View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3367_low_4 (Length: 442)

Name: NF3367_low_4
Description: NF3367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3367_low_4
NF3367_low_4
[»] chr6 (44 HSPs)
chr6 (1-310)||(21121356-21121665)
chr6 (48-310)||(16101310-16101576)
chr6 (48-313)||(12594925-12595193)
chr6 (130-310)||(27223049-27223230)
chr6 (4-276)||(24440263-24440533)
chr6 (4-276)||(1638426-1638695)
chr6 (1-312)||(16134260-16134575)
chr6 (1-310)||(23621899-23622210)
chr6 (1-272)||(19444936-19445205)
chr6 (1-292)||(1583609-1583895)
chr6 (4-276)||(1641453-1641722)
chr6 (202-273)||(17525711-17525782)
chr6 (216-310)||(29491731-29491828)
chr6 (202-276)||(1591311-1591385)
chr6 (216-310)||(16803943-16804040)
chr6 (216-310)||(16811788-16811885)
chr6 (216-310)||(16828809-16828906)
chr6 (195-273)||(18136854-18136933)
chr6 (311-360)||(404163-404213)
chr6 (196-273)||(16886354-16886432)
chr6 (49-153)||(1591160-1591265)
chr6 (1-62)||(17525922-17525983)
chr6 (319-362)||(361752-361796)
chr6 (318-360)||(331904-331947)
chr6 (321-360)||(1989064-1989103)
chr6 (318-365)||(5340075-5340122)
chr6 (313-360)||(8393765-8393812)
chr6 (321-360)||(10018400-10018439)
chr6 (318-360)||(16403976-16404019)
chr6 (311-357)||(31971532-31971579)
chr6 (318-359)||(9977058-9977100)
chr6 (318-360)||(28987877-28987919)
chr6 (318-360)||(7273050-7273094)
chr6 (312-360)||(8834930-8834979)
chr6 (318-363)||(12582247-12582292)
chr6 (312-360)||(247660-247708)
chr6 (312-359)||(291368-291416)
chr6 (312-363)||(655761-655813)
chr6 (312-355)||(2726429-2726473)
chr6 (318-350)||(12735160-12735192)
chr6 (216-310)||(15538163-15538258)
chr6 (318-361)||(28757042-28757086)
chr6 (313-360)||(32524433-32524481)
chr6 (312-360)||(33976245-33976293)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-310)||(3826-4135)
scaffold0188 (1-199)||(1296-1494)
[»] chr3 (67 HSPs)
chr3 (2-310)||(10550136-10550444)
chr3 (1-310)||(180330-180640)
chr3 (1-311)||(17549222-17549533)
chr3 (48-312)||(2043391-2043659)
chr3 (48-310)||(2035909-2036175)
chr3 (48-310)||(2039650-2039916)
chr3 (48-310)||(14040612-14040878)
chr3 (48-310)||(21070370-21070636)
chr3 (315-424)||(38958823-38958933)
chr3 (217-310)||(14037190-14037285)
chr3 (208-310)||(54045804-54045908)
chr3 (48-170)||(14037285-14037410)
chr3 (208-311)||(604661-604766)
chr3 (212-311)||(14952578-14952679)
chr3 (202-310)||(19442896-19443005)
chr3 (195-272)||(15231493-15231570)
chr3 (195-272)||(15237361-15237438)
chr3 (228-311)||(19441335-19441420)
chr3 (312-363)||(48849775-48849826)
chr3 (202-310)||(19445149-19445258)
chr3 (212-310)||(39229780-39229880)
chr3 (195-272)||(15221680-15221757)
chr3 (1-96)||(23396830-23396925)
chr3 (202-273)||(7631287-7631358)
chr3 (312-363)||(38130971-38131023)
chr3 (216-310)||(55293427-55293522)
chr3 (313-363)||(552171-552222)
chr3 (314-360)||(19126549-19126596)
chr3 (312-362)||(19468449-19468500)
chr3 (208-310)||(15011132-15011236)
chr3 (312-360)||(48315036-48315085)
chr3 (312-360)||(53633629-53633678)
chr3 (319-363)||(55066619-55066664)
chr3 (216-310)||(16798676-16798771)
chr3 (312-359)||(88617-88664)
chr3 (318-360)||(1757687-1757730)
chr3 (318-360)||(7974530-7974573)
chr3 (312-363)||(8747248-8747299)
chr3 (318-360)||(10922326-10922369)
chr3 (318-360)||(17588362-17588405)
chr3 (216-276)||(18957852-18957913)
chr3 (318-360)||(35126287-35126330)
chr3 (309-355)||(38094626-38094673)
chr3 (318-360)||(51882218-51882261)
chr3 (48-168)||(54045946-54046070)
chr3 (318-360)||(5702196-5702238)
chr3 (311-360)||(10843792-10843842)
chr3 (312-361)||(16663248-16663298)
chr3 (318-359)||(21914089-21914131)
chr3 (311-360)||(46298066-46298116)
chr3 (318-363)||(53996296-53996342)
chr3 (312-360)||(7464503-7464552)
chr3 (312-360)||(7557546-7557595)
chr3 (312-360)||(7738669-7738718)
chr3 (1-77)||(16488365-16488439)
chr3 (316-359)||(23090256-23090301)
chr3 (321-354)||(26610514-26610547)
chr3 (318-357)||(376649-376689)
chr3 (48-150)||(604498-604603)
chr3 (312-360)||(916440-916488)
chr3 (318-357)||(3176991-3177031)
chr3 (313-360)||(18870738-18870786)
chr3 (318-365)||(21967551-21967599)
chr3 (318-365)||(21989987-21990035)
chr3 (311-358)||(24428484-24428532)
chr3 (313-360)||(33771690-33771738)
chr3 (312-363)||(45431945-45431997)
[»] chr2 (50 HSPs)
chr2 (1-311)||(24276202-24276513)
chr2 (48-311)||(23362652-23362916)
chr2 (1-310)||(6478994-6479304)
chr2 (48-313)||(41685630-41685899)
chr2 (5-276)||(23079262-23079529)
chr2 (1-272)||(20353864-20354132)
chr2 (1-276)||(23084720-23084996)
chr2 (1-272)||(10040778-10041048)
chr2 (1-311)||(22108674-22108986)
chr2 (1-170)||(21902531-21902703)
chr2 (208-310)||(31517590-31517694)
chr2 (48-310)||(31502455-31502720)
chr2 (48-310)||(31505021-31505286)
chr2 (212-310)||(44619906-44620006)
chr2 (48-310)||(12628656-12628922)
chr2 (1-68)||(24159773-24159839)
chr2 (318-363)||(27152350-27152396)
chr2 (318-363)||(11839693-11839739)
chr2 (222-310)||(20592195-20592284)
chr2 (318-362)||(4897541-4897586)
chr2 (318-362)||(4944935-4944980)
chr2 (311-363)||(13100275-13100328)
chr2 (312-360)||(31815899-31815948)
chr2 (312-360)||(34977204-34977253)
chr2 (318-361)||(18324912-18324956)
chr2 (318-360)||(2256971-2257014)
chr2 (312-358)||(7772472-7772519)
chr2 (313-363)||(23250333-23250384)
chr2 (321-363)||(28644522-28644565)
chr2 (318-359)||(5168597-5168639)
chr2 (311-360)||(7206125-7206175)
chr2 (318-363)||(20120739-20120785)
chr2 (28-62)||(25650722-25650756)
chr2 (318-359)||(26133538-26133580)
chr2 (318-363)||(36264497-36264543)
chr2 (318-363)||(36547253-36547299)
chr2 (315-360)||(43067666-43067712)
chr2 (312-360)||(20565087-20565136)
chr2 (1-46)||(23374421-23374465)
chr2 (312-360)||(24593376-24593425)
chr2 (312-360)||(31543012-31543061)
chr2 (312-360)||(3708694-3708742)
chr2 (312-363)||(8091170-8091222)
chr2 (318-361)||(10058870-10058914)
chr2 (312-360)||(11868674-11868722)
chr2 (311-362)||(13000683-13000735)
chr2 (318-361)||(16204835-16204879)
chr2 (318-357)||(25395460-25395500)
chr2 (321-360)||(27412857-27412897)
chr2 (312-360)||(35360067-35360115)
[»] chr4 (62 HSPs)
chr4 (20-310)||(14034661-14034952)
chr4 (1-310)||(33685392-33685703)
chr4 (1-310)||(12731901-12732211)
chr4 (1-308)||(20900393-20900701)
chr4 (106-311)||(9389096-9389303)
chr4 (48-310)||(286058-286324)
chr4 (48-310)||(47127673-47127940)
chr4 (143-276)||(3336341-3336474)
chr4 (120-310)||(10976928-10977119)
chr4 (48-310)||(28381795-28382060)
chr4 (1-272)||(13876965-13877235)
chr4 (1-276)||(16372321-16372596)
chr4 (1-182)||(13880754-13880934)
chr4 (48-310)||(15243065-15243331)
chr4 (40-272)||(28916312-28916545)
chr4 (208-310)||(27026820-27026924)
chr4 (212-310)||(16358437-16358537)
chr4 (212-310)||(10312692-10312792)
chr4 (311-361)||(19908691-19908742)
chr4 (212-310)||(13742088-13742188)
chr4 (208-276)||(6510702-6510770)
chr4 (312-360)||(29908056-29908105)
chr4 (228-273)||(32489121-32489166)
chr4 (318-362)||(38416055-38416100)
chr4 (312-360)||(54151637-54151686)
chr4 (312-360)||(42861746-42861794)
chr4 (318-361)||(50442765-50442809)
chr4 (312-363)||(56204944-56204996)
chr4 (318-360)||(20096288-20096331)
chr4 (321-363)||(30135137-30135180)
chr4 (318-360)||(43034360-43034403)
chr4 (318-360)||(55430596-55430639)
chr4 (318-363)||(6087744-6087790)
chr4 (318-363)||(16743302-16743348)
chr4 (318-363)||(19854562-19854608)
chr4 (312-361)||(20383487-20383537)
chr4 (311-360)||(40070979-40071029)
chr4 (312-360)||(7230280-7230329)
chr4 (312-360)||(13276129-13276178)
chr4 (312-360)||(20799406-20799455)
chr4 (318-358)||(21318271-21318312)
chr4 (312-360)||(24665003-24665052)
chr4 (311-360)||(25978318-25978367)
chr4 (312-360)||(42845025-42845074)
chr4 (312-360)||(44815941-44815990)
chr4 (1-91)||(3336523-3336613)
chr4 (312-360)||(10261781-10261829)
chr4 (321-361)||(10407062-10407102)
chr4 (312-359)||(11949775-11949823)
chr4 (321-360)||(13984663-13984703)
chr4 (202-273)||(15311922-15311994)
chr4 (312-359)||(17423189-17423237)
chr4 (312-360)||(21562626-21562674)
chr4 (312-360)||(24079852-24079900)
chr4 (312-360)||(26926722-26926770)
chr4 (311-362)||(30847993-30848045)
chr4 (318-357)||(41520957-41520997)
chr4 (318-361)||(43027291-43027335)
chr4 (312-360)||(43330147-43330195)
chr4 (312-359)||(46676510-46676558)
chr4 (313-360)||(50362152-50362200)
chr4 (312-360)||(51450213-51450261)
[»] chr1 (60 HSPs)
chr1 (1-310)||(28205238-28205548)
chr1 (1-310)||(20900168-20900478)
chr1 (1-310)||(13529502-13529812)
chr1 (48-310)||(36180569-36180835)
chr1 (48-311)||(20630235-20630502)
chr1 (1-276)||(18822826-18823098)
chr1 (1-310)||(18274033-18274344)
chr1 (1-311)||(18251342-18251654)
chr1 (1-310)||(18269355-18269666)
chr1 (1-272)||(21118602-21118875)
chr1 (1-276)||(21182084-21182355)
chr1 (212-310)||(14433396-14433496)
chr1 (195-272)||(8682349-8682426)
chr1 (48-310)||(24086467-24086733)
chr1 (1-70)||(21529332-21529402)
chr1 (212-310)||(22071430-22071530)
chr1 (216-311)||(22901392-22901490)
chr1 (318-360)||(47719125-47719168)
chr1 (196-310)||(16398063-16398180)
chr1 (196-310)||(16399887-16400004)
chr1 (312-360)||(12212295-12212344)
chr1 (318-362)||(28039878-28039923)
chr1 (315-363)||(29935980-29936029)
chr1 (311-363)||(33153891-33153944)
chr1 (318-359)||(33437656-33437697)
chr1 (231-310)||(45495702-45495784)
chr1 (313-360)||(2889939-2889987)
chr1 (318-361)||(24631838-24631882)
chr1 (311-362)||(49868009-49868061)
chr1 (313-360)||(49875612-49875660)
chr1 (318-360)||(5270758-5270801)
chr1 (321-363)||(12852223-12852266)
chr1 (315-357)||(18056731-18056774)
chr1 (318-360)||(19396209-19396252)
chr1 (314-360)||(26086929-26086976)
chr1 (318-360)||(29800533-29800576)
chr1 (319-361)||(33229701-33229744)
chr1 (315-360)||(3431330-3431376)
chr1 (311-360)||(6000154-6000204)
chr1 (319-360)||(10356202-10356244)
chr1 (318-360)||(10385289-10385331)
chr1 (318-363)||(28832189-28832235)
chr1 (322-363)||(35690209-35690251)
chr1 (318-363)||(51067912-51067958)
chr1 (321-365)||(3573345-3573390)
chr1 (318-362)||(8253737-8253782)
chr1 (312-360)||(9639829-9639878)
chr1 (312-360)||(31759905-31759954)
chr1 (312-360)||(38448878-38448927)
chr1 (312-360)||(41763167-41763216)
chr1 (319-355)||(41972749-41972786)
chr1 (318-357)||(1408438-1408478)
chr1 (321-360)||(6094422-6094462)
chr1 (321-360)||(15729430-15729470)
chr1 (313-360)||(17283951-17283999)
chr1 (321-360)||(30678834-30678874)
chr1 (318-357)||(32497499-32497539)
chr1 (318-362)||(34647736-34647780)
chr1 (318-361)||(43843890-43843934)
chr1 (313-360)||(45140019-45140067)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-310)||(1234-1543)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-310)||(49940-50254)
[»] chr8 (42 HSPs)
chr8 (1-310)||(365612-365920)
chr8 (1-275)||(17273238-17273509)
chr8 (51-310)||(21416108-21416371)
chr8 (1-292)||(22435158-22435444)
chr8 (27-276)||(20392417-20392667)
chr8 (1-276)||(18025180-18025454)
chr8 (1-292)||(20384498-20384786)
chr8 (48-310)||(22060298-22060548)
chr8 (195-311)||(32948886-32949004)
chr8 (1-311)||(15005360-15005672)
chr8 (40-163)||(23408797-23408915)
chr8 (212-310)||(22146467-22146567)
chr8 (195-273)||(22522571-22522650)
chr8 (1-62)||(22616177-22616238)
chr8 (208-272)||(21414263-21414327)
chr8 (216-310)||(24708851-24708948)
chr8 (216-276)||(17613789-17613850)
chr8 (318-360)||(37999438-37999481)
chr8 (319-363)||(18942915-18942960)
chr8 (216-310)||(44523929-44524024)
chr8 (318-360)||(13357459-13357502)
chr8 (318-360)||(15079170-15079213)
chr8 (318-360)||(23816790-23816833)
chr8 (318-360)||(33451367-33451410)
chr8 (318-363)||(56822-56868)
chr8 (314-359)||(989591-989637)
chr8 (318-359)||(8984512-8984554)
chr8 (311-360)||(11708986-11709036)
chr8 (313-362)||(30427729-30427779)
chr8 (311-360)||(37938495-37938545)
chr8 (312-360)||(6447189-6447238)
chr8 (318-358)||(8442505-8442546)
chr8 (312-360)||(19778065-19778114)
chr8 (312-360)||(29716712-29716761)
chr8 (313-360)||(7553679-7553727)
chr8 (318-361)||(13105093-13105137)
chr8 (312-360)||(20665375-20665423)
chr8 (312-360)||(30550738-30550786)
chr8 (318-361)||(30623292-30623336)
chr8 (312-363)||(32421566-32421618)
chr8 (315-354)||(42575977-42576017)
chr8 (312-360)||(44215487-44215535)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-310)||(22771-23081)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-312)||(8651-8963)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-200)||(35537-35735)
[»] scaffold0020 (1 HSPs)
scaffold0020 (75-310)||(43-280)
[»] chr7 (52 HSPs)
chr7 (162-311)||(8249520-8249669)
chr7 (48-312)||(48784162-48784430)
chr7 (130-310)||(16005221-16005402)
chr7 (1-310)||(13773110-13773421)
chr7 (1-276)||(7508113-7508385)
chr7 (1-263)||(10628961-10629225)
chr7 (1-263)||(10638656-10638920)
chr7 (1-292)||(15732266-15732552)
chr7 (1-276)||(14417019-14417292)
chr7 (48-276)||(14107106-14107335)
chr7 (195-276)||(12202734-12202815)
chr7 (1-62)||(39996325-39996386)
chr7 (202-276)||(15724780-15724854)
chr7 (321-360)||(36755015-36755054)
chr7 (321-360)||(36760812-36760851)
chr7 (202-273)||(39996525-39996596)
chr7 (318-360)||(4047786-4047828)
chr7 (318-363)||(22991409-22991455)
chr7 (28-141)||(711502-711615)
chr7 (49-153)||(15724900-15725005)
chr7 (318-358)||(44941431-44941472)
chr7 (317-360)||(5833042-5833086)
chr7 (311-362)||(8615021-8615073)
chr7 (313-360)||(21322175-21322223)
chr7 (313-357)||(29926421-29926465)
chr7 (318-361)||(37230046-37230090)
chr7 (313-360)||(10242481-10242528)
chr7 (322-360)||(21164780-21164819)
chr7 (318-360)||(26816682-26816725)
chr7 (312-360)||(10244727-10244776)
chr7 (312-360)||(19599145-19599194)
chr7 (312-360)||(19626537-19626586)
chr7 (321-361)||(23221391-23221432)
chr7 (318-362)||(25923389-25923434)
chr7 (319-363)||(30793065-30793110)
chr7 (318-354)||(39458562-39458599)
chr7 (312-360)||(46987086-46987135)
chr7 (216-310)||(16929747-16929844)
chr7 (312-360)||(20085771-20085819)
chr7 (312-360)||(20763155-20763203)
chr7 (318-361)||(21105602-21105646)
chr7 (313-360)||(21554947-21554995)
chr7 (318-361)||(24991780-24991824)
chr7 (312-363)||(25888897-25888949)
chr7 (321-360)||(28012635-28012675)
chr7 (312-360)||(29488721-29488769)
chr7 (312-360)||(33232409-33232457)
chr7 (321-360)||(34000262-34000302)
chr7 (312-360)||(34284551-34284599)
chr7 (312-363)||(37516814-37516866)
chr7 (320-359)||(39043756-39043796)
chr7 (312-359)||(47342446-47342494)
[»] chr5 (45 HSPs)
chr5 (1-276)||(21998882-21999154)
chr5 (143-276)||(24278314-24278447)
chr5 (143-276)||(24383766-24383899)
chr5 (1-276)||(21981503-21981775)
chr5 (1-276)||(8953477-8953749)
chr5 (4-292)||(21559958-21560242)
chr5 (229-310)||(21906385-21906468)
chr5 (1-197)||(21906194-21906387)
chr5 (195-272)||(26705697-26705774)
chr5 (195-272)||(26975430-26975507)
chr5 (313-363)||(40056603-40056654)
chr5 (216-311)||(16260746-16260844)
chr5 (216-311)||(22597981-22598079)
chr5 (216-310)||(16257152-16257249)
chr5 (216-310)||(22590871-22590968)
chr5 (216-310)||(22594426-22594523)
chr5 (222-311)||(4396756-4396848)
chr5 (318-360)||(31545871-31545914)
chr5 (311-360)||(5107256-5107306)
chr5 (318-363)||(11720891-11720937)
chr5 (311-360)||(41650950-41651000)
chr5 (312-360)||(5485186-5485235)
chr5 (321-362)||(35413313-35413354)
chr5 (318-360)||(17046334-17046377)
chr5 (318-360)||(20258545-20258588)
chr5 (318-360)||(22498942-22498985)
chr5 (48-176)||(23670924-23671055)
chr5 (318-360)||(31198709-31198752)
chr5 (318-360)||(33654748-33654791)
chr5 (315-360)||(2642778-2642824)
chr5 (318-359)||(19068457-19068499)
chr5 (318-363)||(38495139-38495185)
chr5 (318-359)||(43108570-43108612)
chr5 (312-360)||(8545001-8545050)
chr5 (312-360)||(18589879-18589928)
chr5 (312-360)||(34702490-34702539)
chr5 (312-360)||(37932330-37932379)
chr5 (312-360)||(39914901-39914950)
chr5 (312-360)||(39980508-39980557)
chr5 (318-365)||(1745974-1746022)
chr5 (313-360)||(3671218-3671266)
chr5 (312-363)||(10704343-10704395)
chr5 (308-360)||(23422876-23422928)
chr5 (329-361)||(29144141-29144173)
chr5 (312-360)||(37462112-37462160)
[»] scaffold0003 (1 HSPs)
scaffold0003 (48-307)||(32531-32794)
[»] scaffold0124 (1 HSPs)
scaffold0124 (48-310)||(42927-43193)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-312)||(645-955)
[»] scaffold0586 (1 HSPs)
scaffold0586 (51-310)||(830-1093)
[»] scaffold0116 (1 HSPs)
scaffold0116 (88-307)||(25409-25629)
[»] scaffold0970 (1 HSPs)
scaffold0970 (1-310)||(3108-3421)
[»] scaffold0609 (1 HSPs)
scaffold0609 (1-310)||(8816-9128)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-308)||(5099-5406)
[»] scaffold0371 (1 HSPs)
scaffold0371 (26-276)||(4694-4945)
[»] scaffold0149 (2 HSPs)
scaffold0149 (26-276)||(28530-28781)
scaffold0149 (216-310)||(14398-14493)
[»] scaffold0635 (1 HSPs)
scaffold0635 (1-272)||(6022-6292)
[»] scaffold1908 (1 HSPs)
scaffold1908 (186-276)||(1161-1251)
[»] scaffold0004 (1 HSPs)
scaffold0004 (4-276)||(58523-58794)
[»] scaffold0447 (1 HSPs)
scaffold0447 (1-263)||(13201-13461)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-263)||(11196-11456)
[»] scaffold0395 (2 HSPs)
scaffold0395 (43-308)||(9544-9810)
scaffold0395 (216-273)||(10653-10711)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-310)||(157841-158148)
[»] scaffold0247 (2 HSPs)
scaffold0247 (4-64)||(3750-3810)
scaffold0247 (198-273)||(3943-4018)
[»] scaffold0079 (1 HSPs)
scaffold0079 (212-310)||(22201-22301)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-153)||(198368-198522)
scaffold0016 (202-273)||(198548-198618)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-61)||(40923-40983)
[»] scaffold0069 (4 HSPs)
scaffold0069 (195-273)||(33870-33949)
scaffold0069 (195-273)||(40867-40946)
scaffold0069 (195-273)||(28590-28669)
scaffold0069 (195-273)||(32705-32784)
[»] scaffold0697 (1 HSPs)
scaffold0697 (1-70)||(289-359)
[»] scaffold0500 (1 HSPs)
scaffold0500 (5-70)||(12353-12416)
[»] scaffold0381 (1 HSPs)
scaffold0381 (5-70)||(14612-14675)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-62)||(6123-6184)
[»] scaffold0044 (2 HSPs)
scaffold0044 (202-310)||(6808-6919)
scaffold0044 (318-365)||(42352-42400)
[»] scaffold0491 (1 HSPs)
scaffold0491 (222-310)||(9747-9837)
[»] scaffold0238 (1 HSPs)
scaffold0238 (313-360)||(25389-25437)
[»] scaffold0126 (1 HSPs)
scaffold0126 (313-360)||(34901-34949)
[»] scaffold0013 (1 HSPs)
scaffold0013 (195-273)||(902-981)
[»] scaffold0021 (1 HSPs)
scaffold0021 (318-363)||(161138-161184)
[»] scaffold0001 (1 HSPs)
scaffold0001 (318-360)||(505011-505053)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-62)||(32845-32906)
[»] scaffold0028 (1 HSPs)
scaffold0028 (216-272)||(93439-93496)
[»] scaffold0015 (1 HSPs)
scaffold0015 (313-360)||(75183-75232)
[»] scaffold0008 (1 HSPs)
scaffold0008 (308-360)||(119569-119622)
[»] scaffold0130 (1 HSPs)
scaffold0130 (30-62)||(3320-3352)
[»] scaffold0027 (1 HSPs)
scaffold0027 (321-360)||(61591-61631)
[»] scaffold0026 (1 HSPs)
scaffold0026 (312-363)||(75322-75374)


Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 21121356 - 21121665
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21121356 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 21121455  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21121456 tgttgaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaag 21121555  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcg 300  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21121556 gaataacattttatcctattcgagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcg 21121655  T
Q  301 gggtgttaca 310  Q
    ||||||||||    
T  21121656 gggtgttaca 21121665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 16101576 - 16101310
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  16101576 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 16101478  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16101477 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 16101379  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  16101378 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 16101310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 48 - 313
Target Start/End: Complemental strand, 12595193 - 12594925
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| ||||   |||||||| |||||||||||||||||||||||    
T  12595193 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggcctagtgccaaggatttatttgaaggatgtttaatg 12595095  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||||  |||||||| ||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  12595094 ttgaaaatat-ttccgctgtgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagctgtgt 12594997  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttacatcg 313  Q
    ||||||||| ||||||| |||||| ||||||||  || ||||||   ||||||||| ||||||||||||||||    
T  12594996 aacactccg-ttgttgatttaactttgattttatttattaatataactgttgggaagtcggggtgttacatcg 12594925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 130 - 310
Target Start/End: Complemental strand, 27223230 - 27223049
Alignment:
Q  130 aaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaattt 229  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||||||||||    
T  27223230 aaggatgtttaatgttgaaaattatttccgctgcgatgaattgatatgttttgatgaa-ctattatttaatgaatatcattttatcctattcaagaattt 27223132  T
Q  230 ttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  27223131 ttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 27223049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 24440533 - 24440263
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatattta 100  Q
    ||||||||| ||||| |||||  |||||||||||||  ||||| ||||||||||||||||||||||| |   |||||||||| ||| |||| |||| |||    
T  24440533 atacgtaacaggatg-ggaaatattgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatccttaaagataatta 24440437  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatg-ttttattgaaaccattatttaa 199  Q
    |||| |||| ||||||| ||||||| ||||| | ||||||||||||||||| |||||||| |||||||||||||||| |||||   ||   |||||||||    
T  24440436 tgttgaggccatgtgcc-agattta-ttgaaagttgtttaatgttgaaaat-aattccgcggcgatgaattgatatgtttttaccaaagttattatttaa 24440340  T
Q  200 tgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    | |||| |||||||| ||||| | |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  24440339 taaatagcattttattctatttatgaatttttgaaaagtagtgtgacattccgtttgttgattaactctgattttat 24440263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 1638695 - 1638426
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatattta 100  Q
    ||||||||||||||| |||||  ||||||||||||||  |||| ||||||||||||||||||||||| ||| ||   ||||  |||||||  ||||||||    
T  1638695 atacgtaacgggatg-ggaaatattgtcgttgtattt--atcattccttatgtatcattatgaacctgttggtgttagatttaatctttagagatattta 1638599  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||  ||||||| |||||||| ||||  ||||||||||||||||||  |||||||||||||||||||||||| ||||  ||   ||||| ||||    
T  1638598 tgttgaggccttgtgcca-gatttattggaagt-tgtttaatgttgaaaatat-ttccgctgcgatgaattgatatgtcttatcaaagatattatgtaat 1638502  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
     ||||  ||||||| ||||| | | |||||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  1638501 aaatagtattttattctatttatggatttttgaaaagaagtgtgacattccgtttgttgattaactctgattttat 1638426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 16134260 - 16134575
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||   |  |||| ||||| |||||||| |||||    
T  16134260 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcaatatgaacccgttcgtgtttgattaaatctttaaagatat 16134359  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| | ||    |||||||||||||||||  |||||||| ||||| |  |||||||||  ||| || |||| |    
T  16134360 ttatgtttaggccatgtgccagaatttattgggagttgttttaatgttgaaaataa--tccgctgcaatgaaatattatgttttaccgaagactattact 16134457  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttgg 293  Q
    |||| ||||  ||||||| |||||   | |||||||||||| ||||| ||| |||||||||||||| ||||||||| | |||    ||| || |||||||    
T  16134458 taataaatagtattttattctatttttggatttttgaaaagtagtgtgacattccgtttgttgatt-actctgattatttaaatgaaattttgatgttgg 16134556  T
Q  294 gaaatcggggtgttacatc 312  Q
    |||| ||||||||||||||    
T  16134557 gaaaacggggtgttacatc 16134575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 23621899 - 23622210
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||| ||||||||| | |||||| |||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||| ||| |||||    
T  23621899 ctgatacgtaacaggatgaggataatttgtcattgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctgtaaagatat 23621996  T
Q  98 tt-atgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattat 195  Q
    || ||||| |||| ||||||||  ||||||| ||||    |||||||||||||||||  |||| |||||||||||  |||||||||  ||| || |||||    
T  23621997 tttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaataa--tccgttgcgatgaattattatgttttaccgaagactattat 23622094  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgat--tttataataatatttatgttgg 293  Q
    ||||| ||||  || |||| ||||| | | |||||||||||||||||||||| |||||||||||||| ||| ||||  |||| || ||  ||||||| ||    
T  23622095 ttaataaatagtatattattctatttatggatttttgaaaagcagtgtaacattccgtttgttgatt-actttgattatttaaaagaaattttatgtagg 23622193  T
Q  294 gaaatcggggtgttaca 310  Q
    |||| ||||||||||||    
T  23622194 gaaaacggggtgttaca 23622210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 19444936 - 19445205
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| || |||||||||| ||||||||   |  |||| ||||| |||||||| |||||    
