View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3367-Insertion-7 (Length: 201)
Name: NF3367-Insertion-7
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367-Insertion-7 |
 | |
|
| [»] chr6 (31 HSPs) |
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|
| [»] scaffold0475 (1 HSPs) |
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|
| [»] scaffold0288 (1 HSPs) |
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| [»] scaffold0199 (1 HSPs) |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-106; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 3173394 - 3173587
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173394 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
3173493 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173494 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
3173587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 4488934 - 4488741
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |
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|
| T |
4488934 |
aaaccatcaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagtagtt |
4488835 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| | ||||||||||||||||||| |
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|
| T |
4488834 |
ttcctagtttcaacaatgcattgatatggccttgaactggaaatggtgttaacactgcatgtggctttctctcttcaaagttactcatctttga |
4488741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 4482256 - 4482449
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4482256 |
aaaccatcaaaggcttttggaccccttgattttagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagtagtt |
4482355 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
|| ||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| | | ||||||||||||||||||||| |
|
|
| T |
4482356 |
ttcctattttcaacaatgcattgatatggccttgagctggaaatggagtcaacactgcatgtggttttttttctgcaaagttactcatctttga |
4482449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 4575846 - 4576033
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
4575846 |
aaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagcagtt |
4575945 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | ||||||||||||| |
|
|
| T |
4575946 |
ttgctattttcaacaatgcattgatatggccttgaactggaaatggagttaacactgcatgtggctttttctcttcaaagttactcat |
4576033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 4558516 - 4558683
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||| |||| |
|
|
| T |
4558516 |
aaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaatcctctaaggtgaagaagtt |
4558615 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtttt |
175 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
4558616 |
ttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt |
4558683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 4507302 - 4507495
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| || |||||| || | |
|
|
| T |
4507302 |
aaaccatcaaaggcattttcacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctcgaaggtgaagaagct |
4507401 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
| |||||||| ||||||| |||||||||||||||| |||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4507402 |
tagctagtttgaacaatggattgatatggccttgagttggatatggaatcaacacagcatgtggttttctctttgcaaaattactcatctttga |
4507495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 4627541 - 4627732
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |
|
|
| T |
4627541 |
aaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagtaatt |
4627640 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtt---ttctctttgcaaagttactcatc |
196 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||| ||||| | ||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
4627641 |
ttgctagtatcaacaatggattgatatggccttgaagtggaaatggaatcaacacagcatgtggcttgattctctttgcaaagttactcatc |
4627732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 4572357 - 4572524
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| | || |
|
|
| T |
4572357 |
aaaccatcaaaggcattttgacctcttgacttgagcaaccgtttgtgattgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaaatt |
4572456 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtttt |
175 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
4572457 |
ttgctagttgcaacaatggattgatatggccttgaactggatatgggattaacacagcatgtggtttt |
4572524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 4618692 - 4618873
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || | |
|
|
| T |
4618692 |
aaaccatcaaaagcctttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagaagct |
4618791 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||||||||| | | ||| ||||||||||||| ||||||||||| |
|
|
| T |
4618792 |
ttgctagtttgaacaatggattgatatggccttgaactggatatggaatcatcacaacatgtggttttctgtttgcaaagtt |
4618873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4517731 - 4517894
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
4517731 |
aaaccatcaaaggcttttggacctcttgatttgagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaagatgaagaagtt |
4517830 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg |
171 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
4517831 |
ttgctagttttaacaacggattgatatggccttgaagtggatatggagttatcactgcatgtgg |
4517894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 4612455 - 4612288
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| || || ||||||||||||||||||| |||||| |||| |
|
|
| T |
4612455 |
aaaccaacaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttgacgaatgttatgtgaaagcctctaaggtgaagaagtt |
