||||||||| || ||||||||||    
T  49576893 agaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatac 49576947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 51954229 - 51954139
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||| |||||||||||||| |||||| ||||    | ||||||||||||||||| ||||||  ||| ||||||||| |||||| ||||    
T  51954229 gaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaat 51954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 4249269 - 4249200
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||   ||||||||||||||||||||||||||  ||||||||| ||  |||||||| ||||    
T  4249269 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctatac 4249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 51622599 - 51622526
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    |||||| |||||| ||||||| ||||||||||||   ||| || |||||||||||||||||||  |||||||||    
T  51622599 aagaagctaaattggcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 556
Target Start/End: Complemental strand, 13015534 - 13015450
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||| ||||    |||||| ||| |||||| | ||||||  ||||||||||||| |||||||||||||    
T  13015534 taaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatac 13015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 28635811 - 28635735
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||||||||||||| ||||||||||||   |||||| ||||| ||||||  |||||  |||||||||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactccca 28635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 51250484 - 51250596
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||||||||| |||||||||||     ||||| ||| ||||| ||||||| |  |||||||||||   |||||||||||| || || ||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  51250584 caacccaagtggg 51250596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 2186392 - 2186357
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  2186392 gagcttagctcagttggtatggacaatgcataatat 2186357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 8020246 - 8020164
Alignment:
Q  334 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 416  Q
    ||||||||||||  ||| ||||| ||||||||||| |||||| ||| |||| |||||||||||||| | ||| |||||||||||    
T  8020246 aacaaattgatcatttt-ttcattcaactttgttaaaaagtgtttacatgatcttttaacattgagttagaacgtccaaaaagt 8020164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 11949822 - 11949787
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11949822 gagcttagctcagttggtatggacaatgcataatat 11949787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 19854567 - 19854602
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19854567 gagcttagctcagttggtatggacaatgcataatat 19854602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 20383490 - 20383525
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20383490 gagcttagctcagttggtatggacaatgcataatat 20383525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 21517384 - 21517431
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacat 434  Q
    |||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  21517384 tttaccattgaggtagaaggttcaacaagtgtttatgacaccaaacat 21517431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 434
Target Start/End: Original strand, 21518406 - 21518453
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacat 434  Q
    |||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  21518406 tttaccattgaggtagaaggttcaacaagtgtttatgacaccaaacat 21518453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 23247657 - 23247622
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||||||||||||||||||| |||||||||    
T  23247657 gagcttagctcggttggtatggacaacgcataatat 23247622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 661
Target Start/End: Complemental strand, 24479376 - 24479337
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataata 661  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  24479376 tttgtgagcttagctcagttggtatggacaatgcataata 24479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 556
Target Start/End: Complemental strand, 31826723 - 31826632
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||| |||||| ||| ||   ||||| ||| |||||||||||||||  |||||||| |||  |||||||| ||||    
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctatac 31826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 36478993 - 36479028
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36478993 gagcttagctctgttggtatggacaatgcataatat 36479028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 37463524 - 37463559
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37463524 gagcttagctcggttggtatgaacaatgcataatat 37463559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 551
Target Start/End: Complemental strand, 46329271 - 46329192
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagcc 551  Q
    |||||||||  ||| |||||||||||  | |||||| ||||||| |||||||||||  ||||||||||| | ||||||||    
T  46329271 taaattagcttacccaaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 52270089 - 52270054
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  52270089 gagcttagctcagttggtatggacaatgcataatat 52270054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 556
Target Start/End: Original strand, 55256173 - 55256251
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||| ||||||||||| || |||||| |||||||| |||||||| || ||||||||| | | | |||||||||||    
T  55256173 tagcccaccaaaattggcaccgaggagaatcgaacctgaggccttgagg-gaagcacactccaatgtcacaagccaatac 55256251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 443
Target Start/End: Complemental strand, 56094470 - 56094380
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| |||||||  ||| || |||||||  |||| ||||||||| || ||| |||| ||||| |||||||||||| ||||||||||||||||    
T  56094470 ttcagccaacttcattaaaatgtgcttatagaccatttaacattaagatggtaggttcaaaa-gtgtttatgacatcaaacatgattactta 56094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 662
Target Start/End: Original strand, 10204843 - 10204877
Alignment:
Q  628 agcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||| ||||||||||||||||||||||||    
T  10204843 agcttagctcagttggtatggacaatgcataatat 10204877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 12793872 - 12793906
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcacca 498  Q
    ||||||| |||||||||||||||||||||||||||    
T  12793872 gaagaagctaaattagcccacctaaattggcacca 12793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 556
Target Start/End: Original strand, 19680771 - 19680841
Alignment:
Q  486 taaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||||   |||||| ||||| ||||||||||||   ||||||||||||| ||||||| |||||    
T  19680771 taaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaatac 19680841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 23491991 - 23492021
Alignment:
Q  465 aagaagttaaattagcccacctaaattggca 495  Q
    |||||||||||||||||||||||||||||||    
T  23491991 aagaagttaaattagcccacctaaattggca 23492021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 2622377 - 2622446
Alignment:
Q  485 ctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||||||||||   |||||| |||||||||| | ||||||  ||||||||||| | |||||||||||    
T  2622377 ctaaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 24194911 - 24194944
Alignment:
Q  412 aaagtgtttatgacaccaaacatgattacttaca 445  Q
    ||||||||||||||| ||||||||||||||||||    
T  24194911 aaagtgtttatgacatcaaacatgattacttaca 24194944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 629 - 662
Target Start/End: Complemental strand, 29350437 - 29350404
Alignment:
Q  629 gcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||||||||||||||||||| |||||||    
T  29350437 gcttagctcggttggtatggacaatgtataatat 29350404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 556
Target Start/End: Complemental strand, 38869844 - 38869791
Alignment:
Q  503 gaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||| |||||||||||||||||||  |||||||||||   |||||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 38869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 39509177 - 39509072
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    ||||||| ||||||||||||| |||   | |||||| |||||||||||| ||||||  |||||||||||   ||||||||| || ||| |  ||||||||    
T  39509177 taaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaaccca 39509078  T
Q  571 agtggg 576  Q
    ||||||    
T  39509077 agtggg 39509072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 2580730 - 2580770
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  2580730 tttgtgagcttagctcagttggtatggacaatgcgtaatat 2580770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 5795369 - 5795433
Alignment:
Q  464 gaagaagttaaattagccc-acctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    ||||||| |||| |||||| ||| ||||||||||   | ||||||||||||||||||||||||||    
T  5795369 gaagaagctaaactagccccacccaaattggcactggggagaatcaaacctgagaccttgaggag 5795433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 9946429 - 9946461
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  9946429 gagcttagctcagttggtatggacaatgcataa 9946461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 492
Target Start/End: Complemental strand, 13483129 - 13483101
Alignment:
Q  464 gaagaagttaaattagcccacctaaattg 492  Q
    |||||||||||||||||||||||||||||    
T  13483129 gaagaagttaaattagcccacctaaattg 13483101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 556
Target Start/End: Original strand, 19531971 - 19532055
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||||||||||||||| ||   |||||| ||||||| | ||| |||||  |||| |||| | | |||||||||||||    
T  19531971 taaattagcccacctaaattggcatcagagagaatcgaacctgaaaacttaaggaggagcacgctcctatgtcccaagccaatac 19532055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 520
Target Start/End: Original strand, 22096577 - 22096625
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 520  Q
    ||||||||||||| ||||||||||| | | |||||| ||||||||||||    
T  22096577 taaattagcccacttaaattggcactagggagaatcgaacctgagacct 22096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 440
Target Start/End: Original strand, 42679191 - 42679278
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattac 440  Q
    |||| ||||||| |||| |||||| |||  |||| ||||||||| || | | |||||||||| |||||||| ||| |||||||||||||    
T  42679191 ttcagccaacttcgttaaaaagtgtttatagaccatttaacattaagatagtaggtccaaaa-gtgtttataacatcaaacatgattac 42679278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 45837175 - 45837143
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  45837175 cttagctcagttggtatggacaatgcataatat 45837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 520
Target Start/End: Original strand, 49262653 - 49262701
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 520  Q
    |||||||||||||||||||||||||   | |||||| ||||||||||||    
T  49262653 taaattagcccacctaaattggcactggggagaatcgaacctgagacct 49262701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 51969131 - 51969055
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaa 541  Q
    ||||||||||||||| ||| | ||||||||||||   ||||   ||||||| |||||||||||  ||||||||||||    
T  51969131 aagaagttaaattagtccatccaaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacactcccaa 51969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 54877655 - 54877623
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||||||||||| ||||||||||||||    
T  54877655 cttagctcggttggtatgaacaatgcataatat 54877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 4e-40; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 218 - 446
Target Start/End: Original strand, 15088954 - 15089185
Alignment:
Q  218 caaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagttttaaattggtcctttaggtcgtaaaagtgaacgagttagtcc 317  Q
    |||||||||||  || | |||||||||| |||||| |||| |||||| ||||||||||| ||||||||||||||  | |||||||||| | |||||||||    
T  15088954 caaatgcatcccggggtcctttaagtttgacgtttctatcagattagcccttttagtttcaaattggtcctttatttagtaaaagtgagcaagttagtcc 15089053  T
Q  318 ttcatttttatc--ttgcaacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaa 414  Q
    || | |||| |   ||  ||||||||| || || | |||||||| |||||||| ||||  |||| |||||| ||||||||||||||||||||||||||||    
T  15089054 ttaactttttttgtttataacaaattggtccctcttttcatccagctttgttaaaaagcacttacatgaccatttaacattgaggtggaaggtccaaaaa 15089153  T
Q  415 gtgtttatgacaccaaacatgattacttacat 446  Q
    | ||||||||||| ||| ||||||||||||||    
T  15089154 gcgtttatgacactaaatatgattacttacat 15089185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 12920283 - 12920400
Alignment:
Q  330 ttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacacca 429  Q
    ||||||||||||||| | |||  | |||||||||||||| |||||| |||| |||| ||||||||||||||  |||||||||||||| |||||||  |||    
T  12920283 ttgcaacaaattgattttttttct-atccaactttgttaaaaagtg-ttaaagaccatttaacattgaggtaaaaggtccaaaaagtctttatgatgcca 12920380  T
Q  430 aacatgattacttacataca 449  Q
    ||||||||||||||||||||    
T  12920381 aacatgattacttacataca 12920400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 268 - 433
Target Start/End: Original strand, 4241443 - 4241610
Alignment:
Q  268 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 366  Q
    |||| |||||||||| |||||||| ||| ||| |||||| |  |||||||||| | || | | ||| ||||||||||||  ||| ||||| |||||||||    
T  4241443 tttttgttttaaattagtcctttatgtcagtacaagtgagcatgttagtcctttaattattttttgtaacaaattgatccattttttcatacaactttgt 4241542  T
Q  367 tataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaaca 433  Q
    || ||||| |||| |||||| |||||||||||||| ||| |||||||||||||||  |||| ||||||    
T  4241543 taaaaagttcttacatgaccatttaacattgaggtcgaatgtccaaaaagtgtttccgacatcaaaca 4241610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 17028225 - 17028318
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaataca 557  Q
    ||||||| ||||||||||||||||||||| ||| |    |||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaataca 17028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 8278236 - 8278349
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||||||||||||||| ||||||    | |||||||| ||||| || ||||||  ||||||||||||| |||||||||||| |||||      
T  8278236 gaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 8278335  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  8278336 ccaacccaagtggg 8278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 16773922 - 16773830
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||||||||||||| ||   |||||| |||||||||||| ||||||  ||||||||||| | |||||| ||||||    
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 16773830  T

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Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 21589403 - 21589290
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||| ||||||||||||||||||||||    ||||| |||||||||| | ||||||  ||| ||||||| | |||||||||||| || || |    
T  21589403 gaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccagg 21589304  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  21589303 ccaacccaagtggg 21589290  T

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Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 17155937 - 17155874
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    |||||||||||||||||||||  ||||||||| ||   ||||||||||||||||||||||||||    
T  17155937 gaagaagttaaattagcccactcaaattggcagcacagagaatcaaacctgagaccttgaggag 17155874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 268 - 449
Target Start/End: Complemental strand, 34367456 - 34367273
Alignment:
Q  268 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcattt--ttatcttgcaacaaattgatctctttcttcatccaacttt 364  Q
    ||||||||| |||| ||||||||| ||| ||||| ||||||  |||||||||| | ||  || | ||| |||||||| ||   ||| ||||| |||||||    
T  34367456 ttttagtttcaaataggtcctttatgtcagtaaatgtgaacaggttagtcctttaattattttttttgtaacaaattcatacattttttcatacaacttt 34367357  T
Q  365 gttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||| |||||||||| |||||  | ||| |||||||||||| ||||||||| ||||  ||| ||||||||| |||||||| |||||    
T  34367356 gttaaaaagtgcttacatgactatgtaaaattgaggtggaatgtccaaaaaatgtt--tgagaccaaacataattacttatataca 34367273  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 12877808 - 12877718
