View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3368_high_7 (Length: 255)

Name: NF3368_high_7
Description: NF3368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3368_high_7
NF3368_high_7
[»] chr1 (44 HSPs)
chr1 (1-244)||(28111170-28111413)
chr1 (1-245)||(2794341-2794585)
chr1 (1-225)||(20398967-20399191)
chr1 (1-246)||(23021685-23021933)
chr1 (1-236)||(3796602-3796836)
chr1 (1-246)||(49498266-49498507)
chr1 (1-245)||(27536297-27536541)
chr1 (1-236)||(45960520-45960754)
chr1 (1-244)||(31204952-31205194)
chr1 (1-244)||(37183631-37183873)
chr1 (89-230)||(23441053-23441194)
chr1 (131-235)||(1950222-1950326)
chr1 (154-244)||(20448099-20448189)
chr1 (154-244)||(20533866-20533956)
chr1 (5-188)||(29643044-29643227)
chr1 (1-181)||(34732190-34732370)
chr1 (1-245)||(6070724-6070963)
chr1 (124-238)||(45941663-45941779)
chr1 (124-215)||(33898567-33898659)
chr1 (124-235)||(2405756-2405870)
chr1 (124-188)||(21110971-21111035)
chr1 (124-188)||(41058115-41058179)
chr1 (124-188)||(42022875-42022939)
chr1 (1-48)||(45941530-45941577)
chr1 (102-188)||(50196771-50196858)
chr1 (1-58)||(673023-673080)
chr1 (3-48)||(21018430-21018475)
chr1 (124-184)||(49852955-49853015)
chr1 (1-48)||(21107254-21107301)
chr1 (1-48)||(21111121-21111168)
chr1 (1-48)||(21114461-21114508)
chr1 (69-159)||(30938415-30938505)
chr1 (177-228)||(905463-905514)
chr1 (1-48)||(2405623-2405670)
chr1 (183-230)||(27354719-27354766)
chr1 (1-58)||(905638-905695)
chr1 (1-46)||(1950420-1950465)
chr1 (124-188)||(21018280-21018344)
chr1 (21-178)||(34064994-34065151)
chr1 (1-48)||(41058265-41058312)
chr1 (1-50)||(13430918-13430967)
chr1 (84-143)||(27355173-27355232)
chr1 (163-230)||(17902566-17902633)
chr1 (1-57)||(27354898-27354954)
[»] chr4 (98 HSPs)
chr4 (1-245)||(5673007-5673251)
chr4 (1-227)||(5670689-5670915)
chr4 (1-244)||(34017550-34017791)
chr4 (1-238)||(40616579-40616818)
chr4 (1-235)||(48637617-48637853)
chr4 (1-245)||(52530699-52530945)
chr4 (1-244)||(27014375-27014617)
chr4 (1-235)||(24150784-24151020)
chr4 (1-244)||(15432190-15432436)
chr4 (1-244)||(34319684-34319927)
chr4 (1-212)||(5706504-5706717)
chr4 (1-235)||(44808731-44808965)
chr4 (9-238)||(29324944-29325172)
chr4 (42-182)||(19859332-19859473)
chr4 (1-182)||(53094620-53094802)
chr4 (124-238)||(40902846-40902960)
chr4 (1-245)||(12238377-12238615)
chr4 (65-182)||(19864225-19864342)
chr4 (1-235)||(33927084-33927320)
chr4 (1-187)||(56195639-56195824)
chr4 (137-244)||(18911754-18911861)
chr4 (124-235)||(38283255-38283366)
chr4 (1-176)||(39501760-39501936)
chr4 (124-244)||(27676812-27676932)
chr4 (1-176)||(39498421-39498597)
chr4 (2-235)||(15404854-15405090)
chr4 (1-235)||(56198965-56199203)
chr4 (102-235)||(10386151-10386285)
chr4 (124-239)||(15445124-15445242)
chr4 (1-235)||(3797587-3797818)
chr4 (102-244)||(17670519-17670662)
chr4 (1-188)||(15811959-15812146)
chr4 (108-238)||(10248039-10248170)
chr4 (124-236)||(15429618-15429733)
chr4 (124-236)||(15436232-15436347)
chr4 (107-236)||(11702352-11702482)
chr4 (124-244)||(12786357-12786480)
chr4 (102-235)||(18859985-18860119)
chr4 (1-244)||(35510103-35510349)
chr4 (124-235)||(48415288-48415402)
chr4 (18-246)||(5677181-5677402)
chr4 (67-170)||(22172215-22172318)
chr4 (124-188)||(3720595-3720659)
chr4 (124-235)||(19820949-19821063)
chr4 (124-235)||(40795247-40795361)
chr4 (131-235)||(26060744-26060852)
chr4 (1-58)||(18673035-18673092)
chr4 (4-178)||(33408154-33408324)
chr4 (1-57)||(11195787-11195843)
chr4 (124-188)||(19827656-19827720)
chr4 (1-48)||(15445328-15445375)
chr4 (1-48)||(19827527-19827574)
chr4 (124-183)||(24043957-24044016)
chr4 (1-48)||(38283452-38283499)
chr4 (1-188)||(5681539-5681725)
chr4 (1-50)||(19859483-19859532)
chr4 (1-50)||(19864478-19864527)
chr4 (1-57)||(21419900-21419956)
chr4 (180-236)||(25962351-25962407)
chr4 (124-188)||(52006344-52006408)
chr4 (1-48)||(12783016-12783063)
chr4 (1-48)||(15429819-15429866)
chr4 (1-48)||(15436433-15436480)
chr4 (1-48)||(19820839-19820886)
chr4 (164-230)||(30392847-30392914)
chr4 (1-48)||(40903046-40903093)
chr4 (1-48)||(52006494-52006541)
chr4 (164-229)||(11195948-11196014)
chr4 (164-229)||(53009336-53009402)
chr4 (131-188)||(37103031-37103088)
chr4 (188-236)||(18672855-18672903)
chr4 (1-57)||(25962170-25962226)
chr4 (1-57)||(30392680-30392736)
chr4 (1-57)||(40493321-40493377)
chr4 (1-57)||(46955432-46955488)
chr4 (1-48)||(40795114-40795161)
chr4 (1-48)||(44164894-44164941)
chr4 (3-57)||(53009512-53009566)
chr4 (1-54)||(8871722-8871775)
chr4 (1-82)||(18911610-18911691)
chr4 (164-236)||(21420064-21420137)
chr4 (164-236)||(40493140-40493213)
chr4 (6-54)||(8877457-8877505)
chr4 (1-57)||(29544828-29544884)
chr4 (164-235)||(46955252-46955323)
chr4 (124-176)||(49270925-49270977)
chr4 (1-48)||(24044104-24044151)
chr4 (107-234)||(37739535-37739667)
chr4 (177-230)||(29544650-29544703)
chr4 (152-184)||(11649276-11649308)
chr4 (1-49)||(15164305-15164353)
chr4 (124-184)||(44165027-44165087)
chr4 (124-176)||(52005589-52005641)
chr4 (1-48)||(27677018-27677065)
chr4 (1-48)||(49270791-49270837)
chr4 (1-48)||(48415488-48415539)
chr4 (1-46)||(37103181-37103226)
chr4 (171-230)||(8871483-8871545)
[»] chr3 (122 HSPs)
chr3 (1-245)||(2873761-2874006)
chr3 (1-236)||(30690933-30691168)
chr3 (1-239)||(54723939-54724177)
chr3 (1-244)||(539024-539267)
chr3 (1-244)||(11190724-11190967)
chr3 (1-235)||(6922717-6922952)
chr3 (1-235)||(53816025-53816261)
chr3 (1-235)||(7486768-7487003)
chr3 (1-235)||(24125696-24125931)
chr3 (1-244)||(23298366-23298612)
chr3 (1-217)||(28266114-28266332)
chr3 (1-235)||(24128973-24129208)
chr3 (1-245)||(6434526-6434775)
chr3 (78-244)||(12541053-12541219)
chr3 (1-212)||(18641556-18641769)
chr3 (1-235)||(18644533-18644765)
chr3 (1-244)||(50461303-50461545)
chr3 (1-235)||(16184445-16184684)
chr3 (89-230)||(28327652-28327793)
chr3 (89-230)||(28330977-28331118)
chr3 (1-180)||(32287135-32287320)
chr3 (1-244)||(35412707-35412946)
chr3 (1-234)||(8461257-8461484)
chr3 (124-235)||(43927170-43927281)
chr3 (12-235)||(10106362-10106586)
chr3 (124-230)||(2775815-2775921)
chr3 (124-230)||(2779057-2779163)
chr3 (89-230)||(3306057-3306200)
chr3 (1-187)||(43809777-43809968)
chr3 (3-188)||(28007879-28008066)
chr3 (5-188)||(47051697-47051880)
chr3 (102-245)||(18883432-18883576)
chr3 (124-235)||(45896711-45896826)
chr3 (102-244)||(10963614-10963761)
chr3 (9-188)||(47055131-47055310)
chr3 (102-244)||(2784326-2784469)
chr3 (102-244)||(10960107-10960254)
chr3 (124-235)||(25585007-25585120)
chr3 (124-235)||(49742670-49742783)
chr3 (102-235)||(4250606-4250739)
chr3 (1-245)||(22993449-22993693)
chr3 (102-235)||(2279394-2279528)
chr3 (102-230)||(30157810-30157940)
chr3 (107-235)||(42354177-42354306)
chr3 (102-188)||(10967123-10967209)
chr3 (1-246)||(52200110-52200361)
chr3 (124-230)||(31549514-31549622)
chr3 (1-235)||(52309382-52309612)
chr3 (124-188)||(10902270-10902334)
chr3 (2-58)||(12561174-12561230)
chr3 (124-184)||(20728449-20728509)
chr3 (1-57)||(22416775-22416831)
chr3 (1-57)||(37408878-37408934)
chr3 (164-235)||(48063799-48063871)
chr3 (1-57)||(52990897-52990953)
chr3 (1-48)||(2775679-2775726)
chr3 (1-48)||(2778922-2778969)
chr3 (1-48)||(10902137-10902184)
chr3 (164-230)||(15195109-15195176)
chr3 (1-48)||(16244070-16244117)
chr3 (2-57)||(17528702-17528757)
chr3 (1-48)||(20728597-20728644)
chr3 (1-48)||(25584874-25584921)
chr3 (1-48)||(29343824-29343871)
chr3 (1-48)||(45896578-45896625)
chr3 (164-230)||(46885276-46885343)
chr3 (1-58)||(17039962-17040019)
chr3 (164-228)||(17531423-17531488)
chr3 (1-58)||(27092091-27092148)
chr3 (124-188)||(10881810-10881874)
chr3 (164-235)||(17528521-17528593)
chr3 (124-188)||(19304503-19304567)
chr3 (1-57)||(25442800-25442856)
chr3 (102-235)||(25888246-25888380)
chr3 (1-57)||(46885137-46885193)
chr3 (124-187)||(16244203-16244266)
chr3 (1-56)||(30219947-30220002)
chr3 (164-230)||(34983554-34983621)
chr3 (1-48)||(43927032-43927079)
chr3 (1-48)||(49742869-49742916)
chr3 (164-230)||(54720336-54720403)
chr3 (129-188)||(54736026-54736085)
chr3 (3-49)||(35751640-35751686)
chr3 (131-188)||(10885192-10885249)
chr3 (164-236)||(32366890-32366962)
chr3 (1-58)||(32367070-32367127)
chr3 (8-174)||(54461219-54461381)
chr3 (1-57)||(17141605-17141661)
chr3 (1-57)||(17531597-17531653)
chr3 (1-57)||(48063976-48064032)
chr3 (124-245)||(3840847-3840970)
chr3 (1-44)||(10881677-10881720)
chr3 (177-236)||(11785151-11785210)
chr3 (188-235)||(25442621-25442668)
chr3 (123-186)||(41977330-41977393)
chr3 (2-44)||(3840715-3840757)
chr3 (1-95)||(10885054-10885147)
chr3 (124-178)||(19301087-19301141)
chr3 (1-54)||(11784963-11785016)
chr3 (1-39)||(9392931-9392969)
chr3 (206-244)||(28266333-28266371)
chr3 (164-229)||(35751804-35751869)
chr3 (1-47)||(55031947-55031993)
chr3 (1-47)||(55034807-55034853)
chr3 (1-54)||(3292903-3292955)
chr3 (164-236)||(12560985-12561057)
chr3 (1-50)||(34983801-34983850)
chr3 (1-46)||(41977198-41977243)
chr3 (1-49)||(22783800-22783847)
chr3 (1-49)||(22788164-22788211)
chr3 (9-57)||(25486338-25486386)
chr3 (1-48)||(31549369-31549416)
chr3 (1-48)||(54720168-54720215)
chr3 (130-184)||(282010-282064)
chr3 (164-230)||(17039782-17039851)
chr3 (164-236)||(22416596-22416666)
chr3 (142-188)||(31857913-31857959)
chr3 (164-229)||(25486498-25486566)
chr3 (186-235)||(52991085-52991134)
chr3 (131-218)||(4225641-4225729)
chr3 (1-49)||(17546055-17546102)
chr3 (132-234)||(18542881-18542986)
[»] chr6 (74 HSPs)
chr6 (1-244)||(9954077-9954319)
chr6 (1-236)||(2379344-2379579)
chr6 (1-235)||(3596555-3596791)
chr6 (1-235)||(23384526-23384762)
chr6 (1-236)||(26942208-26942445)
chr6 (1-246)||(1125500-1125745)
chr6 (1-235)||(11402371-11402608)
chr6 (82-237)||(5737836-5737991)
chr6 (1-181)||(14281348-14281530)
chr6 (6-181)||(2372448-2372625)
chr6 (1-178)||(13005303-13005482)
chr6 (124-244)||(30655694-30655814)
chr6 (129-235)||(23381946-23382052)
chr6 (1-188)||(2846418-2846605)
chr6 (124-235)||(11187973-11188085)
chr6 (1-219)||(9839189-9839404)
chr6 (102-248)||(34502559-34502706)
chr6 (124-235)||(23008295-23008409)
chr6 (124-235)||(23779955-23780069)
chr6 (124-229)||(11729112-11729217)
chr6 (56-235)||(28111576-28111759)
chr6 (56-178)||(28107586-28107707)
chr6 (102-235)||(5260023-5260161)
chr6 (102-235)||(14966437-14966571)
chr6 (102-237)||(3826595-3826731)
chr6 (102-235)||(14969917-14970051)
chr6 (1-99)||(22561077-22561173)
chr6 (1-58)||(7128413-7128470)
chr6 (1-58)||(18855978-18856035)
chr6 (124-230)||(23842568-23842676)
chr6 (124-236)||(24371453-24371567)
chr6 (1-57)||(4512590-4512646)
chr6 (164-235)||(19476281-19476353)
chr6 (1-57)||(26896213-26896269)
chr6 (1-48)||(30655558-30655605)
chr6 (3-57)||(32109784-32109838)
chr6 (129-235)||(5617984-5618091)
chr6 (1-58)||(13947132-13947189)
chr6 (1-235)||(17106392-17106620)
chr6 (186-235)||(24155139-24155188)
chr6 (1-58)||(24155319-24155376)
chr6 (165-229)||(24410578-24410643)
chr6 (2-50)||(6513371-6513419)
chr6 (124-188)||(10290221-10290285)
chr6 (124-188)||(23848018-23848082)
chr6 (1-57)||(24400293-24400349)
chr6 (1-57)||(24410412-24410468)
chr6 (177-230)||(4512770-4512823)
chr6 (164-236)||(7128578-7128650)
chr6 (164-236)||(18855798-18855870)
chr6 (164-224)||(24400458-24400519)
chr6 (164-232)||(26896033-26896102)
chr6 (1-50)||(28107748-28107797)
chr6 (1-57)||(11125651-11125707)
chr6 (164-235)||(13947293-13947364)
chr6 (1-57)||(19476116-19476172)
chr6 (164-235)||(28230875-28230946)
chr6 (1-48)||(10290086-10290133)
chr6 (1-48)||(20185858-20185905)
chr6 (1-48)||(22150086-22150133)
chr6 (123-235)||(6514231-6514347)
chr6 (176-229)||(32109963-32110016)
chr6 (12-48)||(5738042-5738078)
chr6 (102-235)||(13095497-13095631)
chr6 (2-48)||(23842762-23842807)
chr6 (1-50)||(2372367-2372416)
chr6 (1-48)||(23847882-23847932)
chr6 (176-230)||(11125472-11125526)
chr6 (165-234)||(11192357-11192429)
chr6 (1-50)||(13021213-13021262)
chr6 (163-215)||(17696864-17696916)
chr6 (164-230)||(22560937-22561005)
chr6 (131-230)||(31123677-31123777)
chr6 (163-230)||(2331555-2331622)
[»] chr2 (79 HSPs)
chr2 (1-235)||(9185201-9185435)
chr2 (1-235)||(9188429-9188663)
chr2 (1-233)||(29440589-29440821)
chr2 (1-244)||(25959457-25959699)
chr2 (1-235)||(37279453-37279687)
chr2 (1-245)||(8888730-8888974)
chr2 (1-239)||(25874275-25874513)
chr2 (1-244)||(25870878-25871121)
chr2 (1-235)||(24238462-24238700)
chr2 (1-244)||(30274536-30274779)
chr2 (1-235)||(24235190-24235428)
chr2 (1-244)||(11347662-11347906)
chr2 (66-235)||(45499135-45499303)
chr2 (1-244)||(33310761-33311003)
chr2 (2-228)||(38015614-38015839)
chr2 (89-230)||(40677541-40677682)
chr2 (1-188)||(36808267-36808453)
chr2 (1-235)||(31427314-31427552)
chr2 (2-235)||(45457257-45457494)
chr2 (124-235)||(42368476-42368587)
chr2 (124-238)||(10601070-10601184)
chr2 (1-235)||(45453968-45454206)
chr2 (109-234)||(3252534-3252658)
chr2 (124-235)||(40781699-40781812)
chr2 (107-236)||(1503198-1503328)
chr2 (107-236)||(1506402-1506532)
chr2 (1-244)||(25138692-25138942)
chr2 (2-250)||(25820602-25820856)
chr2 (102-235)||(13518509-13518643)
chr2 (102-238)||(11060005-11060142)
chr2 (82-188)||(34682872-34682978)
chr2 (124-188)||(15470685-15470749)
chr2 (124-213)||(5105935-5106024)
chr2 (124-236)||(43723927-43724042)
chr2 (1-58)||(27266883-27266940)
chr2 (124-235)||(31585706-31585818)
chr2 (164-229)||(23205431-23205497)
chr2 (164-229)||(23677035-23677101)
chr2 (124-246)||(43207649-43207766)
chr2 (1-58)||(1386376-1386433)
chr2 (1-58)||(9966323-9966380)
chr2 (1-188)||(13971725-13971905)
chr2 (1-58)||(16790711-16790768)
chr2 (124-188)||(6826998-6827062)
chr2 (1-57)||(12219890-12219946)
chr2 (1-48)||(13137035-13137082)
chr2 (1-48)||(15470552-15470599)
chr2 (164-230)||(16179404-16179471)
chr2 (1-48)||(31585904-31585951)
chr2 (1-48)||(40781566-40781613)
chr2 (1-48)||(43207854-43207901)
chr2 (1-48)||(43723794-43723841)
chr2 (1-188)||(26366028-26366205)
chr2 (177-235)||(40258913-40258971)
chr2 (129-235)||(15703747-15703854)
chr2 (129-235)||(15719051-15719158)
chr2 (1-57)||(37937174-37937230)
chr2 (1-57)||(40259094-40259150)
chr2 (1-87)||(22021162-22021251)
chr2 (179-230)||(22631119-22631170)
chr2 (164-229)||(12220057-12220123)
chr2 (164-236)||(1386198-1386270)
chr2 (1-57)||(3875381-3875437)
chr2 (124-188)||(13137115-13137179)
chr2 (1-57)||(22630935-22630991)
chr2 (179-230)||(3875564-3875615)
chr2 (1-48)||(5105821-5105868)
chr2 (1-48)||(5666612-5666658)
chr2 (1-44)||(6826865-6826908)
chr2 (185-236)||(37936993-37937044)