T  19444936 ctgatacgtaacgggatggggaaaccttgtcgttgtattttcatcattcgttatgtatcaatatgaacccgttggtgtttgattaaatctttaaagatat 19445035  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    |||||||||||||||||  |||||||| ||||||   |||||||||  ||| || |||| |    
T  19445036 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaataa--tccgctgcaatgaat---tatgttttaccgaagactattact 19445130  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||| ||||  ||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||||| |||||||||    
T  19445131 taataaatagtattttattctatttatggatttttgaaaagtagtgtgacattccgtttgttgatt-actctgatt 19445205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 1583895 - 1583609
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatat 97  Q
    |||||||||||||||||||| |||  || ||||||||||  ||||| ||||||||||||||||||||||| |   |||| ||||| ||||||||||||||    
T  1583895 ctgatacgtaacgggatgag-aaatattatcgttgtatt--catcattccttatgtatcattatgaacctgttagtgttagattaaatctttaaggatat 1583799  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaa-tgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
    ||||||| || | ||||||| ||||||||| ||| | ||||||| |||||||||| |||| ||||||||||| |||||||||||||   || | |||||     
T  1583798 ttatgttgagaccatgtgcc-agatttattggaa-gttgtttaattgttgaaaat-aatttcgctgcgatgatttgatatgttttaccaaagctattatg 1583702  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttg 292  Q
    |||| ||||  ||||||| ||||| | | ||||||||||||   ||| ||| |||||||||||||||||||| |||||| | ||||||||| ||||    
T  1583701 taataaatagtattttattctatttatggatttttgaaaag--ttgtgacattccgtttgttgattaactctaatttta-attaatatttacgttg 1583609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 1641722 - 1641453
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatattta 100  Q
    ||||||||| ||||| |||||  ||||||||||||||  |||| ||||||||||||||||||||||| ||| ||   ||||  |||||||  ||||||||    
T  1641722 atacgtaacaggatg-ggaaatattgtcgttgtattt--atcattccttatgtatcattatgaacctgttggtgttagatttaatctttagagatattta 1641626  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||  |||||||| ||||||| ||||  ||||||||| ||||||||  |||||||||||||||||||||||| ||||  ||   ||||| ||||    
T  1641625 tgttgaggccttgtgccaa-atttattggaagt-tgtttaatggtgaaaatat-ttccgctgcgatgaattgatatgtcttatcaaagatattatgtaat 1641529  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
     ||||  ||||||| ||||| | | |||||||||||| ||||| ||| || |||||||||||||||||||||||||    
T  1641528 aaatagtattttattctatttatggatttttgaaaagaagtgtgacattctgtttgttgattaactctgattttat 1641453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 17525782 - 17525711
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt 273  Q
    |||| |||||||| ||||| | |||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  17525782 aatagcattttattctatttatgaatttttgaaaagcagtgtgacattccgttagttgattaactctgattt 17525711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 29491828 - 29491731
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  29491828 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttaca 29491731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 276
Target Start/End: Original strand, 1591311 - 1591385
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    |||| ||||| || ||||| | |||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  1591311 aatagcatttcattctatttatgaatttttgaaaagtagtgtgacattccgttagttgattaactctgattttat 1591385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 16804040 - 16803943
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||||||||| |||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  16804040 ctatttaagaaattttgaaaagcagtataacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttaca 16803943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 16811885 - 16811788
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||||||||| |||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  16811885 ctatttaagaaattttgaaaagcagtataacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttaca 16811788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 16828906 - 16828809
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||||||||| |||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  16828906 ctatttaagaaattttgaaaagcagtataacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttaca 16828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 18136933 - 18136854
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||| ||| | |||||| ||| | |||||||||||    
T  18136933 tttaatgaatagcattttattctatttaagaaattttgaaaagcagtgtgacattcccgtttattgttgaactctgattt 18136854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 404213 - 404163
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  404213 tcggacattgcatatattatgcattgtccttaccaactaagttaagctcac 404163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 16886354 - 16886432
Alignment:
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||| ||| | |||||||||||    
T  16886354 ttaataaatagcattttattctatttaagaatttttgaaaagcagtgtgacattcccgtttattgttgaactctgattt 16886432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 1591160 - 1591265
Alignment:
Q  49 ccttatgtatcattatgaaccttttgttg---gattagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgtt 145  Q
    ||||||||||| |||||||||| ||| ||   ||||  |||||||| |||||||||||| |||| ||||||| ||||||| ||| ||| |||||||||||    
T  1591160 ccttatgtatctttatgaacctgttgatgttagatttaatctttaaagatatttatgttgaggccatgtgcc-agattta-ttggaggttgtttaatgtt 1591257  T
Q  146 gaaaataa 153  Q
     |||||||    
T  1591258 aaaaataa 1591265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17525983 - 17525922
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    ||||||| |||||||||| ||| |  ||||||||| |||||||||| |||||||||||||||    
T  17525983 ctgatacataacgggatggggataaattgtcgttgaattttcatcattccttatgtatcatt 17525922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 361796 - 361752
Alignment:
Q  319 tgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  361796 tgcatatattatgcattgtccataccaactgagttaagctcacaa 361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 331904 - 331947
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  331904 ttgcatatattatgcattgtctctaccaactgagttaagctcac 331947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 1989064 - 1989103
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  1989064 catatattatgcattgtcataccaactgagttaagctcac 1989103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 5340122 - 5340075
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcacaagta 365  Q
    ||||||||||||| |||||||||||||| |||||||| ||||| ||||    
T  5340122 ttgcatatattatacattatcctaccaattgagttaaactcacgagta 5340075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 8393765 - 8393812
Alignment:
Q  313 ggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||| |||||||| ||||||||||||| |||||| |||||||||||||    
T  8393765 ggaccttgcatattttatgcattatccaaccaaccgagttaagctcac 8393812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 10018439 - 10018400
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  10018439 catatattatgcattatcctaccaactgagctaaactcac 10018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 16403976 - 16404019
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  16403976 ttgcatatattatgcattatctctgccaactgagttaagctcac 16404019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 31971579 - 31971532
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagct 357  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  31971579 tcggaccttgcatatattatgcattgtccttaccaactgagttaagct 31971532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 9977100 - 9977058
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  9977100 ttgcatatattatgcattatccataccaattgagttaagctca 9977058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 28987919 - 28987877
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||    
T  28987919 ttgcatttattatgtattgtcctaccaactgagttaagctcac 28987877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 7273094 - 7273050
Alignment:
Q  318 ttgcatatattatgcattatcc--taccaactgagttaagctcac 360  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||    
T  7273094 ttgcatatattattcattatcccttaccaactgagttaagctcac 7273050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 8834979 - 8834930
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| ||||||| |||||||||||||| || ||||||||||||||||||    
T  8834979 cggactttgcatacattatgcattatccttatcaactgagttaagctcac 8834930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 12582247 - 12582292
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcacaag 363  Q
    |||||||| ||||||||| ||||||||||| || ||||||||||||    
T  12582247 ttgcatattttatgcattgtcctaccaactaagctaagctcacaag 12582292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 247708 - 247660
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  247708 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 247660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 291416 - 291368
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    ||||| ||||||||||||||||| |||| |||||||||| |||||||||    
T  291416 cggaccttgcatatattatgcatgatccataccaactgatttaagctca 291368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 655761 - 655813
Alignment:
Q  312 cggacattgcatatattatgcattatc-ctaccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  655761 cggaccttgcatatattatgcattgtcgataccaactgagctaagctcacaag 655813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 2726429 - 2726473
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaag 355  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||    
T  2726429 cggaccttgcatatattatgcattgtccataccaactgagttaag 2726473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 350
Target Start/End: Original strand, 12735160 - 12735192
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgag 350  Q
    |||||||||||||||||| ||||||||||||||    
T  12735160 ttgcatatattatgcattgtcctaccaactgag 12735192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 15538258 - 15538163
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt-aactctgattttataat-aatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||  |||||||||||| |||| | ||||| |||||||||||||| || |||||   ||||||||| |||||||||||||    
T  15538258 ctatttaagaaattttgaaagacagtgtaacacttcgtt-gatgatttaactctgattttattattaatataattgttgggaagtcggggtgttaca 15538163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 28757042 - 28757086
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcaca 361  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||    
T  28757042 ttgcatatattatacattgtccttaccaactgagttaagctcaca 28757086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 32524433 - 32524481
Alignment:
Q  313 ggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| | |||||||| ||||||||||||||    
T  32524433 ggactttgcatatattatgcattgtccctaccaattgagttaagctcac 32524481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 33976293 - 33976245
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  33976293 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 33976245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 282; Significance: 1e-158; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 3826 - 4135
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3826 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcattataaaccttttgttggattagatctttaaggatattta 3925  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3926 tgttgaggttatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgtgatgaattgatatgttttattgaaaccattatttaat 4025  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4026 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcg 4125  T
Q  301 gggtgttaca 310  Q
    ||||||||||    
T  4126 gggtgttaca 4135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1296 - 1494
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1296 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcattataaaccttttgttggattagatctttaaggatattta 1395  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1396 tgttgaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaa 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 281; Significance: 1e-157; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 2 - 310
Target Start/End: Complemental strand, 10550444 - 10550136
Alignment:
Q  2 tgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatatttat 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10550444 tgatacgtaaccggatggggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttggattagatctttaaggatatttat 10550345  T
Q  102 gttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatg 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10550344 gttgaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaatttcgctgcgatgaattgatatgttttattgaaaccattatttaatg 10550245  T
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcgg 301  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10550244 aataacattttatcctattcaagaatttttgaaaagcagcgtaacactccgtttgttgattaactctgattttataataatatttatgttgggaaatcgg 10550145  T
Q  302 ggtgttaca 310  Q
    |||||||||    
T  10550144 ggtgttaca 10550136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 180330 - 180640
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  180330 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttggattaaatctttaaagatattta 180429  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  180430 tgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaat 180528  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  180529 gaatagcattttatcttattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttatttaataatatttatgttgggaaat 180628  T
Q  299 cggggtgttaca 310  Q
    ||||||||||||    
T  180629 cggggtgttaca 180640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 17549222 - 17549533
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17549222 ctgatacgtaacggaatgaggaaactttgtcgttatattttcatcattccttatgtatcattacgaaccttttgttggattagatctttaaggatattta 17549321  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17549322 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaat 17549421  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta-taataatatttatgttgggaaatc 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| || ||||||||||    
T  17549422 gaatagcattttatcctattcaagaatttttgaaaagcagtgtgacactccatttgttgattaactctgattttattaataaaattaatattgggaaatc 17549521  T
Q  300 ggggtgttacat 311  Q
    | ||||||||||    
T  17549522 gaggtgttacat 17549533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 48 - 312
Target Start/End: Original strand, 2043391 - 2043659
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  2043391 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 2043489  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2043490 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 2043588  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttacatc 312  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||||    
T  2043589 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttacatc 2043659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 2035909 - 2036175
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  2035909 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 2036007  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2036008 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 2036106  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  2036107 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 2036175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 2039650 - 2039916
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  2039650 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 2039748  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2039749 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 2039847  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  2039848 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 2039916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 14040878 - 14040612
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  14040878 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 14040780  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14040779 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 14040681  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  14040680 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 14040612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 21070370 - 21070636
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  21070370 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 21070468  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21070469 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 21070567  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||| ||| |||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  21070568 aacactcc-ttttttgatttaactctgattttatttattaatataactgttgggaagtcggggtgttaca 21070636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 38958823 - 38958933
Alignment:
Q  315 acattgcatatattatgcattatcctaccaactgagttaagctcacaagtatc--taagcccgcaaaaagaatattattttatttgttaaattcttcaat 412  Q
    ||||||||||| ||||||||||||||| ||| ||| |||||||||||||||    |||||| | ||||||||||||||||||||||||||||||||||||    
T  38958823 acattgcatattttatgcattatcctatcaattgaattaagctcacaagtacagataagccag-aaaaagaatattattttatttgttaaattcttcaat 38958921  T
Q  413 tacaatctaccg 424  Q
    ||||||||||||    
T  38958922 tacaatctaccg 38958933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 14037285 - 14037190
Alignment:
Q  217 tattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  14037285 tattcaagaatttttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 14037190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 54045908 - 54045804
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggt 304  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||    
T  54045908 attttattctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggt 54045810  T
Q  305 gttaca 310  Q
    ||||||    
T  54045809 gttaca 54045804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 170
Target Start/End: Complemental strand, 14037410 - 14037285
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  14037410 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 14037312  T
Q  144 ttgaaaataaattccgctgcgatgaat 170  Q
    |||||||| | | ||||||||||||||    
T  14037311 ttgaaaattattcccgctgcgatgaat 14037285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 208 - 311
Target Start/End: Original strand, 604661 - 604766
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggt 304  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||    
T  604661 attttattctatttaagaaattttgaaaggcagtgtaacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggt 604759  T
Q  305 gttacat 311  Q
    |||||||    
T  604760 gttacat 604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 14952578 - 14952679
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  14952578 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatctattaatataactgttgggaagtcggggtgtta 14952676  T
Q  309 cat 311  Q
    |||    
T  14952677 cat 14952679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 19443005 - 19442896
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttt-ataataa-tatttatgttgggaaatc 299  Q
    |||| |||||||| ||||| | ||||||| |||||||||||||||| ||||||||||| || ||||||||||| || | || | |||||||||||||| |    
T  19443005 aatagcattttattctattaaggaatttt-gaaaagcagtgtaacattccgtttgttgttttactctgatttttatgagaaatttttatgttgggaaaac 19442907  T
Q  300 ggggtgttaca 310  Q
    |||||||||||    
T  19442906 ggggtgttaca 19442896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 15231570 - 15231493
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||| ||||| | ||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  15231570 tttaataaatagcattttattctatttatgaatttttgaaaagcagcgtgacattccgttagttgattaactctgatt 15231493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 15237438 - 15237361
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||| ||||| | ||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  15237438 tttaataaatagcattttattctatttatgaatttttgaaaagcagcgtgacattccgttagttgattaactctgatt 15237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 19441420 - 19441335
Alignment:
Q  228 ttttgaaaagcagtgtaacactccgtttgttgattaactctgatttt-ataataa-tatttatgttgggaaatcggggtgttacat 311  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||| || | || | |||||||||||||| |||||||||||||    
T  19441420 ttttgaaaagcagtgtaacattccgtttgttgttttactctgatttttatgagaaatttttatgttgggaaaacggggtgttacat 19441335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 48849775 - 48849826
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  48849775 cggaccttgcatatattatgcattgtcataccaactgagttaagctcacaag 48849826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 310
Target Start/End: Complemental strand, 19445258 - 19445149
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttt-ataataa-tatttatgttgggaaatc 299  Q
    |||| |||||||| ||||| | ||||||| |||||||||||||||| ||||||||||| || ||||| ||||| || | || | |||||||||||||| |    
T  19445258 aatagcattttattctattaaggaatttt-gaaaagcagtgtaacattccgtttgttgttttactctaatttttatgagaaatttttatgttgggaaaac 19445160  T
Q  300 ggggtgttaca 310  Q
    |||||||||||    
T  19445159 ggggtgttaca 19445149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 39229880 - 39229780
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt-aactctgattttat--aataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||  | ||||||   | ||||||| |||||||||||    
T  39229880 tatcctatttaagaaattttgaaaagcggtgtaacactccgtt-gttgatttaactctgattttatttattaatataattattgggaagtcggggtgtta 39229782  T
Q  309 ca 310  Q
    ||    
T  39229781 ca 39229780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 15221757 - 15221680
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||| ||||| ||||||||| |||||||||||| ||| | |||| ||||||||||| |||||    
T  15221757 tttaataaatagcattttattctatttaagaattttcgaaaagcagtgtgacatttcgttagttgattaactttgatt 15221680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23396830 - 23396925
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggata 96  Q
    |||||||||||||||||| |||||   |||||||||||||  |||| ||||||||||||||||||||| | |   ||||||||||||||||||| ||||    
T  23396830 ctgatacgtaacgggatg-ggaaataatgtcgttgtattt--atcattccttatgtatcattatgaacttgttggtgttggattagatctttaaagata 23396925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 7631358 - 7631287
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgattt 273  Q
    ||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  7631358 aataatattttattctatttaagaaattttgaaaaacagtgtaacactccg-ttgttgatttaactctgattt 7631287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 38130971 - 38131023
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38130971 cggaccttgcatatattatgcattgtccataccaactgagttaagctcacaag 38131023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 55293427 - 55293522
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta-taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||||||||||||| || ||||||   ||||||||| |||||||||||||    
T  55293427 ctatttaagaaattttgaaaggcagtgtaacactccg-ttgatgatttaactctgattttattattaatataattgttgggaagtcggggtgttaca 55293522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 552222 - 552171
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  552222 ggaccttgcatatattatgcaatatccctaccaactgagttaagctcacaag 552171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 19126596 - 19126549
Alignment:
Q  314 gacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  19126596 gacattgcatatattatgcattatccttactaactgagttaagctcac 19126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 19468500 - 19468449
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  19468500 cggaccttgcatatattatgcattgtccataccaactgagttaagctcacaa 19468449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 15011132 - 15011236
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt-aactctgattttat--aataatatttatgttgggaaatcggggt 304  Q
    ||||||| ||||| ||||| ||| |||||| |||||| ||||||||| ||||||| ||||||||||||||  | ||||||   ||||||||| |||||||    
T  15011132 attttattctatttaagaaatttggaaaagaagtgtagcactccgtt-gttgatttaactctgattttatttattaatataactgttgggaagtcggggt 15011230  T
Q  305 gttaca 310  Q
    ||||||    
T  15011231 gttaca 15011236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 48315036 - 48315085
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  48315036 cggaccttgcatatattatgcattatccttaccaactgagctaagctcac 48315085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 53633629 - 53633678
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  53633629 cggaccttacatatattatgcattatccttaccaactgagttaagctcac 53633678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 55066619 - 55066664
Alignment:
Q  319 tgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  55066619 tgcatatattatgcattatccgtaccaactgagctaagctcacaag 55066664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 16798771 - 16798676
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta-taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||| ||| |||||||||||| ||| ||| ||||||||||||||| || ||||||   ||||||||| |||||||||||||    
T  16798771 ctatttaagaaattttgaaaggcattgtaacactccg-ttgatgatttaactctgattttattattaatataattgttgggaagtcggggtgttaca 16798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 88617 - 88664
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctca 359  Q