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||| |||||||||||||||||||| | ||||   |||||| |||||||||| |||||||||  |||||||||||  ||||| |||||    
T  12877808 gaagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaat 12877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 30109270 - 30109382
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||||||||| |||||  |  ||||| ||||||||||||  |||||  ||||||||||| | | |||||||||| || || |    
T  30109270 gaagaagctaaattagcccacctaaattagcacc-gggggaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaag 30109368  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  30109369 ccaacccaagtggg 30109382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 542
Target Start/End: Original strand, 40461576 - 40461652
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaag 542  Q
    |||||||||||||||||||| |||||| ||| || | || ||| |||||||||||||||||||| |||||||| ||||    
T  40461576 aagaagttaaattagcccacttaaatttgcatcagg-aggatctaacctgagaccttgaggagaagcacactctcaag 40461652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 29075896 - 29075804
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||| ||||||||||||||   |||||| ||| ||||| || ||||||  |||||||||||   |||||||||||||    
T  29075896 gaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaatac 29075804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 268 - 449
Target Start/End: Original strand, 4248823 - 4249003
Alignment:
Q  268 ttttagttttaaattggtcctttaggtcg-taaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 366  Q
    |||||||||||||||| || |||| |||| ||||||| ||| ||||||||||| | ||   | ||| ||||||||||||| ||| ||||| |||||||||    
T  4248823 ttttagttttaaattgatcttttatgtcggtaaaagtaaacaagttagtcctttaattaatttttgtaacaaattgatctattt-ttcatacaactttgt 4248921  T
Q  367 tataaag----tgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    || |||     |||||| |||||| ||||||| |||      | ||||||||||||||||||||||||||||| |||| ||| |||||    
T  4248922 taaaaaaacattgcttacatgaccatttaacactga------atgtccaaaaagtgtttatgacaccaaacataattatttatataca 4249003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 449
Target Start/End: Original strand, 17053557 - 17053596
Alignment:
Q  410 aaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  17053557 aaaaagtgtttatgacacaaaacatgattacttacataca 17053596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 22522860 - 22522825
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||||||||||||||||||||||||||||    
T  22522860 gagcttagctcggttggtatggacaatgcataatat 22522825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 24907596 - 24907541
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    |||||||||||||||||||||||| |||| | |||| ||||||||| |||||||||    
T  24907596 taaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgaggag 24907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 25627134 - 25627059
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    |||||| |||||||||||||||||||  |||||||||||||  ||||||||||| ||  | |||||||||||||||    
T  25627134 agaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtggg 25627059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 5552663 - 5552605
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
    |||||||||||||| | | ||| ||||||||||||||||| |||||||||||| |||||    
T  5552663 tttaacattgaggttgcatgtctaaaaagtgtttatgacaacaaacatgattaattaca 5552605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 446
Target Start/End: Complemental strand, 40138643 - 40138531
Alignment:
Q  336 caaattgatctctttcttcatccaactttgttataaa--gtg-cttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaac 432  Q
    |||||||||| |||| ||||| ||||||||||| |||  ||| || ||||| | ||||||||||||||||||| |  ||||| |||||||||||| ||||    
T  40138643 caaattgatc-cttttttcattcaactttgttaaaaaaagtgtctaaatgatcatttaacattgaggtggaagatttaaaaattgtttatgacacaaaac 40138545  T
Q  433 atgattacttacat 446  Q
    | |||||| |||||    
T  40138544 acgattacatacat 40138531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 84939 - 84863
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||||||||||||| | | |||||||  | |||||| ||| |||||||||||||||  |||||||||||    
T  84939 gaagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactccca 84863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 10199021 - 10199056
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10199021 gagcttagctcagttggtatggacaatgcataatat 10199056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 14285253 - 14285186
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||||||||   |||||| |||||||||||||||||||  ||||||||||| |  ||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaat 14285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 26078050 - 26078125
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    |||||| ||||||||||||||| |||| ||| ||||||||| ||||| |||||| ||  | |||||||||||||||    
T  26078050 agaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtggg 26078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 26409255 - 26409290
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26409255 gagcttagctcagttggtatggacaatgcataatat 26409290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 30000231 - 30000156
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccc 539  Q
    ||||||||||||||| ||||| |||||||||| ||   ||| || |||||||||||| |||||| |||| ||||||    
T  30000231 gaagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggaggtgcatactccc 30000156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 35705101 - 35705042
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttga 523  Q
    ||||||| |||||||||||||| |||||| ||||  | |||||| |||||||||||||||    
T  35705101 gaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagaccttga 35705042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 37932332 - 37932367
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37932332 gagcttagctcagttggtatggacaatgcataatat 37932367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 661
Target Start/End: Original strand, 32283581 - 32283615
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataata 661  Q
    ||||||||||| |||||||||||||||||||||||    
T  32283581 gagcttagctcagttggtatggacaatgcataata 32283615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 34366815 - 34366873
Alignment:
Q  219 aaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagtttt 277  Q
    ||||||||||| || | ||||||||| || ||||||| | |||||||||||||||||||    
T  34366815 aaatgcatcctggggtcctttaagttgaatgtttgtaccggattagtccttttagtttt 34366873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 662
Target Start/End: Original strand, 42505875 - 42505909
Alignment:
Q  628 agcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||| ||||||||||||||||||||||||    
T  42505875 agcttagctcagttggtatggacaatgcataatat 42505909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 540
Target Start/End: Original strand, 87423 - 87460
Alignment:
Q  503 gaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||||||||||||||||  |||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactccca 87460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 994942 - 994890
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattac 440  Q
    ||||||||||| |||| |||| ||||| |||||||||||| |||||||||||||    
T  994942 tttaacattgatgtggtaggttcaaaa-gtgtttatgacatcaaacatgattac 994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 8822541 - 8822504
Alignment:
Q  409 caaaaagtgtttatgacaccaaacatgattacttacat 446  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  8822541 caaaaagtgtttatgacatcaaacataattacttacat 8822504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 16457917 - 16457812
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||| ||||||||  |||||||||||  | |||||  ||| |||||||||||||||  ||||||||| | | |||||||||||| || || ||||||| |    
T  16457917 taaactagcccacgcaaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaaccta 16457818  T
Q  571 agtggg 576  Q
    ||||||    
T  16457817 agtggg 16457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 498
Target Start/End: Original strand, 17877122 - 17877155
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcacca 498  Q
    |||||||||||||||||||||||||||| |||||    
T  17877122 aagaagttaaattagcccacctaaattgacacca 17877155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    |||||| ||||||||||||||||||||| |||||   | |||| ||||||| |||| ||||||  |||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 34984898 - 34984829
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||   |||||| ||||| |||||||||||||  ||||||||||| |  ||||||||||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaatac 34984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 1488366 - 1488398
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  1488366 gagcttagctcagttggtatggacaatgcataa 1488398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 4249355 - 4249315
Alignment:
Q  237 tttaagtttaacgtttgtatctgattagtccttttagtttt 277  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  4249355 tttaagtttaaagtttgtatcagattaatccttttagtttt 4249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 10099862 - 10099822
Alignment:
Q  235 tctttaagtttaacgtttgtatctgattagtccttttagtt 275  Q
    |||||||||||||||||||||||  ||| ||||||||||||    
T  10099862 tctttaagtttaacgtttgtatcgaatttgtccttttagtt 10099822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 10704390 - 10704358
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  10704390 gagcttagctcagttggtatggacaatgcataa 10704358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 540
Target Start/End: Original strand, 14495766 - 14495842
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||| ||||||| ||||||||||| |    ||||||||| ||||||||| ||||||  |||||||||||    
T  14495766 gaagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactccca 14495842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Original strand, 16188829 - 16188861
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  16188829 cttagctcagttggtatggacaatgcataatat 16188861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Original strand, 16188931 - 16188963
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  16188931 cttagctcagttggtatggacaatgcataatat 16188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 16600612 - 16600580
Alignment:
Q  411 aaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||||||||| ||||||||||||||||    
T  16600612 aaaagtgtttatgacatcaaacatgattactta 16600580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 529
Target Start/End: Original strand, 19087065 - 19087129
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagat 529  Q
    ||||||||||||||| |||||||||||| |||| |  | |||||||| ||||| ||||| |||||    
T  19087065 aagaagttaaattagtccacctaaattgtcaccgacgaaaatcaaacatgagagcttgatgagat 19087129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 20927636 - 20927676
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||||||||||| ||||||||    
T  20927636 tttgtgagcttagctcagttggtatggacaatacataatat 20927676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 28207134 - 28207166
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  28207134 gagcttagctcagttggtatggacaatgcataa 28207166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 32858672 - 32858704
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  32858672 gagcttagctccgttggtatggacaatgcataa 32858704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 537
Target Start/End: Original strand, 35360048 - 35360120
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    |||||| |||| | || ||||||||||||||||    |||||| |||||||||||| ||||||| ||||||||    
T  35360048 aagaagctaaactcgctcacctaaattggcaccggtgagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 540
Target Start/End: Complemental strand, 43442303 - 43442235
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||| | |||||| || ||   |||||| |||||||||||||||||||  |||||||||||    
T  43442303 taaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 9e-38; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 268 - 447
Target Start/End: Complemental strand, 24755195 - 24755022
Alignment:
Q  268 ttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgt 366  Q
    ||||||||| |||||||||||||| ||| |||||||||||| |||||||||||        | ||| | ||||||| || |||| |||||||||||||||    
T  24755195 ttttagtttcaaattggtcctttatgtctgtaaaagtgaacaagttagtcctt--------ttttgtatcaaattggtcccttttttcatccaactttgt 24755104  T
Q  367 tataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacata 447  Q
    || |||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  24755103 taaaaagtgcttacatggccatttaacattgaggtagaaggtccaaaaagtgtttatgacaccaaacatgactacttacata 24755022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 431
Target Start/End: Complemental strand, 42669209 - 42669124
Alignment:
Q  347 ctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaa 431  Q
    |||| ||||||||||||||||  |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  42669209 cttttttcatccaactttgttcaaaagtgcttacatgaccatttaacgttgaggtggaaggtccaaaaagtgtttatgacaccaaa 42669124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 4280412 - 4280525
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||||||||||||| |||| ||||| ||||| |  |||||||||||||||||||| |||||| |||||||| |||| |||||| ||||| ||||||     
T  4280412 gaagaagttaaattagctcacccaaattagcaccgaagagaatcaaacctgagaccttcaggagaagcacactctcaagtcccaagtcaatatcatcata 4280511  T
Q  563 ccaacccaagtggg 576  Q
    | ||||||||||||    
T  4280512 ctaacccaagtggg 4280525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 52116743 - 52116855
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| ||||||||||||||| ||||||||| | | |||||  |||||||||| ||||||||  ||||||||||||| |||||||||||| || || ||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  564 caacccaagtggg 576  Q
    |||||||| ||||    
T  52116843 caacccaactggg 52116855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 465 - 556
Target Start/End: Original strand, 27476733 - 27476824
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| ||||||||||||||||||| |||||||   |||||||||| ||||| || ||||||  ||||||||| ||| |||||||||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatac 27476824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 6122909 - 6122817
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| |||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  6122909 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 6122817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 21547441 - 21547533
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||| ||||||||||||||||||| ||   |||||| ||||||| |||| ||||||  |||| |||||| | |||||||||||||    
T  21547441 gaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaatac 21547533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 24047063 - 24047155
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||||||||| ||||||||||||||   | |||||| ||| ||| |||| ||||||  ||||||||||||| | |||||||||||    
T  24047063 gaagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaatac 24047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 31165617 - 31165707
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||||| |||| || |||||||  |||| ||||||||| || ||| |||||| ||||||| |||||||| ||||||||||||||||    
T  31165617 ttcatccaacttcgttaaaacgtgcttatagaccatttaacattaagatggtaggtcc-aaaagtgcttatgacatcaaacatgattactta 31165707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 581
Target Start/End: Complemental strand, 51814601 - 51814491
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| |||||||||||    |||||| |||||||||||||||||||  |||||||| ||   | |||| ||||| ||||| |||||||||    
T  51814601 taaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaaccca 51814502  T
Q  571 agtgggattta 581  Q
    |||||| ||||    
T  51814501 agtgggtttta 51814491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 442
Target Start/End: Complemental strand, 15183959 - 15183875
Alignment:
Q  357 ccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactt 442  Q
    ||||||| |||| ||||||||||  |||| ||||||||| || ||| |||||||||| ||| |||||||| |||||||||||||||    
