View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367_high_7 (Length: 394)
Name: NF3367_high_7
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 377
Target Start/End: Complemental strand, 41105406 - 41105030
Alignment:
| Q |
1 |
gatgaagagagtgaaacagaaacaactgttcctgaagggttttttgcggttattgcaatgcaaggtgaagaaacaaagagatttgttcttgagttggatt |
100 |
Q |
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| T |
41105406 |
gatgaagagagtgaaacagaaacaactgttcctgaagggttttttgcggttattgcaatgcaaggtgaagaaacaaagagatttgttcttgagttggatt |
41105307 |
T |
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| Q |
101 |
acttaacaaatcctcatttcatgaaactattggagcaagctaaggatgagtatggttatcaacaaaagggtgctattgcattgccatgtaagcctcaaga |
200 |
Q |
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| T |
41105306 |
acttaagaaatcctcatttcatgaaactattggagcaagctaaggatgagtatggttatcaacaaaagggtgctattgcattgccatgtaagcctcaaga |
41105207 |
T |
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| Q |
201 |
acttcaaaagattatagagaatcgacatagtgatgctttataacacttcttctggattcaataatctataattagacacatttatgtatacagatagtgc |
300 |
Q |
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| T |
41105206 |
acttcaaaagattatagagaatcgacatagtgatgctttataacacttcttctggattcaacaatctatatttagacacatttatgtatacagatagtgc |
41105107 |
T |
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| Q |
301 |
aaaaactatcaatattctttttagtatataaacatcaatttgatttttacataggtaggcaattcaaacaagatagt |
377 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
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| T |
41105106 |
aaaaactatcaatattctttttagtatataaacatcaatttgatttttacataggtagacatttcaaacaagatagt |
41105030 |
T |
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