View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3367_low_27 (Length: 236)
Name: NF3367_low_27
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3367_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 36329931 - 36329710
Alignment:
| Q |
1 |
tttagcagcatggatgaataaaatatggactttaatttcacacacattcaattactactgccaaaagtgatgtatatattcttgatacattatgagatga |
100 |
Q |
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| T |
36329931 |
tttagcagcatggatgaataaaatgtggactttaatttcacacacattcaattactactgccaaaagtgatgtatatattcttgatacattatgagatga |
36329832 |
T |
|
| Q |
101 |
cgtagtagacaagccataaccctcttgactagcataatatgaaaaatttaagttcaaatgtattttgaga-ttttagcctgtattcaaatttcaagtgtc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
36329831 |
cgtagtagacaagccataaccctcttgactagcataatatgaaaaatttaagttcaaatgtattttgagatttttagcctgtattcaaatttcaagtgtc |
36329732 |
T |
|
| Q |
200 |
ttttggagtttaaggataaaat |
221 |
Q |
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|||||||||||||| ||||||| |
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| T |
36329731 |
ttttggagtttaagaataaaat |
36329710 |
T |
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