T  15183959 ccaacttcgttaaaaagtgcttatagaccatttaacattaagatggtaggtccaaaa-gtgcttatgacatcaaacatgattactt 15183875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 31794225 - 31794338
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||| |||||| |||||    ||||| |||   |||||||||||||  ||||||||||||| |||||||||||| ||  | |    
T  31794225 gaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactagg 31794324  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  31794325 ccaacccaagtggg 31794338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 572
Target Start/End: Complemental strand, 43446070 - 43445969
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||| ||||||||  |||||||||||  | |||||| ||| |||||||||||||||  ||||||||| | |||||||||||| | ||||| |||||||||    
T  43446070 taaactagcccactcaaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaacaccatcaagccaaccca 43445971  T
Q  571 ag 572  Q
    ||    
T  43445970 ag 43445969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 44126510 - 44126397
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||| |||||||||||||| |   ||||||||| ||||||||| | ||||  ||||||||||| | |||| | ||||| || || |    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccagg 44126411  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  44126410 ccaacccaagtggg 44126397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 46798483 - 46798397
Alignment:
Q  358 caactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacat 446  Q
    ||||||||||| ||||||||||   ||| |||||||||||| ||| || || ||||  ||||||||||| |||||||||||||||||||    
T  46798483 caactttgttagaaagtgcttatgaaccatttaacattgagttggtagttcaaaaa--tgtttatgacatcaaacatgattacttacat 46798397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 21267954 - 21268046
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||   ||||||| ||||   |||||||||||  |||||| ||||||  ||||||||||||| |||||||||||||    
T  21267954 gaagaagctaaattagcccaaaaaaattggaaccagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatac 21268046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 540
Target Start/End: Complemental strand, 24730491 - 24730423
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||||| ||||||||||| || || |||||||||| |||||||| |||  |||||||||||    
T  24730491 taaattagcccacccaaattggcaccgaggaggatcaaacctgggaccttgaagaggagcacactccca 24730423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 31383759 - 31383851
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||| |||||||||| ||||||||||| |  |||||| |||||||||||   |||||  ||||||||||| | |||||||||||||    
T  31383759 gaagaaggtaagttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatac 31383851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    ||||||||||| || ||| | |||||||||||||   |||||| |||||||||||||||||||  |||||||||||    ||||||||||| ||  | ||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 574
Target Start/End: Complemental strand, 4825077 - 4824975
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||| ||| ||||| |||||| | |||||||||||||||||||||| |||  ||||||||| | | |||||||||| | |||||  ||||||||    
T  4825077 taaattagcc-acccaaattagcaccacggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaaccca 4824979  T
Q  571 agtg 574  Q
    ||||    
T  4824978 agtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 17297099 - 17297025
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagc-agaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    |||||| |||||||||||||| |||||||||||  |  |||||||||| |||||||||||||||  |||||||||    
T  17297099 aagaagctaaattagcccacccaaattggcaccgggggagaatcaaacatgagaccttgaggaggagcacactcc 17297025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 550
Target Start/End: Original strand, 19940833 - 19940919
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagc 550  Q
    ||||||| ||||  ||||||| ||||||||||||    |||||||||||||||||||| |||||  ||||||||| | |||||||||    
T  19940833 gaagaagctaaaccagcccacataaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagc 19940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 24019138 - 24019048
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaa-gacccaagccaa 553  Q
    ||||||| |||| ||||||||| ||||||| ||| || |||||| ||||| |||||||||||||  ||||||| | || ||||||||||||    
T  24019138 gaagaagctaaactagcccaccgaaattggtaccgaggagaatcgaacctaagaccttgaggaggagcacactacaaaggacccaagccaa 24019048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 1094640 - 1094607
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcacc 497  Q
    ||||||||||||||||||||||||||||||||||    
T  1094640 gaagaagttaaattagcccacctaaattggcacc 1094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 15786304 - 15786373
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| ||||||  |||||| |||||||||||||||||||  |||||||||||   |||||||||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 21392952 - 21392879
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    |||||||||||||||||||||  ||| ||||||  || || ||| |||||||||||||||||||  ||||||||    
T  21392952 gaagaagttaaattagcccactcaaactggcacagaggaggatcgaacctgagaccttgaggaggagcacactc 21392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 23532960 - 23532891
Alignment:
Q  380 atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||| ||||| ||||||||| |   |||||||| || |||||||||||||||| ||||||||||||||    
T  23532960 atgaccatttaatattgaggtgaattatccaaaaaatgcttatgacaccaaacataattacttacataca 23532891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 554
Target Start/End: Complemental strand, 50901695 - 50901607
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    |||||| |||||||||||||||||||||||||  || |||||| ||  |||||||| ||||||  ||||||| ||| | |||||||||||    
T  50901695 aagaagctaaattagcccacctaaattggcactgag-agaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 51062078 - 51062139
Alignment:
Q  380 atgaccttttaacattgaggtggaaggtccaaaaa-gtgtttatgacaccaaacatgattac 440  Q
    |||||| |||||||||||| || |||||||||||| || ||||||||| |||||||||||||    
T  51062078 atgaccatttaacattgagatgaaaggtccaaaaaggtatttatgacatcaaacatgattac 51062139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 8253736 - 8253776
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  8253736 tttgtgagcttagctcagttggtatggacaatgcataatat 8253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 10526938 - 10526846
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||| |||||| |||||| | |||   |||||| || ||||||||||||||||  ||| ||||||| | |||||||||||||    
T  10526938 gaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaatac 10526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 576
Target Start/End: Complemental strand, 21694535 - 21694448
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||  || |||||| ||||||||||||||||||   ||||||||||||| | |||||||||| || || | |||||||||||||    
T  21694535 aaattggcactgagaagaatcgaacctgagaccttgagga---gcacactcccaagtctcaagccaataccaccaggtcaacccaagtggg 21694448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 36124948 - 36124856
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||||||||||||| | | | || ||||||| ||||||||  |||||  |||||||| || | |||||| ||||||    
T  36124948 gaagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacctcaaggaggagcacactctcaggtcccaagtcaatac 36124856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 39012392 - 39012317
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    ||||||||| ||||||||||| ||  ||||||||||| |||||||||| ||| ||||||||| | | ||||||||||    
T  39012392 tagcccaccgaaattggcaccgaggggaatcaaacctaagaccttgagaaga-gcacactccaaggtcccaagccaa 39012317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 447
Target Start/End: Original strand, 52650644 - 52650740
Alignment:
Q  352 ttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacata 447  Q
    ||||||||||||||||| ||||| |||| |||||  ||||||||||||||| || | ||  |||||||||||| | ||||| ||| ||| |||||||    
T  52650644 ttcatccaactttgttaaaaagtccttacatgactatttaacattgaggtgaaatgcccccaaagtgtttatggccccaaatatggttaattacata 52650740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 2537792 - 2537745
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgag 524  Q
    ||||||||| |||||||||||||   ||||||||||||||||||||||    
T  2537792 tagcccaccgaaattggcaccaaatggaatcaaacctgagaccttgag 2537745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 443
Target Start/End: Complemental strand, 35307341 - 35307251
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| ||||||| |||| |||||| |||  || | ||||||||| || ||| |||||||||| |||||| ||||| ||||||||||||||||    
T  35307341 ttcagccaacttcgttaaaaagtgtttatagatcatttaacattaagatggtaggtccaaaa-gtgtttttgacatcaaacatgattactta 35307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 36428827 - 36428764
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    |||||||  ||| ||||||||| |||||||||||  | |||||||||| |||||||||||||||    
T  36428827 gaagaagcaaaactagcccacccaaattggcaccggggagaatcaaacatgagaccttgaggag 36428764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 42045431 - 42045396
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42045431 gagcttagctcagttggtatggacaatgcataatat 42045396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 45140065 - 45140030
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45140065 gagcttagctcagttggtatggacaatgcataatat 45140030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 553
Target Start/End: Complemental strand, 952623 - 952537
Alignment:
Q  467 gaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    |||| ||||||| ||||||||||||| || |  | |||||| |||||||||| |||||||   ||||||||||| | ||||||||||    
T  952623 gaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaa 952537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 576
Target Start/End: Original strand, 9165179 - 9165269
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||||   |||||  |||||||||| ||||||||  ||||||||||| | |||||||||||| ||  | |||||||||||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 9165269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 661
Target Start/End: Complemental strand, 24752707 - 24752673
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataata 661  Q
    ||||||||||| |||||||||||||||||||||||    
T  24752707 gagcttagctcagttggtatggacaatgcataata 24752673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 2799954 - 2799901
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||||||||   |||||| |||||||||||||||||||  |||||||||||    
T  2799954 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactccca 2799901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Complemental strand, 3266001 - 3265948
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    |||||| |||||||||||||||||||  |||||||||||||  ||||| |||||    
T  3266001 agaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Original strand, 7219879 - 7219952
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    ||||||| |||||||| ||||||||||||| | |||  |||||| |||||||||| | ||||||  ||||||||    
T  7219879 gaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 556
Target Start/End: Original strand, 8177166 - 8177235
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||   |||||| ||||||| |||||||||||  |||||||||||   |||||||||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 8177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 537
Target Start/End: Complemental strand, 12587384 - 12587312
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    ||||||| |||||||||||||||||||| |||||    |||||| |||||||||||| ||||||  ||||||||    
T  12587384 gaagaagctaaattagcccacctaaatt-gcaccggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 553
Target Start/End: Original strand, 31605817 - 31605898
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    |||| ||||||||| |||||||||||  | |||||| ||| |||||||||||||||  ||||||| | | | ||||||||||    
T  31605817 taaactagcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 40257514 - 40257401
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||| ||||||||| |||||| ||||    |||||  ||| |||||||| ||||||  ||||||||||| | | |||||||||| || || |    
T  40257514 gaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccagg 40257415  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  40257414 ccaacccaagtggg 40257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 549
Target Start/End: Complemental strand, 45266941 - 45266864
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaag 549  Q
    |||| ||||||| | |||||||||||  | |||||| |||||||||||||||||||  ||| ||||| ||| ||||||    
T  45266941 taaactagcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactccaaagccccaag 45266864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 2613724 - 2613756
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  2613724 gagcttagctcagttggtatggacaatgcataa 2613756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 3509997 - 3509965
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  3509997 cttagctcagttggtatggacaatgcataatat 3509965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 14520946 - 14520978
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  14520946 gagcttagctcagttggtatggacaatgcataa 14520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 17188727 - 17188695
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  17188727 gagcttagctcagttggtatggacaatgcataa 17188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 24162821 - 24162789
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  24162821 gagcttagctctgttggtatggacaatgcataa 24162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 25086485 - 25086517
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  25086485 gagcttagctcagttggtatggacaatgcataa 25086517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 26803507 - 26803475
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  26803507 cttagctcagttggtatggacaatgcataatat 26803475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 443
Target Start/End: Original strand, 27458299 - 27458331
Alignment:
Q  411 aaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||||||||| ||||||||||||||||    
T  27458299 aaaagtgtttatgacatcaaacatgattactta 27458331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 38947471 - 38947511
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaag 542  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactcccaag 38947511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 40227831 - 40227863
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  40227831 gagcttagctcagttggtatggacaatgcataa 40227863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 42888577 - 42888609
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  42888577 gagcttagctcagttggtatggacaatgcataa 42888609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 537
Target Start/End: Complemental strand, 44961879 - 44961807
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    |||||| |||||||||||||| |||||| ||| |   |||||| ||||||||||| |||||||  ||||||||    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 47763299 - 47763239
Alignment:
Q  390 aacattgagg-tggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||||||| ||||||||| |||  ||||||| |||||||| |||||||||||| |||||    
T  47763299 aacattgagggtggaaggtcgaaagtgtgtttacgacaccaatcatgattacttaaataca 47763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 48100724 - 48100756
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  48100724 gagcttagctcagttggtatggacaatgcataa 48100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 52336735 - 52336827
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| ||||||||||||| | |||||| |||||   | |||| ||||||||| ||| |||||  |||||||||||   |||||||||||||    
T  52336735 gaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatac 52336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 41487474 - 41487364
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||   ||||||||||| |||||||||||| || || |    
T  41487474 gaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggaga---acactcccaagtcccaagccaataccaccagg 41487378  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  41487377 ccaacccaagtggg 41487364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 577
Target Start/End: Original strand, 29385704 - 29385818