    ||||| |||||||||||||| ||| |||||||||||||| ||||||||    
T  88617 cggactttgcatatattatgtattgtcctaccaactgagataagctca 88664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 1757687 - 1757730
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  1757687 ttgcatatattatgcattgttcctaccaactgagttaagctcac 1757730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 7974530 - 7974573
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  7974530 ttgcatatattatgcattatccataccaactgagctaagctcac 7974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 8747248 - 8747299
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcacaag 363  Q
    ||||| || ||||||||||||||| || |||||||| |||||||||||||||    
T  8747248 cggaccttacatatattatgcattgtcataccaactaagttaagctcacaag 8747299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 10922326 - 10922369
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  10922326 ttgcatatattatgcattgtccctaccaactgagttaagctcac 10922369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 17588405 - 17588362
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  17588405 ttgcatatattatgcattgtccttaccaactgagttaagctcac 17588362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 18957913 - 18957852
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgattttat 276  Q
    ||||| ||||| |||| |||||||||||||||||||| |||||||||  ||||||||||||||    
T  18957913 ctatttaagaaattttaaaaagcagtgtaacactccg-ttgttgatttaaactctgattttat 18957852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 35126287 - 35126330
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  35126287 ttgcatatattatgcattatccctaccaactgagttaaactcac 35126330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 38094626 - 38094673
Alignment:
Q  309 catcggacattgcatatattatgcattatcc-taccaactgagttaag 355  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  38094626 catcagacattgcatatattttgcattatccttaccaactgagttaag 38094673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 51882218 - 51882261
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  51882218 ttgcatatattatgcattgtccataccaactgagttaagctcac 51882261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 168
Target Start/End: Complemental strand, 54046070 - 54045946
Alignment:
Q  48 tccttatgtatcattatgaaccttt---tgttggattagatctttaaggatatttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |   ||||| |||  |||||||| ||||||| ||||  ||||||||||||| |||||||| ||| | ||||||| |    
T  54046070 tccttatgtatcattatgaacctgttgatgttgaatttaatctttaaagatatttttgttggggctatgtgccaaggatttattggaa-gttgtttaacg 54045972  T
Q  144 ttg-aaaataaattccgctgcgatga 168  Q
    ||| ||||||  ||||||||| ||||    
T  54045971 ttgaaaaatattttccgctgcaatga 54045946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 5702196 - 5702238
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||||||||||||||| || ||||||||||| |||||||||    
T  5702196 ttgcatatattatgcattgtcttaccaactgagctaagctcac 5702238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 10843792 - 10843842
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  10843792 tcggaccttgcatatattatgtattattcataccaactgagttaagctcac 10843842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 16663248 - 16663298
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||| ||||||    
T  16663248 cggaccttgcatatattatgcattatccataccaactgagataatctcaca 16663298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 21914089 - 21914131
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctca 359  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  21914089 ttgcatatattatgcattgtccttaccaactgagttaagctca 21914131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 46298066 - 46298116
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||||||||  |||||||||| ||| |||||    
T  46298066 tcggacattgcatatattatgcattatccaaaccaactgagctaaactcac 46298116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 53996342 - 53996296
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  53996342 ttgcatatattatgcattgtccataccaactgagctaagctcacaag 53996296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 7464503 - 7464552
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| || ||||||||||||||| ||| |||||||||||||||||||||    
T  7464503 cggaccttacatatattatgcattgtccctaccaactgagttaagctcac 7464552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 7557546 - 7557595
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| ||||||| |||||||||| ||| |||||||||||||||||||||    
T  7557546 cggaccttgcatacattatgcattgtccataccaactgagttaagctcac 7557595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 7738718 - 7738669
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||| |||||||||||||||||||||    
T  7738718 cggaccttgcatattttatgcattgtccctaccaactgagttaagctcac 7738669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16488365 - 16488439
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg 77  Q
    |||||||||| | ||||| ||||| |||| |||||||||  ||||| ||||||||||||||||| || || ||||||    
T  16488365 ctgatacgtagctggatggggaaactttgccgttgtatt--catcattccttatgtatcattatcaatctgttgttg 16488439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 359
Target Start/End: Complemental strand, 23090301 - 23090256
Alignment:
Q  316 cattgcatatattatgcatt-atc-ctaccaactgagttaagctca 359  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  23090301 cattgcatatattatgcatttatctctaccaactgagttaagctca 23090256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 26610514 - 26610547
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaa 354  Q
    ||||||||||||||| ||||||||||||||||||    
T  26610514 catatattatgcattgtcctaccaactgagttaa 26610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 376689 - 376649
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagct 357  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  376689 ttgcatatattatgcattatctctaccaaccgagttaagct 376649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 604498 - 604603
Alignment:
Q  48 tccttatgtatcattatgaaccttt---tgttggattagatctttaaggatatttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |   ||||| |||  |||||||| ||||||| ||||  ||| ||||||||| |||||| ||||| | ||||||| |    
T  604498 tccttatgtatcattatgaacctgttgatgttgaatttaatctttaaagatatttttgttggggccatgtgccaaggattta-ttgaaagttgtttaacg 604596  T
Q  144 ttgaaaa 150  Q
    |||||||    
T  604597 ttgaaaa 604603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 916488 - 916440
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  916488 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 916440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 3176991 - 3177031
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagct 357  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  3176991 ttgcatatattatgcattgttcctaccaactgagttaagct 3177031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 18870738 - 18870786
Alignment:
Q  313 ggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| | ||||||||||||| |||||||||    
T  18870738 ggaccttgcatatattatgcattgtccctaccaactgagctaagctcac 18870786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 21967599 - 21967551
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaagta 365  Q
    ||||||||||||| |||| |||| |||||||||||||||||||| ||||    
T  21967599 ttgcatatattatacattgtccttaccaactgagttaagctcacgagta 21967551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 21990035 - 21989987
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaagta 365  Q
    ||||||||||||| |||| |||| |||||||||||||||||||| ||||    
T  21990035 ttgcatatattatacattgtccttaccaactgagttaagctcacgagta 21989987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 24428484 - 24428532
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctc 358  Q
    |||||| |||||||||||||||||| ||| ||||||||||| |||||||    
T  24428484 tcggactttgcatatattatgcattgtccataccaactgagctaagctc 24428532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 33771738 - 33771690
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| ||||||||||||| |||| |||| ||||||||||||||||||||    
T  33771738 ggaccttgcatatattatacattgtccttaccaactgagttaagctcac 33771690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 45431997 - 45431945
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| | ||||||||||||| |||||| |||||    
T  45431997 cggaccttgcatatattatgcattgtccctaccaactgagctaagctaacaag 45431945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 24276202 - 24276513
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  24276202 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttgaattaaatctttaaggatattta 24276301  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24276302 tgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaat 24276400  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  24276401 gaatagcattttatcctattcaagactttttgaaaagcagtgtaacactccgtttattgattaactctgattttatttaataatatttatgttgggaaat 24276500  T
Q  299 cggggtgttacat 311  Q
    |||||||||||||    
T  24276501 cggggtgttacat 24276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 48 - 311
Target Start/End: Complemental strand, 23362916 - 23362652
Alignment:
Q  48 tccttatgtatcattatgaaccttttgttggattagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttga 147  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23362916 tccttatgtatcattatgaaccttttgttggattaaatctttaaagatgtttatgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttga 23362818  T
Q  148 aaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaaca 247  Q
    |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| | |||||||||||||    
T  23362817 aaataaattatgctgcgatgaattgatatgttttattgaaactattatttaatgaatagcaatttatcctattcaagaattttttagaagcagtgtaaca 23362718  T
Q  248 ctccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  23362717 ctccgtttgttgattaactctgattttatttaataatatttatgttggaaaattggggtgttacat 23362652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 6478994 - 6479304
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6478994 ctgatacgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtat-attacgaaccttttgttggattagatctttaaggatattta 6479092  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6479093 tgttaaggctatgtgccaggatttatttgaatgatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaat 6479192  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt-ttataataatattt--atgttgggaaa 297  Q
    |||||  ||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||||| ||||||||| ||  ||||| ||||  | |||||||||    
T  6479193 gaatagtattttattctatttatggatttttgaaaagtagtgtgacattccgtttgttgatt-actctgattatttaaataaaattttgacgttgggaaa 6479291  T
Q  298 tcggggtgttaca 310  Q
     ||||||||||||    
T  6479292 acggggtgttaca 6479304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 48 - 313
Target Start/End: Original strand, 41685630 - 41685899
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    |||||||||||||||||||||||  ||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  41685630 tccttatgtatcattatgaacctgctgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 41685728  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41685729 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 41685827  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttacatcg 313  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| ||||||||||||||||    
T  41685828 aacactccg-ttgttgatttaactctgattttacttattaatatgactgttgggaagtcggggtgttacatcg 41685899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 23079529 - 23079262
Alignment:
Q  5 tacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatatttat 101  Q
    |||||||||||||| |||||  || ||||||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| || ||||| ||||||||     
T  23079529 tacgtaacgggatg-ggaaatattatcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttagattaaat-tttaaagatatttaa 23079434  T
Q  102 gttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatg 201  Q
    ||| ||||||||||||| |||||||| ||||  ||||||||||| ||||||  |||||||||||||||||||||||||||||  ||   ||||| ||||     
T  23079433 gttgaggctatgtgcca-gatttattggaagt-tgtttaatgttaaaaatat-ttccgctgcgatgaattgatatgttttatcaaagatattatgtaata 23079337  T
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||||  ||||||| ||||| | | ||||||| |||| ||||| ||| ||||||||||||||||||||||||||||    
T  23079336 aatagtattttattctatttatggatttttgtaaagaagtgtgacattccgtttgttgattaactctgattttat 23079262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 20353864 - 20354132
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||| ||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| | |||||| ||||     
T  20353864 ctgatacgtaacgggatg-ggaaatattgtcgttatatt--catcattccttatgtatcattatgaacctgttggtgttagattaaacctttaaagataa 20353960  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| || ||||| |||   ||||||||||||| ||||| |||||||||||||| |||||||||||||   || | ||||| |    
T  20353961 ttatgttgaggccatgtgcca-gacttattggaact-tgtttaatgttgagaataa-ttccgctgcgatgatttgatatgttttaccaaagctattatgt 20354057  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    | | ||||  ||||||| ||||| | | |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  20354058 agtaaatagtattttattctatttatggatttttgaaaagcagtgtgacattccgtttgttgattaactctgatt 20354132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 23084996 - 23084720
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||| | ||| ||| | |||| |||||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  23084996 ctgatacgtaacagaatggggataatttgacgttgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 23084899  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||| | |||||||||||||||||  ||||||||||||||||||  |||||||||  ||| || ||||||    
T  23084898 ttatgttgaggcgatgtgccagaatttattggaa-gttgtttaatgttgaaaat--attccgctgcgatgaattattatgttttaccgaagactattatt 23084802  T
Q  197 taatgaataacattttatcctattca-agaatttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
    |||| ||||  ||||||| ||||| |  || |||||||||||| |||| ||| || | |||||||||| |||||||||||||    
T  23084801 taataaatagtattttattctatttatggattttttgaaaagctgtgtgacattctgttttgttgatttactctgattttat 23084720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 10040778 - 10041048
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||| ||||  ||||| ||||||||||||||||||||||  ||| ||   ||||| |||||||| |||||    
T  10040778 ctgatacgtaacgggatggggataatttgtcgttctatt--catcattccttatgtatcattatgaacccgttggtgtttgattaaatctttaaagatat 10040875  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    |||||||||||||||  |||| |||||||||||||  |||||||||  ||| || | || |    
T  10040876 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaat--attctgctgcgatgaattattatgttttaccgaagactactact 10040973  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||| ||||  ||||||| ||||| | | |||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  10040974 taataaatagtattttattctatttatggatttttgaaaagcagtgtgacattccggttgttgatt-actctgatt 10041048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 22108986 - 22108674
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggata- 96  Q
    |||||||||||||||| ||||| | ||||||||  ||||  ||||| ||||||||||||||||||||| | |   |||| ||||| |||||||| ||||     
T  22108986 ctgatacgtaacgggaagaggataatttgtcgtcatatt--catcattccttatgtatcattatgaacttgttggtgtttgattaaatctttaaagatat 22108889  T
Q  97 tttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattat 195  Q
    |||||||| |||| ||||||||  ||||||  ||| | |||||||||||||||||  |||| ||| |||||||||  |||||||||  ||| || ||||     
T  22108888 tttatgtttaggccatgtgccagaatttataggaa-gttgtttaatgttgaaaat--attctgctccgatgaattattatgttttaccgaagactattaa 22108792  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttg 292  Q
     |||| ||||  ||||||  ||||| | | |||||||||||||||||||||| |||||||||||||| ||||||||| | |||    ||| |||||||||    
T  22108791 ataataaatagtattttaatctatttatggatttttgaaaagcagtgtaacattccgtttgttgatt-actctgattatttaaaagaaatttttatgttg 22108693  T
Q  293 ggaaatcggggtgttacat 311  Q
    ||||| |||| ||||||||    
T  22108692 ggaaaacgggatgttacat 22108674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 21902703 - 21902531
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||| ||||| ||| |   |||| ||||| |||||||| |||||    
T  21902703 ctgatacgtaacgggatggggaaactttgtcgttgta-tttcatcattccttatgtatcactatgagcctgttaatgttagattaaatctttaaagatat 21902605  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaa--ttccgctgcgatgaat 170  Q
    ||||||| |||| ||||| | ||| ||  ||||| | || |||||||||||| ||||  ||||||||||||||||    
T  21902604 ttatgttgaggccatgtg-ctagaatttgttgaaagttgcttaatgttgaaattaaattttccgctgcgatgaat 21902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 31517694 - 31517590
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatattta---tgttgggaaatcggggt 304  Q
    ||||||| ||||| | || ||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||   |||||||||| |||| |    
T  31517694 attttattctatttatgattttttgaaaagcagtgtgacattccgtttgttgattaactctgattttat-ttaatatttatattgttgggaaaacgggat 31517596  T
Q  305 gttaca 310  Q
    ||||||    
T  31517595 gttaca 31517590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 31502720 - 31502455
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||| ||| |||||||||||||||||||||||    
T  31502720 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgctaaggatttatttgaaggatgtttaatg 31502622  T
Q  144 ttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||| ||  ||||||||| ||||| ||||||  |||||  ||     | |||||| ||||  | ||||| ||||| | | |||||||||||||||||    
T  31502621 ttgaaaaatactttccgctgcaatgaactgatat--tttatcaaagttgat-tttaataaatagtactttattctatttatggatttttgaaaagcagtg 31502525  T
Q  243 taacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  31502524 taacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 31502455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 31505286 - 31505021
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||| ||| |||||||||||||||||||||||    
T  31505286 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgctaaggatttatttgaaggatgtttaatg 31505188  T
Q  144 ttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||| ||  ||||||||| ||||| ||||||  |||||  ||     | |||||| ||||  | ||||| ||||| | | |||||||||||||||||    
T  31505187 ttgaaaaatactttccgctgcaatgaactgatat--tttatcaaagttgat-tttaataaatagtactttattctatttatggatttttgaaaagcagtg 31505091  T
Q  243 taacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  31505090 taacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 31505021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 44620006 - 44619906
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  44620006 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggtgtta 44619908  T
Q  309 ca 310  Q
    ||    
T  44619907 ca 44619906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 12628656 - 12628922
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   ||| |||  |||||||| ||||||| ||||  ||| |||||||||| ||||||| ||||  ||||||| |    
T  12628656 tccttatgtatcattatgaacctgttgatgttgaatttaatctttaaagatatttttgttggggccatgtgccaaggatttattggaagt-tgtttaacg 12628754  T
Q  144 ttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||| ||  |||||||||||||| | | |||| |||     ||| |||||  ||| ||||  ||||||| ||||| || || |||||||||||||||    
T  12628755 ttgaaaactattttccgctgcgatgact-gttatgatttgacagaactattatg-aataaatagtattttattctatttaaaaaattttgaaaagcagtg 12628852  T
Q  243 taacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||| || ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  12628853 taacacttcg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggtgttaca 12628922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24159839 - 24159773
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaac 68  Q
    |||||||||||||||||||||| | | ||| ||||||||| ||||| |||||||||||||||||||||    
T  24159839 ctgatacgtaacgggatgaggataatatgtggttgtattt-catcattccttatgtatcattatgaac 24159773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 27152396 - 27152350
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27152396 ttgcatatattatgcattatccctaccaactgagttaagctcacaag 27152350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 11839739 - 11839693
Alignment:
Q  318 ttgcatatatt-atgcattatcctaccaactgagttaagctcacaag 363  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11839739 ttgcatatatttatgcattatccaaccaactgagttaagctcacaag 11839693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 20592195 - 20592284
Alignment:
Q  222 aagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta-taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| |||||||| |||||||||||||||| ||| ||| ||||||||||||||| || ||||||   ||||||||| |||||||||||||    
T  20592195 aagaaattttgaaaggcagtgtaacactccg-ttgatgatttaactctgattttattattaatataattgttgggaagtcggggtgttaca 20592284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 4897586 - 4897541
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaa 362  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  4897586 ttgcatatattatgcattgtccttaccaactgagttaagctcacaa 4897541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 4944980 - 4944935
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaa 362  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  4944980 ttgcatatattatgcattgtccttaccaactgagttaagctcacaa 4944935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 13100275 - 13100328
Alignment:
Q  311 tcggacattgcatatattatgcattatccta-ccaactgagttaagctcacaag 363  Q
    |||||| ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  13100275 tcggaccttggatatattatgcattatccaaaccaactgagttaagctcacaag 13100328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 31815899 - 31815948
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  31815899 cggaccttgcatatattatgcattgtccctaccaactgagttaagctcac 31815948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 34977253 - 34977204
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  34977253 cggaccttgcatatattatgcattgtccataccaactgagttaagctcac 34977204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 18324912 - 18324956
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcaca 361  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  18324912 ttgcatatattatgcattgtccttaccaactgagttaagctcaca 18324956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 2257014 - 2256971
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  2257014 ttgcatatattatgcattgtccataccaactgagttaagctcac 2256971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 7772472 - 7772519
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctc 358  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  7772472 cggaccttgcatatattatgcattatccttaccaattgagttaagctc 7772519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 23250333 - 23250384
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||    
T  23250333 ggaccttgcatatattatgcattgttcttaccaactgagttaagctcacaag 23250384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 28644565 - 28644522
Alignment:
Q  321 catatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  28644565 catatattatgcattgtccctaccaactgagttaagctcacaag 28644522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 5168597 - 5168639
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctca 359  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  5168597 ttgcatatattatgcattatccctatcaactgagttaagctca 5168639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 7206175 - 7206125
Alignment:
Q  311 tcggacattgcatatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||| || |||||||||||| |||||||||    
T  7206175 tcggaccttgcatatattatgcattgtctctaccaactgagctaagctcac 7206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 20120739 - 20120785
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  20120739 ttgcatatattatgcattgtccttaccaactgagctaagctcacaag 20120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 25650756 - 25650722
Alignment:
Q  28 tgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    ||||||||||||||||||| |||||||||||||||    
T  25650756 tgtcgttgtattttcatcattccttatgtatcatt 25650722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 26133538 - 26133580
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctca 359  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  26133538 ttgcatatattatgcattgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 36264497 - 36264543
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||    
T  36264497 ttgcatatattatgcattatccataccaattgaattaagctcacaag 36264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 36547253 - 36547299
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  36547253 ttgcatatattatacattatccttaccaactgagctaagctcacaag 36547299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 43067712 - 43067666
Alignment:
Q  315 acattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||    
T  43067712 acattgcatatgttattcattattcctaccaactgagttaagctcac 43067666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 20565087 - 20565136
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| | ||||||||||||| |||||||||    
T  20565087 cggaccttgcatatattatgcattgtccctaccaactgagctaagctcac 20565136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23374465 - 23374421
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatca 46  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||    
T  23374465 ctgatacgtaacgggatg-gaaaactttgtcgttgtattttcatca 23374421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 24593425 - 24593376