chr2 (124-186)||(5666745-5666806)
chr2 (1-50)||(45493118-45493167)
chr2 (1-50)||(45500860-45500909)
chr2 (164-235)||(16790532-16790603)
chr2 (2-57)||(17877201-17877256)
chr2 (1-48)||(42368675-42368722)
chr2 (102-163)||(11056547-11056608)
chr2 (1-43)||(16179221-16179263)
chr2 (185-230)||(17877390-17877435)
[»] chr8 (65 HSPs)
chr8 (1-245)||(16953886-16954129)
chr8 (1-235)||(25591255-25591489)
chr8 (1-244)||(18825655-18825897)
chr8 (1-158)||(10664008-10664165)
chr8 (1-235)||(18721062-18721291)
chr8 (1-227)||(18824179-18824404)
chr8 (1-235)||(45155040-45155279)
chr8 (113-232)||(5584211-5584330)
chr8 (130-235)||(10664190-10664295)
chr8 (124-238)||(23597440-23597554)
chr8 (1-181)||(25231190-25231372)
chr8 (1-235)||(23643929-23644165)
chr8 (1-139)||(38248270-38248409)
chr8 (1-235)||(22173709-22173933)
chr8 (124-235)||(20887777-20887889)
chr8 (1-235)||(14589395-14589631)
chr8 (102-238)||(14188378-14188515)
chr8 (107-235)||(31986499-31986628)
chr8 (1-182)||(36710466-36710646)
chr8 (2-188)||(14421856-14422039)
chr8 (102-238)||(30645692-30645829)
chr8 (1-235)||(33883122-33883360)
chr8 (89-182)||(37681350-37681442)
chr8 (164-235)||(8911923-8911995)
chr8 (102-235)||(31981567-31981701)
chr8 (102-244)||(20262762-20262905)
chr8 (102-244)||(21049392-21049535)
chr8 (124-188)||(5980115-5980179)
chr8 (164-235)||(10498024-10498096)
chr8 (1-58)||(10498167-10498224)
chr8 (102-235)||(5964463-5964597)
chr8 (1-81)||(12516383-12516462)
chr8 (1-57)||(23619318-23619374)
chr8 (164-235)||(31284948-31285020)
chr8 (129-235)||(4868488-4868596)
chr8 (1-48)||(5584359-5584406)
chr8 (1-48)||(20887644-20887691)
chr8 (164-230)||(44026869-44026936)
chr8 (124-178)||(43681707-43681761)
chr8 (129-235)||(18695752-18695859)
chr8 (124-188)||(12583253-12583317)
chr8 (1-57)||(31284783-31284839)
chr8 (164-230)||(2560829-2560896)
chr8 (2-57)||(44027047-44027102)
chr8 (1-63)||(13196966-13197028)
chr8 (1-54)||(5980270-5980323)
chr8 (3-48)||(25594620-25594665)
chr8 (1-57)||(21279723-21279779)
chr8 (124-235)||(5538543-5538657)
chr8 (163-217)||(21279558-21279613)
chr8 (176-230)||(17931272-17931326)
chr8 (1-51)||(30785029-30785079)
chr8 (3-57)||(33419767-33419821)
chr8 (1-58)||(17931090-17931147)
chr8 (177-230)||(33419944-33419997)
chr8 (164-235)||(23619139-23619210)
chr8 (1-49)||(5613680-5613727)
chr8 (1-48)||(12583117-12583167)
chr8 (164-235)||(23612413-23612485)
chr8 (152-184)||(41836265-41836297)
chr8 (180-219)||(5253334-5253373)
chr8 (1-57)||(2560662-2560718)
chr8 (142-170)||(10664166-10664194)
chr8 (176-229)||(12516226-12516281)
chr8 (165-228)||(13197135-13197198)
[»] chr7 (70 HSPs)
chr7 (1-235)||(45286848-45287084)
chr7 (1-235)||(45290259-45290495)
chr7 (1-231)||(37415206-37415438)
chr7 (1-244)||(23224675-23224920)
chr7 (1-244)||(6603558-6603800)
chr7 (89-230)||(44017561-44017702)
chr7 (1-235)||(16165848-16166082)
chr7 (1-244)||(13449551-13449791)
chr7 (124-235)||(4543029-4543140)
chr7 (124-235)||(4547101-4547212)
chr7 (124-236)||(8277219-8277331)
chr7 (124-244)||(11919623-11919746)
chr7 (107-244)||(22232395-22232533)
chr7 (107-244)||(22254206-22254344)
chr7 (1-235)||(11397828-11398064)
chr7 (102-244)||(5826477-5826620)
chr7 (102-238)||(11825130-11825267)
chr7 (102-235)||(8398037-8398171)
chr7 (1-205)||(2441081-2441293)
chr7 (1-182)||(5241995-5242165)
chr7 (111-234)||(5796760-5796885)
chr7 (102-235)||(26153371-26153505)
chr7 (124-244)||(26557731-26557854)
chr7 (1-188)||(48645573-48645763)
chr7 (1-236)||(10345294-10345523)
chr7 (124-244)||(35961332-35961455)
chr7 (102-235)||(8258105-8258239)
chr7 (1-57)||(14683403-14683459)
chr7 (124-187)||(4595828-4595891)
chr7 (107-215)||(22257470-22257580)
chr7 (1-58)||(26136086-26136143)
chr7 (1-58)||(26144466-26144523)
chr7 (124-188)||(4695713-4695777)
chr7 (124-184)||(9864565-9864625)
chr7 (164-239)||(13842904-13842979)
chr7 (1-48)||(4595977-4596024)
chr7 (1-48)||(11919833-11919880)
chr7 (1-48)||(20594362-20594409)
chr7 (1-57)||(9132720-9132775)
chr7 (1-57)||(13842739-13842795)
chr7 (1-57)||(20080677-20080733)
chr7 (2-57)||(3067936-3067991)
chr7 (1-48)||(4542896-4542943)
chr7 (1-48)||(8277085-8277132)
chr7 (164-230)||(20080499-20080566)
chr7 (124-187)||(22611552-22611615)
chr7 (3-57)||(10469245-10469299)
chr7 (145-234)||(13907578-13907670)
chr7 (164-236)||(26135906-26135978)
chr7 (1-58)||(37166105-37166162)
chr7 (178-230)||(9132544-9132596)
chr7 (164-219)||(10469410-10469466)
chr7 (164-230)||(14683223-14683290)
chr7 (1-48)||(17730913-17730960)
chr7 (1-48)||(26557598-26557645)
chr7 (164-229)||(3067759-3067825)
chr7 (2-48)||(4546969-4547015)
chr7 (177-235)||(37165925-37165983)
chr7 (1-46)||(4695580-4695625)
chr7 (136-237)||(17731064-17731168)
chr7 (1-48)||(9271433-9271480)
chr7 (1-48)||(9864694-9864741)
chr7 (165-235)||(23776170-23776242)
chr7 (204-244)||(18560817-18560857)
chr7 (185-236)||(20595919-20595970)
chr7 (198-244)||(23467014-23467059)
chr7 (170-230)||(709796-709856)
chr7 (207-244)||(37415168-37415205)
chr7 (155-235)||(5747422-5747502)
chr7 (163-230)||(20100917-20100984)
[»] scaffold0381 (1 HSPs)
scaffold0381 (1-244)||(5166-5408)
[»] chr5 (73 HSPs)
chr5 (1-235)||(26752477-26752711)
chr5 (2-235)||(31863828-31864062)
chr5 (1-246)||(41306291-41306537)
chr5 (9-244)||(37215164-37215396)
chr5 (19-238)||(32838007-32838229)
chr5 (4-248)||(43491871-43492116)
chr5 (15-237)||(40915931-40916155)
chr5 (1-244)||(14015906-14016148)
chr5 (1-244)||(22936707-22936947)
chr5 (124-244)||(41876521-41876641)
chr5 (1-235)||(21332448-21332690)
chr5 (1-235)||(7625215-7625453)
chr5 (131-246)||(42063172-42063289)
chr5 (102-239)||(19686388-19686526)
chr5 (124-244)||(34832009-34832131)
chr5 (102-238)||(3195299-3195436)
chr5 (3-188)||(21335517-21335706)
chr5 (102-238)||(30764443-30764580)
chr5 (102-245)||(19689771-19689915)
chr5 (1-182)||(18239336-18239505)
chr5 (102-238)||(30761624-30761761)
chr5 (102-246)||(34652523-34652668)
chr5 (82-229)||(10629407-10629555)
chr5 (102-245)||(28562129-28562273)
chr5 (107-235)||(2453505-2453634)
chr5 (102-244)||(28565698-28565841)
chr5 (102-244)||(26548298-26548441)
chr5 (102-244)||(26551857-26552000)
chr5 (1-56)||(26895559-26895614)
chr5 (124-188)||(30066556-30066620)
chr5 (124-235)||(7271263-7271377)
chr5 (1-58)||(12058445-12058502)
chr5 (1-58)||(20055886-20055943)
chr5 (164-230)||(26907194-26907261)
chr5 (124-235)||(28787093-28787207)
chr5 (1-48)||(41876727-41876774)
chr5 (44-149)||(28441314-28441420)
chr5 (1-58)||(18952805-18952862)
chr5 (1-58)||(23044254-23044311)
chr5 (1-46)||(30066421-30066466)
chr5 (124-188)||(4099349-4099413)
chr5 (1-57)||(12088070-12088126)
chr5 (1-57)||(17664663-17664719)
chr5 (1-49)||(22131342-22131390)
chr5 (124-188)||(33552366-33552430)
chr5 (1-57)||(34132937-34132993)
chr5 (1-57)||(34143168-34143224)
chr5 (1-48)||(7271128-7271175)
chr5 (164-230)||(23044420-23044487)
chr5 (1-48)||(33552233-33552280)
chr5 (1-50)||(26907416-26907465)
chr5 (164-236)||(34132756-34132828)
chr5 (164-236)||(34142987-34143059)
chr5 (177-230)||(35049762-35049815)
chr5 (188-236)||(12088259-12088307)
chr5 (1-57)||(17748552-17748608)
chr5 (1-48)||(11959141-11959188)
chr5 (124-187)||(39192575-39192638)
chr5 (1-90)||(14375715-14375805)
chr5 (2-48)||(39192443-39192489)
chr5 (1-48)||(4099480-4099527)
chr5 (164-230)||(17664830-17664897)
chr5 (131-230)||(20056089-20056190)
chr5 (1-95)||(42063034-42063127)
chr5 (164-236)||(12058265-12058337)
chr5 (164-219)||(11958981-11959037)
chr5 (90-234)||(21915322-21915471)
chr5 (1-57)||(26292903-26292958)
chr5 (108-234)||(31575635-31575764)
chr5 (1-57)||(40583361-40583417)
chr5 (1-48)||(34831876-34831923)
chr5 (177-215)||(22131523-22131561)
chr5 (186-234)||(26293091-26293139)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-248)||(3549-3798)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-244)||(19508-19752)
[»] scaffold1208 (1 HSPs)
scaffold1208 (1-235)||(297-530)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-244)||(243-491)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-244)||(293135-293374)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-244)||(7481-7722)
[»] scaffold2073 (1 HSPs)
scaffold2073 (1-182)||(694-877)
[»] scaffold0962 (1 HSPs)
scaffold0962 (1-244)||(3048-3292)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-188)||(89882-90069)
[»] scaffold1785 (1 HSPs)
scaffold1785 (1-246)||(19-273)
[»] scaffold0035 (3 HSPs)
scaffold0035 (1-246)||(62629-62883)
scaffold0035 (4-56)||(63974-64026)
scaffold0035 (164-230)||(64138-64205)
[»] scaffold0996 (1 HSPs)
scaffold0996 (102-236)||(1690-1829)
[»] scaffold0002 (2 HSPs)
scaffold0002 (21-239)||(118217-118436)
scaffold0002 (129-235)||(99007-99116)
[»] scaffold0007 (3 HSPs)
scaffold0007 (124-230)||(92674-92781)
scaffold0007 (1-48)||(248630-248677)
scaffold0007 (124-188)||(248765-248829)
[»] scaffold0034 (1 HSPs)
scaffold0034 (69-234)||(48182-48348)
[»] scaffold0737 (1 HSPs)
scaffold0737 (130-244)||(7108-7224)
[»] scaffold0014 (2 HSPs)
scaffold0014 (107-235)||(228857-228986)
scaffold0014 (102-235)||(223926-224060)
[»] scaffold0214 (3 HSPs)
scaffold0214 (102-244)||(13824-13967)
scaffold0214 (102-244)||(27840-27983)
scaffold0214 (102-244)||(20274-20417)
[»] scaffold0360 (2 HSPs)
scaffold0360 (102-235)||(6492-6626)
scaffold0360 (102-188)||(2660-2746)
[»] scaffold0233 (1 HSPs)
scaffold0233 (90-234)||(10140-10287)
[»] scaffold0080 (2 HSPs)
scaffold0080 (124-188)||(27356-27420)
scaffold0080 (1-48)||(27221-27268)
[»] scaffold1063 (2 HSPs)
scaffold1063 (124-188)||(2732-2796)
scaffold1063 (1-93)||(2613-2706)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-58)||(57542-57599)
[»] scaffold0048 (2 HSPs)
scaffold0048 (1-58)||(15524-15581)
scaffold0048 (164-235)||(15689-15760)
[»] scaffold1755 (2 HSPs)
scaffold1755 (124-188)||(378-442)
scaffold1755 (1-48)||(233-280)
[»] scaffold0126 (2 HSPs)
scaffold0126 (1-57)||(14273-14329)
scaffold0126 (164-236)||(14092-14164)
[»] scaffold0065 (3 HSPs)
scaffold0065 (164-228)||(58460-58524)
scaffold0065 (3-57)||(58635-58689)
scaffold0065 (185-227)||(58411-58453)
[»] scaffold0015 (2 HSPs)
scaffold0015 (1-48)||(198259-198306)
scaffold0015 (138-188)||(198403-198453)
[»] scaffold0084 (4 HSPs)
scaffold0084 (3-57)||(29479-29533)
scaffold0084 (1-57)||(19392-19448)
scaffold0084 (164-235)||(19557-19628)
scaffold0084 (164-235)||(29636-29707)
[»] scaffold0520 (3 HSPs)
scaffold0520 (124-181)||(8039-8096)
scaffold0520 (124-188)||(1362-1426)
scaffold0520 (1-48)||(8182-8229)
[»] scaffold0062 (2 HSPs)
scaffold0062 (129-235)||(52659-52766)
scaffold0062 (129-235)||(67608-67715)
[»] scaffold1809 (2 HSPs)
scaffold1809 (1-48)||(177-224)
scaffold1809 (124-180)||(310-366)
[»] scaffold0757 (2 HSPs)
scaffold0757 (2-48)||(5465-5511)
scaffold0757 (124-235)||(5597-5711)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-50)||(2966-3015)
[»] scaffold0218 (2 HSPs)
scaffold0218 (164-236)||(10684-10757)
scaffold0218 (1-57)||(10521-10577)
[»] scaffold0056 (1 HSPs)
scaffold0056 (164-236)||(65094-65167)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-50)||(241612-241661)
[»] scaffold0270 (1 HSPs)
scaffold0270 (1-49)||(25-73)
[»] scaffold0038 (2 HSPs)
scaffold0038 (164-235)||(31372-31443)
scaffold0038 (1-58)||(31206-31264)
[»] scaffold0807 (2 HSPs)
scaffold0807 (164-230)||(1850-1917)
scaffold0807 (1-58)||(2026-2083)
[»] scaffold0191 (2 HSPs)
scaffold0191 (164-230)||(4193-4260)
scaffold0191 (1-48)||(4028-4075)


Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28111170 - 28111413
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  28111170 ccaattaggggaacatagatgattcgaaagatctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 28111269  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28111270 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 28111369  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  28111370 tactacttcgatagtatttagtacacttgctaaaatatctatca 28111413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2794341 - 2794585
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  2794341 ccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttttctttccaaaactatctttatattctgtttatttaattttatgcaaa 2794440  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2794441 ccaaaactactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 2794540  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  2794541 tactacttcgatagtatttagtacacttgctaaaagatctatcag 2794585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 20398967 - 20399191
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  20398967 ccaattaggggaacatagatgactcgaaagacctgatctcatctctctcttattctttccaactctatctttattttatgtt-atttaattttatgcaaa 20399065  T
Q  101 ccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    |||||||||||||||||| |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20399066 ccaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaactttattgctaaattgagattaacacagttctcgtgggaacgatattt 20399165  T
Q  200 ttactacttcgatagtatttagtaca 225  Q
    |||||||||| |||||||||||||||    
T  20399166 ttactacttccatagtatttagtaca 20399191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23021933 - 23021685
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23021933 ccaattaggggaacttagatgattcgaaagacctaatctcatctctatcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 23021834  T
Q  101 ccaaaactactgcctca--gacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    ||||||||||||||| |  |  |||||||  |||||| |||||||||||||| || | ||||||||||||||||||||| ||||||| ||||||||||||    
T  23021833 ccaaaactactgccttagggcaactaaaagaaatttatacatcctaaatatttacttgattgctaaattgagattaacagagtcctcatgggaacgatat 23021734  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23021733 ttttactacttcgatagtatttagtacacttgctaaaatatctatcagt 23021685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 3796836 - 3796602
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaatttt-atgcaa 99  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| || || |||| ||||| |||| ||||||    
T  3796836 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctttccaactctatctt-attttatgtt-atttactttttatgcaa 3796739  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  3796738 accaaaactactgcctcatgcactaaaataatttacacatcctaaatattaaacttattgctgaattgagattaacacagtcctcgtgggaacaatattt 3796639  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3796638 ttactacttcgatagtatttggtacacttgccaaaat 3796602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49498507 - 49498266