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    |||||||  ||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||||| ||| |||||||||| | ||||  |    
T  29385704 gaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccgg 29385803  T
Q  563 ccaacccaagtggga 577  Q
    |||||||||||||||    
T  29385804 ccaacccaagtggga 29385818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 30579450 - 30579337
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||||||||||||||||   | |||| ||||||||||||||||||| || ||||||||| | | |||||||||| || || |    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccagg 30579351  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  30579350 ccaacccaagtggg 30579337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 43591022 - 43590909
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||||||||||| ||||||||| | | |||||| |||||||||| ||||||||  ||||||||||||| |||||||||||| || || |    
T  43591022 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccagg 43590923  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||| ||||    
T  43590922 ccaacccaactggg 43590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 2446423 - 2446310
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||||||||||||||| ||||||    |||||| ||| ||||| || ||||||  ||||||||||||| |||||||||||| |||||      
T  2446423 gaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcaga 2446324  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  2446323 ccaacccaagtggg 2446310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 20335792 - 20335905
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatacatc-atg 562  Q
    |||||||||||||||||||| | |||||| || |    |||||| |||||||||||| ||||||  ||||||||||||| ||||||||||||| || |      
T  20335792 gaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctaga 20335891  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  20335892 ccaacccaagtggg 20335905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 23301563 - 23301676
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    |||||||||||||||| ||||  ||||| |||| ||  |||||||||| ||||||||  |||||  ||||||||||||| |||||| ||||| || || |    
T  23301563 gaagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccagg 23301662  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  23301663 ccaacccaagtggg 23301676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 472 - 556
Target Start/End: Original strand, 18056744 - 18056828
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||||| ||||| |||||  | |||||| ||||||||||||| |||||  ||||||||| |||||||||| ||||||    
T  18056744 taaattagcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaatac 18056828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 22932674 - 22932785
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||||||||||||||||||||| || ||| |||||||||||| |||||  |   || |||||||| | |||||||||||| || ||| |    
T  22932674 aagaagctaaattagcccacctaaattggcaccgag-agattcaaacctgagatcttgaataagagcgcactcccaggtcccaagccaataccaccatac 22932772  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  22932773 caacccaagtggg 22932785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 31835306 - 31835194
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||| |||||| || |||||||||||| | | |||| |||||||||||||||||||  ||||||||| |  ||||||||||| | || || ||    
T  31835306 aagaagctaaactagcccgccaaaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggc 31835207  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  31835206 caacccaagtggg 31835194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 21558243 - 21558180
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    ||||||| ||||||| |||||||||||||||||||   |||||| |||||||||||||||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggag 21558180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 25576370 - 25576296
Alignment:
Q  217 ccaaatgcatcctaggtttctttaagtttaacgtttgtatctgattagtccttttagttttaaattggtccttta 291  Q
    |||| |||||||| || | |||||||||||||||||||| | |||||||| ||||||||| ||||| ||||||||    
T  25576370 ccaattgcatcctggggtcctttaagtttaacgtttgtaccggattagtcgttttagtttcaaattagtccttta 25576296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 576
Target Start/End: Original strand, 26459394 - 26459484
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||||   |||||| |||||||||||||||||||  ||||||||||| | |||||||||||| ||  | |||||||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 26459484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 576
Target Start/End: Original strand, 38374563 - 38374673
Alignment:
Q  467 gaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgcca 565  Q
    |||| |||| |||||||||||||||||||||  | |||||| ||||| |||||||||||||  ||||||||  | | |||||||||| | || || ||||    
T  38374563 gaagctaaactagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgcca 38374662  T
Q  566 acccaagtggg 576  Q
    |||||||||||    
T  38374663 acccaagtggg 38374673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 15137660 - 15137555
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| |||||| |||||   |||||| |||||||||||||||||||  ||||||||| ||  |||||| || || || || |||||||||    
T  15137660 taaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaaccca 15137561  T
Q  571 agtggg 576  Q
    ||||||    
T  15137560 agtggg 15137555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 553
Target Start/End: Original strand, 5579204 - 5579284
Alignment:
Q  473 aaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    |||||| |||||| |||||||||||  | ||| ||||||||||||||||||||||  ||||||||| | | ||||||||||    
T  5579204 aaattatcccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaa 5579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 41519226 - 41519317
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||||||||||| |||  || |||| | |||||||||||||||||||  ||||||||| ||  |||||| ||||||    
T  41519226 gaagaagctaaattagcccacctaaattgacacagag-agaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaatac 41519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 540
Target Start/End: Complemental strand, 42712065 - 42711997
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||||||||||||||||| ||| | | |||||| ||| |||||||||||||||  |||||||||||    
T  42712065 taaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactccca 42711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 48772052 - 48771940
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||||||||||||||||| ||   | | |||| ||||||||||||  |||||  |||||||||||   |||||||||||| || || ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  48771952 caacccaagtggg 48771940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 449
Target Start/End: Original strand, 30738482 - 30738525
Alignment:
Q  406 gtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  30738482 gtccaaaaagtgttcattacaccaaacatgattacttacataca 30738525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 449
Target Start/End: Original strand, 43230753 - 43230863
Alignment:
Q  334 aacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaac 432  Q
    |||||||||||| ||||  ||||| |||||||||| ||| |||||| | |||| ||||| ||||||||| | | |||||||||||||||||||| |||||    
T  43230753 aacaaattgatcccttt--tcatctaactttgttaaaaa-tgcttacaagaccatttaatattgaggtgaaggatccaaaaagtgtttatgacatcaaac 43230849  T
Q  433 atgattacttacataca 449  Q
       ||||||||||||||    
T  43230850 ---attacttacataca 43230863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 576
Target Start/End: Complemental strand, 22760967 - 22760865
Alignment:
Q  475 attagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagt 573  Q
    ||||||||||  ||||||||| |  | |||||| |||||||||||||||||||  ||||||||||| | |||||| ||||| || ||  |||||||||||    
T  22760967 attagcccactcaaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagt 22760868  T
Q  574 ggg 576  Q
    |||    
T  22760867 ggg 22760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 33763127 - 33763161
Alignment:
Q  410 aaaaagtgtttatgacaccaaacatgattacttac 444  Q
    |||||||||||||||||||||||||||||||||||    
T  33763127 aaaaagtgtttatgacaccaaacatgattacttac 33763161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 578
Target Start/End: Original strand, 44628146 - 44628259
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa-tacatcatgc 563  Q
    |||||| |||||||||||||| |||||| |||| ||  ||||||||| |||||| ||||||||  ||||||||| | | ||||||| ||  ||| || ||    
T  44628146 aagaagctaaattagcccaccaaaattgacaccgag-ggaatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggc 44628244  T
Q  564 caacccaagtgggat 578  Q
    |||||||||||||||    
T  44628245 caacccaagtgggat 44628259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 576
Target Start/End: Original strand, 6426023 - 6426126
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttg---aggagatgcacactcccaagacccaagccaata-catcatgccaacccaag 572  Q
    ||||| ||| ||||||||||| || ||||||||||||| |||||||   |||| | ||| ||||| |||||||||||||| | || || |||||||||||    
T  6426023 tagccaaccgaaattggcaccgaggagaatcaaacctgggaccttgagcaggaaaagcatactccaaagacccaagccaacaccaccaggccaacccaag 6426122  T
Q  573 tggg 576  Q
    ||||    
T  6426123 tggg 6426126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 580985 - 580953
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    |||||||||||||||||||||||||||||||||    
T  580985 gagcttagctcggttggtatggacaatgcataa 580953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 5273552 - 5273664
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||| ||||||||| |||||||||||    | |||||||||| |||||||||||||  ||||||||  | | |||||||||| | || || ||    
T  5273552 aagaagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggc 5273651  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  5273652 caacccaagtggg 5273664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 11720921 - 11721013
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| ||||||||||   | |||||| || |||| ||||| |||||  ||||| ||||| | |||||||||||||    
T  11720921 gaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaatac 11721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 19553567 - 19553460
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||| ||||||||||||||||| |||  | |||||  ||||| |||||||||||||  |||||||||| ||  ||||||||||| || || ||    
T  19553567 aagaagctaaagtagcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactccc-aggtccaagccaataccaccaggc 19553469  T
Q  564 caacccaag 572  Q
    |||||||||    
T  19553468 caacccaag 19553460  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 24513911 - 24513799
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    ||||||||||||||||||||| |||||| || ||   | |||| ||||||||||||  |||||| | ||||||||||  | |||||||||| ||  | ||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  24513811 caacccaagtggg 24513799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 662
Target Start/End: Complemental strand, 42043130 - 42043090
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  42043130 tttgtgagcttagctcagttggtatggacaatgcataatat 42043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 5526727 - 5526762
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5526727 gagcttagctcagttggtatggacaatgcataatat 5526762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 10244729 - 10244764
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10244729 gagcttagctcagttggtatggacaatgcataatat 10244764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 541
Target Start/End: Complemental strand, 18363773 - 18363734
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaa 541  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  18363773 agaatcaaacctgagaccttgaggaggagcacactcccaa 18363734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 556
Target Start/End: Complemental strand, 21877922 - 21877831
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||||||||||  || ||||||||  | |||||| ||| ||||||||| |||||  |||| |||||| | |||||| ||||||    
T  21877922 aagaagttaaattagcccactcaatttggcaccgtggagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaatac 21877831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 38841989 - 38842024
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38841989 gagcttagctcagttggtatggacaatgcataatat 38842024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 39801708 - 39801743
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39801708 gagcttagctcagttggtatggacaatgcataatat 39801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 48980489 - 48980524
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  48980489 gagcttagctcagttggtatggacaatgcataatat 48980524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 555
Target Start/End: Original strand, 279916 - 280005
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    |||||| |||||||||||||| |||||||||||    |||||  ||||||||||||| |||||  | ||||||||||  ||||||||||||    
T  279916 aagaagctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactcccaa-tcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 7309470 - 7309389
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagaccc 546  Q
    ||||||| ||||||||||||| ||||||| |||  || |||||| ||| |||||||| ||||||  |||||||||| ||||||    
T  7309470 gaagaagctaaattagcccacttaaattgacacggag-agaatcgaacttgagacctcgaggaggagcacactccccagaccc 7309389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 472 - 554
Target Start/End: Complemental strand, 11700271 - 11700190
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    |||||||||||||  ||||||||||  || |||||| |||||||||||||||||||  ||| |||| |||| | |||||||||    
T  11700271 taaattagcccactcaaattggcacagag-agaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaat 11700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 661
Target Start/End: Original strand, 20243257 - 20243291
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataata 661  Q
    ||||||||||| |||||||||||||||||||||||    
T  20243257 gagcttagctcagttggtatggacaatgcataata 20243291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 27313695 - 27313773
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaag 542  Q
    ||||||| ||||||||| |||||||||||||| ||   |||||| || |||| |||||||||||  ||| |||||||||    
T  27313695 gaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactcccaag 27313773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 556
Target Start/End: Complemental strand, 43215261 - 43215207
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||||||||  ||||||||| | | |||||||||||||    
T  43215261 agaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 43215207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 538
Target Start/End: Complemental strand, 2883052 - 2882991
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    |||||||||||||||| |||||   |||||  |||||||||||||||||||  |||||||||    
T  2883052 tagcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 526
Target Start/End: Original strand, 20468286 - 20468347
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgagga 526  Q
    ||||||||||| ||||||||| ||||||||| |  | |||||| ||||| ||||||||||||    
T  20468286 aagaagttaaactagcccacccaaattggcatctgggagaatcgaacctaagaccttgagga 20468347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 30053986 - 30053934
Alignment:
Q  390 aacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| ||||||||    
T  30053986 aacattgaggtggaaggtc-aaacactatttatgacaccaaacataattactta 30053934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 33407136 - 33407220
Alignment:
Q  358 caactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    ||||||||||| ||| ||||||  |||| ||||||||||| | |  |||| ||||| | |||||||||| ||||||||||||||||    
T  33407136 caactttgttaaaaattgcttatggaccatttaacattgatgcgttaggttcaaaagg-gtttatgacatcaaacatgattactta 33407220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 34595923 - 34595983
Alignment:
Q  382 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| ||||||||| || ||| |||||||||| |||||||||||| |||| |||||||||||    
T  34595923 gaccatttaacattaagatggtaggtccaaaa-gtgtttatgacatcaaatatgattactta 34595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 524
Target Start/End: Original strand, 4566398 - 4566449
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgag 524  Q