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  24593425 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 24593376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 31543061 - 31543012
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||||||| ||||| ||||| |||||||||    
T  31543061 cggaccttgcatatattatgcattatccataccatctgagctaagctcac 31543012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 3708742 - 3708694
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  3708742 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 3708694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 8091170 - 8091222
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  8091170 cggaccttgcatatattatgcattgtccatacctactgagataagctcacaag 8091222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 10058914 - 10058870
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcaca 361  Q
    |||||||||||||||||| || ||||||| |||||||||||||||    
T  10058914 ttgcatatattatgcattgtctctaccaattgagttaagctcaca 10058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 11868674 - 11868722
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  11868674 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 11868722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 13000735 - 13000683
Alignment:
Q  311 tcggacattgcatatattatgcattatc-ctaccaactgagttaagctcacaa 362  Q
    |||||| || ||||||||||||||||||  ||||||||||| |||||||||||    
T  13000735 tcggaccttacatatattatgcattatctttaccaactgagctaagctcacaa 13000683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 16204835 - 16204879
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| || |||||||||||||||||||    
T  16204835 ttgcatatattatgcattgtccttatcaactgagttaagctcaca 16204879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 25395460 - 25395500
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagct 357  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  25395460 ttgcatatattatgcattgttcctaccaactgagttaagct 25395500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 27412857 - 27412897
Alignment:
Q  321 catatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  27412857 catatattatgcattgtctctaccaactgagttaagctcac 27412897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 35360067 - 35360115
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  35360067 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 35360115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 20 - 310
Target Start/End: Complemental strand, 14034952 - 14034661
Alignment:
Q  20 ggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatatttatgttaaggctatgtgccaa 119  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||     
T  14034952 ggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttggattaaatctttaaggatatttatgttgaggctatgtgcca- 14034854  T
Q  120 gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctat 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14034853 gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaatgaataacattttatcctat 14034754  T
Q  220 tcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  14034753 tcaagaatttttgaaaagcagtgtaacactctgtttgttgattaactctgattttatttaataatatttatgttgggaaatcggggtgttaca 14034661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 33685392 - 33685703
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| | ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33685392 ctgatacgtaacgggatgggaaaactttgccgttgtattttcatcattccttatgtatcattatgaaccttttgttggattaaatctttaaggatattta 33685491  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33685492 tgttgaggctaagtgcca-gatttatttaaaggatgtttaatgttgaaaataaattccgctgtgatgaattgatatgttttattgaaactattatttaat 33685590  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt---tataataatatttatgttgggaaa 297  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||   | ||||||||||||||||||||||    
T  33685591 gaatagcattttatcctattcaaagatttttgaaaagcagtgtaacactccgtttgttaattaactctgatttttatttaataatatttatgttgggaaa 33685690  T
Q  298 tcggggtgttaca 310  Q
    |||||||||||||    
T  33685691 tcggggtgttaca 33685703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 12731901 - 12732211
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||    
T  12731901 ctgatacgtaaagggatgaggaaactttgtcgttgaattttcatcattccttatgtatcattatcaaccttttgttggattaaatctttaaggataatta 12732000  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||  | |||||||||||||||| |||||||||||||||||| |||||||| |    
T  12732001 tgttgaggctatgtgcca-gttttatttgaaggatgtttaatgttgaaaaatatttccgctgcgatgaatagatatgttttattgaaactattatttagt 12732099  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    |||||  |||||||||||||||||| ||||||||||||||||| |||||||||| |||||  |||||||||||||  | |||||||||||||||||||||    
T  12732100 gaatagaattttatcctattcaagattttttgaaaagcagtgtgacactccgttcgttgaaaaactctgattttatttgataatatttatgttgggaaat 12732199  T
Q  299 cggggtgttaca 310  Q
    ||||||||||||    
T  12732200 cggggtgttaca 12732211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 20900393 - 20900701
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||    
T  20900393 ctgatacgtaacgggatggggaaactttgtcgttgaattttcatcattccttatgtatcattatcaaccttttgttggattaaatctttaaggataatta 20900492  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||||| |    
T  20900493 tgttgaggctatgtgcca-gttttatttgaaggatgtttaatgttgaaaaatatttccgctgcgatgaattgatatgttttattgaaactattatttagt 20900591  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    |||||  | |||||||||||||||| ||||||||||||||||| |||||||||| |||||  |||||| ||||||  |||||||||||||||||||||||    
T  20900592 gaatagaagtttatcctattcaagattttttgaaaagcagtgtgacactccgttcgttgaaaaactcttattttatttaataatatttatgttgggaaat 20900691  T
Q  299 cggggtgtta 308  Q
    ||||||||||    
T  20900692 cggggtgtta 20900701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 106 - 311
Target Start/End: Original strand, 9389096 - 9389303
Alignment:
Q  106 aggctatgtgccaag-atttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaat 204  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9389096 aggccatgtgccaaggatttatttgaaggatgtttaatgttgaaaatat-ttccgctgcgatgaattgatatgttttattgaaactattatttaatgaat 9389194  T
Q  205 aacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggg 302  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| |||    
T  9389195 agcattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttatttaacaatatttatgttgggaaattggg 9389294  T
Q  303 gtgttacat 311  Q
    |||||||||    
T  9389295 gtgttacat 9389303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 286324 - 286058
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  286324 tccttatgtatcattatgaacctgttgatgttgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 286226  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  286225 ttgaaaattattcccgctgcgatgaattgatatgttttattgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 286127  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||| |||||||| |||||||||||||||  || ||||||   ||||||||| || ||||||||||    
T  286126 aacactcc-tttgttgatttaactctgattttacttattaatataactgttgggaagtcagggtgttaca 286058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 47127673 - 47127940
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  47127673 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 47127771  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47127772 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 47127870  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||  ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  47127871 aacactcccgttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 47127940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 3336474 - 3336341
Alignment:
Q  143 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  3336474 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaatgaataacattttatcttatttaagaatttttgaaaagcagtg 3336375  T
Q  243 taacactccgtttgttgattaactctgattttat 276  Q
    | ||||||||||||||||||||||||||||||||    
T  3336374 tgacactccgtttgttgattaactctgattttat 3336341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 120 - 310
Target Start/End: Original strand, 10976928 - 10977119
Alignment:
Q  120 gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctat 219  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||    
T  10976928 gatttatttgaaggatgtttaatgttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatatcattttatcctat 10977026  T
Q  220 tcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   |||| |||| |||||||||||||    
T  10977027 tcaagaatttttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttacttattaatataactgttaggaagtcggggtgttaca 10977119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 28382060 - 28381795
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaatg 143  Q
    |||||||||||||| |||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | ||||||| ||||||||||||||||||| ||||    
T  28382060 tccttatgtatcataatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaatgatttatttgaaggatgttaaatg 28381962  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||||  | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28381961 ttgaaaatat-tcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 28381864  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  28381863 aacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggtgttaca 28381795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 13877235 - 13876965
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||| ||||||||||||| ||| | ||||||||||||||  ||||| |||||||||||| |||||||||| ||| ||   ||||| |||||||| |||||    
T  13877235 ctgacacgtaacgggatggggataatttgtcgttgtatt--catcattccttatgtatcgttatgaacctgttggtgtttgattaaatctttaaagatat 13877138  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||  ||||||||  ||||||| ||||    ||||||||||||||||  |||||||||||||||||  |||||||||  ||| || ||||||    
T  13877137 ttatgtttaggtcatgtgccagaatttattggaagttgttttaatgttgaaaata--ttccgctgcgatgaattattatgttttaccgaagactattatt 13877040  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||| ||||  ||||||| ||||| | | |||||||||||||||||||||| |  ||||||||| |||||||||||    
T  13877039 taataaatagtattttattctatttatggatttttgaaaagcagtgtaacattatgtttgttga-taactctgatt 13876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 16372321 - 16372596
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttca-tcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggata 96  Q
    |||||||||||| ||||| ||||| ||||||||||||  |||| ||| ||||||||||||||||||||||   | ||||||||||| ||| |||| ||||    
T  16372321 ctgatacgtaacaggatggggaaactttgtcgttgta--ttcattcattccttatgtatcattatgaacctgttgttgttggattaaatccttaaagata 16372418  T
Q  97 tttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgtt-gaaaataaattccgctgcgatgaattgatatgttttattgaaaccattat 195  Q
    |||||||| |||| | ||||| ||||||||| ||| | |||||||||||  ||||||  |||||||||||||||||| |||||||||   |  | ||||     
T  16372419 tttatgttgaggccaagtgcc-agatttattggaa-gttgtttaatgttaaaaaatattttccgctgcgatgaattgttatgttttaccaatgctatta- 16372515  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    | ||| ||||  |||||||  |||| | ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  16372516 tgaataaatagtattttattttatttatgaaattttgaagagcagtgtaacattccgtttgttgattaactctgattttat 16372596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 13880934 - 13880754
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||||||||  ||||| |||||||||||| |||||||||| ||| ||   ||||| |||||||| |||||    
T  13880934 ctgatacgtaacgggatggggataatttgtcgttgtatt--catcattccttatgtatcgttatgaacctgttggtgtttgattaaatctttaaagatat 13880837  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgtttta 182  Q
    ||||||| |||| ||||||||  ||||||| | ||    ||||| |||||||||||  |||||||| |||||||  |||||||||    
T  13880836 ttatgtttaggccatgtgccagaatttattaggagttgttttaaagttgaaaataa--tccgctgcaatgaattattatgtttta 13880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 15243065 - 15243331
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   ||| |||  |||||||| ||||||| |||| |||| |||||||||| ||||||| ||||  ||||||| |    
T  15243065 tccttatgtatcattatgaacctgttgatgttgaatttaatctttaaagatatttttgttgaggccatgtgccaaggatttattggaagt-tgtttaacg 15243163  T
Q  144 ttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||| ||  |||||||||||||  |||||||| ||||   ||||  |||   ||| |||   ||||||| ||||| | | ||||||||| |||||||    
T  15243164 ttgaaaaatattttccgctgcgatgt-ttgatatggtttaacaaaactgttaag-aataaattgtattttattctatttatggatttttgaatagcagtg 15243261  T
Q  243 taacactccgtttgttgattaactctgattttataat--aatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||||||||| || ||||||||| ||| ||  ||| |||||||||| ||| ||||||||||||    
T  15243262 taacattccgtttgttgttttactctgattatattatgaaatttttatgttggaaaaacggggtgttaca 15243331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 272
Target Start/End: Complemental strand, 28916545 - 28916312
Alignment:
Q  40 ttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatattt-atgttaaggctatgtgccaagatttatttgaaggat 135  Q
    ||||||| ||||||||||||||||||||| | ||| ||   || || |||||||| ||||||| ||||| |||| |||||| |  ||||||  ||||  |    
T  28916545 ttcatcattccttatgtatcattatgaacatgttggtgtttgaataaatctttaaagatattttatgtttaggccatgtgctagaatttataggaagt-t 28916447  T
Q  136 gtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatttaatgaataacattttatcctattcaagaatttttgaa 234  Q
    |||||||||||||||||  ||| |||||||||||||  |||||||||  ||| || |||| ||||| ||||  ||||||  ||||  | | |||||||||    
T  28916446 gtttaatgttgaaaata--ttctgctgcgatgaattattatgttttaccgaagactattaattaataaatagtattttactctatctatggatttttgaa 28916349  T
Q  235 aagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    ||||||||||||| || ||||||||||| |||||||||    
T  28916348 aagcagtgtaacattctgtttgttgatt-actctgatt 28916312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 27026924 - 27026820
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggt 304  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||    
T  27026924 attttattctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggt 27026826  T
Q  305 gttaca 310  Q
    ||||||    
T  27026825 gttaca 27026820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 16358537 - 16358437
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  16358537 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggtgtta 16358439  T
Q  309 ca 310  Q
    ||    
T  16358438 ca 16358437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 10312792 - 10312692
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| | |||||||||    
T  10312792 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagttggggtgtta 10312694  T
Q  309 ca 310  Q
    ||    
T  10312693 ca 10312692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 19908742 - 19908691
Alignment:
Q  311 tcggacattgcatatattatgcattatcct-accaactgagttaagctcaca 361  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  19908742 tcggaccttgcatatattatgcattgtccttaccaactgagttaagctcaca 19908691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 13742188 - 13742088
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||| | | ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  13742188 tatcctatttaagaaattttgaaaagcggtgtaacacacag-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggtgtta 13742090  T
Q  309 ca 310  Q
    ||    
T  13742089 ca 13742088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 6510770 - 6510702
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgattttat 276  Q
    ||||||| ||||| | ||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6510770 attttattctatttaggaaatttcgaaaagcagtgtaacactccg-ttgttgatttaactctgattttat 6510702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 29908105 - 29908056
Alignment:
Q  312 cggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  29908105 cggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 29908056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 32489166 - 32489121
Alignment:
Q  228 ttttgaaaagcagtgtaacactccgtttgttgattaactctgattt 273  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  32489166 ttttgaaaagcagtgtgacattccgttagttgattaactctgattt 32489121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 38416100 - 38416055
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  38416100 ttgcatatattatgcattatccttaccaactgagctaagctcacaa 38416055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 54151637 - 54151686
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  54151637 cggactttgcatatattatacattatccttaccaactgagttaagctcac 54151686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 42861794 - 42861746
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| || ||||| ||||||||| ||||||||||||||||||||||||    
T  42861794 cggaccttacatatgttatgcattgtcctaccaactgagttaagctcac 42861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 50442765 - 50442809
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcaca 361  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  50442765 ttgcatatattatgcattatccctaccaactgagctaagctcaca 50442809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 56204996 - 56204944
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  56204996 cggaccttgcatatattatgcattgtccttaccaactgagttaaactcacaag 56204944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 20096288 - 20096331
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  20096288 ttgcatatattatgcattatccctaccaactgagttaaactcac 20096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 30135180 - 30135137
Alignment:
Q  321 catatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    |||||||||||||||||||| | |||||||||||||||||||||    
T  30135180 catatattatgcattatccttatcaactgagttaagctcacaag 30135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 43034360 - 43034403
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  43034360 ttgcatatattatgcattgtccataccaactgagttaagctcac 43034403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 55430639 - 55430596
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  55430639 ttgcatatattatgcattattcctaccaactgagttaaactcac 55430596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 6087790 - 6087744
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcacaag 363  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  6087790 ttgcatatattatgcattatctataccaactgagctaagctcacaag 6087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 16743302 - 16743348
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||    
T  16743302 ttgcatatattatgcattatccatatcaactgagctaagctcacaag 16743348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 19854608 - 19854562
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  19854608 ttgcatatattatgcattgtccataccaactgagctaagctcacaag 19854562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 20383537 - 20383487
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    ||||| |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  20383537 cggaccttgcatatattatgcattgtccataccaactgagctaagctcaca 20383487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 40070979 - 40071029
Alignment:
Q  311 tcggacattgcatatattatgcatt-atcctaccaactgagttaagctcac 360  Q
    |||||| ||||||||||||||||||  || |||||||||||||||||||||    
T  40070979 tcggaccttgcatatattatgcattgttcataccaactgagttaagctcac 40071029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 7230329 - 7230280
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  7230329 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 7230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 13276178 - 13276129
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| | |||||||| ||||||||||||||    
T  13276178 cggaccttgcatatattatgcattgtccctaccaattgagttaagctcac 13276129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 20799406 - 20799455
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| | ||||||||||||| |||||||||    
T  20799406 cggaccttgcatatattatgcattgtccctaccaactgagctaagctcac 20799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 21318271 - 21318312
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctc 358  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  21318271 ttgcatatattatgcattgtccctaccaactgagttaagctc 21318312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 24665003 - 24665052
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  24665003 cggaccttgcatatattatgcattctccataccaactgagctaagctcac 24665052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 25978367 - 25978318
Alignment:
Q  311 tcggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||| ||||  |||||||| |||||||||    
T  25978367 tcggaccttgcatatattatgcattgtccttacaactgagctaagctcac 25978318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 42845074 - 42845025
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  42845074 cggaccttgcatatattatgcattgtcctttccaactgagttaagctcac 42845025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 44815990 - 44815941
Alignment:
Q  312 cggacattgcatatattatgcattatccta-ccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||||||||| ||||||||| | |||||||    
T  44815990 cggaccttgcatatattatgcattatcctatccaactgagcttagctcac 44815941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3336613 - 3336523
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaa 91  Q
    |||||||||||||||||| || ||  ||||||||||||||  |||| ||||||| ||||||||||||| | |   || ||||||||||||||||    
T  3336613 ctgatacgtaacgggatg-gggaatattgtcgttgtattt--atcattccttatatatcattatgaacttgttggtgatggattagatctttaa 3336523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 10261781 - 10261829
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  10261781 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 10261829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 10407062 - 10407102
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcaca 361  Q
    |||||| |||||| |||||||||||||||| ||||||||||    
T  10407062 catataatatgcaatatcctaccaactgagctaagctcaca 10407102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 11949775 - 11949823
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    ||||| |||||||||||||||||| ||| ||||||||||| ||||||||    
T  11949775 cggaccttgcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 13984663 - 13984703
Alignment:
Q  321 catatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  13984663 catatattatgcattgttcctaccaactgagttaagctcac 13984703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 15311994 - 15311922
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    |||| |||||||| ||||| ||||| |||||||||||||||| ||| | |||||||||| | |||| ||||||    
T  15311994 aatagcattttattctatttaagaaattttgaaaagcagtgtgacaatcccgtttgttgttgaactttgattt 15311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 17423189 - 17423237
Alignment:
Q  312 cggacattgcatatattatgcattatc-ctaccaactgagttaagctca 359  Q
    ||||| |||||||||||||||||| || |||||||||||||||| ||||    
T  17423189 cggaccttgcatatattatgcattgtctctaccaactgagttaacctca 17423237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 21562674 - 21562626
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  21562674 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 21562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 24079852 - 24079900
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  24079852 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 24079900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 26926722 - 26926770
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  26926722 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 26926770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 30847993 - 30848045
Alignment:
Q  311 tcggacattgcatatattatgcattatccta-ccaactgagttaagctcacaa 362  Q
    |||||| |||||||| ||||||||| ||| | |||||||||||||||||||||    
T  30847993 tcggaccttgcatattttatgcattgtccaaaccaactgagttaagctcacaa 30848045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 41520997 - 41520957
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagct 357  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  41520997 ttgcatatattatgcattgtctctaccaactgagttaagct 41520957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 43027335 - 43027291
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcaca 361  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  43027335 ttgcatatattatgcattatcactaccaattgagctaagctcaca 43027291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 43330195 - 43330147
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  43330195 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 43330147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 46676510 - 46676558
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    ||||| |||||||||||||||||| ||| ||||||||||| ||||||||    
T  46676510 cggaccttgcatatattatgcattgtccttaccaactgagctaagctca 46676558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 50362152 - 50362200
Alignment:
Q  313 ggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| | ||||||||||||| |||||||||    
T  50362152 ggaccttgcatatattatgcattgtccctaccaactgagctaagctcac 50362200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 51450261 - 51450213
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  51450261 cggaccttgcatatcttatgcattgtcctaccaactaagctaagctcac 51450213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 28205238 - 28205548
