View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367-Insertion-5 (Length: 352)
Name: NF3367-Insertion-5
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367-Insertion-5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 7 - 352
Target Start/End: Original strand, 14927868 - 14928212
Alignment:
| Q |
7 |
agttggttctacgcattcgcagaagggatctataccaggtcagccatacagtgaagtacctgataaatttttggcctattcttattttggtgacactatt |
106 |
Q |
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| T |
14927868 |
agttggttctacgcattcgcagaagggatctataccaggtcagccatacagtgaagtaactgataaatttttgacctattcttattttggtgacactatt |
14927967 |
T |
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| Q |
107 |
tctgataggtagagagaatttaatatttgtgcagacagtaatgataatacataaataccatgtgctgacaaattgacacaaacatttactccattttgta |
206 |
Q |
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| T |
14927968 |
tctgataggtagagagaatttaatatttgtgcaaacagtaatgata-tacataaataccatgtgctgacaaattgacacaaacatttactccattttgta |
14928066 |
T |
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| Q |
207 |
gttatgcaatgaattttctgttccaaaggaaaaactagacaacttcaaaagcatcacaccccaagacattgtttgttcccaggttgaaaaaactatagta |
306 |
Q |
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| T |
14928067 |
gttatgcaatgaattttctgttccaaaggaaaaactagacaacttcaaaagcatcacaccccaagacattgtctgttcccaggttgaaaaaactatagta |
14928166 |
T |
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| Q |
307 |
ataagtgtccttttcattcagtatatgtacatgcctgcctatcttc |
352 |
Q |
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| T |
14928167 |
ataagtgtccttttcattcagcatatgtacatgcctgcctatcttc |
14928212 |
T |
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