    |||||||||| | ||||||||||||||   |||||||||||||||||||||||    
T  4566398 taaattagcc-atctaaattggcaccagagagaatcaaacctgagaccttgag 4566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 8615020 - 8615060
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  8615020 tttgtgagcttagctcagttggtaaggacaatgcataatat 8615060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 540
Target Start/End: Original strand, 9183160 - 9183228
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||||| |||||| |||||   | |||| |||||||||| ||||||||  |||||||||||    
T  9183160 taaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 15905635 - 15905726
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||| |||||| |||||| ||  | | |||||| ||||||||||| | |||||  ||||||||||| | |||||||||||||    
T  15905635 gaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagacc-taaggaggagcacactcccaggtcccaagccaatac 15905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 19416516 - 19416548
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  19416516 gagcttagctcagttggtatggacaatgcataa 19416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 368
Target Start/End: Original strand, 25576135 - 25576207
Alignment:
Q  296 gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgtta 368  Q
    |||||||||||| |||| |||||| | || | | ||| |||||||||||| |||| ||||| |||||||||||    
T  25576135 gtaaaagtgaacaagttggtcctttaattattttttgtaacaaattgatcccttttttcatacaactttgtta 25576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 38728210 - 38728242
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  38728210 gagcttagctcagttggtatggacaatgcataa 38728242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 43346620 - 43346588
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  43346620 cttagctcagttggtatggacaatgcataatat 43346588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 525
Target Start/End: Original strand, 48983695 - 48983755
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgagg 525  Q
    ||||||||||||||||||||| |||||| ||| |    ||||| |||||||||||||||||    
T  48983695 aagaagttaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagg 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 449
Target Start/End: Original strand, 11862106 - 11862297
Alignment:
Q  262 tagtccttttagttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgc-aacaaattgatctctttcttcatcca 359  Q
    |||| |||||||||| |||||||||||||| ||| |||||||||||| | ||| ||||| ||| || | |||  ||||||||  |  |||| ||||||||    
T  11862106 tagttcttttagtttcaaattggtcctttatgtcagtaaaagtgaacaacttaatcctttattatttttttggtaacaaattagttccttttttcatcca 11862205  T
Q  360 actttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgaca-ccaaacatgattacttacataca 449  Q
    ||||  ||| |||||||| | || ||| |||||||||| |||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  11862206 acttccttaaaaagtgctcacataaccatttaacattggggtggaaggtccaaaaagtgttaatgatacccaaacatgattacttacataca 11862297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 23052492 - 23052597
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| ||| |||||| | | |||||| |||||||||||||||||||| ||||||||||||| |||||||||||| || || ||||||| |    
T  23052492 taaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaaccta 23052591  T
Q  571 agtggg 576  Q
    ||||||    
T  23052592 agtggg 23052597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 556
Target Start/End: Complemental strand, 11251198 - 11251110
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||| ||||||||||| |||||   ||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||    
T  11251198 aagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatac 11251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 37480190 - 37480077
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||| ||||||| |||  | |||||| |||||||||||||||||||  |||||||| || | |||||||||||| || || |    
T  37480190 gaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccagg 37480091  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  37480090 ccaacccaagtggg 37480077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 42327364 - 42327469
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| ||||||||||| |  |||||| |||||||||||||||||||  ||||||||||| | |||||||||||| ||  | |||||||||    
T  42327364 taaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 42327463  T
Q  571 agtggg 576  Q
    ||||||    
T  42327464 agtggg 42327469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 19016145 - 19016033
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||||| || ||||||||||||  | |||||||||| |||||||| ||||||  ||||||||||||| | |||||||||| |||||  |    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagac 19016046  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  19016045 caacccaagtggg 19016033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 576
Target Start/End: Original strand, 29197341 - 29197450
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaa 566  Q
    ||||||||||||||||||||||||||||||  | |||||| ||| |||||| |  |||||  ||||||||||||| |||||| ||||| || || |||||    
T  29197341 aagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaa 29197440  T
Q  567 cccaagtggg 576  Q
    ||||||||||    
T  29197441 cccaagtggg 29197450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 42602669 - 42602556
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||| |||||||||||    |||||||||||| |||||||||| ||  ||||||||||| | |||||||||||| ||  | |    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactagg 42602570  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  42602569 ccaacccaagtggg 42602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 11062437 - 11062362
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||| ||  | |||||||||||||||    
T  11062437 agaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtggg 11062362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 25319191 - 25319118
Alignment:
Q  358 caactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaa 431  Q
    ||||||||||| ||| || ||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  25319191 caactttgttaaaaaatgattatatgaccatttaacattgaggtggaaggt-caaaaagtgtttatgacaccaaa 25319118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 1435178 - 1435066
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||| |||||| |||||   |||||| ||| |||||||||||||||| ||||||||| ||  ||||||||| || ||  |||    
T  1435178 gaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatg 1435080  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  1435079 ccaacccaagtggg 1435066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 39715099 - 39714994
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    ||||||||||||||||||||||  |   | |||||| |||||||||||| ||||||  ||||||||||| | |||||| ||||| || ||||||||||||    
T  39715099 taaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaaccca 39715000  T
Q  571 agtggg 576  Q
    ||||||    
T  39714999 agtggg 39714994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 553
Target Start/End: Original strand, 12517715 - 12517803
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    ||||||| |||||||||||||| || ||||||||| | |||||||||| |||||||||||||||  ||| ||||| | | ||||||||||    
T  12517715 gaagaagctaaattagcccacccaa-ttggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 29503385 - 29503273
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||| |||||| ||||||| ||||  | |||||| |||||||||||||||||||  ||||||||||| | ||||| |||||| ||  | |    
T  29503385 gaagaagctaaatttgcccacttaaattgacaccggg-agaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactagg 29503287  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  29503286 ccaacccaagtggg 29503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 21213884 - 21213792
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||  ||| |||||||||||||||||||||  | |||||| ||||||||||||  |||||   |||||||||| | |||||||||||||    
T  21213884 gaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaatac 21213792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 35436210 - 35436287
Alignment:
Q  352 ttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaa 430  Q
    ||||||||||||||||| ||| || ||| |||||| ||||||||| |||||||||||||||||  |||| ||||||||||    
T  35436210 ttcatccaactttgttaaaaaatgtttacatgaccatttaacattaaggtggaaggtccaaaa--tgttgatgacaccaa 35436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 556
Target Start/End: Original strand, 12086091 - 12086182
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||||||||| |||||     ||||| |||| ||||||||||||||  ||||||| ||| | |||||||||||||    
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaatac 12086182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 575
Target Start/End: Original strand, 33962746 - 33962857
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||| |||||||||||||||| ||| |||||| || | |||| || ||||||  |||||||||||   ||||| |||||| ||| | ||    
T  33962746 aagaagataaattagtccacctaaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggc 33962845  T
Q  564 caacccaagtgg 575  Q
    ||||||||||||    
T  33962846 caacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 83570 - 83630
Alignment:
Q  382 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || ||||||||||| ||||    
T  83570 gaccatttaacattgaggtggtaggtcc-aaaagtgtttatgtcatcaaacatgattgctta 83630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 556
Target Start/End: Complemental strand, 1729908 - 1729839
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||||||||   ||||||||| || |||||| ||||||  ||||||||||||| |||||||||||||    
T  1729908 aaattggcaccagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaatac 1729839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 26482207 - 26482095
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    |||||||  ||||||||||||  ||||||||||  || |||||| ||||||||||||||| |||  ||||||||| | | |||||||||| | ||||| |    
T  26482207 gaagaagccaaattagcccactgaaattggcactgaggagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcagg 26482109  T
Q  563 ccaacccaagtggg 576  Q
    |||||| |||||||    
T  26482108 ccaacctaagtggg 26482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 576
Target Start/End: Complemental strand, 16525275 - 16525180
Alignment:
Q  481 ccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||| |||||||||||  | |||||| ||||||||||||||| |||  ||||||||| | | |||||||||| | ||||| |||||||||||||||    
T  16525275 ccaccgaaattggcaccggggagaatcgaacctgagaccttga-gagtcgcacactccaacgtcccaagccaacaccatcaggccaacccaagtggg 16525180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 556
Target Start/End: Complemental strand, 19244216 - 19244132
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||||||||  ||||||||||||   |||||| |||||||||||||| ||||  |||||||| || | |||||| ||||||    
T  19244216 taaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatac 19244132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 25637266 - 25637190
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||||||||||||||||||||||| |    |||| | |||||||||||| ||| ||  |||||||||||    
T  25637266 gaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactccca 25637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 4056792 - 4056827
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4056792 gagcttagctcggttggtaaggacaatgcataatat 4056827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 440
Target Start/End: Complemental strand, 7889434 - 7889403
Alignment:
Q  409 caaaaagtgtttatgacaccaaacatgattac 440  Q
    ||||||||||||||||||||||||||||||||    
T  7889434 caaaaagtgtttatgacaccaaacatgattac 7889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 9383268 - 9383233
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9383268 gagcttagctcagttggtatggacaatgcataatat 9383233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 556
Target Start/End: Original strand, 21195638 - 21195729
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||| | |||||| ||| |    ||||| |||||||||||||||||||  |||||||||||||  ||||||| ||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctatac 21195729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 44526130 - 44526165
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44526130 gagcttagctcagttggtatggacaatgcataatat 44526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 662
Target Start/End: Original strand, 7350549 - 7350583
Alignment:
Q  628 agcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||| ||||||||||||||||||||||||    
T  7350549 agcttagctcagttggtatggacaatgcataatat 7350583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 581
Target Start/End: Original strand, 7798997 - 7799114
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||| || |||||||||||     |||||| || |||||| || ||||||  ||||||||||||| |||||||||||| || || |    
T  7798997 gaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccagg 7799095  T
Q  563 ccaacccaagtgggattta 581  Q
     ||||||||||||| ||||    
T  7799096 acaacccaagtgggtttta 7799114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 10019620 - 10019678
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
    |||||| ||||||||  | ||||||||||||||||| || ||||||||| |||||||||    
T  10019620 tttaactttgaggtgctaagtccaaaaagtgtttattactccaaacatggttacttaca 10019678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 18077363 - 18077437
Alignment:
Q  370 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||| |||||  ||||| |||||  |||||||||||||| || |||| |||||||||||||||| ||||    
T  18077363 aaagtgcttacatgacgatttaaaattgacatggaaggtccaaaacgtttttaagacaccaaacatgatttctta 18077437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 538
Target Start/End: Original strand, 41908599 - 41908673
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    ||||||| |||| ||||||||| |||||||||||  | | |||| ||| |||||||||||||||  |||||||||    
T  41908599 gaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 4262301 - 4262354
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    |||||| |||||||||||||||||||  ||||||| ||| | ||||||||||||    
T  4262301 agaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 33428792 - 33428848
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 444  Q
    |||||||||||||||| | || ||||| |||||||||||| |||| ||||||||||||    
T  33428792 tttaacattgaggtggtatgttcaaaa-gtgtttatgacatcaaatatgattacttac 33428848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 35716702 - 35716645
Alignment:
Q  388 ttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
    ||||||||||| ||  | |||||||||||||||||||||  ||| |||||||||||||    
T  35716702 ttaacattgagatgacaagtccaaaaagtgtttatgacataaaaaatgattacttaca 35716645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 523
Target Start/End: Complemental strand, 37972008 - 37971951
Alignment:
Q  466 agaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttga 523  Q
    ||||| ||||||||||||||||||||||||||    |||||| |||||||||| ||||    
T  37972008 agaagctaaattagcccacctaaattggcaccggagagaatcgaacctgagactttga 37971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 41390338 - 41390305
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcacc 497  Q
    |||||||||||||||||||||| |||||||||||    
T  41390338 gaagaagttaaattagcccacccaaattggcacc 41390305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 43043224 - 43043191
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataat 660  Q
    |||||||||||||||||||| |||||||||||||    
T  43043224 gagcttagctcggttggtatagacaatgcataat 43043191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Original strand, 4509542 - 4509574
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||||| |||||||||||||||||||    
T  4509542 cttagctcggttgatatggacaatgcataatat 4509574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 7401067 - 7401123
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||||| ||||| |||||||||||| ||||||| |  ||||| ||||||||    
T  7401067 tttaacattgagatggaaagtccaaaaagtggttatgaccctgaacataattactta 7401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 524
Target Start/End: Complemental strand, 12632825 - 12632773
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgag 524  Q
    ||||||||||||||||||||| |||| |  |||||  ||||||||||||||||    