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||| || || ||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  28205238 ctgataggtgacaggatggggaaactttgtcgttgtattttcatcattccttatgtatcattacgaaccttttgttggattaaatctttaaggatattta 28205337  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  28205338 tgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaataaattccgctgtgatgaattgatatgttttattgaaactattatttaat 28205436  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  28205437 gaatagcattttatcctattcaaggatttttgaaaagcagtgtaacactccgtttgttgattaactttgattttatttaataatatttatgttgggaaat 28205536  T
Q  299 cggggtgttaca 310  Q
    ||||||||||||    
T  28205537 cggggtgttaca 28205548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 20900478 - 20900168
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20900478 ctgatacgtaacgggatggggaaactttgtcgtagaattttcatcattccttatgtatcattatgaaccttttgttggattaaatctttaaggatattta 20900379  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||||| |    
T  20900378 tgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaaatagttccgctgcgatgaattgatatgttttattgaaacaattatttagt 20900280  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt--tataataatatttatgttgggaaat 298  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||  | |||||||||||| ||||||||||    
T  20900279 gaatagcattttatcctatccaagaatttttgaaaagtagtgtaacactccatttgttgattaactctgatttcatttaataatatttacgttgggaaat 20900180  T
Q  299 cggggtgttaca 310  Q
    ||||||||||||    
T  20900179 cggggtgttaca 20900168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 13529502 - 13529812
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13529502 ctgatacgtaacaggatggggaaactttgtcgttgtattttcatcattccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 13529601  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatttaa 199  Q
    |||| |||| ||||||||  ||||||| ||||    |||||||||||||||||  |||||| | |||||||  |||||||||  ||| || |||| ||||    
T  13529602 tgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaataa--tccgctacaatgaattattatgttttaccgaagactattacttaa 13529699  T
Q  200 tgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttgggaa 296  Q
    | ||||  ||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||||| ||||||||| | |||    ||| || ||||||||||    
T  13529700 taaatagtattttattctatttatggatttttgaaaagtagtgtgacattccgtttgttgatt-actctgattatttaaatgaaattttgatgttgggaa 13529798  T
Q  297 atcggggtgttaca 310  Q
    | ||||||||||||    
T  13529799 aacggggtgttaca 13529812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 36180835 - 36180569
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    |||||||||||| |||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  36180835 tccttatgtatcgttatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 36180737  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36180736 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 36180638  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  36180637 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 36180569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 48 - 311
Target Start/End: Complemental strand, 20630502 - 20630235
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||| ||| |||||||||||||||||||||||    
T  20630502 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgcaaaggatttatttgaaggatgtttaatg 20630404  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20630403 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 20630305  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| ||||||||||||||    
T  20630304 aacactccg-ttgttgatttaactctgattttacttattaatatgactgttgggaagtcggggtgttacat 20630235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 18823098 - 18822826
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||||| |||  |||||||||||||  ||||| ||||||||||||||||||||||| |||   |||||||| ||| |||| ||||     
T  18823098 ctgatacgtaacgggatgag-aaatattgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatccttaaagataa 18823002  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||  ||||||||  ||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||   ||   |||||||    
T  18823001 ttatgttgaggtcatgtgccat-atttatt-gaaagttgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagttattattt 18822905  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||| |||| |||||||| ||||| | |||||||||||||||||||| ||| || |||||||||||||||||||||||||    
T  18822904 aataaatagcattttattctatttatgaatttttgaaaagcagtgtgacattctgtttgttgattaactctgattttat 18822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 18274344 - 18274033
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| |  ||||||| |||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  18274344 ctgatacgtaacgggatggggataaattgtcgtcgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 18274247  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| | || ||||||||  |||| || ||||    ||||||||||||||||  ||||| |||||||||||  ||| |||||  ||| || ||||||    
T  18274246 ttatgtttatgccatgtgccagaatttgttggaagttgttttaatgttgaaaata--ttccgttgcgatgaattattatattttaccgaagactattatt 18274149  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttata-at--aatatttatgttgg 293  Q
    |||| ||| | ||||||| ||||| | | |||||||||||||||||||||| |||||| ||||||| ||||||||| | || ||  ||| ||||||||||    
T  18274148 taataaatgatattttattctatttatggatttttgaaaagcagtgtaacattccgttagttgatt-actctgattatttagatgaaatttttatgttgg 18274050  T
Q  294 gaaatcggggtgttaca 310  Q
    |||| ||||||||||||    
T  18274049 gaaaacggggtgttaca 18274033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 311
Target Start/End: Complemental strand, 18251654 - 18251342
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| |  ||||||| |||||  ||||| |||||||||||||||||||||||  || ||   ||||| || ||||| |||||    
T  18251654 ctgatacgtaacgggatggggataaattgtcgtcgtatt--catcattccttatgtatcattatgaacctggtggtgtttgattaaatatttaaagatat 18251557  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| || | ||||||||  |||| || ||||    ||||||||||||||||  ||||| |||||||||||  |||||||||  ||| || ||||||    
T  18251556 ttatgtttagaccatgtgccataatttgttggaagttgttttaatgttgaaaata--ttccgttgcgatgaattattatgttttaccgaagactattatt 18251459  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttata-at--aatatttatgttgg 293  Q
    |||| ||| | ||||||| ||||| | | |||||||||||||||||||||| |||||| ||||||| ||||||||| | || ||  ||| ||||||||||    
T  18251458 taataaatgatattttattctatttatggatttttgaaaagcagtgtaacattccgttagttgatt-actctgattatttagatgaaatttttatgttgg 18251360  T
Q  294 gaaatcggggtgttacat 311  Q
    |||| |||||||||||||    
T  18251359 gaaaacggggtgttacat 18251342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 18269666 - 18269355
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| |  ||||||| |||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  18269666 ctgatacgtaacgggatggggataaattgtcgtcgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 18269569  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |  | ||||||||  |||| || ||||    ||||||||||||||||  ||||| |||||||||||  ||| |||||  ||| || ||||||    
T  18269568 ttatgtttattccatgtgccataatttgttggaagttgttttaatgttgaaaata--ttccgttgcgatgaattattattttttaccgaagactattatt 18269471  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttata-at--aatatttatgttgg 293  Q
    |||| ||| | ||||||| ||||| | | |||||||||||||||||||||| |||||| ||||||| ||||||||| | || ||  ||| ||||||||||    
T  18269470 taataaatgatattttattctatttatggatttttgaaaagcagtgtaacattccgttagttgatt-actctgattatttagatgaaatttttatgttgg 18269372  T
Q  294 gaaatcggggtgttaca 310  Q
    |||| ||||||||||||    
T  18269371 gaaaacggggtgttaca 18269355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 21118602 - 21118875
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatat 97  Q
    |||||||||||| ||||||||| | | |||||||||| |||||||| | ||||||||||||||||||||| |   |||| ||||  |||||||| |||||    
T  21118602 ctgatacgtaactggatgaggataatatgtcgttgta-tttcatcatttcttatgtatcattatgaacctgttgatgttagatttaatctttaaagatat 21118700  T
Q  98 ttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaatgttg-aaaataaattccgctgcgatgaattgatatgttttattgaaaccattat 195  Q
    || |||| |||| ||||||||| || ||||| ||| | |||||||||||| ||||||  || |||| |||||| ||| |||||||||   |  | ||||     
T  21118701 ttttgttgaggccatgtgccaaggaattattggaa-gttgtttaatgttgaaaaatatttttcgctacgatgatttgttatgttttaacaaggctatta- 21118798  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    | ||| ||||  ||||||| ||||| | | |||||||||||||| ||||||| ||||||||||| || |||||||||    
T  21118799 tgaataaatagtattttattctatttatggatttttgaaaagcaatgtaacattccgtttgttgttttactctgatt 21118875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21182084 - 21182355
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||| ||||  ||||| ||||||||||||||||||||||| |   |||| || || |||||||  |||||    
T  21182084 ctgatacgtaacgggatggggataatttgtcgttatatt--catcattccttatgtatcattatgaacctgttggtgtttgactaaatctttacagatat 21182181  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataa-attccgctgcgatg-aattg-atatgttttattgaaaccatta 194  Q
    ||||||  |||  ||||||| ||||||| ||||||||||||||||||| |||||||  ||||||||| ||| ||| |  | | | || |||||      |    
T  21182182 ttatgtagaggtcatgtgcc-agattta-ttgaaggatgtttaatgttaaaaataattttccgctgcaatgtaatagtttttatgttgttgaa------a 21182273  T
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    || ||| ||||||||||||| ||||  | |||||||||||||||||||| ||| | |||| |||||||||||||||||||||    
T  21182274 ttaaataaataacattttattctatatatgaatttttgaaaagcagtgtgacatttcgttagttgattaactctgattttat 21182355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 14433396 - 14433496
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  14433396 tatcctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgtta 14433494  T
Q  309 ca 310  Q
    ||    
T  14433495 ca 14433496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 8682426 - 8682349
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||| || || |||||||||||||||||| ||| ||| |||||| |||||||||||||||||    
T  8682426 tttaataaatagcattttattctgtttaagaatttttgaaaagcaatgtgacattccgttagttgattaactctgatt 8682349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 24086733 - 24086467
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   ||| |||  |||||||| ||||||| ||||  ||| |||||||||| ||||||| ||||  ||||||| |    
T  24086733 tccttatgtatcattatgaacctgttgatgttgaatttaatctttaaagatatttttgttggggccatgtgccaaggatttattggaagt-tgtttaacg 24086635  T
Q  144 ttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    ||||||| ||  |||||||||| ||| ||| |||| |||     ||| |||||  ||| ||||  ||||||| ||||| ||||| |||||||||| ||||    
T  24086634 ttgaaaaatattttccgctgcgttga-ttgttatgatttgacagaactattatg-aataaatagtattttattctatttaagaaattttgaaaagtagtg 24086537  T
Q  243 taacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||||| ||||||| |||||||||||||||  || ||||||   |||||| || |||||||||||||    
T  24086536 taacactccg-ttgttgatttaactctgattttatttattaatataactgttggcaagtcggggtgttaca 24086467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21529332 - 21529402
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatca-ttatgaacct 70  Q
    |||||||||||||||||| |||   | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  21529332 ctgatacgtaacgggatggggattatatgtcgttgtattttcatcattccttatgtatcatttatgaacct 21529402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 22071530 - 22071430
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||| | ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  22071530 tatcctatttaagaaattttgaaaagcggtgtaacactctg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggtgtta 22071432  T
Q  309 ca 310  Q
    ||    
T  22071431 ca 22071430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 22901392 - 22901490
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| ||||||||||||||    
T  22901392 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttacat 22901490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 47719125 - 47719168
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  47719125 ttgcatatattatgcattatccttaccaactgagttaagctcac 47719168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 310
Target Start/End: Original strand, 16398063 - 16398180
Alignment:
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactcc-gtttgttgattaactctgatt--ttataataatatttatgttg 292  Q
    ||||| |||| |||||||| ||||| ||||||||| |||||| ||||| ||| ||| |||||||| | ||||||||||  || || |||| ||||||||     
T  16398063 ttaataaatagcattttattctatttaagaattttagaaaagtagtgtgacattcccgtttgttgttgaactctgatttattttattaatttttatgttc 16398162  T
Q  293 ggaaatcggggtgttaca 310  Q
    | ||| ||||||||||||    
T  16398163 gaaaaacggggtgttaca 16398180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 16400004 - 16399887
Alignment:
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactcc-gtttgttgattaactctgattt--tataataatatttatgttg 292  Q
    ||||| |||| |||||||| ||||| ||||||||| |||||| ||||| ||| ||| |||||||| | ||| |||||||  | || |||| |||||||||    
T  16400004 ttaataaatagcattttattctatttaagaattttagaaaagtagtgtgacattcccgtttgttgttgaacgctgatttattttattaatttttatgttg 16399905  T
Q  293 ggaaatcggggtgttaca 310  Q
     |||| ||||||||||||    
T  16399904 agaaaacggggtgttaca 16399887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 12212344 - 12212295
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  12212344 cggacgttgcatatattatgcattatccctaccaaatgagttaagctcac 12212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 28039878 - 28039923
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaa 362  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||    
T  28039878 ttgcatatattatgcattgtccttaccaactgagttaagctcacaa 28039923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 29936029 - 29935980
Alignment:
Q  315 acattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  29936029 acattgcatatattatgcattgtccataccaactgagttaaactcacaag 29935980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 33153891 - 33153944
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||| || ||||||||||||||| ||| ||||||||||||||||||||||||    
T  33153891 tcggaccttacatatattatgcattgtccctaccaactgagttaagctcacaag 33153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 33437656 - 33437697
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctca 359  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  33437656 ttgcatatattatgtattgtcctaccaactgagttaagctca 33437697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 45495702 - 45495784
Alignment:
Q  231 tgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  45495702 tgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttacttattaatataattgttgggaagtcggggtgttaca 45495784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 2889939 - 2889987
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  2889939 ggaccttgcatatattatgcattgtccctaccaactgagttaagctcac 2889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 24631882 - 24631838
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  24631882 ttgcatatattatgcattatccttaccaactgagttaaactcaca 24631838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 49868061 - 49868009
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    |||||| |||||||||||||||||||||| || |||||||||||| |||||||    
T  49868061 tcggaccttgcatatattatgcattatccatatcaactgagttaaactcacaa 49868009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 49875612 - 49875660
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  49875612 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 49875660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 5270758 - 5270801
Alignment:
Q  318 ttgcatatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  5270758 ttgcatatattatgcattatctctactaactgagttaagctcac 5270801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 12852223 - 12852266
Alignment:
Q  321 catatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  12852223 catatattatgcattatccctaccaactgagttaacctcacaag 12852266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 18056731 - 18056774
Alignment:
Q  315 acattgcatatattatgcattatcc-taccaactgagttaagct 357  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  18056731 acattgcatatattatgcattgtccttaccaactgagttaagct 18056774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 19396209 - 19396252
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  19396209 ttgcatatattatgcattatccctaccaactgagttaaactcac 19396252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 26086976 - 26086929
Alignment:
Q  314 gacattgcatatattatgcatt-atcctaccaactgagttaagctcac 360  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  26086976 gacattgtatatattatgcattgatcataccaactgagttaagctcac 26086929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 29800576 - 29800533
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  29800576 ttgcatattttatgcattatccttaccaactgagttaagctcac 29800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 33229701 - 33229744
Alignment:
Q  319 tgcatatattatgcattat-cctaccaactgagttaagctcaca 361  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  33229701 tgcatatattatgcattgttcctaccaactgagttaagctcaca 33229744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 3431376 - 3431330
Alignment:
Q  315 acattgcatatattatgcatt-atcctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||    
T  3431376 acattgcatatattatgcattcttcctaccaactgagttaaactcac 3431330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 6000154 - 6000204
Alignment:
Q  311 tcggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||| |||| |||||||||||||| |||||    
T  6000154 tcggaccttgcatatattatgcattgtcctaaccaactgagttaaactcac 6000204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 10356202 - 10356244
Alignment:
Q  319 tgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  10356202 tgcatatattatgcattgtccataccaactgagttaagctcac 10356244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 10385331 - 10385289
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||| |||||||| || ||||||    
T  10385331 ttgcatatattatgcattatcctatcaactgaggtacgctcac 10385289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 28832189 - 28832235
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  28832189 ttgcatatattatgcattgttcataccaactgagttaagctcacaag 28832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 363
Target Start/End: Complemental strand, 35690251 - 35690209
Alignment:
Q  322 atatattatgcattat-cctaccaactgagttaagctcacaag 363  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  35690251 atatattatgtattattcctaccaactgagttaagctcacaag 35690209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 51067912 - 51067958
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||    
T  51067912 ttgcatatattatgtattattcttaccaactgagttaagctcacaag 51067958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 3573345 - 3573390
Alignment:
Q  321 catatattatgcattat-cctaccaactgagttaagctcacaagta 365  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  3573345 catatattatgcattgttcctaccaactgagttaagctcacgagta 3573390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 8253782 - 8253737
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  8253782 ttgcatatattatgcattgtccataccaactgagctaagctcacaa 8253737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 9639829 - 9639878
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| |||||| ||||||||||||||    
T  9639829 cggaccttgcatatattatgcattgtccttaccaagtgagttaagctcac 9639878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 31759905 - 31759954
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||||||| || ||| ||||||||||||||    
T  31759905 cggaccttgcatatattatgcattatccatatcaattgagttaagctcac 31759954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 38448878 - 38448927
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  38448878 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 38448927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 41763167 - 41763216
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||||| ||||||||||||| |||||||||    
T  41763167 cggaccttgcatattttatgcattatccctaccaactgagctaagctcac 41763216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 41972749 - 41972786
Alignment:
Q  319 tgcatatattatgcattat-cctaccaactgagttaag 355  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  41972749 tgcatatattatgcattatccctaccaactgagttaag 41972786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 1408478 - 1408438
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagct 357  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  1408478 ttgcatatattatgcattgtccttaccaactgagttaagct 1408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 6094462 - 6094422
Alignment:
Q  321 catatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  6094462 catatattatacattatccataccaactgagttaagctcac 6094422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 15729470 - 15729430
Alignment:
Q  321 catatattatgcattatc-ctaccaactgagttaagctcac 360  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  15729470 catatattatgcattgtctctaccaactgagttaagctcac 15729430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 17283999 - 17283951
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  17283999 ggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 17283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 30678834 - 30678874
Alignment:
Q  321 catatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  30678834 catatattatgcattgtccctaccaactgagttaagctcac 30678874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 32497499 - 32497539
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagct 357  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  32497499 ttgcatatattatgcattgttcctaccaactgagttaagct 32497539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 34647736 - 34647780
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcacaa 362  Q
    |||||||||||||| ||| | ||||||||||||||||| ||||||    
T  34647736 ttgcatatattatgtattgttctaccaactgagttaagttcacaa 34647780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 43843934 - 43843890
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||    
T  43843934 ttgcatatattatgcattgtccttaccaactaagttaagctcaca 43843890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 45140019 - 45140067
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  45140019 ggaccttgcatatattatgcattgtccataccaactgagctaagctcac 45140067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 1543 - 1234
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||     
T  1543 ctgatatgtaacgggatggggaaactttgtcgttgtattttaatcattccttatgtatcattgtgaaccttttgttggattaaatctttaaggatatttt 1444  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  1443 tgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaatat-ttccgctgcgatgaattgatatgttttattgaaactattatttaat 1346  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  1345 gaatagcattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgtagattaactctgattttatttaataatatttatgttgggaaat 1246  T
Q  299 cggggtgttaca 310  Q
     |||||||||||    
T  1245 tggggtgttaca 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 228; Significance: 1e-125; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 50254 - 49940
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  50254 ctgatacgtaacgggatggggaaactttgtcgttgtattatcatcatttcttatgtatcattatgaaccttttgttggattaaatctttaaagatattta 50155  T
Q  101 t----gttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
    |    ||| ||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50154 tttatgttgaggctatgtgtga-gatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatt 50056  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttggg 294  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  50055 taatgaatagcattttatcctattcaagaaattttgaaaagcagtgtaacactccgtttgttgattaactctgattttatttaataatatttatgttggg 49956  T
Q  295 aaatcggggtgttaca 310  Q
    ||||||||||||||||    
T  49955 aaatcggggtgttaca 49940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 365612 - 365920
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||     
T  365612 ctgatacgtaacgggatggggaaactttgtcgttgtattttaatcattccttatgtatcattgtgaaccttttgttggattaaatctttaaggatatttt 365711  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  365712 tgttgaggctatgtgcc-agatttatttgaaggatgtttaatgttgaaaat-atttccgctgcgatgaattgatatgttttattgaaactattatttaat 365809  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaat 298  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  365810 gaatagcattttatcc-attcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactttgattttatttaataatatttatgttgggaaat 365908  T
Q  299 cggggtgttaca 310  Q
    | ||||||||||    
T  365909 cagggtgttaca 365920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 17273238 - 17273509
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||| ||||||||||||| |||  |||||||||||||  ||||| ||||||||||||||||||||||| |||   |||||||| ||| |||| ||||     
T  17273238 ctgatatgtaacgggatgag-aaatattgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatccttaaagataa 17273334  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| ||||||||| ||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||   ||   |||||||    
T  17273335 ttatgttgaggccatgtgccaa-atttatt-gaaagttgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagttattattt 17273431  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta 275  Q
    ||| ||||  ||||||| ||||| | |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  17273432 aataaatatgattttattctatttatgaatttttgaaaagcagtgtgacattccgtttgttgattaactctgatttta 17273509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 51 - 310