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    
T  49498507 ccaattaggggaacttagatgattcgaaagacctaatctcatctctctctt------tccaactctatctttatattctgtttatttaattttatgcaaa 49498414  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  49498413 ccaaaactactgcctagggcaactaaaagaaatttacacatcctaaatatttaccttattgctaaattgagattaacacaatcctcgtgggaacgatatt 49498314  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  49498313 tttactacttcgacagtatttagtacgcttgctaaaatatctatcagt 49498266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27536541 - 27536297
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  27536541 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 27536444  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    | | |||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27536443 atc-aaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgtgaacgatat 27536345  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  27536344 ttttactacttcgatagtatttagtacacttgctaaaatatctatcag 27536297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 45960754 - 45960520
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct-cttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |  |||||||  ||||||| || ||||||| |||||| |||||||||    
T  45960754 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctcttcttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 45960657  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45960656 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 45960558  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45960557 tttactacttcgatagtatttggtacacttgccaaaat 45960520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 31204952 - 31205194
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  31204952 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 31205049  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || |||||| ||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31205050 tc-aaaactactgcctcgggcactaaaagaaatttacaaatcatagatataaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 31205148  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||| ||||||||| |||||||||| |||||||| ||||    
T  31205149 tttactacttcaatagtatttggtacacttgccaaaatatctatca 31205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 37183873 - 37183631
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  37183873 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 37183776  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||  |||||    
T  37183775 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacattattgctaaattgagattaacacagtcctcgtggaaataatatt 37183677  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||| | |||||||||| |||||||| ||||    
T  37183676 tttactacttcgatagtatatggtacacttgccaaaatatctatca 37183631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 23441194 - 23441053
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||    
T  23441194 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgccaaattgaaattaacacagtccccgtgg 23441095  T
Q  189 gaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  23441094 gaacgatatttttactacttcgatagttattggtacacttgc 23441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 1950326 - 1950222
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1950326 tttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 1950227  T
Q  231 taaaa 235  Q
    |||||    
T  1950226 taaaa 1950222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 20448099 - 20448189
Alignment:
Q  154 ttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20448099 ttattgctaaattgagattaacacagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 20533866 - 20533956
Alignment:
Q  154 ttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20533866 ttattgctaaattgagattaacacagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaagtatctatca 20533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 188
Target Start/End: Complemental strand, 29643227 - 29643044
Alignment:
Q  5 ttaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt---ccaactctatctttatattctgtttatttaatttt-atgcaaa 100  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||||||||    |||||| |  |||||| ||||||| ||||| |||| | ||| |    
T  29643227 ttaggggaacatcgatgattcgaaagacctaaactcatctctctcttattcttaaaaccaacttt--ctttattttctgtt-atttactttttaagcaca 29643131  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    | ||| |||||||||| ||||||||||||||||||||||| || | | |||| |||||||||||||||||||||||||||||||||||    
T  29643130 c-aaacctactgcctcggacactaaaataatttacacatcttagaaaataactttattgctaaattgagattaacacagtcctcgtgg 29643044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 34732370 - 34732190
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||  ||| ||||||||||| |||||||||| |||||| ||||  |||||||  |||||||||| ||||  |||||||||||||| |||    
T  34732370 ccaattaggggaactcagaggattcgaaagaactgatctcatatctctccttatcttttccaaaactatctttattttcttcttatttaattttattcaa 34732271  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
     | ||||||| ||  ||   |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  34732270 tc-aaaactagtgtttcgagcactaaaataatttacacatcctatatattagccttattgttaaattgagattaacacagtc 34732190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 6070963 - 6070724
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| ||| |  ||||| ||||  ||||||| || ||||||| |||||||||| |||||    
T  6070963 ccaattaggggaacatcgatgattcgaaaaacctgatctcatctcgctccttgtcttttccaaaactatctt-attttctgtt-atttaatttttatgca 6070866  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    | | ||| | | |  || ||| || ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||| |||| ||||||||||| ||    
T  6070865 atc-aaatcaaat--ct-agaaac-aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacaatccttgtgggaacgatgtt 6070771  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||| ||||||||||   |||| |||||||||||||||||| |||||    
T  6070770 tttattacttcgatacgttttattacacttgctaaaatatctatcag 6070724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 45941663 - 45941779
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||  | |||||    
T  45941663 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacatttttag 45941762  T
Q  222 tacacttgctaaaatat 238  Q
    |||||||||||||||||    
T  45941763 tacacttgctaaaatat 45941779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 33898567 - 33898659
Alignment:
Q  124 aaaataatttacacatcctaaatattaacctt-attgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagt 215  Q
    |||||||||||||||||||||||| ||| ||| | ||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  33898567 aaaataatttacacatcctaaataataaactttactgccaagttgaggttaacacagtccttgtgggaacgatatttttactacttcgatagt 33898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 2405756 - 2405870
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  2405756 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttta 2405855  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  2405856 gtacacttgctaaaa 2405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 21111035 - 21110971
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  21111035 aaaataatttatacatcctaaatatttactttattgctaaattgagagtaacacagtcctcgtgg 21110971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 41058179 - 41058115
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  41058179 aaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 41058115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 42022875 - 42022939
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  42022875 aaaataatttatacatcctaaatatttactttattgttaaattgagattaacacagtcctcgtgg 42022939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45941530 - 45941577
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45941530 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 45941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 188
Target Start/End: Complemental strand, 50196858 - 50196771
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaac-acagtcctcgtgg 188  Q
    |||| ||| ||||||||||||| ||| ||||||||||||||| |||||||| |||||||||| ||||||||||| || ||||||||||    
T  50196858 caaacctattgcctcagacacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacaacggtcctcgtgg 50196771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 673080 - 673023
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  673080 ccaattagggaaacatagatgattcgaaatacatgatctcatctctctcttattcttt 673023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 21018475 - 21018430
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21018475 aattaggggaacatagatgattcgaaagacctgatctcatctctct 21018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 49853015 - 49852955
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 184  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||    
T  49853015 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctc 49852955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21107301 - 21107254
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21107301 ccaattaggtgaacatagatgattcgaaagacctgatctcatctctct 21107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21111168 - 21111121
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21111168 ccaattaggagaacatagatgattcgaaagacctgatctcatctctct 21111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21114508 - 21114461
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21114508 ccaattaggagaacatagatgattcgaaagacctgatctcatctctct 21114461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 30938505 - 30938415
Alignment:
Q  69 ctttatattctgtttatttaa-ttttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattg 159  Q
    |||||||||| |||||||||| ||||||||| || ||| |||||||||| | || ||||||||||||||||||||| ||| |||||||||||    
T  30938505 ctttatattccgtttatttaacttttatgcacac-aaacctactgcctcgggcagtaaaataatttacacatcctagatagtaaccttattg 30938415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 905514 - 905463
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacactt 228  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||    
T  905514 cagtccttgtgggaacgatatttttactacttcgatagtatttgatacactt 905463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2405623 - 2405670
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||    
T  2405623 ccaattaggaaaacatagatgattcgaaagacctgatctcatctctct 2405670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 27354766 - 27354719
Alignment:
Q  183 tcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||    
T  27354766 tcgtgggaacgatatttttactacttcgatagtatttggtgcacttgc 27354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 905695 - 905638
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||| ||||||||||||||||||||||  | ||||||||||| |||||||||    
T  905695 ccaattagggaaacatagatgattcgaaagaccaaaactcatctctcttttattcttt 905638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1950465 - 1950420
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 46  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    
T  1950465 ccaattaggggaacatagatgattcgaaagacctagtctcatctct 1950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 21018344 - 21018280
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | || ||||||||| || |||||| ||||||||| ||||||||||||||||||    
T  21018344 aaaataatttatatattctaaatatttactttattgttaaattgaggttaacacagtcctcgtgg 21018280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 34065151 - 34064994
Alignment:
Q  21 gattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaat-tttatgcaaaccaaaactactgcctcag 118  Q
    ||||||||||||||  |||||||||||||  |||  |||||||  | |||||||| || ||| |||||| | ||||||||   |||| ||||||||||      
T  34065151 gattcgaaagacctagtctcatctctctccatatcttttccaaa-caatctttattttttgtctatttactgtttatgcagcacaaacctactgcctcga 34065053  T
Q  119 acactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacaca 178  Q
     |||| | | |||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  34065052 gcacttataaaatttacacatcctaaatattaactttattgct-agttgagattaacaca 34064994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41058312 - 41058265
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  41058312 ccaattagaggaacatagatgattcgaaagacctaatctcttctctct 41058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13430967 - 13430918
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    ||||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  13430967 ccaattaggggaactcagaggattcgaaagccctgatctcatctctctct 13430918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 27355232 - 27355173
Alignment:
Q  84 atttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatccta 143  Q
    ||||| ||||||||| | |||| |||||||||| | |||||||||||||||| |||||||    
T  27355232 atttacttttatgcacaacaaacctactgcctcgggcactaaaataatttacgcatccta 27355173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 17902633 - 17902566
Alignment:
Q  163 aattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatttagtacacttgc 230  Q
    |||||| ||||| |||||||| |||| |||||||||| ||||||||||||||||  || ||||||||||    
T  17902633 aattgaaattaatacagtccttgtgg-aacgatatttattactacttcgatagttattggtacacttgc 17902566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27354954 - 27354898
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||| |||||| || |||| ||||||||| | ||||||||||| ||||||||    
T  27354954 ccaattaggagaacatcgaggatttgaaagacctaaactcatctctcttttattctt 27354898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 98)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5673007 - 5673251
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5673007 ccaattaggggaacatagatgattcgaaagacctgatcgcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 5673106  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5673107 ccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 5673206  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||    
T  5673207 tactacttcgataatatttagtacacttgctaaaatatctatcag 5673251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 5670689 - 5670915
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5670689 ccaattaggggaacatagatgattcgaaagacctgatcgcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 5670788  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5670789 ccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 5670888  T
Q  201 tactacttcgatagtatttagtacact 227  Q
    ||||||||||||| |||||||||||||    