T  12632825 taaattagcccacctaaattgacaccgatgagaattgaacctgagaccttgag 12632773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 25598618 - 25598586
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  25598618 cttagctcagttggtatggacaatgcataatat 25598586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 26276469 - 26276381
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    |||||| ||||| || |||||||||||| |||| |  |||| | |||||||||||||||||||  ||||||| | | | ||||||||||    
T  26276469 aagaagctaaatcagtccacctaaattgacaccgacgagaaacgaacctgagaccttgaggaggagcacactacaaggccccaagccaa 26276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Complemental strand, 33832733 - 33832693
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| |||||||||||||||||||  |||||||||||||||    
T  33832733 tttgtgagcttagctcggttggtaacgacaatgcataatat 33832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 16852455 - 16852342
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||| |||||||||||||||||||| ||| |||||| |||||||||||| ||||||  ||||||||||| | |||||||||||| ||  | |    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactagg 16852356  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  16852355 ccaacccaagtggg 16852342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 28783175 - 28783062
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||| ||||||||||| || |||||| ||| |||||||||||||||  ||||||||||| | | |||||||||| || || |    
T  28783175 gaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaag 28783076  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  28783075 ccaacccaagtggg 28783062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 449
Target Start/End: Original strand, 4187205 - 4187360
Alignment:
Q  295 cgtaaaagtgaacgagttagtccttcatttttatctt-gcaacaaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaac 392  Q
    ||||||||||||| |||| |||||| | ||| || || | || ||||||||   ||| |||||| |||||||||| ||| || ||| |||| | ||||||    
T  4187205 cgtaaaagtgaacaagttggtcctttagtttaatttttgtaataaattgattaattttttcatctaactttgttaaaaa-tgtttacatgatcatttaac 4187303  T
Q  393 attgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  4187304 attgaggtggaaggtccaattagtgtttatgacatcaaacatgattacttacataca 4187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 1228941 - 1229035
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaa-tgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
    ||||| ||||||||||| |||||| |||| ||||| |||||||||| ||| ||||||||||||||| ||||||| |||||||||||| |||||||    
T  1228941 ttcattcaactttgttaaaaagtgtttaaatgaccatttaacattgcggtagaaggtccaaaaagtatttatgataccaaacatgatcacttaca 1229035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 44780075 - 44780165
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||| |||||||||||||| |||||| ||| |    |||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  44780075 gaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 576
Target Start/End: Original strand, 19703452 - 19703561
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaa 566  Q
    ||||||||||||||||||| ||||| ||| | | |||||| |||||||||||||||||||  |||||||| || | |||||||||||| ||  | |||||    
T  19703452 aagttaaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaa 19703551  T
Q  567 cccaagtggg 576  Q
    ||||||||||    
T  19703552 cccaagtggg 19703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 29858018 - 29858123
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||||||||||||||| ||  ||||| |||||||||||| ||||||  ||||||||||  | |||||||||||| || || ||||| |||    
T  29858018 taaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatcca 29858117  T
Q  571 agtggg 576  Q
    ||||||    
T  29858118 agtggg 29858123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 968476 - 968364
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||||||||||||||||||||||| |    |||||| |||||||||||| ||||||  ||||||||||| | |||||||||||| || || ||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  564 caacccaagtggg 576  Q
    |||| ||||||||    
T  968376 caactcaagtggg 968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 6536635 - 6536543
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||| |||||||||||||||||||   |||||  |||||||||||||||||||  ||||||||| | | |||||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 6536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 2203599 - 2203494
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    |||||||||||||| |||||||||||  | |||||  | |||||||||||||||||  ||||||||||| | |||||||||||| ||  | |||||||||    
T  2203599 taaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 2203500  T
Q  571 agtggg 576  Q
    ||||||    
T  2203499 agtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 9550777 - 9550693
Alignment:
Q  358 caactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactt 442  Q
    ||||||||||| |||||| ||| |||||| |||||||||||||||||||||  ||||| | ||||||||||||||||| |||||||    
T  9550777 caactttgttaaaaagtgattatatgaccatttaacattgaggtggaaggt-taaaaaatatttatgacaccaaacataattactt 9550693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 18540413 - 18540300
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||| ||| |  ||||||||||||   |||||| |||||||||||||||||||| | ||||||||| | |||||||||||| ||  | |    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  18540313 ccaacccaagtggg 18540300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 29431126 - 29431013
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||||||||||  ||||| |||||||  |||||| |||||||| |||  |||||  ||||||||||||| |||||||||||| |  || |    
T  29431126 gaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccagg 29431027  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  29431026 ccaacccaagtggg 29431013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 31088788 - 31088678
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatacatcatgc 563  Q
    |||||||||||||||||| ||||||||||| | ||   ||||||||||||||||||| ||||| |  ||||||| || | |||||| ||||  |||||||    
T  31088788 gaagaagttaaattagcctacctaaattggtatcagagagaatcaaacctgagacctcgaggataatcacactcgcaggtcccaagtcaat--atcatgc 31088691  T
Q  564 caacccaagtggg 576  Q
    |||||||| ||||    
T  31088690 caacccaaatggg 31088678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 11819891 - 11819799
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| |||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  11819891 gaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 11819799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 35749165 - 35749059
Alignment:
Q  337 aaattgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatg 435  Q
    ||||||||| |||| |||||||||||||| || |||||||||| |||| | ||||||||||| ||  || || |||| ||||||||||| ||||||||||    
T  35749165 aaattgatc-cttttttcatccaactttggtaaaaagtgcttacatgatcatttaacattgatgtcaaaagttcaaagagtgtttatgataccaaacatg 35749067  T
Q  436 attactta 443  Q
    ||| ||||    
T  35749066 atttctta 35749059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 538
Target Start/End: Original strand, 11793482 - 11793556
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    ||||||| |||| ||||||||| |||||||||||  | |||||||||||| |||||||||||||  |||||||||    
T  11793482 gaagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactcc 11793556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 40591843 - 40591734
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    ||||| ||||||||  ||||||||||||||| | |  ||||||||||||||||| |||||||   ||||||||||||| || ||||||||| || || ||    
T  40591843 aagaaattaaattactccacctaaattggcatcgaagagaatcaaacctgagactttgagga---gcacactcccaagtccgaagccaataccaccaggc 40591747  T
Q  564 caacccaagtggg 576  Q
    |||| ||||||||    
T  40591746 caacacaagtggg 40591734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 576
Target Start/End: Complemental strand, 3624686 - 3624582
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    ||||||||||||||||||||| | |  || |||||| ||||||||||||||| |||  ||||||||||| | |||||||||||| ||  | |||||||||    
T  3624686 taaattagcccacctaaattgacccggag-agaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaaccca 3624588  T
Q  571 agtggg 576  Q
    ||||||    
T  3624587 agtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 472 - 576
Target Start/End: Original strand, 23361618 - 23361723
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaaccca 570  Q
    ||||||||||||||||||||| |||||   |||||  |||||||||||||||||||  |||||||||||   |||||| ||||| || || | |||||||    
T  23361618 taaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccca 23361717  T
Q  571 agtggg 576  Q
    ||||||    
T  23361718 agtggg 23361723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 3058011 - 3058102
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||| ||||||||||||||| | || |  |||||| ||||||||||||||  |||  ||||||||||||||||||| |||||||    
T  3058011 gaagaagctaaat-agcccacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaatac 3058102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 23874345 - 23874456
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||||||||||||||||||||||||| ||| | | |||| | |||||||||||| ||||||  ||| | ||||| | |||||||||||| ||  | ||    
T  23874345 aagaagttaaattagcccacctaaattgtcactaggaagaa-cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggc 23874443  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  23874444 caacccaagtggg 23874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 34966811 - 34966903
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||||||| || ||||  | | |||||||| |||||||| || |||  ||||||||||||| | |||||||||||    
T  34966811 gaagaagctaaattagcccacctaaaatgccaccggggataatcaaacttgagacctcgaagagtagcacactcccaagtctcaagccaatac 34966903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 43968960 - 43969072
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac-atcatgc 563  Q
    |||||| |||||||| |||||||||||  |||||   | |||| || |||||||||   ||||  ||||||||| ||| ||||||||||||| |||||||    
T  43968960 aagaagataaattagtccacctaaattaacaccagagataatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgc 43969059  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  43969060 caacccaagtggg 43969072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 537
Target Start/End: Complemental strand, 18897265 - 18897208
Alignment:
Q  480 cccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactc 537  Q
    ||||||||||||||||||| | |||||| ||| |||||||||||||||  ||||||||    
T  18897265 cccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactc 18897208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 556
Target Start/End: Complemental strand, 27750806 - 27750753
Alignment:
Q  503 gaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||| |||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 27750753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 416
Target Start/End: Original strand, 28451913 - 28451990
Alignment:
Q  340 ttgatctctttcttcatccaactttgttataaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagt 416  Q
    ||||||| ||| ||||| |||||||||||||||||||||| |||||  |||||| ||| |||||||| | ||||||||    
T  28451913 ttgatctgttttttcatacaactttgttataaagtgcttatatgactatttaaccttgtggtggaagattcaaaaagt 28451990  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 29029168 - 29029115
Alignment:
Q  390 aacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||| |||||||||||||||||| | ||||| |||| |||||||||||||||    
T  29029168 aacattaaggtggaaggtccaaaaaatatttataacacaaaacatgattactta 29029115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 26688979 - 26688867
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||| ||||||||| |||||| ||| | | ||||   |||||||||||||||||||  ||||||||| | | |||||||||| | || || ||    
T  26688979 aagaagctaaactagcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggc 26688880  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  26688879 caacccaagtggg 26688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 28787473 - 28787529
Alignment:
Q  480 cccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacact 536  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||  |||||||    
T  28787473 cccacctaaattggcactggggagaatcaaacctgagaccttgaggaggagcacact 28787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 30427728 - 30427768
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  30427728 tttgtgagcttagctcagttggtatggacaatgcataatat 30427768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 536
Target Start/End: Complemental strand, 10287589 - 10287518
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacact 536  Q
    |||||| |||||||||||||||||||||  |  ||| |||||  |||||||||||| ||||||| |||||||    
T  10287589 aagaagataaattagcccacctaaattgatataaaggagaattgaacctgagacctcgaggagaagcacact 10287518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 536
Target Start/End: Complemental strand, 11979366 - 11979295
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacact 536  Q
    |||||| |||| | ||||||||||||||||| || |||||| | ||||| |||||||||| ||| |||||||    
T  11979366 aagaagctaaactggcccacctaaattggcatcaggcagaaccgaacctaagaccttgagaagaagcacact 11979295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 540
Target Start/End: Original strand, 3305151 - 3305225
Alignment:
Q  466 agaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||| |||||||||||||||||||||||||||   | |||| ||  |||||||||||||||  |||| ||||||    
T  3305151 agaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctccca 3305225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 523
Target Start/End: Original strand, 36034483 - 36034541
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttga 523  Q
    |||||| | ||||||||||||||||||| |||||   |||||||||| |||||||||||    
T  36034483 aagaagcttaattagcccacctaaattgacaccagagagaatcaaacttgagaccttga 36034541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 8485114 - 8485081
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcacc 497  Q
    ||||||| ||||||||||||||||||||||||||    
T  8485114 gaagaagctaaattagcccacctaaattggcacc 8485081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 660
Target Start/End: Complemental strand, 19163595 - 19163562
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataat 660  Q
    ||||||||||| ||||||||||||||||||||||    
T  19163595 gagcttagctcagttggtatggacaatgcataat 19163562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 32350818 - 32350890
Alignment:
Q  370 aaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    ||||||||||  |||| ||||||||| || ||  ||||| |||| |||||||||||| ||||||||||||||||    
T  32350818 aaagtgcttatagaccatttaacattaagatgataggtctaaaa-gtgtttatgacatcaaacatgattactta 32350890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 32367479 - 32367551
Alignment:
Q  370 aaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    ||||||||||  |||| ||||||||| || ||  ||||| |||| |||||||||||| ||||||||||||||||    
T  32367479 aaagtgcttatagaccatttaacattaagatgataggtctaaaa-gtgtttatgacatcaaacatgattactta 32367551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 40136938 - 40137017
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatacat 558  Q
    ||||||||| |||||||||||  | |||||||||||||||||||||| |||  ||||||||| | | |||||||||| ||||    
T  40136938 tagcccaccgaaattggcaccggg-agaatcaaacctgagaccttga-gaggagcacactccaaggtcccaagccaacacat 40137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 16843756 - 16843847
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||| |||||| |||||||| ||||    |||||| ||||||||| |||| ||||  |||||||||||||||| | ||||||||    
T  16843756 gaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacactcccaagacctacgccaatac 16843847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 26600870 - 26600925
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    ||||||||| || ||| |||||||||| ||| |||||||| ||||||||||||||||    
T  26600870 tttaacattaagatggtaggtccaaaa-gtgcttatgacatcaaacatgattactta 26600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 487 - 555
Target Start/End: Complemental strand, 33017306 - 33017238
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    ||||||||||||   |||||| |||||||||||||||||||  ||||||| ||| |  |||||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 497