Target Start/End: Original strand, 21416108 - 21416371
Alignment:
Q  51 ttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatgttg 146  Q
    ||||||||| |||||||||| |||   ||| |||  || ||||| ||||||| |||| |||| |||||||||| ||||||| ||| | ||||||| ||||    
T  21416108 ttatgtatcgttatgaacctgttgacgttgaatttcatatttaaagatatttttgttgaggccatgtgccaaggatttatt-gaaagttgtttaacgttg 21416206  T
Q  147 aaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaac 246  Q
    ||||  | ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  21416207 aaaaatatttctgctgcgatgaattgatatgttttattgaaactattatttaatgaataacactttatcttattcaaggatttttgaaaagcagtgtaac 21416306  T
Q  247 actccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||| ||||||||||||| ||||||||  ||||||| |   ||||||| |||||||||||||||    
T  21416307 actccg-ttgttgattaactatgattttacttaataatttaattgttggggaatcggggtgttaca 21416371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 22435158 - 22435444
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||||||||  ||||| ||||||||||||| ||||||||| |||   |||||||  |||||| | ||||     
T  22435158 ctgatacgtaacgggatg-ggaaatattgtcgttgtatt--catcattccttatgtatcaatatgaacctgttggtgttggattgaatcttttaagataa 22435254  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| |||||||| ||||  ||||||||||||||||||  ||||||||||||||||||||||||||||   || | |||||||    
T  22435255 ttatgttgaggccatgtgcca-gatttattggaagt-tgtttaatgttgaaaata--ttccgctgcgatgaattgatatgttttaccaaagctattattt 22435350  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttg 292  Q
    ||| ||||  ||||||| ||||| | |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| | |||||||||||||    
T  22435351 aataaatagtattttattctatttatgaatttttgaaaagcagtgtgacatttcgtttgttgtttaactctgattttatta-aatatttatgttg 22435444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 276
Target Start/End: Complemental strand, 20392667 - 20392417
Alignment:
Q  27 ttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg------ttggattagatctttaaggatatttatgttaaggctatgtgccaag 120  Q
    |||||||||||| ||||||| ||||| |||| |||||||||||| |||      |||||||| |||||||| |||| ||||||| |||| ||||||| ||    
T  20392667 ttgtcgttgtatattcatcattccttttgtaacattatgaacctgttggtgttgttggattaaatctttaaagataattatgttgaggccatgtgcc-ag 20392569  T
Q  121 atttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctatt 220  Q
    ||||| ||||| | || |||||||||||||| ||||||| ||||||||||||||||||||||   || |  | ||||||| |||| ||||||||  ||||    
T  20392568 attta-ttgaaagttggttaatgttgaaaat-aattccgttgcgatgaattgatatgttttaccaaagc--taatttaataaatagcattttattttatt 20392473  T
Q  221 caagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
     | |||||||| ||||||| ||| ||| ||||||||||||||||||||||||||||    
T  20392472 tatgaattttttaaaagcaatgtgacattccgtttgttgattaactctgattttat 20392417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 18025180 - 18025454
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatc-attatgaaccttttgt---tggattagatctttaaggata 96  Q
    |||||||||||||||||| ||||| ||| ||||||||  ||| ||| |||||||||||| ||||||||||| ||||   || |||| |||||||| ||||    
T  18025180 ctgatacgtaacgggatggggaaactttatcgttgta--ttcgtcattccttatgtatcaattatgaacctgttgttgctgaattaaatctttaaagata 18025277  T
Q  97 tttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
     ||||||| |||| | ||||||| ||||| ||||||||||||||||||||||||| | |||||||||||||| ||| |||| ||||  ||| | |||| |    
T  18025278 attatgttgaggccaagtgccaa-attta-ttgaaggatgtttaatgttgaaaat-atttccgctgcgatgatttgttatg-tttacagaagctatta-t 18025372  T
Q  197 taatgaataacatttt-atcctattcaagaatttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
    |||| ||||  ||||| || ||||| ||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  18025373 taataaatagtattttcattctatttaagaaattttgaaaagcagtgtgacactccgttttgttggttaactctgattttat 18025454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 20384786 - 20384498
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg------ttggattagatctttaagga 94  Q
    ||||||||||||| |||| |||||  |||||||||||||  ||||| ||||||||||||||||||||||| |||      |||||||| |||||||| ||    
T  20384786 ctgatacgtaacgagatg-ggaaatgttgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttgttggattaaatctttaaaga 20384690  T
Q  95 tatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccatta 194  Q
    || ||||||| |||| |||||||| ||||| || ||| | || |||||||||||||| | ||| | | ||||||||||||||||||||   || | |  |    
T  20384689 taattatgttgaggccatgtgcca-gatttgtt-gaaagttggttaatgttgaaaatta-ttctgttacgatgaattgatatgttttaccaaagcta--a 20384595  T
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttg 292  Q
    |||||| |||| |||||||| ||||| | |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||||    
T  20384594 tttaataaatagcattttattctatttatgaatgtttgaaaagcagtgtgacattccgtttgttgattaactcttattttat-ttaatatttatgttg 20384498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 310
Target Start/End: Original strand, 22060298 - 22060548
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  22060298 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 22060396  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||||  | ||||||||||||||||||||||||||                ||||||| |||||||||||||||||||||||||||||||||||||    
T  22060397 ttgaaaatat-tcccgctgcgatgaattgatatgtttta----------------atgaatagcattttatcctattcaagaatttttgaaaagcagtgt 22060479  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  22060480 aacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggtgttaca 22060548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 32949004 - 32948886
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttg 292  Q
    |||||| ||||  ||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  32949004 tttaataaatagtattttattctatttaagaaattttgaaaaacagtgtaacactccgtttgttgattaactcttattttatttaataatatttatgttg 32948905  T
Q  293 ggaaatcggggtgttacat 311  Q
    |||||||||||||||||||    
T  32948904 ggaaatcggggtgttacat 32948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 15005360 - 15005672
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||  ||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  15005360 ctgatacgtaacgggatg-ggataatttgtcgtcatatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 15005456  T
Q  98 tt-atgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattat 195  Q
    || ||| | |||  ||||||||  ||||||| ||||    ||||||||||||||||  |||| ||| ||||||||  |||||||||  ||| || ||||     
T  15005457 tttatgcttaggtcatgtgccagaatttattggaagttgttttaatgttgaaaata--ttcccctgtgatgaattattatgttttaccgaagactattaa 15005554  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttg 292  Q
    ||||| ||||  ||||||| ||||| | | |||||||||||||||||||||| |||||||||||||| ||||||||| | |||    ||| |||||||||    
T  15005555 ttaataaatagtattttattctatttatggatttttgaaaagcagtgtaacattccgtttgttgatt-actctgattatttaaaagaaatttttatgttg 15005653  T
Q  293 ggaaatcggggtgttacat 311  Q
    ||||| |||| ||||||||    
T  15005654 ggaaaacgggctgttacat 15005672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 23408915 - 23408797
Alignment:
Q  40 ttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgttt 139  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||||||| |||| ||||||| |||| | ||||| |||||  |||||| | |||||    
T  23408915 ttcatcattccttatgtatcattgtgaacctttttttggattaaatctttaa-gataattatgttgaggccacgtgcc-agatt--tttgaaagttgttt 23408820  T
Q  140 aatgttgaaaataaattccgctgc 163  Q
    |||||||||||| |||||||||||    
T  23408819 aatgttgaaaat-aattccgctgc 23408797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 22146467 - 22146567
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  22146467 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggtgtta 22146565  T
Q  309 ca 310  Q
    ||    
T  22146566 ca 22146567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 22522571 - 22522650
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    |||||| ||||||||||||| ||||| ||||| |||||||||||||||| ||| | |||||||||| | |||||||||||    
T  22522571 tttaataaataacattttattctatttaagaaattttgaaaagcagtgtgacattcccgtttgttgttgaactctgattt 22522650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22616238 - 22616177
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    ||||||||||||||||||||||   | | ||||||||||||||||| |||||||||||||||    
T  22616238 ctgatacgtaacgggatgaggattatatatcgttgtattttcatcattccttatgtatcatt 22616177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 21414263 - 21414327
Alignment:
Q  208 attttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    ||||||| ||||| | | |||||||||||||||||||||| ||||||||||| || |||||||||    
T  21414263 attttattctatttatggatttttgaaaagcagtgtaacattccgtttgttgttttactctgatt 21414327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 24708851 - 24708948
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| || ||||||||||    
T  24708851 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcagggtgttaca 24708948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 17613850 - 17613789
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgattttat 276  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  17613850 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttat 17613789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 37999438 - 37999481
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  37999438 ttgcatatattatgcattatccataccaactgagttaagctcac 37999481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 18942960 - 18942915
Alignment:
Q  319 tgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18942960 tgcatatattatgcattatccctaccaactgagctaagctcacaag 18942915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 44523929 - 44524024
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta-taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||||||||||||| || ||||||   ||||||||| | |||||||||||    
T  44523929 ctatttaagaaattttgaaaggcagtgtaacactccg-ttgatgatttaactctgattttattattaatataattgttgggaagttggggtgttaca 44524024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 13357459 - 13357502
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  13357459 ttgcatatattatgcattgtccataccaactgagttaagctcac 13357502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 15079170 - 15079213
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  15079170 ttgcatatattatgcattgtccctaccaactgagttaagctcac 15079213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 23816833 - 23816790
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  23816833 ttgcatatattatgcattatccttaccaactgagctaagctcac 23816790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 33451367 - 33451410
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  33451367 ttgcatatattatgcattatccataccaactgagctaagctcac 33451410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 56822 - 56868
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  56822 ttgcatatattatgcattgtccataccaattgagttaagctcacaag 56868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 989591 - 989637
Alignment:
Q  314 gacattgcatatattatgcattat-cctaccaactgagttaagctca 359  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  989591 gacattgcatatattaggcattatccctaccaactgagttaaactca 989637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 8984512 - 8984554
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  8984512 ttgcatatattatacattatccataccaactgagttaagctca 8984554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 11709036 - 11708986
Alignment:
Q  311 tcggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||| | ||||||||||||| |||||||||    
T  11709036 tcggaccttgcatatattatgcattgtccctaccaactgagctaagctcac 11708986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 30427779 - 30427729
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  30427779 ggaccttgcatatattatgcattgtccataccaactgagctaagctcacaa 30427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 37938545 - 37938495
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||| |||||    
T  37938545 tcggactttgcatatattatgcattatccataccaactgagctaaactcac 37938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 6447238 - 6447189
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| |||||    
T  6447238 cggaccttgcatatattatgcattgtccataccaactgagttaaactcac 6447189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 8442505 - 8442546
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctc 358  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  8442505 ttgcatatattatgcattgtccttaccaactgagttaagctc 8442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 19778114 - 19778065
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  19778114 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 19778065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 29716712 - 29716761
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||| ||| | |||||||||||||||||||||||    
T  29716712 cggaccttgcatatattatgaattgttcctaccaactgagttaagctcac 29716761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 7553727 - 7553679
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| |||||    
T  7553727 ggaccttgcatatattatgcattgtccctaccaactgagttaaactcac 7553679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 13105137 - 13105093
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||    
T  13105137 ttgcatatattatgcattgtccctaccaactgagttaatctcaca 13105093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 20665375 - 20665423
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  20665375 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 20665423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 30550738 - 30550786
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  30550738 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 30550786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 30623336 - 30623292
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  30623336 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 30623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 32421618 - 32421566
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||  ||| ||| ||||||||||||||||||||||||    
T  32421618 cggaccttgcatatattatatattgtccataccaactgagttaagctcacaag 32421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 42575977 - 42576017
Alignment:
Q  315 acattgcatatattatgcattatcc-taccaactgagttaa 354  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  42575977 acattgcatatattatgcattatccataccgactgagttaa 42576017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 44215487 - 44215535
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  44215487 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 44215535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 22771 - 23081
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtcctt-atgtatcattatgaaccttttgttggattagatctttaaggatattt 99  Q
    |||||||||||| ||||| ||||| ||  |||||| ||||| |||| ||||| |||||||||| |||||||||| |||||||| ||||||||||||||||    
T  22771 ctgatacgtaaccggatggggaaacttattcgttgcattttaatcattcctttatgtatcattgtgaaccttttattggattaaatctttaaggatattt 22870  T
Q  100 atgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaa 199  Q
     |||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||| |||||||||    
T  22871 ttgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaatat-ttccactgcgatgaattgacatgttttattgaaactattatttaa 22968  T
Q  200 tgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  22969 tgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactcagtttgttgattaactctgattttatttaataatctttatgttgggaaa 23068  T
Q  298 tcggggtgttaca 310  Q
    |||||||||||||    
T  23069 tcggggtgttaca 23081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 8963 - 8651
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    ||||||||||| | |||| ||||| || ||||||||||||| |||| ||||||||||||||| |||||| |||||||||||| ||||| ||| ||||||     
T  8963 ctgatacgtaatgagatggggaaacttggtcgttgtattttaatcattccttatgtatcattgtgaaccctttgttggattaaatcttcaagaatattt- 8865  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8864 tgttgaggctatgtgcca-gttttatttgaaggatgtttaatgttgaaaatat-ttccgctgcgatgaattgatatgttttattgaaactattatttaat 8767  T
Q  201 gaataacattttatcctattcaagaatttttg-aaaagcagtgtaacactccgtttgttgatt-aactctgatttta--taataatatttatgttgggaa 296  Q
    ||||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  8766 gaatagcattttatcctattaaagaatttttgaaaaaacagtgtaacactccgtttgttgattaaactctgattttatttaataatatttatgttgggaa 8667  T
Q  297 atcggggtgttacatc 312  Q
    ||||||||||||||||    
T  8666 atcggggtgttacatc 8651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 35537 - 35735
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatattta 100  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  35537 ctgatatgtaacgggatggggaaactttgtcgttgtattttcatcattccttatgtatcactatgaaccttttgttggattaaatctttaaggatattta 35636  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35637 tgttgaggctatgtgcc-agatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaactattatttaat 35735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 75 - 310
Target Start/End: Original strand, 43 - 280
Alignment:
Q  75 ttggattagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgat 174  Q
    |||||||| |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  43 ttggattaaatctttaaagatatttatgttgaggctatgtgcca-gatttatttgaaggatgtttaatgttgaaaatat-ttccgctgcgatgaattgat 140  T
Q  175 atgttttattgaaaccattatttaatgaataacattttatcctattcaagaa--tttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    ||||||||||||||| ||||||||||||||| ||  ||||| |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  141 atgttttattgaaactattatttaatgaatagcaacttatcttattcaggaatttttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 240  T
Q  273 tta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||  ||||||| || | |||||||||  |||||||||||    
T  241 ttatttaataattttcaagttgggaaaatggggtgttaca 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 162 - 311
Target Start/End: Original strand, 8249520 - 8249669
Alignment:
Q  162 gcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgat 261  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8249520 gcgatgaattaatatgttttatcgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgat 8249619  T
Q  262 taactctgattttataataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8249620 taactctgattttataataatatttatgttgggaaatcggggtgttacat 8249669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 48 - 312
Target Start/End: Complemental strand, 48784430 - 48784162
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  48784430 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 48784332  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48784331 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 48784233  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttacatc 312  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||||    
T  48784232 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttacatc 48784162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 130 - 310
Target Start/End: Complemental strand, 16005402 - 16005221
Alignment:
Q  130 aaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaattt 229  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  |||| | ||||||||||||||| |||||||||||||||||||||||    
T  16005402 aaggatgtttaatgttgaaaattatttccgctgcgatgaattgatatgttttgatgaa-ctattatttaatgaatatcattttatcctattcaagaattt 16005304  T
Q  230 ttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  16005303 ttgaaaagcagtgtaacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgttaca 16005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13773421 - 13773110
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    ||||||||| |||||||  ||| | ||||||||||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  13773421 ctgatacgttacgggatagggataatttgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 13773324  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    ||||||||||||||||  ||||| |||||||||||  |||||||||  ||| || ||||||    
T  13773323 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaata--ttccgttgcgatgaattattatgttttaccgaagactattatt 13773226  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttgg 293  Q
    |||| ||||| ||||||| ||||| | | |||||||||||||||||| ||| |||||||||||||| ||||||||| | |||    ||| ||||||||||    
T  13773225 taataaataatattttattctatttatggatttttgaaaagcagtgtgacattccgtttgttgatt-actctgattatttaaatgaaatttttatgttgg 13773127  T
Q  294 gaaatcggggtgttaca 310  Q
    |||| ||||||||||||    
T  13773126 gaaaacggggtgttaca 13773110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 7508113 - 7508385
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||   ||||||||||||  ||||| | ||||||||||||||||||| | |||   |||||||| |||||||   ||      
T  7508113 ctgatacgtaacgggatg-ggaaataatgtcgttgtatt--catcatttcttatgtatcattatgaacatgttggtgttggattaaatctttacaaatga 7508209  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||   || | |||||||    
T  7508210 ttatgttgaggccatgtgcca-gatttattggaagt-tgtttaatgttgaaaataa-ttccgctgcgatgaattgatatggtttaccaaagctattattt 7508306  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||| ||||||||||||| | ||| | |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||    
T  7508307 aataaataacattttattccatttatgaatttttaaaaagcagtgtgacattccgtttgttgattaactctgattttat 7508385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 10628961 - 10629225
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| ||||||||   |  |||| ||||| |||||||| |||||    
T  10628961 ctgatacgtaacgggatggggaaaccttgtcgttgtattttcatcattccttatgtatcaatatgaacccgttggtgtttgattaaatctttaaagatat 10629060  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    |||||||||||||||||  || ||||| |||||||  |||||||||  ||| || |||| |    
T  10629061 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaataa--tctgctgcaatgaattattatgttttaccgaagactattact 10629158  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatta 263  Q
    |||| ||||| ||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||||||    
T  10629159 taataaataatattttattctatttatggatttttgaaaagtagtgtgacattccgtttgttgatta 10629225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 10638656 - 10638920
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| ||||||||   |  |||| ||||| |||||||| |||||    
T  10638656 ctgatacgtaacgggatggggaaaccttgtcgttgtattttcatcattccttatgtatcaatatgaacccgttggtgtttgattaaatctttaaagatat 10638755  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    |||||||||||||||||  || ||||| |||||||  |||||||||  ||| || |||| |    
T  10638756 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaataa--tctgctgcaatgaattattatgttttaccgaagactattact 10638853  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatta 263  Q
    |||| ||||| ||||||| ||||| | | |||||||||||| ||||| ||| |||||||||||||||    
T  10638854 taataaataatattttattctatttatggatttttgaaaagtagtgtgacattccgtttgttgatta 10638920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 15732266 - 15732552
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatat 97  Q
    |||||||||||||||||||| |||  || ||||||||||  ||||| ||||||||||||||||||||||| |   |||| ||||| ||||||||||||||    
T  15732266 ctgatacgtaacgggatgag-aaatattatcgttgtatt--catcattccttatgtatcattatgaacctgttagtgttagattaaatctttaaggatat 15732362  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaa-tgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
    ||||||| || | ||||||| ||||||||| ||| | ||||||| |||||||||| |||| ||||||||||| |||||||||||||   || | |||||     
T  15732363 ttatgttgagaccatgtgcc-agatttattggaa-gttgtttaattgttgaaaat-aatttcgctgcgatgatttgatatgttttaccaaagctattatg 15732459  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttg 292  Q
    |||| ||||  ||||||| ||||| | | ||||||||||||   ||| ||| |||||||||||||||||||| |||||| | ||||||||| ||||    
T  15732460 taataaatagtattttattctatttatggatttttgaaaag--ttgtgacattccgtttgttgattaactctaatttta-attaatatttacgttg 15732552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 14417019 - 14417292
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatca-ttatgaaccttttgtt---ggattagatctttaaggata 96  Q
    |||||||||||||||||| ||||| ||| ||||| ||||  ||||| ||||||||||||| |||||||||| |||||   | |||| |||||||| ||||    
T  14417019 ctgatacgtaacgggatggggaaactttatcgttatatt--catcattccttatgtatcaattatgaacctgttgttactgaattaaatctttaaagata 14417116  T
Q  97 tttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
     ||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||| | |||||||||||||| ||| |||| ||||  ||| | |||| |    
T  14417117 attatgttgaggccaagtgccaa-atttatt-gaaggatgtttaatgttgaaaat-atttccgctgcgatgatttgttatg-tttacagaagctatta-t 14417211  T
Q  197 taatgaataacatttt-atcctattcaagaatttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
    |||| ||||  ||||| || ||||| ||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  14417212 taat-aatagtattttcattctatttaagaaattttgaaaagcagtgtgacactccgttttgttggttaactctgattttat 14417292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 276
Target Start/End: Original strand, 14107106 - 14107335
Alignment:
Q  48 tccttatgtatca-ttatgaaccttttgttgg---attagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatg 143  Q
    ||||||||||||| |||||||||| ||||||    |||| |||||||| |||| ||||||| |||| | ||||||| ||||||| |||||||||||||||    
T  14107106 tccttatgtatcaattatgaacctgttgttgctgaattaaatctttaaagataattatgttgaggccaagtgccaa-atttatt-gaaggatgtttaatg 14107203  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacatttt-atcctattcaagaatttttgaaaagcagtg 242  Q
