View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3365_low_69 (Length: 260)
Name: NF3365_low_69
Description: NF3365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3365_low_69 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 30130357 - 30130112
Alignment:
| Q |
1 |
cttcatttatgaaagtacctatattaattgtagttaatggagttgttttgtgtgtcgagatacaataaataagagtgtattaatagtggaaaaatttaat |
100 |
Q |
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| T |
30130357 |
cttcatttacgaaagtacctatattaattgtagttaatggagttgttttgtgtgtcgagatacaataaataagagtgtattaatagtggaaaaatgtaat |
30130258 |
T |
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| Q |
101 |
tgatgtttaattgttaatctaaaatgacaaattatactggacaagtgat--agtgaatggaatagttttttggtttgtttgaattttcttgtcagggaaa |
198 |
Q |
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| T |
30130257 |
taatgtttaattgttaatctaaaatgacaaattatactggacgagtgattaagtgaatggaatagttttttggtttgtttgaattttcttgtcagggaaa |
30130158 |
T |
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| Q |
199 |
ctgaaatattaaaattttgcaggtgctactgtctatttgttctctg |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30130157 |
ctgaaatattaaaattttgcaggtgctactgtctatttgttctctg |
30130112 |
T |
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