Target Start/End: Complemental strand, 40872990 - 40872958
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcacc 497  Q
    ||||||||||| |||||||||||||||||||||    
T  40872990 aagaagttaaactagcccacctaaattggcacc 40872958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 14339725 - 14339633
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| ||||||||||||||| ||||||||| | | |||||| |||||||||| ||||||||  ||||||||||||  |||||||||||||    
T  14339725 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaatac 14339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 274 - 445
Target Start/End: Complemental strand, 10856473 - 10856309
Alignment:
Q  274 ttttaaattggtcctttaggtc-gtaaaagtgaacgagttagtccttcatttttatcttgcaacaaattgatctctttcttcatccaactttgttataaa 372  Q
    ||||||||||||| |||  ||| |||||||| ||| ||||||||||| | |||||| ||| | ||||| |||| |||| |||||||||||| |||| |||    
T  10856473 ttttaaattggtcttttgtgtcagtaaaagtaaacaagttagtcctttaattttatattgaatcaaatggatcccttttttcatccaacttcgttaaaaa 10856374  T
Q  373 gtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
           | |||| |||||||||||| ||||||||||||||| | |||||||| |||||||||| ||||||||    
T  10856373 -------acgaccatttaacattgag-tggaaggtccaaaaactatttatgaccccaaacatgaatacttaca 10856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 47810706 - 47810818
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||||||||| |||||||| |||||||||||    ||||||||||| ||||||||| ||||  |||||||||||||||| ||||||||| || ||      
T  47810706 gaagaagttaaat-agcccacccaaattggcaccggagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccaga 47810804  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  47810805 ccaacccaagtggg 47810818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 576
Target Start/End: Original strand, 27093345 - 27093435
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    ||||||||||||   ||||||||||||||||||||||||||  |||||||||||||  ||||||||||| ||  | |||||||||||||||    
T  27093345 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtggg 27093435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 538
Target Start/End: Complemental strand, 44069873 - 44069799
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    ||||||| |||| |||||||||||||||||||||    ||||||||||||||||||||||||||  |||||||||    
T  44069873 gaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 553
Target Start/End: Complemental strand, 54990817 - 54990728
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    ||||||| ||||||||||||||||||||| || | || |||||| |||||||||||||||||||  |||| |||| | | ||||||||||    
T  54990817 gaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 17549939 - 17549876
Alignment:
Q  387 tttaacattgaggtggaaggtccaaa-aagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||||| | ||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  17549939 tttaacttagaggtggaaggtccaaagaagtttttatgacaccaaacgtgattacttacataca 17549876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 10445100 - 10445190
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaat 554  Q
    ||||||| |||||||||||||  ||||| ||||||   |||||| |||||||||||| ||||||  ||||||||||| | |||||||||||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 29491152 - 29491090
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    ||||||||||| |||||| || ||||||||| ||| |||||||||| ||||||||||||||||    
T  29491152 tttaacattgaagtggaatgtacaaaaagtggttacgacaccaaacgtgattacttacataca 29491090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 8853760 - 8853853
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaataca 557  Q
    ||||||||||||||| |||||| |||||||||||||| || ||| ||| ||||||||  |||||  ||| ||||||| | ||||||| ||||||    
T  8853760 gaagaagttaaattaacccacccaaattggcaccaaggaggatcgaacatgagacctcaaggaggagcatactcccatgtcccaagctaataca 8853853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 8075088 - 8075180
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| ||||||| |||||||||||  ||||||||||||| |||||||| ||||    
T  8075088 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctatac 8075180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 540
Target Start/End: Original strand, 52769944 - 52770020
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| ||||||||||||||||||||| ||| ||  |||||| ||||||||||||  |||||  |||||||||||    
T  52769944 gaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactccca 52770020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Complemental strand, 46518705 - 46518630
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtggg 576  Q
    |||||||||||||| |||||||||||  |||||||||||   |||||||||||| ||  |||||||||||||||||    
T  46518705 agaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtggg 46518630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 30676359 - 30676417
Alignment:
Q  380 atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgatt 438  Q
    |||||| || |||||||| ||||||||| |||||||||||||||||| |||||| ||||    
T  30676359 atgaccattaaacattgaagtggaaggttcaaaaagtgtttatgacaacaaacacgatt 30676417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 8170787 - 8170695
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcacca-agcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| ||||||||||||||| |||||| ||||| || | |||| |||||||||||||||| ||  |||||||||||||   |||||||||||    
T  8170787 gaagaatttaaattagcccacccaaattgacaccagagga-aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaatac 8170695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 526
Target Start/End: Complemental strand, 17035100 - 17035039
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgagga 526  Q
    ||||||||||||||| ||||| ||||||  ||| || |||||| ||||||||||||||||||    
T  17035100 aagaagttaaattagtccacccaaattgataccgaggagaatcgaacctgagaccttgagga 17035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 30311398 - 30311345
Alignment:
Q  487 aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||||||||||  |||||| |||||||||||||||||||  |||||||||||    
T  30311398 aaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactccca 30311345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 4222255 - 4222143
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    ||||||||||| || | ||||||||||| |||||   |||||| ||||| |||| ||||||||  |||||||||||   |||||||||||| ||  | ||    
T  4222255 aagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagc 4222156  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  4222155 caacccaagtggg 4222143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 556
Target Start/End: Original strand, 32651403 - 32651491
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||||| ||||||| |||||||| ||| |   |||||| || |||||| |||||||||  ||||||||||| | |||||||||||||    
T  32651403 aagttaaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatac 32651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 540
Target Start/End: Complemental strand, 33899721 - 33899653
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||||| |||| |||||| ||||||  |||||| |||||||||||| ||||||  |||||||||||    
T  33899721 taaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 10498754 - 10498719
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10498754 gagcttagctcagttggtatggacaatgcataatat 10498719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 540
Target Start/End: Complemental strand, 11612413 - 11612338
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    |||||| |||||||| | |||||||||||||||  | || ||| ||||||||||||| |||||  |||||||||||    
T  11612413 aagaagctaaattagtcgacctaaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactccca 11612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 538
Target Start/End: Complemental strand, 19716309 - 19716238
Alignment:
Q  467 gaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    |||| |||||||||||||| |||||| ||||  | |||||| |||| ||||||||||||||  |||||||||    
T  19716309 gaagctaaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactcc 19716238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 449
Target Start/End: Complemental strand, 20524620 - 20524581
Alignment:
Q  410 aaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  20524620 aaaaagtgtttatgacacataacatgattacttacataca 20524581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 24428532 - 24428497
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  24428532 gagcttagctcagttggtatggacaatgcataatat 24428497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 29631188 - 29631223
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29631188 gagcttagctcagttggtatggacaatgcataatat 29631223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 53996301 - 53996336
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  53996301 gagcttagctcagttggtatggacaatgcataatat 53996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 353136 - 353182
Alignment:
Q  482 cacctaaattggcaccaagcagaatcaaacctgagaccttgaggaga 528  Q
    |||||| |||||||||||  |||||| ||||||||||||||||||||    
T  353136 cacctagattggcaccaatgagaatcgaacctgagaccttgaggaga 353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 662
Target Start/End: Complemental strand, 977999 - 977965
Alignment:
Q  628 agcttagctcggttggtatggacaatgcataatat 662  Q
    |||||||||| ||||||||||||||||||||||||    
T  977999 agcttagctcagttggtatggacaatgcataatat 977965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 540
Target Start/End: Original strand, 17108897 - 17108935
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  17108897 agaatcaaacctgagaccttgaggaggagcacactccca 17108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 581
Target Start/End: Original strand, 26871469 - 26871583
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaa 566  Q
    |||||||||||||||||| |||||||||    | |||||||||||| |||| ||||||||  | | ||||| | | |||||||||| | || || |||||    
T  26871469 aagttaaattagcccacccaaattggcattgggtagaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaa 26871568  T
Q  567 cccaagtgggattta 581  Q
    |||||||||| ||||    
T  26871569 cccaagtgggtttta 26871583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 632 - 662
Target Start/End: Original strand, 39779031 - 39779061
Alignment:
Q  632 tagctcggttggtatggacaatgcataatat 662  Q
    |||||||||||||||||||||||||||||||    
T  39779031 tagctcggttggtatggacaatgcataatat 39779061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 661
Target Start/End: Complemental strand, 47313431 - 47313397
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataata 661  Q
    ||||||||||| |||||||||||||||||||||||    
T  47313431 gagcttagctcagttggtatggacaatgcataata 47313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 330 - 439
Target Start/End: Original strand, 49292115 - 49292224
Alignment:
Q  330 ttgcaacaaattgatctctttcttcatccaactttgttataaagtgcttaatgac-cttttaacattgaggtggaaggtccaaaaagtgtttatgacacc 428  Q
    ||||||||| |||||| |||| ||| || |||||||||  |||||||||||  |  | |||||||||||||| ||||||| |||||  |||||| |||||    
T  49292115 ttgcaacaagttgatc-cttttttcttctaactttgttgaaaagtgcttaagcaatcatttaacattgaggtagaaggtctaaaaaccgtttataacacc 49292213  T
Q  429 aaacatgatta 439  Q
    |||||| ||||    
T  49292214 aaacataatta 49292224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 542
Target Start/End: Original strand, 49397502 - 49397580
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaag 542  Q
    ||||||| |||||||| |||||||||||| || | |  | |||| ||| |||||||| ||||||| |||||||||||||    
T  49397502 gaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactcccaag 49397580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 8051329 - 8051216
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||  |||||| |||||||||||||     ||||| ||| |||||||| ||||||| ||| ||| ||| | |||||||||||| || || |    
T  8051329 gaagaagctaaacgagcccaactaaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccagg 8051230  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  8051229 ccaacccaagtggg 8051216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 621 - 662
Target Start/End: Complemental strand, 9321470 - 9321429
Alignment:
Q  621 atttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||| ||||||||||| |||||| |||||||||||||||||    
T  9321470 atttgtgagcttagctcagttggtttggacaatgcataatat 9321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Complemental strand, 27259238 - 27259185
Alignment:
Q  502 agaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata 555  Q
    |||||||||||||| |||| ||||||  ||||||||||| | ||||||||||||    
T  27259238 agaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 33282675 - 33282739
Alignment:
Q  382 gaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttacataca 449  Q
    |||| ||| |||||||||||| |||||| |||   || ||||||| ||||||||||||||||||||||    
T  33282675 gaccatttgacattgaggtggtaggtccgaaa---gtatatgacatcaaacatgattacttacataca 33282739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 556
Target Start/End: Original strand, 47236935 - 47237024
Alignment:
Q  467 gaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||| ||||| |||||||| |||||||||||  | |||||| ||| ||||||||||| |||  ||||||||||  | ||||| |||||||    
T  47236935 gaagctaaataagcccacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaatac 47237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 627 - 660
Target Start/End: Original strand, 50037313 - 50037346
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataat 660  Q
    ||||||||||| ||||||||||||||||||||||    
T  50037313 gagcttagctcagttggtatggacaatgcataat 50037346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Complemental strand, 2667977 - 2667885
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||| |||||||||||||||| ||| |   | |||| |||||||||||| |||||   |||||||||||   |||||||||||||    
T  2667977 gaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatac 2667885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 540
Target Start/End: Original strand, 4844472 - 4844548
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||||||||||||  |||||||||||    |||||| | |||||||||| ||||||  |||||||||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactccca 4844548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 540
Target Start/End: Original strand, 4870168 - 4870244
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||||||||||||  |||||||||||    |||||| | |||||||||| ||||||  |||||||||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactccca 4870244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 538
Target Start/End: Complemental strand, 14186748 - 14186688
Alignment:
Q  478 agcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcc 538  Q
    ||||||||||||||| ||||    |||||| |||||||||||||||||||  |||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 14827527 - 14827559
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  14827527 gagcttagctcagttggtatggacaatgcataa 14827559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 15034459 - 15034399
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgag 524  Q
    |||||||  |||||||| |||| |||||||||||| | |||||  ||||||||||||||||    
T  15034459 gaagaagcaaaattagctcaccgaaattggcaccagggagaattgaacctgagaccttgag 15034399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 15048023 - 15048135
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    ||||||||||| || ||| |  ||||||||||||   | |||| |||||||||||||||||||  ||||| |||||   |||||||| ||| ||| | ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  15048123 caacccaagtggg 15048135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 19468448 - 19468488
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||| ||| ||||||||||||||||||||||||    
T  19468448 tttgtgagcttaactcagttggtatggacaatgcataatat 19468488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 21506817 - 21506785
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  21506817 gagcttagctcagttggtatggacaatgcataa 21506785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 25340983 - 25340951
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  25340983 gagcttagctcagttggtatggacaatgcataa 25340951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 630 - 662
Target Start/End: Complemental strand, 25441556 - 25441524