    |||||||| | |||||||||||||| ||| |||| ||||  ||| | ||| |||||| ||||  ||||| || ||||| ||||| |||||||||||||||    
T  14107204 ttgaaaat-atttccgctgcgatgatttgttatg-tttacagaagctatt-tttaataaatagtattttcattctatttaagaaattttgaaaagcagtg 14107300  T
Q  243 taacactccg-tttgttgattaactctgattttat 276  Q
    | |||||||| ||||||| ||||||||||||||||    
T  14107301 tgacactccgttttgttggttaactctgattttat 14107335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 12202734 - 12202815
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    |||||| ||||  ||||||| ||||| ||||||||| |||||||||||| ||| || ||| |||||||||||||||||||||    
T  12202734 tttaattaatagtattttattctatttaagaattttcgaaaagcagtgtgacattctgttagttgattaactctgattttat 12202815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39996325 - 39996386
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    |||||||||||||||||| ||| | |||||||||| |||||||||| |||||||||||||||    
T  39996325 ctgatacgtaacgggatggggataatttgtcgttgaattttcatcattccttatgtatcatt 39996386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 15724854 - 15724780
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    |||| ||||| || ||||| | |||||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  15724854 aatagcatttcattctatttatgaatttttgaaaagtagtgtgacattccgttagttgattaactctgattttat 15724780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 36755054 - 36755015
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36755054 catatattatgcattgtcctaccaactgagttaagctcac 36755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 36760851 - 36760812
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36760851 catatattatgcattgtcctaccaactgagttaagctcac 36760812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 39996525 - 39996596
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt 273  Q
    |||| |||||||| ||||| | |||||||||||||||||||  ||| |||||| | ||||||||||||||||    
T  39996525 aatagcattttattctatttatgaatttttgaaaagcagtgccacattccgttagatgattaactctgattt 39996596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 4047828 - 4047786
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  4047828 ttgcatatattatgcattatcctatcaactgagctaagctcac 4047786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 22991409 - 22991455
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  22991409 ttgcatatattatgcattgtccataccaactgagttaagctcacaag 22991455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 711502 - 711615
Alignment:
Q  28 tgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg----ttggattagatctttaaggatatttatgttaaggctatgtgccaagatt 123  Q
    ||||||||||||  ||||| | ||||||||||||||||||||| |||    |||||||| ||| |||| |||| ||||||| |||| ||||||| |||||    
T  711502 tgtcgttgtatt--catcatttcttatgtatcattatgaacctgttggtgtttggattaaatccttaaagataattatgttgaggccatgtgcc-agatt 711598  T
Q  124 tatttgaaggatgtttaa 141  Q
    || ||||| |||||||||    
T  711599 ta-ttgaaagatgtttaa 711615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 153
Target Start/End: Complemental strand, 15725005 - 15724900
Alignment:
Q  49 ccttatgtatcattatgaaccttttgttg---gattagatctttaaggatatttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgtt 145  Q
    ||||||||||| |||||||||| ||| ||   ||||  |||||||| |||||||||||| |||| ||||||| ||||||| ||| ||| |||||||||||    
T  15725005 ccttatgtatctttatgaacctgttgatgttagatttaatctttaaagatatttatgttgaggccatgtgcc-agattta-ttggaggttgtttaatgtt 15724908  T
Q  146 gaaaataa 153  Q
     |||||||    
T  15724907 aaaaataa 15724900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 44941431 - 44941472
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctc 358  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  44941431 ttgcatatattatgcattatccctaccaactgagttaagctc 44941472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 5833086 - 5833042
Alignment:
Q  317 attgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  5833086 attgcatatattatgcattatccctaccaactgagctaagctcac 5833042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 8615073 - 8615021
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcacaa 362  Q
    |||||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  8615073 tcggaccttgcatatattatgcattgtccttaccaactgagctaagctcacaa 8615021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 21322223 - 21322175
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  21322223 ggaccttgcatacattatgcattatccttaccaactgagttaagctcac 21322175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 29926421 - 29926465
Alignment:
Q  313 ggacattgcatatattatgcattatcctaccaactgagttaagct 357  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||    
T  29926421 ggacattgcatatatcatgcattgtcctacaaactgagttaagct 29926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 37230046 - 37230090
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcaca 361  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  37230046 ttgcatatattatgcattttccttaccaactgagttaagctcaca 37230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 10242528 - 10242481
Alignment:
Q  313 ggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||||    
T  10242528 ggaccttgcatatattatgcatttatctaccaactgagttaagctcac 10242481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 21164780 - 21164819
Alignment:
Q  322 atatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21164780 atatattatgcattatccataccaactgagttaagctcac 21164819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 26816682 - 26816725
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  26816682 ttgcatatattatgcattatccctaccaactgagctaagctcac 26816725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 10244776 - 10244727
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  10244776 cggaccttgcatatattatgcattgtccataccaactgagctaagctcac 10244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 19599194 - 19599145
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| |||||    
T  19599194 cggaccttgcatatattatgcattgtccataccaactgagttaaactcac 19599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 19626537 - 19626586
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| |||  ||||||||||||||||||||    
T  19626537 cggaccttgcatatattatgcattgtccaaaccaactgagttaagctcac 19626586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 23221432 - 23221391
Alignment:
Q  321 catatattatgcattatc-ctaccaactgagttaagctcaca 361  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  23221432 catatattatgcattgtctctaccaactgagttaagctcaca 23221391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 25923434 - 25923389
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaagctcacaa 362  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||    
T  25923434 ttgcatatattatgcattatccctactaactgatttaagctcacaa 25923389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 30793065 - 30793110
Alignment:
Q  319 tgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||    
T  30793065 tgcatatactatgcattgtccataccaactgagttaagctcacaag 30793110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 354
Target Start/End: Original strand, 39458562 - 39458599
Alignment:
Q  318 ttgcatatattatgcattat-cctaccaactgagttaa 354  Q
    |||||||||||||||||||| |||||||||||||||||    
T  39458562 ttgcatatattatgcattatccctaccaactgagttaa 39458599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 46987135 - 46987086
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  46987135 cggaccttgcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 16929747 - 16929844
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgattttat--aataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||| ||| |||||||||| ||| |||||||  ||||||||||||||  | ||||||   ||||||||| |||||||||||||    
T  16929747 ctatttaagaaattttgaaaggcaatgtaacactctgtt-gttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttaca 16929844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 20085771 - 20085819
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| || |||| |||||||||| |||||    
T  20085771 cggaccttgcatatattatgcattgtcttaccgactgagttaaactcac 20085819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 20763203 - 20763155
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  20763203 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 20763155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 21105646 - 21105602
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  21105646 ttgcatatattatgcattttccataccaactgagctaagctcaca 21105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 21554947 - 21554995
Alignment:
Q  313 ggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||| |||||||||||| ||||||| |||||||||| ||||||||||||    
T  21554947 ggaccttgcatatattaagcattatccctaccaactaagttaagctcac 21554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 24991824 - 24991780
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcaca 361  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  24991824 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 24991780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 25888949 - 25888897
Alignment:
Q  312 cggacattgcatatattatgcattatcct-accaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||  |||| |||||||||| ||||||||||||    
T  25888949 cggaccttgcatatattatgcatcgtccttaccaactgagctaagctcacaag 25888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 28012635 - 28012675
Alignment:
Q  321 catatattatgcattatcct-accaactgagttaagctcac 360  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  28012635 catatattatgcattgtccttaccaactgagttaagctcac 28012675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 29488769 - 29488721
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  29488769 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 29488721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 33232409 - 33232457
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  33232409 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 33232457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 34000302 - 34000262
Alignment:
Q  321 catatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  34000302 catatattatgcattatccttatcaactgagttaagctcac 34000262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 34284551 - 34284599
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  34284551 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 34284599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 37516814 - 37516866
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||| ||||||||| ||| ||| ||||||||||||||||||||    
T  37516814 cggaccttgcatatgttatgcattgtccatactaactgagttaagctcacaag 37516866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 39043796 - 39043756
Alignment:
Q  320 gcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  39043796 gcatatattatgcattgtccataccaactgagttaagctca 39043756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 47342446 - 47342494
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||||    
T  47342446 cggaccttgcatatattatgcattgtccaaaccaactgagttaagctca 47342494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21998882 - 21999154
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  ||||| |||||||  ||||| ||||||||||||||||||||||| |||   |||||||| |||||||| ||||     
T  21998882 ctgatacgtaacgggatg-ggaaatattgtctttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatctttaaagataa 21998978  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||   || | |||||||    
T  21998979 ttatgttgaggccatgtgcca-gatttatttgaagt-tgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagctattattt 21999075  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||| ||||||||||||| ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  21999076 aataaataacattttattctatttatgaatttttgaaaagcagtgtgacattccgtttgttgattaactctgattttat 21999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 143 - 276
Target Start/End: Original strand, 24278314 - 24278447
Alignment:
Q  143 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  24278314 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaacctttatttaatgaatagcattttatcctatttaagaatttttgaaaagcagtg 24278413  T
Q  243 taacactccgtttgttgattaactctgattttat 276  Q
    | ||||||||||||||||||||||||||||||||    
T  24278414 tgacactccgtttgttgattaactctgattttat 24278447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 24383899 - 24383766
Alignment:
Q  143 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtg 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  24383899 gttgaaaataaattccgctgcgatgaattgatatgttttattgaaacctttatttaatgaatagcattttatcctatttaagaatttttgaaaagcagtg 24383800  T
Q  243 taacactccgtttgttgattaactctgattttat 276  Q
    | ||||||||||||||||||||||||||||||||    
T  24383799 tgacactccgtttgttgattaactctgattttat 24383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21981503 - 21981775
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| | |||  ||||| |||||||  ||||| ||||||||||||||||||||||| |||   |||||||| |||||||| ||||     
T  21981503 ctgatacgtaacgggatg-gaaaatattgtctttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatctttaaagataa 21981599  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| ||||| || ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||   || | |||||||    
T  21981600 ttatgttgaggccatgtgcca-gatttgttagaagt-tgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagctattattt 21981696  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||| |||| |||||||| ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  21981697 aataaatagcattttattctatttatgaatttttgaaaagcagtgtgacattccgtttgttgattaactctggttttat 21981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 8953477 - 8953749
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||||| |||  |||||||||||||  ||||| ||||||||||||||||||||||| |||   |||||||| ||| |||| ||||     
T  8953477 ctgatacgtaacgggatgag-aaatattgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatccttaaagataa 8953573  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||| ||| |||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||   ||   |||||||    
T  8953574 ttatgttgaggcgatgtacca-gatttatt-gaaagttgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagttattattt 8953670  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    ||| |||| |||||||| || || | |||||||||||||||||||| ||| |  ||||||||||||||||| |||||||    
T  8953671 aataaatatcattttattctttttatgaatttttgaaaagcagtgtgacattttgtttgttgattaactctaattttat 8953749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 21559958 - 21560242
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatattta 100  Q
    ||||||||| ||||||| |||  |||||||||||||  ||||| | |||||||||||||||||||||  ||   |||||||| |||||||| ||||  ||    
T  21559958 atacgtaacaggatgag-aaatattgtcgttgtatt--catcatttcttatgtatcattatgaacctgctggtgttggattaaatctttaaagataaata 21560054  T
Q  101 tgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaat 200  Q
    |||| |||| |||||||| |||||||| ||| | ||||||||||||||||||| ||| ||||| |||| |||||||||||||   || | ||||||||||    
T  21560055 tgttgaggccatgtgcca-gatttatt-gaaagttgtttaatgttgaaaataatttc-gctgcaatgagttgatatgttttaccaaagctattatttaat 21560151  T
Q  201 gaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatatttatgttg 292  Q
     | ||  ||||||| ||||| | |||||||||||||||||||| ||| ||| ||||| |||||||||| |||||||  ||||||||||||||    
T  21560152 aactagtattttattctatttatgaatttttgaaaagcagtgtgacattccttttgtggattaactcttattttat-ttaatatttatgttg 21560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 310
Target Start/End: Original strand, 21906385 - 21906468
Alignment:
Q  229 tttgaaaagcagtgtaacactccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||| ||||||||| ||||||||||||    
T  21906385 tttgaaaagcagtgtgacactccgtttgttgattaactctgattttatttaataatttttaagttgggaaaacggggtgttaca 21906468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 21906194 - 21906387
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||| ||||| |||   |||||||||||||  |||| |||||||||| |||||||||| | |||   ||||||||||||||||| || |     
T  21906194 ctgatacgtaacggaatgag-aaataatgtcgttgtattt--atcattccttatgtaccattatgaacttgttggtgttggattagatctttaaagacaa 21906290  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
     | |||| ||||  ||||| | || ||||| ||| | ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  21906291 at-tgttgaggccttgtgcta-gacttatt-gaaagttgtttaacgttgaaaataaattctgttgcgatgaattgatatgttttattgaaactattattt 21906387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 26705774 - 26705697
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||  ||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  26705774 tttaataaatagcattttactctatttaagaatttttgaaaagcagtgtgacattccgttagttgattaactctgatt 26705697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 26975507 - 26975430
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||||| |||| |||||||  ||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  26975507 tttaataaatagcattttactctatttaagaatttttgaaaagcagtgtgacattccgttagttgattaactctgatt 26975430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 40056603 - 40056654
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  40056603 ggacattgcatatattatgcattgtccttaccaactgagttaagctcacaag 40056654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 16260746 - 16260844
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| ||||||||||||||    
T  16260746 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttacat 16260844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 22597981 - 22598079
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| ||||||||||||||    
T  22597981 ctattgaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttacat 22598079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 16257152 - 16257249
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| |||||||||||||    
T  16257152 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttaca 16257249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 22590871 - 22590968
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| |||||||||||||    
T  22590871 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttaca 22590968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 22594426 - 22594523
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||  ||  |||||   ||||||||| |||||||||||||    
T  22594426 ctatttaagaaattttgaaaagcagtgtaacactccg-ttgttgatttaaactctgattttatttataaatataattgttgggaagtcggggtgttaca 22594523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 4396848 - 4396756
Alignment:
Q  222 aagaatttttgaaaagcagtgtaacactccgtttgttgatt--aactctgatttta--taataatatttatgttgggaaatcggggtgttacat 311  Q
    ||||| |||||||| |||||||||||||||| |||||||||  |||||||||||||  || ||||||   ||||||||| ||||||||||||||    
T  4396848 aagaaattttgaaaggcagtgtaacactccg-ttgttgatttaaactctgattttatttattaatataattgttgggaagtcggggtgttacat 4396756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 31545914 - 31545871
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  31545914 ttgcatatattatgcattatcctaaccaactgagttaagctcac 31545871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 5107256 - 5107306
Alignment:
Q  311 tcggacattgcatatattatgcatta-tcctaccaactgagttaagctcac 360  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  5107256 tcggaccttgcatatattatgcattattcataccaactgagttaagctcac 5107306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 11720937 - 11720891
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  11720937 ttgcatatattatgcattgtccctaccaactgagttaagctcacaag 11720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 41650950 - 41651000
Alignment:
Q  311 tcggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||| |||||||||||||||||| ||| |||||||||||||||||||||    
T  41650950 tcggaccttgcatatattatgcattgtccataccaactgagttaagctcac 41651000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 5485235 - 5485186
Alignment:
Q  312 cggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||    
T  5485235 cggacattgcatatattatgcattgtccctaccaactgagctaagctcac 5485186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 35413313 - 35413354
Alignment:
Q  321 catatattatgcattatcctaccaactgagttaagctcacaa 362  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  35413313 catatattatgcattgttctaccaactgagttaagctcacaa 35413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 17046377 - 17046334
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  17046377 ttgcatatattatgcattgtccataccaactgagttaagctcac 17046334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 20258588 - 20258545
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  20258588 ttgcatatattatgcattatccataccaactgagttaacctcac 20258545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 22498985 - 22498942
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  22498985 ttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 23671055 - 23670924
Alignment:
Q  48 tccttatgtatcattatgaaccttt---tgttggattagatctttaaggatatttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaatg 143  Q
    ||||| ||||||||||||||||| |   |||||  || ||||||||| ||||||| |||| |||| ||||||||| |||||||| ||| | |||||||||    
T  23671055 tccttgtgtatcattatgaacctgttgatgttgattttgatctttaa-gatatttttgttgaggccatgtgccaaggatttattggaa-gttgtttaatg 23670958  T
Q  144 ttg-aaaataaattccgctgcgatgaattgatat 176  Q
    ||| ||||||  ||||||||| ||||| ||||||    
T  23670957 ttgaaaaatactttccgctgcaatgaactgatat 23670924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 31198752 - 31198709
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  31198752 ttgcatatattatgcattatccttaccaactgagttaagatcac 31198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 33654791 - 33654748
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  33654791 ttgcatatattatgcattgtccctaccaactgagttaagctcac 33654748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 2642778 - 2642824
Alignment:
Q  315 acattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||    
T  2642778 acattgcatatattatgcattatccctaccaactaagttaaactcac 2642824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 19068457 - 19068499
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctca 359  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  19068457 ttgcatatattatgcattatccataccaactgagctaagctca 19068499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 38495185 - 38495139
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||    
T  38495185 ttgcatattttatgcattatccataccaactgagttaagttcacaag 38495139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 43108612 - 43108570
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctca 359  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  43108612 ttgcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 8545001 - 8545050
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| || ||||||||||||||||||    
T  8545001 cggaccttgcatatattatgcattgtccttatcaactgagttaagctcac 8545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 18589879 - 18589928
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| | | |||||||||||||||||||||    
T  18589879 cggaccttgcatatattatgcattgttcataccaactgagttaagctcac 18589928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 34702539 - 34702490
Alignment:
Q  312 cggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||||||    
T  34702539 cggacctttcatatattatgcattgtccttaccaactgagttaagctcac 34702490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 37932379 - 37932330
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  37932379 cggaccttgcatatattatgcattgtccataccaactgagctaagctcac 37932330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 39914950 - 39914901
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||||||||||||| ||| |||||| ||||||||||||||    
T  39914950 cggaccttgcatatattatgcattgtccttaccaattgagttaagctcac 39914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 39980557 - 39980508
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||||||| ||||||||||| |||||||||    
T  39980557 cggaccttgcatattttatgcattatccataccaactgagctaagctcac 39980508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 1746022 - 1745974
Alignment:
Q  318 ttgcatatattatgcattatcct-accaactgagttaagctcacaagta 365  Q
    ||||||||||||| ||||||| | | |||||||||||||||||||||||    
T  1746022 ttgcatatattatacattatctttaacaactgagttaagctcacaagta 1745974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 3671266 - 3671218
Alignment:
Q  313 ggacattgcatatattatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| ||||||||||||| |||||||| || ||||||||||||||||||    
T  3671266 ggaccttgcatatattatacattatccttatcaactgagttaagctcac 3671218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 10704343 - 10704395
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||| ||||||||| ||| ||||||||||| ||||||||||||    
T  10704343 cggaccttgcatattttatgcattgtccataccaactgagctaagctcacaag 10704395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 23422876 - 23422928
Alignment:
Q  308 acatcggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||| || |||||||||||||||||| | ||||||| ||||||||| ||||    
T  23422876 acatcgaactttgcatatattatgcattgttctaccaattgagttaagttcac 23422928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 29144173 - 29144141
Alignment:
Q  329 atgcattatcctaccaactgagttaagctcaca 361  Q
    ||||||| |||||||||||||||||||||||||    
T  29144173 atgcattgtcctaccaactgagttaagctcaca 29144141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 37462160 - 37462112
Alignment:
Q  312 cggacattgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    ||||| |||||||| ||||||||| ||||||||||| || |||||||||    
