View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367_low_10 (Length: 307)
Name: NF3367_low_10
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 26579853 - 26580142
Alignment:
| Q |
7 |
caagttctgtgcagtctttcctaaaccaagggaagtaataataactatacactttacattataggaagacaagaatcacgttgttcattgaatttttaga |
106 |
Q |
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| T |
26579853 |
caagttctgtgcagtctttcctaaaccaagggaagtaataataaatatacactttacattataggaagacaagaatcacgttgttcattgaatttttaga |
26579952 |
T |
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| Q |
107 |
ttcataaaataaaagaacatgtgcaggtacttaatttt-gacaatttttaatcatctacttacctaactagacttattatcttgacagcagtatggattc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26579953 |
ttcataaaataaaagaacatgtgcaggtacttaatttttgacaatttttaatcatcaacttacctaactagacttattatcttgacagcagtatggattc |
26580052 |
T |
|
| Q |
206 |
aaattgactttgaaatttgaatcccatgtgggcatgacaataatttatgtggagaggtttttaattgctataatgatactccacctcctt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26580053 |
aaattgactttgaaatttgaatcccatgtgggcatgacaataattgatgtggagaggtttttaattgctataatgatactccacctcctt |
26580142 |
T |
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