Alignment:
Q  630 cttagctcggttggtatggacaatgcataatat 662  Q
    |||||||| ||||||||||||||||||||||||    
T  25441556 cttagctcagttggtatggacaatgcataatat 25441524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 549
Target Start/End: Complemental strand, 30715855 - 30715772
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaag 549  Q
    |||||| |||| ||||||| | ||||||||||  || |||||| ||||||| || ||||||||  ||||||||||||| ||||||    
T  30715855 aagaagctaaactagcccatccaaattggcacggag-agaatcgaacctgaaacattgaggaggagcacactcccaagtcccaag 30715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 32629082 - 32629114
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  32629082 gagcttagctcagttggtatggacaatgcataa 32629114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 32836175 - 32836207
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  32836175 gagcttagctcagttggtatggacaatgcataa 32836207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 36720495 - 36720383
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| ||||  ||||||||||||||| ||| |   |||||| ||||||| |||| ||||||  |||||||||||   |||||||||||| || ||  |    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  36720395 caacccaagtggg 36720383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 39481143 - 39481175
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  39481143 gagcttagctcagttggtatggacaatgcataa 39481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 524
Target Start/End: Complemental strand, 40777119 - 40777067
Alignment:
Q  472 taaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgag 524  Q
    |||| ||||||||| |||||||||| |   |||||||||||||||||||||||    
T  40777119 taaactagcccaccgaaattggcactagagagaatcaaacctgagaccttgag 40777067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 44579638 - 44579670
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  44579638 gagcttagctcagttggtatggacaatgcataa 44579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 51903839 - 51903931
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||  |||||| ||||    |||||| |||||||||||  ||||||  |||||||||||   |||||||||||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatac 51903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 15284 - 15397
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggca-ccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcat 561  Q
    ||||||| |||||||||||||||||||||||| || || |||||| |||||||||||| ||||||  ||||||||||| | |||||||||||| || ||     
T  15284 gaagaagctaaattagcccacctaaattggcatccgag-agaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccag 15382  T
Q  562 gccaacccaagtggg 576  Q
     ||||||||||||||    
T  15383 accaacccaagtggg 15397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 370 - 443
Target Start/End: Complemental strand, 18130673 - 18130600
Alignment:
Q  370 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||||||||| ||||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  18130673 aaagtgcttacatgacctcttaacattgaggtggtag-tccaaaaagtgcttatgacaccaaacatgattactta 18130600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 21418585 - 21418472
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| ||||||||||||||| ||||||||| | | |||||| ||| |||||| | ||||||  ||||||||||||| |||||||||||| || || |    
T  21418585 gaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccagg 21418486  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||| ||||    
T  21418485 ccaacccaactggg 21418472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 23888338 - 23888264
Alignment:
Q  370 aaagtgctta-atgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttac 444  Q
    |||||||||| ||||||| ||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||    
T  23888338 aaagtgcttacatgacctcttaacattgaggtgctag-tccaaaaagtgcttatgacaccaaacatgattacttac 23888264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 465 - 576
Target Start/End: Complemental strand, 33549218 - 33549106
Alignment:
Q  465 aagaagttaaattagcccacctaaattggca-ccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    |||||| ||||||||| |||||||||||||| || || |||||| |||||||||||| ||||||  ||||||||||| | |||||||||||| || ||      
T  33549218 aagaagctaaattagctcacctaaattggcatccgag-agaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaga 33549120  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  33549119 ccaacccaagtggg 33549106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 576
Target Start/End: Original strand, 14278086 - 14278184
Alignment:
Q  478 agcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatacatcatgccaacccaagtggg 576  Q
    |||||||| |||||| |||||   |||||||||||||||||||| |||||  || |||||||| | || ||||||||||| || ||||||||| |||||    
T  14278086 agcccacccaaattgacaccagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatacaccaggccaacccatgtggg 14278184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 11103396 - 11103489
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaataca 557  Q
    ||||||||||||||||| ||| |||||||||||||   |||||| || | |||||||| |||||  ||||||| ||||| ||||||| ||||||    
T  11103396 gaagaagttaaattagctcacttaaattggcaccagagagaatcgaatcggagaccttaaggaggagcacactaccaagtcccaagcgaataca 11103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 24641151 - 24641264
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||||||||||||||||||||||||||||   || |||||| ||||| | |||| ||||||  |||||||||||   |||||| ||||| || || |    
T  24641151 gaagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaag 24641250  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||| ||||    
T  24641251 ccaacccaaatggg 24641264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 574
Target Start/End: Original strand, 10338174 - 10338246
Alignment:
Q  503 gaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaacccaagtg 574  Q
    ||||| |||||||||||||||||||  ||||||||| | | |||||||||||| || ||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 556
Target Start/End: Original strand, 31622952 - 31623044
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    ||||||| |||||||||||||| |||||| ||||     || ||||||||||||||| ||||||  ||||||||||| | |||||||||||||    
T  31622952 gaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 31623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 11751788 - 11751878
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| ||||||| |||| |||||| |||  |||| ||||||||| || ||| |||||||||| |||||||||||| |||||| |||||||||    
T  11751788 ttcagccaacttcgttaaaaagtgtttatagaccatttaacattaagatggtaggtccaaaa-gtgtttatgacatcaaacacgattactta 11751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 20863477 - 20863401
Alignment:
Q  477 tagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaa 553  Q
    ||||||||| |||||||||  |   ||||||||| ||||||||||||||||  ||||||||| ||| ||||||||||    
T  20863477 tagcccacccaaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 556
Target Start/End: Complemental strand, 6385976 - 6385885
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||| ||||| |||||    |||||| ||||||||||||| |||||  ||||| ||||| | |||||| ||||||    
T  6385976 aagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatac 6385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 13441171 - 13441116
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagacct 520  Q
    |||||||||||||||||||| |||||||||||  || |||||| ||| ||||||||    
T  13441171 aagaagttaaattagcccacttaaattggcactgagaagaatcgaacttgagacct 13441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 20744140 - 20744175
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20744140 gagcttagctcagttggtatggacaatgcataatat 20744175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 32053790 - 32053825
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32053790 gagcttagctcagttggtatggacaatgcataatat 32053825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 550
Target Start/End: Complemental strand, 20213156 - 20213070
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagc 550  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| |||||||||| ||||||||  ||||||||||| | |||||||    
T  20213156 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 550
Target Start/End: Complemental strand, 22107179 - 22107093
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagc 550  Q
    ||||||| |||||||||||||| |||||| ||| |    ||||| |||||||||| ||||||||  ||||||||||| | |||||||    
T  22107179 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 576
Target Start/End: Complemental strand, 30127512 - 30127402
Alignment:
Q  467 gaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgcca 565  Q
    |||| ||||||| || |||||||||||||||    |||||| |||||||||||| || |||  |||||||||||   |||||||||||| || ||  |||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagacca 30127413  T
Q  566 acccaagtggg 576  Q
    |||||||||||    
T  30127412 acccaagtggg 30127402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 630 - 659
Target Start/End: Original strand, 5172125 - 5172154
Alignment:
Q  630 cttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||||||||||||||||||||||    
T  5172125 cttagctcggttggtatggacaatgcataa 5172154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Original strand, 6758383 - 6758496
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    ||||||| |||||| |||||||||||||| |||||   |||||| | | |||||||| |||| |  ||||||||||||  || ||||||||| || || |    
T  6758383 gaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccagg 6758482  T
Q  563 ccaacccaagtggg 576  Q
    ||||| ||||||||    
T  6758483 ccaacacaagtggg 6758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 557
Target Start/End: Complemental strand, 13661635 - 13661542
Alignment:
Q  465 aagaagttaaattagcccacct-aaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaataca 557  Q
    |||||| ||||||||| || || |||||| ||||||  |  |||||||||||||||| ||||||  |||||||||||||   ||||||||||||    
T  13661635 aagaagctaaattagctcatctcaaattgacaccaatgaagatcaaacctgagacctcgaggaggagcacactcccaagtgtcaagccaataca 13661542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 541
Target Start/End: Original strand, 18562599 - 18562676
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaa 541  Q
    ||||||| |||||||||||||||||||||| ||   | |||||||||||||| | ||  |||||  ||||||||||||    
T  18562599 gaagaagctaaattagcccacctaaattggtacttgggagaatcaaacctgaaatctcaaggaggagcacactcccaa 18562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 622 - 662
Target Start/End: Original strand, 361751 - 361791
Alignment:
Q  622 tttgagagcttagctcggttggtatggacaatgcataatat 662  Q
    |||| ||||||| ||| ||||||||||||||||||||||||    
T  361751 tttgtgagcttaactcagttggtatggacaatgcataatat 361791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 4494930 - 4494898
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  4494930 gagcttagctcagttggtatggacaatgcataa 4494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 496
Target Start/End: Complemental strand, 18263955 - 18263923
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcac 496  Q
    ||||||| |||||||||||||||||||||||||    
T  18263955 gaagaagctaaattagcccacctaaattggcac 18263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 465 - 576
Target Start/End: Original strand, 24333987 - 24334099
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgc 563  Q
    |||||| |||| ||||||||| |||||||||||    |||||  |||||||||||||||||||  ||| ||| | | | |||||||||| | ||||  ||    
T  24333987 aagaagctaaactagcccacccaaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggc 24334086  T
Q  564 caacccaagtggg 576  Q
    |||||||||||||    
T  24334087 caacccaagtggg 24334099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 26320622 - 26320590
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  26320622 gagcttagctcagttggtatggacaatgcataa 26320590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 465 - 556
Target Start/End: Original strand, 15739 - 15830
Alignment:
Q  465 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||||| |||||||||||||| |||||||||||  | |||||||||| |||||||||||||||  ||| ||||| ||  |||||||||||||    
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaatac 15830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 42625 - 42688
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggag 527  Q
    ||||||||||||||||||||||||||||| |||||   |||||| ||| ||||| |||||||||    
T  42625 gaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgaggag 42688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 508077 - 508167
Alignment:
Q  352 ttcatccaactttgttataaagtgcttaatgaccttttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattactta 443  Q
    |||| ||||||| |||| |||||| |||  |||| |||||| || || ||| ||||||||||| ||||||||||| ||||||||||||||||    
T  508077 ttcagccaacttcgttaaaaagtgtttatagaccatttaacgttaagatggtaggtccaaaaa-tgtttatgacatcaaacatgattactta 508167  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 39396 - 39338
Alignment:
Q  387 tttaacattgaggtggaaggtccaaaaagtgtttatgacaccaaacatgattacttaca 445  Q
    |||||| ||||||||| ||||| |||||||| |||| ||||||||||||||| ||||||    
T  39396 tttaacgttgaggtggcaggtcgaaaaagtgcttataacaccaaacatgattgcttaca 39338  T

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Target: scaffold1149 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 2334 - 2369
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2334 gagcttagctcggttggtagggacaatgcataatat 2369  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Original strand, 40000 - 40035
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataatat 662  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40000 gagcttagctcagttggtatggacaatgcataatat 40035  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 24168 - 24055
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatg 562  Q
    |||||||||||||||||||||  ||||||||| ||   | |||| ||||||| || | || |||  ||||||||| ||| |||||| ||||| ||| | |    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  563 ccaacccaagtggg 576  Q
    ||||||||||||||    
T  24068 ccaacccaagtggg 24055  T

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Target: scaffold0735 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 1530 - 1562
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  1530 gagcttagctcagttggtatggacaatgcataa 1562  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 631 - 659
Target Start/End: Original strand, 5419 - 5447
Alignment:
Q  631 ttagctcggttggtatggacaatgcataa 659  Q
    |||||||||||||||||||||||||||||    
T  5419 ttagctcggttggtatggacaatgcataa 5447  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 556
Target Start/End: Original strand, 25348 - 25400
Alignment:
Q  504 aatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaatac 556  Q
    |||| |||||||||||||||| ||  ||||||||||||| | |||||||||||    
T  25348 aatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaatac 25400  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 571
Target Start/End: Original strand, 43297 - 43401
Alignment:
Q  468 aagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactcccaagacccaagccaata-catcatgccaa 566  Q
    |||||||||||||||| | |||||| |||  |   ||||| ||| ||||||||| || ||   |||||||||||| |||||||||||| || ||||||||    
T  43297 aagttaaattagcccatccaaattgacactgaagggaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaataccaccatgccaa 43396  T
Q  567 cccaa 571  Q
    |||||    
T  43397 cccaa 43401  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 47300 - 47268
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  47300 gagcttagctcagttggtatggacaatgcataa 47268  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 185265 - 185297
Alignment:
Q  627 gagcttagctcggttggtatggacaatgcataa 659  Q
    ||||||||||| |||||||||||||||||||||    
T  185265 gagcttagctcagttggtatggacaatgcataa 185297  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 18413 - 18338
Alignment:
Q  464 gaagaagttaaattagcccacctaaattggcaccaagcagaatcaaacctgagaccttgaggagatgcacactccca 540  Q
    ||||||| |||||||||| ||  ||||||||||||   |||||||||||||| |||||||||||  ||||| |||||    
T  18413 gaagaagctaaattagcc-actcaaattggcaccagagagaatcaaacctgaaaccttgaggaggagcacaatccca 18338  T

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