T  37462160 cggaccttgcatattttatgcattgtcctaccaactaagctaagctcac 37462112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 118; Significance: 5e-60; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 48 - 307
Target Start/End: Original strand, 32531 - 32794
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    ||||||||||||||||||||||| |||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  32531 tccttatgtatcattatgaacctgttgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 32629  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32630 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 32728  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtt 307  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| ||||||||||    
T  32729 aacactccg-ttgttgatttaactctgattttacttattaatataactgttgggaagtcggggtgtt 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 43193 - 42927
Alignment:
Q  48 tccttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatg 143  Q
    |||||||||||||||||||||||  ||   |||  ||  ||| |||| ||||||| |||| |||| | |||||||| |||||||||||||||||||||||    
T  43193 tccttatgtatcattatgaacctgctgatattgattttaatcattaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatg 43095  T
Q  144 ttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgt 243  Q
    |||||||| | | |||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43094 ttgaaaattattcccgctgcgatgaattgatatgttttaatgaa-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgt 42996  T
Q  244 aacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  42995 aacactccg-ttgttgatttaactctgattttacttattaatatgactgttgggaagtcggggtgttaca 42927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 645 - 955
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||| ||||||||  ||||| ||||||||||||||||||||||| |||   |||||||| ||| ||||  |||     
T  645 ctgatacgtaacgggatg-ggaaatattgtggttgtatt--catcattccttatgtatcattatgaacctgttggtgttggattaaatccttaaaaataa 741  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattattt 197  Q
    ||||||| |||| |||||||| |||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||   ||   |||||||    
T  742 ttatgttgaggccatgtgcca-gatttatt-gaaagttgtttaatgttgaaaataa-ttccgctgcgatgaattgatatgttttaccaaagttattattt 838  T
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataataatattta---tgttggg 294  Q
    ||| |||| |||||||| ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||   |||||||    
T  839 aataaatagcattttattctatttatgaatttttgaaaagcagtgtgacattccgtttgttgattaactctgattttat-ttaatatttacgttgttggg 937  T
Q  295 aaatcggggtgttacatc 312  Q
      | ||||||||||||||    
T  938 ttaacggggtgttacatc 955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 51 - 310
Target Start/End: Complemental strand, 1093 - 830
Alignment:
Q  51 ttatgtatcattatgaaccttttg---ttggattagatctttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatgttg 146  Q
    ||||||||| |||||||||| |||   ||| |||  || ||||| ||||||| |||| |||| |||||||||| ||||||| ||| | ||||||| ||||    
T  1093 ttatgtatcgttatgaacctgttgacgttgaatttcatatttaaagatatttttgttgaggccatgtgccaaggatttatt-gaaagttgtttaacgttg 995  T
Q  147 aaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaac 246  Q
    ||||  | |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||    
T  994 aaaaatatttccgctgcgatgaattgatatcttttattgaaactattatttaatgaataacactttatcttattcaaggatttttaaaaagcagtgtaac 895  T
Q  247 actccgtttgttgattaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||||| ||||||||||||||||||||||  ||||||| |   ||||||| |||||||||||||||    
T  894 actccg-ttgttgattaactctgattttacttaataatttaattgttggggaatcggggtgttaca 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 88 - 307
Target Start/End: Original strand, 25409 - 25629
Alignment:
Q  88 ttaaggatatttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattga 186  Q
    |||| ||||||| |||| |||| | |||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| |||    
T  25409 ttaaagatattt-tgttgaggccaagtgccaaggatttatttgaaggatgtttaatgttgaaaattattcccgctgcgatgaattgatatgttttaatga 25507  T
Q  187 aaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataata 283  Q
    | | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||  || |||||    
T  25508 a-ctattatttaatgaatagcattttatcctattcaagaatttttgaaaagcagtgtaacactcc-attattgatttaactctgattttacttattaata 25605  T
Q  284 tttatgttgggaaatcggggtgtt 307  Q
    |   ||||||||| ||||||||||    
T  25606 taactgttgggaagtcggggtgtt 25629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 3421 - 3108
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacc---ttttgttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||   |  |||| ||||| |||||||| |||||    
T  3421 ctgatacgtaacgggatggggaaaccttgtcgttgtattttcatcattccttatgtatcattatgaacccgttgatgtttgattaaatctttaaagatat 3322  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| | || ||||||||| ||||||| ||||    |||||||||||||||||  |||||||| |||||||  |||||||||  ||| || |||| |    
T  3321 ttatgtttatgccatgtgccaaaatttattggaagttgctttaatgttgaaaataa--tccgctgcaatgaattattatgttttaccgaagactattact 3224  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttgg 293  Q
    |||| ||||  ||||||| ||||| | | |||||||||||| | ||| ||| |||||||||||||| ||||||||| | |||    ||| || |||||||    
T  3223 taataaatagtattttattctatttatggatttttgaaaagtattgtgacattccgtttgttgatt-actctgattatttaaatgaaattttgatgttgg 3125  T
Q  294 gaaatcggggtgttaca 310  Q
    |||| ||||||||||||    
T  3124 gaaaacggggtgttaca 3108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 9128 - 8816
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||  ||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| ||| |||| |||||    
T  9128 ctgatacgtaacgggatgtggataatttgtcgtcatatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatccttaaagatat 9031  T
Q  98 tt-atgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattat 195  Q
    || ||||| |||| ||||||||  ||||||| ||||    ||||||||||||||||  |||||||||||||||||  |||||||||  ||  || ||||     
T  9030 tttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaata--ttccgctgcgatgaattattatgttttaccgaggactattaa 8933  T
Q  196 ttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataa---taatatttatgttg 292  Q
    ||||| ||||  ||||||| ||||| | | |||||||||||||||||||||| |||||||||||||| ||||||||| | |||    ||| |||||||||    
T  8932 ttaataaatagtattttattctatttatggatttttgaaaagcagtgtaacattccgtttgttgatt-actctgattatttaaaagaaatttttatgttg 8834  T
Q  293 ggaaatcggggtgttaca 310  Q
    ||||| ||||||||||||    
T  8833 ggaaaacggggtgttaca 8816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 5406 - 5099
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    ||||||| |||||||||| ||| | |||||| |||||||  ||||| ||||| ||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  5406 ctgatacataacgggatggggataatttgtctttgtatt--catcattccttgtgtatcattatgaacctgttggtgtttgattaaatctttaaagatat 5309  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||  | |||||||||||||||  ||||| ||||||||||||  |||||||||  ||| || ||||||    
T  5308 ttatgtttaggccatgtgccagaatttattggaagtttttttaatgttgaaaat--attccactgcgatgaattattatgttttaccgaagactattatt 5211  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataat--aatatttatgttggg 294  Q
    |||| ||||  ||||||| ||||| | |  ||||||||||| ||||| ||| |||||| ||||||| ||||||||| | ||||  ||| |||||||||||    
T  5210 taataaatagtattttattctatttatgggtttttgaaaagtagtgtgacattccgttggttgatt-actctgattat-taatgaaatttttatgttggg 5113  T
Q  295 aaatcggggtgtta 308  Q
    ||| ||||||||||    
T  5112 aaaacggggtgtta 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 276
Target Start/End: Complemental strand, 4945 - 4694
Alignment:
Q  26 tttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatatttatgttaaggctatgtgccaagat 122  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| |   |||| ||||| || ||||| |||||||||| | |||| ||||||||  ||    
T  4945 tttgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatatttaaagatatttatggtgaggccatgtgccagaat 4848  T
Q  123 ttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatttaatgaataacattttatcctattc 221  Q
    ||||| ||| | |||||||||||||||||  ||||||||| ||||||||  |||||||||  ||| || |||||||||| ||||  ||||||| |||||     
T  4847 ttattggaa-gttgtttaatgttgaaaat--attccgctgagatgaattattatgttttaccgaagactattatttaataaatagtattttattctattt 4751  T
Q  222 aagaa-tttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
    | ||| ||||||||||||||||| ||| |||| |||||||||| |||||||||||||    
T  4750 atgaattttttgaaaagcagtgtgacattccgttttgttgatttactctgattttat 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 28530 - 28781
Alignment:
Q  26 tttgtcgttgtattttcatcagtccttatgtatcattatgaaccttt---tgttggattagatctttaaggatatttatgttaaggctatgtgccaagat 122  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| |   |||| ||||| || ||||| |||||||||| | |||| ||||||||  ||    
T  28530 tttgtcgttgtatt--catcattccttatgtatcattatgaacctgttggtgtttgattaaatatttaaagatatttatggtgaggccatgtgccagaat 28627  T
Q  123 ttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatttaatgaataacattttatcctattc 221  Q
    ||||| ||| | |||||||||||||||||  ||||||||| ||||||||  |||||||||  ||| || |||||||||| ||||  ||||||| |||||     
T  28628 ttattggaa-gttgtttaatgttgaaaat--attccgctgagatgaattattatgttttaccgaagactattatttaataaatagtattttattctattt 28724  T
Q  222 aagaa-tttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
    | ||| ||||||||||||||||| ||| |||| |||||||||| |||||||||||||    
T  28725 atgaattttttgaaaagcagtgtgacattccgttttgttgatttactctgattttat 28781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 14493 - 14398
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta-taataatatttatgttgggaaatcggggtgttaca 310  Q
    ||||| ||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||| || ||||||   ||||||||| | |||||||||||    
T  14493 ctatttaagaaattttgaaaagtagtgtaacactccg-ttgttgatttaactctgattttattattaatataactgttgggaagtaggggtgttaca 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 6292 - 6022
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    |||||||||||||||||| ||| | ||||||||| ||||  ||||| ||||||||||||||||||||||  ||| ||   ||||| |||||||| |||||    
T  6292 ctgatacgtaacgggatggggataatttgtcgttctatt--catcattccttatgtatcattatgaacccgttggtgtttgattaaatctttaaagatat 6195  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||  ||||||| ||||    ||||||||||||||||  ||| |||||||||||||  |||||||||  ||| || | || |    
T  6194 ttatgtttaggccatgtgccagaatttattggaagttgttttaatgttgaaaata--ttctgctgcgatgaattattatgttttaccgaagactactact 6097  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgatt 272  Q
    |||| ||||  ||||||| ||||| | | |||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  6096 taataaatagtattttattctatttatggatttttgaaaagcagtgtgacattccggttgttgatt-actctgatt 6022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1908 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 1251 - 1161
Alignment:
Q  186 aaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttat 276  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1251 aaactattatttaatgaataacattttattctatttaagaatttttgaaaagcagtgtgacactccgtttgttgattaactctgattttat 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 58794 - 58523
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt-atgaaccttttgttg---gattagatctttaaggatattt 99  Q
    ||||||||||||||| ||||| ||||||||| ||||  | ||| |||||||||||| || |||||||| ||||||   ||||| |||||||| |||| ||    
T  58794 atacgtaacgggatggggaaactttgtcgttatatt--cgtcattccttatgtatctttcatgaacctgttgttgttggattaaatctttaaagataatt 58697  T
Q  100 atgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaaaccattatttaa 199  Q
    ||||| |||| |||||||||  |||  ||||||||||||||||||||||| ||  ||||||||| |||||||| |||||||||   || | | || | ||    
T  58696 atgttgaggccatgtgccaa--ttttattgaaggatgtttaatgttgaaattattttccgctgcaatgaattgttatgttttaccaaagctagta-tgaa 58600  T
Q  200 tgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccg-tttgttgattaactctgattttat 276  Q
      ||||  ||||||| ||||| | ||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  58599 caaatagtattttat-ctatttacgaaattttgaaaagcagtgtgacactccgttttgttgattaactctgattttat 58523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 13461 - 13201
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    ||||| ||||| |||||||||| | ||||||||||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  13461 ctgattcgtaatgggatgaggataatttgtcgttgtatt--catcattccttatgtatcattatgaacctattggtgtttgattaaatctttaaagatat 13364  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||| ||||||| ||||    |||||||||||||||  |||||| |||||||||||  |||||||||   || || ||  ||    
T  13363 ttatgtttaggccatgtgccaaaatttattggaagttgttttaatgttgaaaat--attccgttgcgatgaattattatgttttaccaaagactat--tt 13268  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatta 263  Q
    |||| ||||  ||||||| ||||| | | |||||||||||||||||| ||| | |||||||| ||||    
T  13267 taataaatagtattttattctatttatggatttttgaaaagcagtgtgacattacgtttgttaatta 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 11456 - 11196
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttgttg---gattagatctttaaggatat 97  Q
    ||||| ||||| |||||||||| | ||||||||||||||  ||||| ||||||||||||||||||||||| ||| ||   ||||| |||||||| |||||    
T  11456 ctgattcgtaatgggatgaggataatttgtcgttgtatt--catcattccttatgtatcattatgaacctattggtgtttgattaaatctttaaagatat 11359  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaataaattccgctgcgatgaattgatatgttttattgaa-accattatt 196  Q
    ||||||| |||| ||||||||| ||||||| ||||    |||||||||||||||  |||||| |||||||||||  |||||||||   || || ||  ||    
T  11358 ttatgtttaggccatgtgccaaaatttattggaagttgttttaatgttgaaaat--attccgttgcgatgaattattatgttttaccaaagactat--tt 11263  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgatta 263  Q
    |||| ||||  ||||||| ||||| | | |||||||||||||||||| ||| | |||||||| ||||    
T  11262 taataaatagtattttattctatttatggatttttgaaaagcagtgtgacattacgtttgttaatta 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 308
Target Start/End: Original strand, 9544 - 9810
Alignment:
Q  43 atcagtccttatgtatcattatgaaccttttgttggattagatctttaaggatatttatgttaaggctatgtgccaa-gatttatttgaaggatgtttaa 141  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| || | |||  ||||||||| | |||||| ||||    |||||    
T  9544 atcagtccttatgtatcattatgaaccttttgttggattaaatcttgaaagatattt-tgatgaggtcatgtgccaagggtttattggaagttgttttaa 9642  T
Q  142 tgttgaaa-ataaattccgctgcgatgaattgatatgttttattgaaaccattatttaatgaataacattttatcctattcaagaatttttgaaaagcag 240  Q
     ||||||| |||  ||||| ||||||| | || ||||||||  |  ||| | || | ||| ||||  ||||||||||||| ||||| |||||||||||||    
T  9643 cgttgaaagatattttccgatgcgatg-actgttatgttttgatagaactaata-tgaataaatagtattttatcctatttaagaaattttgaaaagcag 9740  T
Q  241 tgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| || ||||||| |||||||| ||||||  || |||||||  ||||||||||| |||||||||    
T  9741 tgtaacacttcg-ttgttgatttaactctaattttatttattaatattactgttgggaaataggggtgtta 9810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 10653 - 10711
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    ||||| ||||| |||||||||||||||| ||| | |||||||||||| |||||||||||    
T  10653 ctatttaagaaattttgaaaagcagtgtgacattcccgtttgttgatgaactctgattt 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 158148 - 157841
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaaccttttg---ttggattagatctttaaggatat 97  Q
    |||||||||||||||||| |||||  |||| || || |||||||   ||||||||||||||||||||||| |||   ||| |||  |||||||   ||||    
T  158148 ctgatacgtaacgggatg-ggaaa--ttgttgtcgtgttttcat---tccttatgtatcattatgaacctgttgatgttgaatttaatctttacatatat 158055  T
Q  98 ttatgttaaggctatgtgccaagatttatttgaaggatgtttaatgttgaaaa-taaattccgctgcgatgaattgatatgttttattgaaaccattatt 196  Q
    || |||| |||| |||||||||| |||  ||| | | ||||||| |||||||| ||  |||||||||||||  |||||| ||||||   |||| ||||      
T  158054 ttttgttgaggccatgtgccaaggttttattggaagttgtttaacgttgaaaaatattttccgctgcgatgt-ttgataggttttaacaaaactattaag 157956  T
Q  197 taatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattttataat--aatatttatgttggg 294  Q
     ||| ||||  ||||||| ||||| | | |||||||||||||||||||||| ||||||||||| || ||||||||| ||| ||  ||| |||||||||||    
T  157955 -aataaatagtattttattctatttatggatttttgaaaagcagtgtaacattccgtttgttgttttactctgattatattatgaaatttttatgttggg 157857  T
Q  295 aaatcggggtgttaca 310  Q
    | | || |||||||||    
T  157856 ataacgaggtgttaca 157841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 3750 - 3810
Alignment:
Q  4 atacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattat 64  Q
    ||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||||    
T  3750 atacgtaacgggatgaggataatttgtcgttgaattttcatcattccttatgtatcattat 3810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 3943 - 4018
Alignment:
Q  198 aatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt 273  Q
    ||| |||| |||||||| || || | ||| |||||||||| ||||| ||| |||||| ||||||||||||||||||    
T  3943 aataaatagcattttattctttttatgaaattttgaaaagtagtgtgacattccgttagttgattaactctgattt 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 22201 - 22301
Alignment:
Q  212 tatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgtta 308  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||    
T  22201 tatcctatttaagaaattttgaaaagcggtgtaacactccg-ttgttgatttaactctgattttatttattaatataattgttgggaagtcggggtgtta 22299  T
Q  309 ca 310  Q
    ||    
T  22300 ca 22301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 198368 - 198522
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatta-tgaaccttttgttg--gattagatctttaaggatat 97  Q
    |||||||||||| ||||||||| | | ||||||||||||||| ||| ||||| |||||||||| ||||||| ||| ||   |||  |||||||| |||||    
T  198368 ctgatacgtaacaggatgaggataatatgtcgttgtattttcgtcattccttctgtatcattattgaacctgttgatgttaatttaatctttaatgatat 198467  T
Q  98 ttatgttaaggctatgtgccaag-atttatttgaaggatgtttaatgttgaaaataa 153  Q
    || |||| |||| |||||||||| ||||||| ||| ||||||| |||||||| ||||    
T  198468 tt-tgttgaggccatgtgccaagaatttattggaa-gatgtttgatgttgaatataa 198522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 198548 - 198618
Alignment:
Q  202 aataacattttatcctattcaagaatttttgaaaagcagtgtaacactccgtttgttgattaactctgattt 273  Q
    |||| |||||||| ||||| | |||||||||||||||||||| ||| |||||  |||| |||||||||||||    
T  198548 aatagcattttattctatt-atgaatttttgaaaagcagtgtgacattccgtaagttgtttaactctgattt 198618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40923 - 40983
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcat 61  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||| || |||||||||||    
T  40923 ctgatacgtaacgggatggggaaactttgtcgttgtattttaatcattctttatgtatcat 40983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 33949 - 33870
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaaca-ctccgtttgttgattaactctgattt 273  Q
    |||||| |||| |||||||| ||||||||||| |||||||||||||||| |||  ||||||||||| | |||||||||||    
T  33949 tttaataaatagcattttattctattcaagaaattttgaaaagcagtgtgacatttccgtttgttgttgaactctgattt 33870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 40946 - 40867
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacactc-cgtttgttgattaactctgattt 273  Q
    |||||| |||| |||||||| ||||||||||| |||||||||| ||||| ||| || ||||||||| | |||||||||||    
T  40946 tttaataaatagcattttattctattcaagaaattttgaaaagaagtgtgacattctcgtttgttgttgaactctgattt 40867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 28669 - 28590
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaaca-ctccgtttgttgattaactctgattt 273  Q
    |||||| |||| |||||||| |||||||| || |||||||||||||||| |||  ||||||| ||| | |||||||||||    
T  28669 tttaataaatagcattttattctattcaaaaaattttgaaaagcagtgtgacatttccgtttattgttgaactctgattt 28590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32784 - 32705
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaaca-ctccgtttgttgattaactctgattt 273  Q
    |||||| |||| |||||||| |||||||| || |||||||||||||||| |||  ||||||| ||| | |||||||||||    
T  32784 tttaataaatagcattttattctattcaaaaaattttgaaaagcagtgtgacatttccgtttattgttgaactctgattt 32705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 289 - 359
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatca-ttatgaacct 70  Q
    |||||||||||||||||| |||   | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  289 ctgatacgtaacgggatggggattatatgtcgttgtattttcatcattccttatgtatcatttatgaacct 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12353 - 12416
Alignment:
Q  5 tacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacct 70  Q
    |||||||||||||| ||| | ||||||||||||||  ||||| |||||||||||||||||||||||    
T  12353 tacgtaacgggatggggataatttgtcgttgtatt--catcattccttatgtatcattatgaacct 12416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 14612 - 14675
Alignment:
Q  5 tacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcattatgaacct 70  Q
    |||||||||||||| ||| | ||||||||||||||  ||||| |||||||||||||||||||||||    
T  14612 tacgtaacgggatggggataatttgtcgttgtatt--catcattccttatgtatcattatgaacct 14675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6123 - 6184
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    |||||||||||||||||| |||   | ||||||||||||||||||| |||||||||||||||    
T  6123 ctgatacgtaacgggatggggattatatgtcgttgtattttcatcattccttatgtatcatt 6184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 6808 - 6919
Alignment:
Q  202 aataacattttatcctattc-aagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaa 297  Q
    ||||| ||||||| |||||  |||| |||||||||||||||||||||||| | ||||||| |||||||||||||||  || ||||||   |||||||||     
T  6808 aataatattttattctattttaagactttttgaaaagcagtgtaacactctg-ttgttgatttaactctgattttatttattaatataactgttgggaag 6906  T
Q  298 tcggggtgttaca 310  Q
    |||||||||||||    
T  6907 tcggggtgttaca 6919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 42352 - 42400
Alignment:
Q  318 ttgcatatattatgcattatcctacc-aactgagttaagctcacaagta 365  Q
    |||||||||||||||||| |||| || ||||||| ||||||||||||||    
T  42352 ttgcatatattatgcattgtccttcccaactgagctaagctcacaagta 42400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 310
Target Start/End: Complemental strand, 9837 - 9747
Alignment:
Q  222 aagaatttttgaaaagcagtgtaacactccgtttgttga-ttaactctgatttta--taataatatttatgttgggaaatcggggtgttaca 310  Q
    |||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||  || ||||||   ||||||||| |||||||||||||    
T  9837 aagactttttgaaaagcaatgtaacactccg-ttgttgatttaactctgattttatttattaatataactgttgggaagtcggggtgttaca 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 25437 - 25389
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  25437 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 25389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 34901 - 34949
Alignment:
Q  313 ggacattgcatatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  34901 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcac 34949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 902 - 981
Alignment:
Q  195 tttaatgaataacattttatcctattcaagaatttttgaaaagcagtgtaacact-ccgtttgttgattaactctgattt 273  Q
    |||||| |||| |||||||| ||||| ||||| |||||||||||||||| | | | |||||||||| | |||||||||||    
T  902 tttaataaatagcattttattctatttaagaaattttgaaaagcagtgtgatattcccgtttgttgttgaactctgattt 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 161184 - 161138
Alignment:
Q  318 ttgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  161184 ttgcatattttatgcattgtccataccaactgagttaagctcacaag 161138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 505053 - 505011
Alignment:
Q  318 ttgcatatattatgcattatcctaccaactgagttaagctcac 360  Q
    |||||||| ||||||||| |||||||||||||| |||||||||    
T  505053 ttgcatattttatgcattgtcctaccaactgagctaagctcac 505011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32845 - 32906
Alignment:
Q  1 ctgatacgtaacgggatgaggaaagtttgtcgttgtattttcatcagtccttatgtatcatt 62  Q
    |||||||||||||||||  |||   | |||| |||||||||||||| |||||||||||||||    
T  32845 ctgatacgtaacgggatagggattatatgtcattgtattttcatcattccttatgtatcatt 32906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 93439 - 93496
Alignment:
Q  216 ctattcaagaatttttgaaaagcagtgtaaca-ctccgtttgttgattaactctgatt 272  Q
    ||||| ||||| ||||||||||||||||||||  ||||||||||| | ||||||||||    
T  93439 ctatttaagaaattttgaaaagcagtgtaacatgtccgtttgttgttgaactctgatt 93496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 75232 - 75183
Alignment:
Q  313 ggacattgcatat-attatgcattatcc-taccaactgagttaagctcac 360  Q
    |||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  75232 ggaccttgcatattattatgcattatccataccaactgagttaagctcac 75183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 119622 - 119569
Alignment:
Q  308 acatcggacattgcatatattatgcattat-cctaccaactgagttaagctcac 360  Q
    ||||||||||||||| ||||||| |||| | |||| ||||||||||||||||||    
T  119622 acatcggacattgcaaatattatacattgtccctatcaactgagttaagctcac 119569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 3320 - 3352
Alignment:
Q  30 tcgttgtattttcatcagtccttatgtatcatt 62  Q
    ||||||||||||||||| |||||||||||||||    
T  3320 tcgttgtattttcatcattccttatgtatcatt 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 61591 - 61631
Alignment:
Q  321 catatattatgcattatcct-accaactgagttaagctcac 360  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  61591 catacattatgcattatccttaccaactgagttaagctcac 61631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 75374 - 75322
Alignment:
Q  312 cggacattgcatatattatgcattatcc-taccaactgagttaagctcacaag 363  Q
    ||||| |||||||||||||||||| ||| ||||||||||| | ||||||||||    
T  75374 cggaccttgcatatattatgcattgtccttaccaactgagcttagctcacaag 75322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University