View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3365_low_63 (Length: 283)
Name: NF3365_low_63
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3365_low_63 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 35104262 - 35104518
Alignment:
| Q |
14 |
atatgtgtggagacttcaaaattttgttcttggagagcatatattgactccatgccctgaaaatccaacgcctgtaaaggttaggacttcctcctcgtta |
113 |
Q |
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| T |
35104262 |
atatgtgtggagacttcaaaattttgttcttggagagcatatattgactccatgccctgaaaatccaacgcctgtaaaggttaggacttcctcctcgtta |
35104361 |
T |
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| Q |
114 |
agnnnnnnnaatttcttacaattaccacttccacagaagatatgtgtgaaatgctctgcttattttagtaggtctctcaatttgttacttcaacttccat |
213 |
Q |
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| T |
35104362 |
agtttttttaatttcttacaattaccgcttccacagaagatatgtgtgaaatgctctgcttattttagtaggtctctcaatttgttgcttcaacttccat |
35104461 |
T |
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| Q |
214 |
tttagtagg----tattagggtgttacttttttatatgcattttgagagagtgttgg |
266 |
Q |
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| T |
35104462 |
tttagtaggtctctattagggtgttacttttttatatgcattttgagagagtgttgg |
35104518 |
T |
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