View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3365_low_64 (Length: 266)
Name: NF3365_low_64
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3365_low_64 |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 43636852 - 43636600
Alignment:
| Q |
1 |
atggacaaaacatcttcatctctcaacttcaaggaaactgagctcagactaggcttacctggttgtgaatctcctgatagaaaatcagtttctgctgctg |
100 |
Q |
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| T |
43636852 |
atggacaaaacatcttcatctctcaacttcaaggaaactgagctcagactaggcttacctggttgtgaatctcctgatagaaaatcagtttctgctgctg |
43636753 |
T |
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| Q |
101 |
gtgctgttggtggagtctctttctttgccaacaaagatttgaagagcattaatgtttgttctcctttgaagaaccttgtagctagtgttggagctaaaag |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43636752 |
gtgctggtggtggagtctctttctttgccaacaaagatttgaagagcattaatgtttgttctcctttgaagaaccttgtagctagtgttggagctaaaag |
43636653 |
T |
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| Q |
201 |
aggtttctctgatgctattgatgagtcttctaagaaatggagtttttctatga |
253 |
Q |
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| T |
43636652 |
aggtttctctgatgctattgatgagtcttctaagaaatggagtttctctatga |
43636600 |
T |
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