View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367-Insertion-6 (Length: 231)
Name: NF3367-Insertion-6
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367-Insertion-6 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 8 - 227
Target Start/End: Complemental strand, 11228075 - 11227856
Alignment:
| Q |
8 |
gtatctaccaatagagacaattaaaggttagtcaatatgttgtaacaagataaccaccaaataaattaatatttataacatatattaaatttttaccttt |
107 |
Q |
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| T |
11228075 |
gtatctaccaataaagacaattaaaggttagtcaatatgttgtaacaagataaccaccaaataaattaatatttataacatatattaaatttttaccttt |
11227976 |
T |
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| Q |
108 |
aactttgacaagtagaggctcgttttgattttgtggctgaacttcgtttgaagttaagggagggtcaaacatgtcatcatcgtcaaatatatcctcatgg |
207 |
Q |
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| T |
11227975 |
aacattgacaagtagaggctcattttgattttgtggctgaacttcgtttgaagttaagggagggtcaaacatgtcatcatcgtcaaatatgtcctcatgg |
11227876 |
T |
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| Q |
208 |
gatggactactagtcatact |
227 |
Q |
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|||||||||||||||||||| |
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| T |
11227875 |
gatggactactagtcatact |
11227856 |
T |
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