T  5670889 tactacttcgataatatttagtacact 5670915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34017791 - 34017550
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  34017791 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaa-ctatctttatattctgtt-atttaattttatgcaaa 34017694  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  34017693 ccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtgctcgcgggaacgatatttt 34017594  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  34017593 tactacttcgatagtatttaatacacttgctaaaatatctatca 34017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 40616818 - 40616579
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40616818 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 40616719  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40616718 ccaaaactactgcctagggcaactaaaagaaatttacacatcctaaatatcaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 40616619  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  40616618 tttactacttcgatagtatttggtacacttgccaaaatat 40616579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 48637617 - 48637853
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  48637617 ccaattagggaaacatagatgattcgaaagacctgatctcatctctctcttattctctccaactctatctttacattctgtttatttaattttatgcaaa 48637716  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48637717 ccaaaactactgcctagggcaactaaaagaaatttttacatcctaaatatttaccttattgctaaattgggattaacacagtcctcgtgggaacgatatt 48637816  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  48637817 tttactacttcgatagtatttagtacacttgctaaaa 48637853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 52530945 - 52530699
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  52530945 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgc-aa 52530847  T
Q  101 ccaaaactactgcctcag--acactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
     ||||||||||||||  |  | |||||||  |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52530846 tcaaaactactgcctagggcaaactaaaagaaatttacacatcttagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatat 52530747  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  52530746 ttttactacttcgatagtatttggtacgcttgctaaaatatctatcag 52530699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 27014375 - 27014617
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  27014375 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct--tattcttttccaaaactatctttatattttgtttatttaattttatgcaa 27014472  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  27014473 accaaaactactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatattt 27014572  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  27014573 ttactacttcgatggtatttagtgcacttgctaaaaaatctatca 27014617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24150784 - 24151020
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24150784 ccaattaggggaacacagatgattcgaaagacctgatctcatctctctctcattctttccaactctatctttacattctatttatttaattttatgcaaa 24150883  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  24150884 ccaaaactactgcctagggcaactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacaatatt 24150983  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  24150984 tttactacttcgatagtatttggtacacttgccaaaa 24151020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 15432190 - 15432436
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||| |||||||||||  ||||||||||||  |||||  ||||||    |||||||| ||||||||||||||||||||||||    
T  15432190 ccaattaggggaacatcgatgactcgaaagacctagtctcatctctcttattatt--ttccaaacaaatctttattttctgtttatttaattttatgcaa 15432287  T
Q  100 ac----caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 195  Q
     |    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15432288 tcaaatcaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 15432387  T
Q  196 atttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||| ||||||||| ||||| ||||||||||||||| ||| ||||    
T  15432388 atttttacaacttcgataatattttgtacacttgctaaaaaatctatca 15432436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34319927 - 34319684
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  34319927 ccaattaagggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 34319830  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    | | |||||||||| ||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34319829 atc-aaaactactgtctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 34319731  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  34319730 ttttactacttcgatagtatttagtacacttgctaaaatatctatca 34319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 5706504 - 5706717
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| ||||||||||||||||||||||||    
T  5706504 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 5706603  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    ||||||||||||||||||| || ||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5706604 accaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 5706703  T
Q  199 tttactacttcgat 212  Q
    ||||||||||||||    
T  5706704 tttactacttcgat 5706717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 44808965 - 44808731
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| |||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  44808965 ccaattaggagaacatcgatgattcgaaagatctgatctcatctttctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 44808868  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    | | |||||||||||||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44808867 atc-aaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 44808769  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44808768 ttttactacttcgatagtatttagtacacttgctaaaa 44808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 29324944 - 29325172
Alignment:
Q  9 gggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaaccaaaac 107  Q
    |||||||| |||||||||||||||||||||| ||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| ||||||||| | |||||    
T  29324944 gggaacatcgatgattcgaaagacctgatctgatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaatc-aaaac 29325040  T
Q  108 tactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactac 206  Q
    ||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29325041 tactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactac 29325140  T
Q  207 ttcgatagtatttagtacacttgctaaaatat 238  Q
    ||||||||||||| |||||||||| |||||||    
T  29325141 ttcgatagtatttggtacacttgccaaaatat 29325172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 19859473 - 19859332
Alignment:
Q  42 tctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatc 140  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19859473 tctctctcttattcttttccaaaactatttttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatc 19859374  T
Q  141 ctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
    ||| ||||||||||||||||||||||||||||||| ||||||    
T  19859373 ctagatattaaccttattgctaaattgagattaactcagtcc 19859332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 53094620 - 53094802
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaa-gacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgca 98  Q
    |||||||||||||| |||| |||| |||| |||||||||||||||||||| ||||  |||||||   ||| ||||| |||||||||||||||||||||||    
T  53094620 ccaattaggggaacttagaggatttgaaaagacctgatctcatctctctccttatcttttccaaaaatatatttattttctgtttatttaattttatgca 53094719  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
    |   |||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  53094720 ata-aaaactactgtctcagacactaaaataatttacacatcctatatattaaccatattgctaaattgagattaacacagtcc 53094802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 40902960 - 40902846
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40902960 aaaataatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 40902861  T
Q  224 cacttgctaaaatat 238  Q
    |||||||||||||||    
T  40902860 cacttgctaaaatat 40902846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12238377 - 12238615
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||   |||  |||||||  |||||||||| || |||| ||||||||||||||||     
T  12238377 ccaattaggggaacattgatgactcgaaagacctagtctcatctctcatatatattttccaaaactatctttattttatgtt-atttaattttatgcaat 12238475  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    | ||| | | |  || | | || ||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  12238476 c-aaatcaaat--ct-ataaac-aaaataatttatacatcctaaatatttactttattgctaaattgagattaatacagtcatcgtgggaacgatatttt 12238570  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  12238571 tactacttcgatggtatttagtacacttgctaaaatatctatcag 12238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 182
Target Start/End: Complemental strand, 19864342 - 19864225
Alignment:
Q  65 ctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaa 164  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  19864342 ctatttttatattctgtttatttaattttatgcaaaccaaaactactgcctctggcactaaaataatttacacatcctagatattaaccttattgctaaa 19864243  T
Q  165 ttgagattaacacagtcc 182  Q
    ||||||||||||| ||||    
T  19864242 ttgagattaacacggtcc 19864225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 33927084 - 33927320
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || || |||| ||||| |||| |||||    
T  33927084 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttatgtt-atttactttttatgca 33927181  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
     |||||  |||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||       
T  33927182 caccaac-ctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaact 33927280  T
Q  195 tatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||||| |||||||||||||||||||    
T  33927281 taattttattacttcgatagt-tttagtacacttgctaaaa 33927320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 56195639 - 56195824
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  56195639 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 56195736  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  56195737 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacaatcctcgtg 56195824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 18911754 - 18911861
Alignment:
Q  137 catcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18911754 catcctaaatattttttttattgctaaattgagattaacacagtcctcgtggaaacgatatttttactacttcgatagtatttagtacacttgctaaaat 18911853  T
Q  237 atccatca 244  Q
    ||| ||||    
T  18911854 atctatca 18911861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 38283366 - 38283255
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  38283366 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttggta 38283267  T
Q  224 cacttgctaaaa 235  Q
    ||||||| ||||    
T  38283266 cacttgccaaaa 38283255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39501760 - 39501936
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttattta-attttatgcaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||||||  ||||||||||    
T  39501760 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctcattctttccaactctatc-ttattttct-attatttactttttatgcaa 39501857  T
Q  100 accaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaaca 176  Q
    ||||||| ||||||||  | | |||||||  |||||| | ||||||| |||| |||||||||||||||||||| |||||    
T  39501858 accaaaattactgcctagggcaactaaaagaaatttatagatcctaattatttaccttattgctaaattgagaataaca 39501936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 27676932 - 27676812
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||||||    
T  27676932 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagttttcgtaggaacgatatttttactacttcgataatatttagta 27676833  T
Q  224 cacttgctaaaatatccatca 244  Q
    ||||||||| |||||| ||||    
T  27676832 cacttgctagaatatctatca 27676812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39498421 - 39498597
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttattta-attttatgcaa 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||||||  ||||||||||    
T  39498421 ccaattaggggaacttagatgattcgaaagacctgatctcatctctctctcattctttccaactctatc-ttattttct-attatttactttttatgcaa 39498518  T
Q  100 accaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaaca 176  Q
    ||||||| ||||||||  | | |||||||  |||||| | ||||||| |||| |||||||||||||||||||| |||||    
T  39498519 accaaaattactgcctagggcaactaaaagaaatttatagatcctaattatttaccttattgctaaattgagaataaca 39498597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 15405090 - 15404854
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgcaa 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||| ||||  |||||||   ||| |  ||||||| |||| |||||     
T  15405090 caattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt---atttttgttatttactttttatgcac 15404994  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---t 195  Q
    |||||  ||||||||||   |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||  ||||   |    
T  15404993 accaac-ctactgcctcgtgcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcgtcgtggatacgaactt 15404895  T
Q  196 atttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    | ||||| |||||||||   |||||||||||||||||||||    
T  15404894 aattttattacttcgatgcatatttagtacacttgctaaaa 15404854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 56198965 - 56199203
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||| |  ||||| ||||  ||||||| || |||| || ||||| |||| |||||    
T  56198965 ccaattaggggaacatcgatgattcgaaagacctgatttcatctctctccttgtcttttccaaaactatctt-attttctatt-atttactttttatgca 56199062  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
     |||||  |||||| ||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||       
T  56199063 caccaac-ctactgtctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaact 56199161  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||   | |||||||||||||||||||    
T  56199162 taattttattacttcgatgcatttttagtacacttgctaaaa 56199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 10386151 - 10386285
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||||| ||| | | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  10386151 caaacctactgcctcagaaacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 10386250  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  10386251 ttattacttcgatagt-tttagtacacttgctaaaa 10386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 15445242 - 15445124
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtattta 220  Q