4612356 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtttt |
175 |
Q |
| |
|
|||||||||| | |||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4612355 |
ttgctagtttgattaatggattgatatggccttgaactggatatggaattaacactgcatgtggtttt |
4612288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4603510 - 4603682
Alignment:
| Q |
17 |
aaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtt |
116 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
4603510 |
aaggcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaaggtgaaatagttttgctagtt |
4603609 |
T |
|
| Q |
117 |
tcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||||||| | ||||| |||||| ||||||| ||||||||||| |
|
|
| T |
4603610 |
tcaacattggattgatatggccttgaagtggatatggaatcaacacagcatgttgttttctgtttgcaaagtt |
4603682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 4513716 - 4513529
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4513716 |
aaaccatcaaaagcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagtagtt |
4513617 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
|||||| | | |||| || ||||||||||||||||| |||||||||| | ||||| |||||||||||||| ||||| | |||||||| |
|
|
| T |
4513616 |
ttgctaatctgaacattggattgatatggccttgaagtggatatggaatcaacacagcatgtggttttctgcttgcagaattactcat |
4513529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 8 - 201
Target Start/End: Original strand, 4594401 - 4594594
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||| |
|
|
| T |
4594401 |
aaaccatctaaggcatttggacctcttgatttgagcaaacgtttatgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagaagtt |
4594500 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
|||| ||||| ||||||| ||| ||||| ||||||| |||| |||| | ||||| |||||||||||||| ||||||||||| | ||||||||| |
|
|
| T |
4594501 |
ttgcaagtttgaacaatggatttatatgtccttgaagtggagctggaatcaacacagcatgtggttttctgtttgcaaagtttcccatctttga |
4594594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 4587027 - 4587190
Alignment:
| Q |
12 |
catcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgc |
111 |
Q |
| |
|
||||||||||||||||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| ||||| || |
|
|
| T |
4587027 |
catcaaaggcatttggagctcttgacttaagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaatcctcgaaggtgaagaagtttagc |
4587126 |
T |
|
| Q |
112 |
tagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggtttt |
175 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||| |||||| |
|
|
| T |
4587127 |
tagtttcaacaatggattgatatggccttgaactggagatgggattaacacagcatgaggtttt |
4587190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 4265794 - 4265607
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||| | ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || | |
|
|
| T |
4265794 |
aaaccatcaagagaatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagct |
4265695 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
|| |||| || ||||||||||||||||||||||||| |||| |||| | ||||| |||||||| ||| ||||||||| |||||||| |
|
|
| T |
4265694 |
ttcctagattgaacaatgcattgatatggccttgaaatggagctggaatcaacacagcatgtggctttggctttgcaaaattactcat |
4265607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 4471346 - 4471498
Alignment:
| Q |
49 |
tttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgatatggccttgaactgga |
148 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4471346 |
tttgtgattgtattcagtgttgacaaacgttatgtgaaagcctctaaggtgaagaagctttgctagtttcaacaatgcattgatatggccttgagctgga |
4471445 |
T |
|
| Q |
149 |
tatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
||||| | || || |||||||| ||| |||||||||| |||||||| ||||| |
|
|
| T |
4471446 |
catggaatcaatacagcatgtggctttgtctttgcaaaattactcatatttga |
4471498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 4462623 - 4462785
Alignment:
| Q |
33 |
ttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgat |
132 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4462623 |
ttgaattgagcaagcaattgtgattgtattcagtgttgacaaaggttatgtgaaaacctctaaggtgaagtagttttcctagtttcaacaatgcattgat |
4462722 |
T |
|
| Q |
133 |
atggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
||||||||| |||| ||||| | ||||| |||||||| ||| |||||||||| |||||||| |
|
|
| T |
4462723 |
atggccttgggatggacatggaatcaacacagcatgtggctttgtctttgcaaaattactcat |
4462785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 4562053 - 4562204
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggtt-atgtgaaagcctctaaagtgaagtagt |
106 |
Q |
| |
|
|||||||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| | |||||| ||| |
|
|
| T |
4562053 |
aaaccatcaaaggcattttcacctcttgattt-agcaaacgtttgtgattgtattcagtgttaacaaaggtttatgtgaaagcctcttaggtgaagcagt |
4562151 |
T |
|
| Q |
107 |
tttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaa |
159 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
4562152 |
tttgctattttcaacaatgcattgatatgaccttgaactggaaatggagttaa |
4562204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 4258913 - 4258750
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||| ||||||| ||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||| || | |
|
|
| T |
4258913 |
aaaccatcaacggcattttcacctcttgatttgagcaaacgtttgtgattatattcagtgttgacaaaggttatgtgaaaacctttaaagtgaagaagct |
4258814 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg |
171 |
Q |
| |
|
| |||||||| ||||||| |||||||||||||||| ||||||||||| | ||||| |||||||| |
|
|
| T |
4258813 |
tagctagtttgaacaatggattgatatggccttgagctggatatggaatcaacacagcatgtgg |
4258750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 4565421 - 4565598
