View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367-Insertion-8 (Length: 195)
Name: NF3367-Insertion-8
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367-Insertion-8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 44039220 - 44039409
Alignment:
| Q |
8 |
ttcttaactatgaagtatccttaactatataaacaaaaatactccgacccaatatcataccatcttcaacatctcttctagcatttat--nnnnnnnnnn |
105 |
Q |
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| T |
44039220 |
ttcttaactatgaagtatccttaactatataaacaaaaatactccgacccaatatcataccatcttcaacatctcttctagcatttataaaaaaaaaaaa |
44039319 |
T |
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| Q |
106 |
tcacattttctagcaaccaagcaatccttgtatcaacagtttaatttgagatcaccaagtttcgaatatggtgtgtaattcacttctccc |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44039320 |
tcacattttctagcaaccaagcaatccttgtatcaacagttgaatttgagatcaccaagtttcgaatatggtgtgtaattcacttctccc |
44039409 |
T |
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