    ||||||||||  |||| ||||||||| || |||||||||||||||||||||  ||||||||||||  ||||   ||||||||||||||||||||||||||    
T  15445242 aaaataatttgtacattctaaatatttactttattgctaaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtattta 15445143  T
Q  221 gtacacttgctaaaatatc 239  Q
    |||||||||||||||||||    
T  15445142 gtacacttgctaaaatatc 15445124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3797818 - 3797587
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||  |||| || || ||||||| ||||||||||||||||     
T  3797818 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-atcttttccaaaactatgtt-attttctgtt-atttaattttatgcaat 3797722  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tat 197  Q
    | ||| | |      || |||   |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||   ||     
T  3797721 c-aaatcaaaatatacaaaca---aaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttaa 3797626  T
Q  198 ttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    ||||| |||||||||   | |||||||||||||||||||    
T  3797625 ttttattacttcgatgcatttttagtacacttgctaaaa 3797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 17670519 - 17670662
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||  ||||  |  ||    
T  17670519 caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcgtggatacgaacttatt 17670618  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  17670619 ttattacttcgatagt-tttagtacacttgctaaaatatctatca 17670662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 15812146 - 15811959
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||| |  ||||| ||||  ||||||| || || |||| ||| | |||| |||||    
T  15812146 ccaattaggggaacatcgatgtatcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttttgtt-attaactttttatgca 15812049  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
     || ||  |||||||||||| |||||||| || ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  15812048 cactaac-ctactgcctcaggcactaaaacaaatttacacttcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 15811959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 10248039 - 10248170
Alignment:
Q  108 tactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttacta 205  Q
    |||||||||| ||||| | | ||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||  ||||  |  ||||| ||    
T  10248039 tactgcctcatacacttataaaatttacacatcctagatattaactttattgctagtttgagattaacacagtcctcgtggatacgaacttattttatta 10248138  T
Q  206 cttcgatagtatttagtacacttgctaaaatat 238  Q
    |||||||||| ||||||||||||||||||||||    
T  10248139 cttcgatagt-tttagtacacttgctaaaatat 10248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 15429733 - 15429618
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtattta 220  Q
    ||||||||||| |||||||||||||| || |||||| ||||||||||||||  ||||||||||||  ||||   ||||||||||||||||||||||||||    
T  15429733 aaaataatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtattta 15429634  T
Q  221 gtacacttgctaaaat 236  Q
     ||| |||||||||||    
T  15429633 atacgcttgctaaaat 15429618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 15436347 - 15436232
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtattta 220  Q
    ||||||||||| |||||||||||||| || |||||| ||||||||||||||  ||||||||||||  ||||   ||||||||||||||||||||||||||    
T  15436347 aaaataatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtattta 15436248  T
Q  221 gtacacttgctaaaat 236  Q
     ||| |||||||||||    
T  15436247 atacgcttgctaaaat 15436232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 11702482 - 11702352
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||  ||||  |  ||||| |    
T  11702482 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttattttatt 11702383  T
Q  205 acttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| ||||||||||||||||||||    
T  11702382 acttcgatagt-tttagtacacttgctaaaat 11702352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 12786357 - 12786480
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  12786357 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttta 12786456  T
Q  221 gtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||| ||||    
T  12786457 gtacacttgctaaaatatctatca 12786480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 18859985 - 18860119
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  18859985 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 18860084  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||| | |||||||||||||||||||    
T  18860085 ttattacttcgata-tttttagtacacttgctaaaa 18860119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 35510103 - 35510349
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||   ||  | |||||||| ||||||    ||| |||||||||||    
T  35510103 ccaattaggggaatatagatgattcgaaagacctaaactcatctctctcttaatctta--aaaccaatctttattttctgtca--ttacttttatgcaaa 35510198  T
Q  101 ccaa---aactactgcctcagacact-aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga-- 194  Q
    | ||   | | |||||||  | ||   ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||      
T  35510199 caaaccaatcaactgcctagggcaaacaaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaat 35510298  T
Q  195 tatttttactacttcgata-gtatttagtacacttgctaaaatatccatca 244  Q
    |  ||||| ||||| ||||  | ||||||||||||||||||||||| ||||    
T  35510299 ttattttattacttggatacatttttagtacacttgctaaaatatctatca 35510349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 48415402 - 48415288
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat---ttttactacttcgata-gtattt 219  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| ||| |||||||||   ||||| |||||||||| || |||    
T  48415402 aaaataatttatacatcctaaatatttac-ttatttctaaattgagattaacacagtccttgtgagaacgatattttttttattacttcgatatgttttt 48415304  T
Q  220 agtacacttgctaaaa 235  Q
    ||||||||||||||||    
T  48415303 agtacacttgctaaaa 48415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 5677402 - 5677181
Alignment:
Q  18 gatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctca 117  Q
    ||||||||||| |||||||||||||||||| | |||  |||| ||  | | |||||||||| ||||||||| ||||||||| || |||||||||    |     
T  5677402 gatgattcgaatgacctgatctcatctctc-catatattttctaaa-caacctttatattccgtttatttatttttatgcacac-aaaactact----cg 5677310  T
Q  118 gacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacg---atatttttactacttcgatag 214  Q
    | |||||||||||||||  |||| || |||||||||||||||||||||||||||| ||||| |||||||||  |||   ||||||||| |||||||||||    
T  5677309 ggcactaaaataatttattcatcatagatattaaccttattgctaaattgagatt-acacaatcctcgtggatacgaacatatttttattacttcgatag 5677211  T
Q  215 tatttagtacacttgctaaaatatccatcagt 246  Q
     | ||| ||| |||||| ||||||||||||||    
T  5677210 -aattactactcttgct-aaatatccatcagt 5677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 170
Target Start/End: Complemental strand, 22172318 - 22172215
Alignment:
Q  67 atctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaatt 166  Q
    |||||||| ||| || ||||||  |||||||| || |||  ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  22172318 atctttattttccgtctatttacatttatgcacacaaaacatactgcctcgggcactaaaataatttacacatcctacatattaaccttattgctaaatt 22172219  T
Q  167 gaga 170  Q
    ||||    
T  22172218 gaga 22172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 3720595 - 3720659
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  3720595 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 3720659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 19820949 - 19821063
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  19820949 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgatacattttta 19821048  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  19821049 gtacacttgctaaaa 19821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 40795247 - 40795361
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||  || |  || ||||| ||||||||||  | ||||    
T  40795247 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcttcgtggatacaaactaattttattacttcgatacattttta 40795346  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  40795347 gtacacttgctaaaa 40795361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 26060744 - 26060852
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgata-gtatttagtacac 226  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||| |||||||||||  ||||   |||||||| ||||||||||  | ||||||||||    
T  26060744 tttatacattctaaatattaaccttattgctaacttgagattaacatagtcctcgtggatacgaacttatttttattacttcgatacatttttagtacac 26060843  T
Q  227 ttgctaaaa 235  Q
    |||||||||    
T  26060844 ttgctaaaa 26060852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18673092 - 18673035
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  18673092 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 18673035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 33408324 - 33408154
Alignment:
Q  4 attaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaaacc 102  Q
    ||||||||||| |||| |||||||||||||| | |||||| |||||  |||  |||||||  |||||||||| || ||||||||||||||||||||| |     
T  33408324 attaggggaacttagaggattcgaaagacctaaactcatcactctccatatattttccaaaactatctttattttatgtttatttaattttatgcaatc- 33408226  T
Q  103 aaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacaca 178  Q
    ||| | | | |  || |||   |||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  33408225 aaatcaaat-ctacaaaca---aaataatttatacatcctaaatatttactttattgctaaattgagattaacaca 33408154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11195787 - 11195843
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  11195787 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 11195843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 19827656 - 19827720
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  19827656 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtgg 19827720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15445375 - 15445328
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15445375 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 15445328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19827527 - 19827574
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19827527 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 19827574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 24044016 - 24043957
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcct 183  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||    
T  24044016 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcct 24043957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38283499 - 38283452
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283499 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 38283452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 5681539 - 5681725
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgca-- 98  Q
    ||||||| |||||||| |||||||||||||||||  ||||||||||| |||||  |||||||  |||||||||| || || |||||||||||||||||      
T  5681539 ccaattaagggaacatcgatgattcgaaagacctagtctcatctctc-cttatcttttccaaaactatctttattttatg-ttatttaattttatgcaat 5681636  T
Q  99 --aaccaaaactactgcctcagac-actaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
      || |||| ||||||||   | | |  ||||||||||| |||||||||||||| || |||||||    |||||||||| |||||||||||||    
T  5681637 ccaatcaaatctactgcccagggcaaacaaaataatttatacatcctaaatatttactttattgc----ttgagattaatacagtcctcgtgg 5681725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19859532 - 19859483
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19859532 ccaattaggggatcatagatgattcgaaagacctgatctcatctctctct 19859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19864527 - 19864478
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19864527 ccaattaggggatcatagatgattcgaaagacctgatctcatctctctct 19864478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21419900 - 21419956
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  21419900 ccaattaggggaacatcgatgattcgaaagacctaaactcatctctctcttattctt 21419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 25962351 - 25962407
Alignment:
Q  180 tcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25962351 tccttgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 25962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 52006408 - 52006344
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  52006408 aaaataatttatatatcctaaatatttactttatcgctaaattgagattaacacagtcctcgtgg 52006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12783016 - 12783063
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  12783016 ccaattagaggaacatagatgattcgaaagacctgatctcatctctct 12783063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15429866 - 15429819
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15429866 ccaattaggggaacatagatgattcaaaagacctgatctcatctctct 15429819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15436480 - 15436433
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15436480 ccaattaggggaacatagatgattcaaaagacctgatctcatctctct 15436433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19820839 - 19820886
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19820839 ccaattaggggaacaaagatgattcgaaagacctgatctcatctctct 19820886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 30392847 - 30392914
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  30392847 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacaattgc 30392914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40903093 - 40903046
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40903093 ccaattaggggaacatagatgattctaaagacctgatctcatctctct 40903046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 52006541 - 52006494
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52006541 ccaattaggggaacatagatgattcgaaagacctggtctcatctctct 52006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 11195948 - 11196014
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| || ||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  11195948 attgagattaaaaccagtccttatgggaacgatatttttactacttcgatagtatttggtacacttg 11196014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 53009402 - 53009336
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  53009402 attgagattaaaaccagtccttgtgggaacgatatttttactaattcgatagtatttggtacacttg 53009336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 37103088 - 37103031