Alignment:
| Q |
9 |
aaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttt |
108 |
Q |
| |
|
||||||| |||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||| |
|
|
| T |
4565421 |
aaccatctaaggcatttggacctcttgattttagcaatcgtttatgattgtattcagtgttgacaaaggttatatgaaatcctctaaggtgaagaagttt |
4565520 |
T |
|
| Q |
109 |
tgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaa |
186 |
Q |
| |
|
||| ||||| ||||||| ||| ||||| ||||||| |||| |||| | ||||| |||||||||||||| |||||||| |
|
|
| T |
4565521 |
tgcaagtttgaacaatggatttatatgtccttgaaatggagctggaatcaacacagcatgtggttttctgtttgcaaa |
4565598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 4569465 - 4569611
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
4569465 |
aaaccatcaaaggcttttggacctcttgatttgagcaaatgtttgtgatt----tcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagtt |
4569560 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagtta |
158 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
4569561 |
ttgctagtttcaataatggattgatatggccttgaagtggatatggagtta |
4569611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4581405 - 4581568
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||| || |||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || | |
|
|
| T |
4581405 |
aaaccatcaaacgcttttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagct |
4581504 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg |
171 |
Q |
| |
|
|||||||| | | |||| | ||||||| ||||||| |||||||||| | |||||||||||||| |
|
|
| T |
4581505 |
ttgctagtgttattaatggagtgatatgtccttgaagtggatatggaatcaacactgcatgtgg |
4581568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4623698 - 4623861
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||| || ||| || | |
|
|
| T |
4623698 |
aaaccatcaaaggcctttggacctcttgatttgagcaagcgtttgtgattgtattcggtgtgaccaaaggttatgtgaaagcctttaaggtaaagaagct |
4623797 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg |
171 |
Q |
| |
|
|||||||||| ||||||| ||||||||| |||||||||||||||| | | ||||| |||||||| |
|
|
| T |
4623798 |
ttgctagtttgaacaatggattgatatgaccttgaactggatatgcaatcaacacagcatgtgg |
4623861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 4497899 - 4497789
Alignment:
| Q |
91 |
tctaaagtgaagtagttttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtta |
190 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| |||||||||||||| || |||| |||||||||||||||||||||| ||| ||| | |||||||| |
|
|
| T |
4497899 |
tctaaggtgaagtaattttcctagtttcaacaatggattgatatggccttaaattggaaatggagttaacactgcatgtggctttttctcttcaaagtta |
4497800 |
T |
|
| Q |
191 |
ctcatctttga |
201 |
Q |
| |
|
||||||||||| |
|
|
| T |
4497799 |
ctcatctttga |
4497789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 4503030 - 4502943
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaa |
95 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
4503030 |
aaaccatcaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaa |
4502943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 4255545 - 4255395
Alignment:
| Q |
9 |
aaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttt |
108 |
Q |
| |
|
||||||||||||| |||||||| |||||| |||||| ||||||||||||||||| ||||| |||||| ||| ||| ||||||| ||| |
|
|
| T |
4255545 |
aaccatcaaaggcttttggacctcttgattcgagcaagcgtttgtgattgtattcggtgttgacaaag------------cctttaagatgaagtaattt |
4255458 |
T |
|
| Q |
109 |
tgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtgg |
171 |
Q |
| |
|
||||||||| || ||| |||||||||||||||||||||||||||| | ||||| |||||||| |
|
|
| T |
4255457 |
tgctagtttgaataatagattgatatggccttgaactggatatggaatcaacacagcatgtgg |
4255395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 4599579 - 4599721
Alignment:
| Q |
33 |
ttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgat |
132 |
Q |
| |
|
||||||||||||| |||||||||||||| || ||||| || |||||||||| ||| ||||||| |||||| | ||||||||||| | ||| |||||| |
|
|
| T |
4599579 |
ttgatttgagcaagcgtttgtgattgtactcggtgttcacgaaggttatgtaaaatcctctaaggtgaagaatctttgctagtttgattaatagattgat |
4599678 |
T |
|
| Q |
133 |
atggccttgaactggatatggagttaacactgcatgtggtttt |
175 |
Q |
| |
|
|| ||||||| ||| ||||| | || ||||||||| ||||| |
|
|
| T |
4599679 |
atttccttgaattggtaatggaatcaatactgcatgtagtttt |
4599721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 4472612 - 4472684
Alignment:
| Q |
123 |
atgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
||||||||||||||||||| |||| ||||| | |||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
4472612 |
atgcattgatatggccttggggtggacatggaatcaacactgcatgtggttttgtcattgcaaaattactcat |
4472684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 4493401 - 4493465
Alignment:
| Q |
113 |
agtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttct |
177 |
Q |
| |
|
||||||| || |||||||||||| |||||| ||||| ||||| | |||||||||||||||||||| |
|
|
| T |
4493401 |
agtttcagcattgcattgatatgaccttgagctggaaatggaatcaacactgcatgtggttttct |
4493465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 4298235 - 4298174
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtt |
69 |
Q |
| |
|
||||||||||| || ||||||||| |||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
4298235 |
aaaccatcaaaagcttttggaccccttgattcgagcaggtgtttgtgattgtattcggtgtt |
4298174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 1282824 - 1283005
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
1282824 |
aaaccatctagggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtattaacaaaggttatgtaaaagcctctaaggtgaagtagtt |
1282923 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| ||||||||||| | ||||| |||||||||||| | ||||||||||| |