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  37103088 tttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgg 37103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 18672903 - 18672855
Alignment:
Q  188 ggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18672903 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 18672855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25962170 - 25962226
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  25962170 ccaattaggagaacatcgatgattcgaaagacctaaactcatctctctcttattctt 25962226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30392680 - 30392736
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||||    
T  30392680 ccaattaggggaacatatatgattggaaagacctaaactcatctctctcttattctt 30392736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40493377 - 40493321
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||    
T  40493377 ccaattaggggaacatcgatgattcgaaagacctaaactcatatctctcttattctt 40493321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 46955488 - 46955432
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||    
T  46955488 ccaattaggggaacatcgatgattcaaaagacctaatctcatctctcttttattctt 46955432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40795114 - 40795161
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  40795114 ccaattagggaaacatagatgattcgaaagacctgatcttatctctct 40795161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44164894 - 44164941
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  44164894 ccaattaggggaacatagatgattcgaaagacttgatctcatgtctct 44164941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 53009566 - 53009512
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  53009566 aattaggggaacatagacgattcaaaagacctaaactcatctctctcttattctt 53009512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8871775 - 8871722
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt 54  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  8871775 ccaattaagggaacttagatgatttgaaagacctgatctcatctctctcatatt 8871722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18911610 - 18911691
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtt 82  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||   |||  |||||||  |||||||||| |||||||    
T  18911610 ccaattaggggaacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtt 18911691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 21420064 - 21420137
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || | |||| |||| ||||||||||||||||||||||||||||||  ||||||||| |||||    
T  21420064 attgagattaaaaccaatccttgtggaaacgatatttttactacttcgatagtatttgatacacttgccaaaat 21420137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 40493213 - 40493140
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| | ||||| | || |||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  40493213 attgagattaaaatcagtcattgtaggaacgatatttttactacttcaatagtatttggtacacttgccaaaat 40493140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8877505 - 8877457
Alignment:
Q  6 taggggaacatagatgattcgaaagacctgatctcatctctctcttatt 54  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  8877505 taggggaacttagatgatttgaaagacctgatctcatctctctcatatt 8877457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29544884 - 29544828
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||| ||||||| ||||||||||||||||| | ||||| ||||||||||||||    
T  29544884 ccaattagaggaacatcgatgattcgaaagacctaaactcatatctctcttattctt 29544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 46955323 - 46955252
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| ||||    
T  46955323 attgagattaaaatcagtccttgtgggaacgatatttttactacttcgatact-tttggtacacttgccaaaa 46955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 49270925 - 49270977
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaaca 176  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||||||||||    
T  49270925 aaaataatttatacatcataaatattcactttattgctaaattgagattaaca 49270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24044151 - 24044104
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  24044151 ccaattaggggaacatagataatttcaaagacctgatctcatctctct 24044104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 37739667 - 37739535
Alignment:
Q  107 ctactgcctcagacactaaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tattttt 201  Q
    |||||||||||| |||||||||||  |||||||||||||  |  || |  ||||| | | ||||||||||||| |||||||||| |||||   || || |    
T  37739667 ctactgcctcaggcactaaaataaactttacacatcctatttcatatcgctattgtttacttgagattaacacggtcctcgtggaaacgaacttaattgt 37739568  T
Q  202 actacttcgatagtatttagtacacttgctaaa 234  Q
    | |||||||||||| |||| |||||||||||||    
T  37739567 attacttcgatagtttttaatacacttgctaaa 37739535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 29544703 - 29544650
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||  ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  29544703 cagtccttatgggaacaatatttttattacttcgatagtatttggtacacttgc 29544650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 11649308 - 11649276
Alignment:
Q  152 ccttattgctaaattgagattaacacagtcctc 184  Q
    |||||||||||||||||||||||||||||||||    
T  11649308 ccttattgctaaattgagattaacacagtcctc 11649276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15164305 - 15164353
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    |||||||| |||| || |||||||||||||||| |||||||||||||||    
T  15164305 ccaattagaggaatatcgatgattcgaaagacccgatctcatctctctc 15164353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 44165027 - 44165087
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 184  Q
    ||||||||||| ||||| |||||||| || ||||| |||||||||||||||  ||||||||    
T  44165027 aaaataatttatacatcataaatatttactttattactaaattgagattaaatcagtcctc 44165087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 52005641 - 52005589
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaaca 176  Q
    ||||||||||| ||||| |||||||| || ||||||||||||||| |||||||    
T  52005641 aaaataatttatacatcttaaatatttactttattgctaaattgaaattaaca 52005589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27677065 - 27677018
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  27677065 ccaattagaggaacataaatgattcgatagaccttatctcatctctct 27677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49270791 - 49270837
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  49270791 ccaattaggagaatatagatgattcgaaaga-ctgatctcatctctct 49270837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48415539 - 48415488
Alignment:
Q  1 ccaattaggggaacata----gatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||    ||| |||||||||||||||||||||||||||    
T  48415539 ccaattaggggaacatatatagataattcgaaagacctgatctcatctctct 48415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37103226 - 37103181
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 46  Q
    |||||||||| ||||||||||||||||||||| |  ||||||||||    
T  37103226 ccaattagggaaacatagatgattcgaaagacttagtctcatctct 37103181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 8871545 - 8871483
Alignment:
Q  171 ttaacacagtcctcgtgggaacgatatttt---tactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||||||||||  ||||| ||||   ||||||||||||||| ||| ||||||||||    
T  8871545 ttaacacagtcctcgtggagacgatcttttctttactacttcgatagtttttggtacacttgc 8871483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 122)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2873761 - 2874006
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct--tattctttccaactctatctttatattctgtttatttaattttatgca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  2873761 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctcttattctttccaactctatctttatattctgtt-atttaattttatgca 2873859  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  2873860 aaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaacattattgctaaattaagattaacacagtcctcgtgggaacgatatt 2873959  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2873960 tttactacttcgatagtatttagtacacttgctaaaatatctatcag 2874006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30690933 - 30691168
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  30690933 ccaattagggaaacatagatgattcgaaagacctgatcttatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 30691032  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30691033 ccaaaactactgtctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 30691132  T
Q  201 tactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||||||||||||||| |||||||||||||    
T  30691133 tactacttcgatagtatttagtgcacttgctaaaat 30691168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 54723939 - 54724177
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  54723939 ccaattatgggaacatagatgattcggaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 54724038  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  54724039 ccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctaaattgaaattaacacggtcctcgtgggaacgatatttt 54724138  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatc 239  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  54724139 tactacttcgataatatttagtacacttgctaaaatatc 54724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 539024 - 539267
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  539024 ccaattagggaaacatatatgattcgaaagacctaatctcatctctctcttatactttccaaaactatctttatattctgtttatttaattttatgcaaa 539123  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  539124 ccaaaactactgcctcgggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 539223  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  539224 tactacttcgatagtatttagtatacttgctaaaatatctatca 539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 11190724 - 11190967
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11190724 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 11190823  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    ||||||| |||||||| | || |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  11190824 ccaaaacaactgcctcgggcattaaaataatttacacatcctaagtattaaccttattactaaattgagattaatacagttctcgtgggaacgatatttt 11190923  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||| |||||||||| ||||    
T  11190924 tactacttcgatagtatttagtacacttactaaaatatctatca 11190967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6922717 - 6922952
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6922717 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttttcaactctatctttatattctgtttatttaattttatgcaaa 6922816  T
Q  101 ccaaaactactgcctca-gacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||| ||||| |  |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  6922817 ccaaaactactacctcacgcaaacaaaataatttacacatcctaaatattaactttattgctaaattgagattaacacagtcttcgtgggaacgatattt 6922916  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||| |||||||||||    
T  6922917 ttactacttcgatagtatttagtatacttgctaaaa 6922952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 53816025 - 53816261
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53816025 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttatgcaaa 53816124  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||| | | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  53816125 ccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatt 53816224  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||| |||||||||||||||||||||||||||    
T  53816225 tttactactacgatagtatttagtacacttgctaaaa 53816261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7486768 - 7487003
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  7486768 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctg-ttatttaattttatgcaac 7486866  T
Q  101 ccaaaactactgcctcagacact--aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | || |  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7486867 ccaaaactactgcctagggcaattaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtccttgtgggaacgatatt 7486966  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7486967 tttattacttcgatagtatttagtacacttgctaaaa 7487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24125696 - 24125931
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24125696 ccaattagggaaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctg-ttatttaattttatgcaaa 24125794  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  24125795 ccaaaactactgcctagggcaactaaaagaaatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatt 24125894  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  24125895 tttactacttcgatagtatttagtacacttgctaaaa 24125931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 23298612 - 23298366
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23298612 ccaattaagggaacttagatgattcgaaagacctaatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 23298513  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23298512 ccaaaactactgcctagggcaactaaaagaaatttacacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 23298413  T
Q  199 tttactacttcgata-gtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||  | ||||||||||||||||||||||| ||||    
T  23298412 tttactacttcgatacatttttagtacacttgctaaaatatctatca 23298366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28266114 - 28266332
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28266114 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 28266213  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  28266214 ccaaaactactgcctagggcaactaaaagaaatttacacatcctaaatatttagcttattgctaaattgagattaacacagtcctcgtgggaacgatatt 28266313  T
Q  199 tttactacttcgatagtat 217  Q
    |||||||||||||||||||    
T  28266314 tttactacttcgatagtat 28266332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24128973 - 24129208
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24128973 ccaattagggaaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctg-ttatttaattttatgcaaa 24129071  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  24129072 ccaaaactactgcctagggcaactaaaagaaatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgagggaacgatatt 24129171  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  24129172 tttactacttcgatagtatttagtacacttgctaaaa 24129208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 6434775 - 6434526
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6434775 ccaattaggggaacatagatgattcgaaagacctaatctcatctctctcttattctttcaaactctatctttatattctgtttatttaattttatgcaaa 6434676  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6434675 ccaaaactactgcctagggcaactaaaagaaatttacacatcataaatattaaccttattgttaaattgagattaacacagtcctcgtgggaacgatatt 6434576  T
Q  199 t---ttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |   ||| ||||||||||||||||||| |||||||||||| ||| |||||    
T  6434575 tttattattacttcgatagtatttagtgcacttgctaaaaaatctatcag 6434526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 78 - 244
Target Start/End: Complemental strand, 12541219 - 12541053
Alignment:
Q  78 ctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacac 177  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12541219 ctgtttatttaattttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacac 12541120  T
Q  178 agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  12541119 agtcctcatgggaacgatatttttactacttcaatagtatttagtacacttgctacaatatctatca 12541053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18641769 - 18641556
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| ||||||||||||||||||||||||    
T  18641769 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 18641670  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    ||||||||||||||||||| || ||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18641669 accaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 18641570  T
Q  199 tttactacttcgat 212  Q
    ||||||||||||||    
T  18641569 tttactacttcgat 18641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18644765 - 18644533
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| ||||||||||||||||||||||||    
T  18644765 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaattttatgcaa 18644666  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    ||||||||||||||||||| || ||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18644665 accaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 18644566  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||     |||||||| ||||||||||||    
T  18644565 tttactacttc----ttatttagtgcacttgctaaaa 18644533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 50461545 - 50461303
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  50461545 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 50461448  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || |||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50461447 tc-aaaactactgcctcgggcactaaaagaaatttacatatcatagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 50461349  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  50461348 tttactacttcgatagtatttggtacacttgccaaaatatctatca 50461303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 16184684 - 16184445
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatg--- 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||| || | |||||||| ||||||        
T  16184684 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctcctattcttttccaaaactatctttatttttt-tttatttacttttattgca 16184586  T
Q  97 --caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga 194  Q
      |||| |||| | |||||||||| ||  |||||| |||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||    
T  16184585 atcaaatcaaatcaactgcctcaggcatcaaaatattttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggaaacga 16184486  T
Q  195 tatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16184485 tatttttactacttcgatagtatttagtacacttgctaaaa 16184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 28327652 - 28327793
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28327652 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 28327751  T
Q  189 gaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  28327752 gaacgatatttttactacttcgatagttattggtacacttgc 28327793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 28330977 - 28331118
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28330977 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 28331076  T
Q  189 gaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  28331077 gaacgatatttttactacttcgatagttattggtacacttgc 28331118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 32287320 - 32287135
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct------tattcttt-ccaactctatctttatattctgtttatttaatttt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||      || ||||| ||||  |||||||||| ||||||||||||||||||    
T  32287320 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctctctcctaatcttttccaaaactatctttattttctgtttatttaatttt 32287221  T
Q  94 atgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagt 180  Q
    |||||| | ||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32287220 atgcaatc-aaaactattgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagt 32287135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 35412707 - 35412946
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||| ||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  ||||| |||| |||| |||||||||||||||||||    
T  35412707 ccaattagaggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatccttattttctatttatttaattttatgcaa 35412806  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
     | ||| | | | |  || |||   ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  35412807 tc-aaatcaaat-ctacaaaca---aaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatattt 35412901  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  35412902 ttactacttcgatagtatttagtacacttgctaaaatatctatca 35412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 8461484 - 8461257
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||||  |||||||||| ||||||||||||||||||||||||     
T  8461484 ccaattagggaaacatagatgattcgaaagacctaatctcatctctct-ttatcttttccaaaactatctttattttctgtttatttaattttatgcaat 8461386  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    | ||| | | | |  || |||   |||||||||| | |||||||||||| || ||||| ||||||||||||||||||| ||||| || ||||||||||||    
T  8461385 c-aaatcaaat-ctacaaaca---aaataatttataaatcctaaatatttactttatttctaaattgagattaacacattcctcatgtgaacgatatttt 8461291  T
Q  201 tactacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||||||||||||||||||||||||||||||    
T  8461290 tactacttcgatagtatttagtacacttgctaaa 8461257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 43927170 - 43927281
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43927170 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactactttgatagtatttagta 43927269  T
Q  224 cacttgctaaaa 235  Q
    ||||||||||||    
T  43927270 cacttgctaaaa 43927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 10106586 - 10106362
Alignment:
Q  12 aacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactact 111  Q
    |||||||||||||| ||||||||  |||||||||||   |||  |||||||  |||||||||| |||||||||||||||||||||||| | ||| | | |    
T  10106586 aacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtttatttaattttatgcaatc-aaatcaaat 10106488  T
Q  112 gcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagatt------aacacagtcctcgtgggaacgatatttttacta 205  Q
      || | | || ||||||||||| |||||||||||||| ||   |||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  10106487 --ct-ataaac-aaaataatttatacatcctaaatatttactaaattgctaaattgagattgagattaacacagtcctcgtgggaacgatatttttacta 10106392  T
Q  206 cttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||||||||    
T  10106391 cttcgatagtatttagtacacttgctaaaa 10106362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 2775815 - 2775921
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2775815 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagta 2775914  T
Q  224 cacttgc 230  Q
    |||||||    
T  2775915 cacttgc 2775921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 2779057 - 2779163
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2779057 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagta 2779156  T
Q  224 cacttgc 230  Q
    |||||||    
T  2779157 cacttgc 2779163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 3306057 - 3306200
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||    
T  3306057 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctagatattaactttattgctaggttgagattaacacagtcctcgtgg 3306156  T
Q  189 gaacgatatt--tttactacttcgatagtatttagtacacttgc 230  Q
      ||||  ||  |||| ||||||||||||  || ||||||||||    
T  3306157 atacgaacttaatttattacttcgatagttattggtacacttgc 3306200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 43809777 - 43809968
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattc-tttccaactctatctttatattctgtttatttaattttat---- 95  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||| || || ||||||| ||||||        
T  43809777 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctcctattcttttccaaaactatctttattttatg-ttatttacttttattgca 43809875  T
Q  96 -gcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
      |||| |||| |||||||||| | ||  |||||| |||| |||||||||||||| || ||||||||||||| | ||||||||||||| ||||    
T  43809876 atcaaatcaaatctactgcctcgggcatcaaaatattttatacatcctaaatatttactttattgctaaattaaaattaacacagtccccgtg 43809968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 28008066 - 28007879
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaac- 101  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| | |||||||| ||||||    ||| |||||||||| |     
T  28008066 aatttggggaacatagatgattcgaaagacctaatctcatctctctcttattctttagaac-caatctttattttctgtca--ttacttttatgcaatca 28007970  T
Q  102 ---caaaactactgcctcagacact-aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
       |||| ||||||||| || ||   ||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  28007969 aatcaaatctactgcctaaggcaaacaaaataatttatacatcctaaatatttactttattgctaaattgagattaacatagtcctcgtgg 28007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 47051697 - 47051880
Alignment:
Q  5 ttaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttattta-attttatgcaaacc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||  ||||| |||| ||||| |||||||  ||||||||| |||    
T  47051697 ttaggggaacatagatgattcgaaagacctgatctcatctctctcattgtcttttccaaaactatc-ttattttctg-ttatttactttttatgcacacc 47051794  T
Q  103 aaaactactgcctcagacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
     || |||||||||| | ||||||||  ||||||||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||    
T  47051795 -aacctactgcctcgggcactaaaagaaatttacacatgctagatattaatgttattgctaaattgagattaacatagtcctcgtgg 47051880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 18883432 - 18883576
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||   ||||  |  ||    
T  18883432 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgaatacgaacttatt 18883531  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||    
T  18883532 ttactactttgatagt-tttagtacacttgctaaaatatctatcag 18883576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 45896711 - 45896826
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata----tttttactacttcgatagtattt 219  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| ||||| ||||||    |||||| ||||||||||||||||    
T  45896711 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtggggacgatatttttttttattacttcgatagtattt 45896810  T
Q  220 agtacacttgctaaaa 235  Q
    |||| |||||||||||    
T  45896811 agtatacttgctaaaa 45896826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 10963614 - 10963761
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga------t 195  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||      |    
T  10963614 caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 10963713  T
Q  196 atttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||| |||||||||||| |||||||| |||||||||||||| ||||    
T  10963714 atttttattacttcgatagt-tttagtacgcttgctaaaatatctatca 10963761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 47055131 - 47055310
Alignment:
Q  9 gggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaaccaaaac 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || |||||||  ||   ||||||||| |||||  |    
T  47055131 gggaacatagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgttctttagtttttatgcacaccaac-c 47055228  T
Q  108 tactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||  | |||||||| || ||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||    
T  47055229 tactgccttgggcactaaaagaaatttacacatcctagatattaacgttatttctaaattgagattaacacaatcctcgtgg 47055310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 2784326 - 2784469
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | | ||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  2784326 caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 2784425  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  2784426 ttattacttcgatagt-tttagtacacttgctaaaatatctatca 2784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 10960107 - 10960254
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga------t 195  Q
    |||| ||||| |||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||      |    
T  10960107 caaacctactacctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 10960206  T
Q  196 atttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||| |||||||||||| |||||||| |||||||||||||| ||||    
T  10960207 atttttattacttcgatagt-tttagtacgcttgctaaaatatctatca 10960254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 25585007 - 25585120
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| |||| || |||||||||||||||| |||||||||||| |||||| |||||||||| || |||||    
T  25585007 aaaataatttatacatcctaaatatttactttatttctaagttaagattaacacagtccttgtgggaacgatattttttattacttcgatacgtttttag 25585106  T
Q  222 tacacttgctaaaa 235  Q
    ||||||||||||||    
T  25585107 tacacttgctaaaa 25585120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 49742783 - 49742670
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat-ttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| ||  ||||||||| ||||| |||||||||| || |||||    
T  49742783 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtaagaacgatattttttattacttcgatacgtttttag 49742684  T
Q  222 tacacttgctaaaa 235  Q
    ||||||||||||||    
T  49742683 tacacttgctaaaa 49742670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 4250606 - 4250739
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat-ttt 200  Q
    |||| ||||||| |||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |   || | |||    
T  4250606 caaacctactgcttcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggtacgaatttattt 4250705  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    || |||||||||||| |||||||||||||||||||    