|
|
| T |
1282924 |
ttgctagtttgaacaatggattgatatggccttgagctggatatggaatcaacacagcatgtggttttgtgtttgcaaagtt |
1283005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 35776276 - 35776316
Alignment:
| Q |
47 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
87 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35776276 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35776316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 35842083 - 35842123
Alignment:
| Q |
47 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
87 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35842083 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35842123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 35854591 - 35854631
Alignment:
| Q |
47 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
87 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35854591 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35854631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 35869200 - 35869240
Alignment:
| Q |
47 |
cgtttgtgattgtattcagtgtttacaaaggttatgtgaaa |
87 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35869200 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35869240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 2215 - 2404
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| || | |
|
|
| T |
2215 |
aaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagct |
2314 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatct |
197 |
Q |
| |
|
|||||||||| || |||| |||||||||||||||||||||||||||| | ||||| |||||||||||| | |||||||| ||||||||| |
|
|
| T |
2315 |
ttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagcatgtggttttttgtttgcaaaactactcatct |
2404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 2188 - 2007
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| || | |
|
|
| T |
2188 |
aaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagct |
2089 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||||||||| | | ||| ||||||||||||| ||||||||||| |
|
|
| T |
2088 |
ttgctagtttgaacaatggattgatatggccttgaactggatatggaatcatcacaacatgtggttttctgtttgcaaagtt |
2007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 20862547 - 20862358
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
||||||||||||| |||||||| |||| || ||||| |||||||||||||||||||| || ||||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
20862547 |
aaaccatcaaagggtattggacccattgacttaagcaagcgtttgtgattgtattcagtattgacaaatgttatgtaaaagcctctaaggtgaagtagtt |
20862448 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatct |
197 |
Q |
| |
|
|||||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
20862447 |
ttgctagttttaacattggattgatatgaccttgaagtggatatggagttaacactgcatgtggttttttctcagcaaaattactcatct |
20862358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 1675912 - 1676093
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||||| |||| |
|
|
| T |
1675912 |
aaaccatccaaggcagttggacctcttgatttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagtt |
1676011 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| ||||||||||| | ||||| ||||||| |||||| ||||||||||| |
|
|
| T |
1676012 |
ttgctagtttgaacaatggattgatatggccttgagctggatatggaatgaacacagcatgtgattttctgtttgcaaagtt |
1676093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 1149 - 1330
Alignment:
| Q |
8 |
aaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagtt |
107 |
Q |
| |
|
|||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||| ||||| |||| |
|
|
| T |
1149 |
aaaccatccaaggcagttggacctcttgatttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagtt |
1248 |
T |
|
| Q |
108 |
ttgctagtttcaacaatgcattgatatggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagtt |
189 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| ||||||||||| | ||||| ||||||| |||||| ||||||||||| |
|
|
| T |
1249 |
ttgctagtttgaacaatggattgatatggccttgagctggatatggaatgaacacagcatgtgattttctgtttgcaaagtt |
1330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 1e-33; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 3088161 - 3088329
Alignment:
| Q |
33 |
ttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgat |
132 |
Q |
| |
|
||||||| ||||| || |||||||||||||| || || ||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||| ||| || |
|
|
| T |
3088161 |
ttgatttaagcaaacggttgtgattgtattcggtattgacaaaggttatgtgaaagcctttaaggtgaagaagttttgctagttttaacaatggatttat |
3088260 |
T |
|
| Q |
133 |
atggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcatctttga |
201 |
Q |
| |
|
||| ||||||| |||||||||| | ||||| |||||||| ||| | | |||||| |||||||||||| |
|
|
| T |
3088261 |
atgaccttgaagtggatatggaatcaacacagcatgtggctttttatcaacaaagtaactcatctttga |
3088329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 24104511 - 24104673
Alignment:
| Q |
33 |
ttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgat |
132 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| |||||| || ||| ||||||| |||||||||||||| |
|
|
| T |
24104511 |
ttgattcgagcaagcgtttgtgattgtattcggtgttcacgaaggttatgtgaaagcctctaaggtgaagaagctttcctagtttgaacaatgcattgat |
24104610 |
T |
|
| Q |
133 |
atggccttgaactggatatggagttaacactgcatgtggttttctctttgcaaagttactcat |
195 |
Q |
| |
|
||| ||||||| |||| |||| | ||||| ||||| || ||| |||| |||| |||||||| |
|
|
| T |
24104611 |
atgaccttgaaatggagctggaatcaacacagcatgcggctttggctttacaaaattactcat |
24104673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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