T  4250706 tattacttcgatagt-tttagtacacttgctaaaa 4250739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22993693 - 22993449
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||| |||| ||||||||||||||  ||||||||||||||   ||||| | |  | |  || || |||| || ||||| | ||||||| |    
T  22993693 ccaattaggggaacttagaggattcgaaagacctagtctcatctctctcta--tcttttctaaacaactttaattttctatt-atttactattatgcata 22993597  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tat 197  Q
     |||| ||  |||||||| ||||||||||||||||||||||||  |  || | |||||| | |||||||||||||||  ||||||||| |||||   |      
T  22993596 acaaacctcttgcctcaggcactaaaataatttacacatcctatttcatatcgttattgtttaattgagattaacacgatcctcgtggaaacgaacttta 22993497  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  22993496 ttttattacttcgatagtttttagtacacttgctaaaatatctatcag 22993449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 2279528 - 2279394
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  2279528 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 2279429  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| ||||||| ||||| |||||    
T  2279428 ttattacttcgatagt-tttagtatacttgataaaa 2279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 30157940 - 30157810
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt--t 199  Q
    |||| ||||||||||||||| | | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  ||  |    
T  30157940 caaacctactgcctcagacaattataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttaat 30157841  T
Q  200 ttactacttcgatagtatttagtacacttgc 230  Q
    ||| ||||||||||||  || ||||||||||    
T  30157840 ttattacttcgatagttattggtacacttgc 30157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 42354306 - 42354177
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    |||||||||||| |||| | | ||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||||||||  ||||  |  ||||| |    
T  42354306 ctactgcctcaggcacttataaaatttacacatcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaacttattttatt 42354207  T
Q  205 acttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| |||||||||||||||||||    
T  42354206 acttcgatagt-tttagtacacttgctaaaa 42354177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 10967123 - 10967209
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  10967123 caaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgg 10967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 52200110 - 52200361
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatg---- 96  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||| | |||  ||| |||   ||||||||| ||||||| ||||| ||||||         
T  52200110 ccaattaggggaacatcaatgattcgaaagacctagtctcatctctc-catatatttttcaaacatatctttattttctgtt-atttatttttattgcaa 52200207  T
Q  97 -caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga- 194  Q
     |||| |||| | |||||||| | ||  |||||| |||| ||||||| |||||| || ||||||||||||||| |||||||||||||||||||  ||||     
T  52200208 tcaaatcaaatcaactgcctcgggcatcaaaatattttatacatccttaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaa 52200307  T
Q  195 -tatttttactacttcgata-gtatttagtacacttgctaaaatatccatcagt 246  Q
     |  ||||| ||||||||||  | |||| |||||||||||||||||| ||||||    
T  52200308 cttattttattacttcgatacatttttaatacacttgctaaaatatctatcagt 52200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 31549514 - 31549622
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttag 221  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||  ||||  |  ||||| |||||||||||| ||| |    
T  31549514 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcatcgtggatacgaacttattttattacttcgatagtttttgg 31549613  T
Q  222 tacacttgc 230  Q
    |||||||||    
T  31549614 tacacttgc 31549622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 52309612 - 52309382
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| | ||  |||| |||   |||||||| || || |||||||| |||||||||     
T  52309612 ccaattaggggaacatagttgattcgaaagacctgatctcatctctct-tcatattttctaaccgaatctttattttatg-ttatttaaatttatgcaat 52309515  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatt 198  Q
    |  ||| ||   |  || ||   ||||||||||| |||||||||||||| || ||||||||||||||| |||||||  ||||||||||  ||||  |  |    
T  52309514 c--aaattaaatctacaaac---aaaataatttatacatcctaaatatttactttattgctaaattgaaattaacattgtcctcgtggatacgaacttat 52309420  T
Q  199 tttactacttcgata-gtatttagtacacttgctaaaa 235  Q
    |||| ||||||||||  | |||||||||||||||||||    
T  52309419 tttattacttcgatacatttttagtacacttgctaaaa 52309382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 10902270 - 10902334
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  10902270 aaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 10902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12561230 - 12561174
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  12561230 caattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 12561174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 20728509 - 20728449
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 184  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  20728509 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctc 20728449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22416831 - 22416775
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  22416831 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 22416775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37408878 - 37408934
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  37408878 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 37408934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 48063871 - 48063799
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  48063871 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 48063799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52990897 - 52990953
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  52990897 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 52990953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2775679 - 2775726
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2775679 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 2775726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2778922 - 2778969
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2778922 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 2778969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10902137 - 10902184
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10902137 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 10902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 15195176 - 15195109
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15195176 attgagattaaaaccaatcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgc 15195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16244070 - 16244117
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16244070 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 16244117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 17528757 - 17528702
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17528757 caattaggggaacatagatgattcgaacgacctaatctcatctctctcttattctt 17528702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20728644 - 20728597
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20728644 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 20728597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25584874 - 25584921
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25584874 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 25584921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29343871 - 29343824
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29343871 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 29343824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45896578 - 45896625
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45896578 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 45896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 46885276 - 46885343
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  46885276 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 46885343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17040019 - 17039962
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  17040019 ccaattaagggaacatcgatgattcgaaagacctgatctcatttctctcttattcttt 17039962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 17531488 - 17531423
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacactt 228  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  17531488 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacactt 17531423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27092091 - 27092148
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  27092091 ccaattaggagaacatcgatgattcgaaagacctgatctcatctctctattattcttt 27092148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 10881810 - 10881874
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  10881810 aaaataatttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtgg 10881874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 17528593 - 17528521
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| |||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  17528593 attgagattaaaaccagtccttgtgggaacgatatttttactactttgatagtatttggtacacttgccaaaa 17528521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 19304567 - 19304503
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||||||||||| |||||||||| ||||||| |||| ||||||||| |||||||||||    
T  19304567 aaaataatttacacatcctcaatattaaccatattgctgaattaagattaacagagtcctcgtgg 19304503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25442856 - 25442800
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  25442856 ccaattaggggaacataaatgattcgaaagacctaaactcatctctctcttattctt 25442800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 25888380 - 25888246
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||  |||| | | |||||||||||| || |||||||  |||||||||| |||||||||||||||||||||| |  ||||  |  ||    
T  25888380 caaacctactgcctcacgcacttataaaatttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtcgatacgaacttatt 25888281  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| ||||||| |||||||||||    
T  25888280 ttattacttcgatagt-tttagtatacttgctaaaa 25888246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46885137 - 46885193
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  46885137 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcctattctt 46885193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 16244203 - 16244266
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||| |||||||||    
T  16244203 aaaataatttatacatcctaaatatttactttattactaaattgagattaacacggtcctcgtg 16244266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30220002 - 30219947
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattct 56  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  30220002 ccaattaggggaacttagatgattcgaaagacatgatctcatctctctcatattct 30219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 34983621 - 34983554
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | || |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  34983621 attgagattaaaatcaatccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 34983554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43927032 - 43927079
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  43927032 ccaattaggggaacatagatgattcgaaagacatgatctcatctctct 43927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49742916 - 49742869
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49742916 ccaattaggggaacataaatgattcgaaagacctgatctcatctctct 49742869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 54720336 - 54720403
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  54720336 attgagattaaaatcagtccttgtaggaacgatatttttactacttcgatagtatttggtacacttgc 54720403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 54736085 - 54736026
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||    
T  54736085 aatttacacatcctagatattaactttattgctaagttgagattaacacaatcctcgtgg 54736026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 35751640 - 35751686
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  35751640 aattaggggaacatcgatgattcgaaagacctgatctcatctctctc 35751686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 10885192 - 10885249
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  10885192 tttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgg 10885249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 32366962 - 32366890
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  32366962 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 32366890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32367127 - 32367070
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||| ||||||||||||||||||||| | | |||||||||||||||||||||    
T  32367127 ccaattagggaaacatagatgattcgaaagacttaaactcatctctctcttattcttt 32367070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 54461219 - 54461381
Alignment:
Q  8 ggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaa 106  Q
    ||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| |||||||||||||||||||||| || ||||     
T  54461219 ggggaacattgatgactcgaaagacctagtctcatctctccatatatagtttccaaaactatctttattttctgtttatttaattttatgc-aatcaaat 54461317  T
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaa 174  Q
    | | | |  || ||   ||||||||||  |||||||||||||| || |||||||||||||||||||||    
T  54461318 caaat-ctacaaac---aaaataatttttacatcctaaatatttactttattgctaaattgagattaa 54461381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17141605 - 17141661
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||    
T  17141605 ccaattaggggaacatagataattcaaaagacctaagctcatctctctcttattctt 17141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17531653 - 17531597
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  17531653 ccaattagaggaacatagatgattcgaacgacctaaactcatctctctcttattctt 17531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48064032 - 48063976
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||| ||||  | ||||||||||||||||||||    
T  48064032 ccaattaggggaacatagatgattcgaacgacccaaactcatctctctcttattctt 48063976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 3840847 - 3840970
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattttt-actacttcgatag-tatttag 221  Q
    ||||||||||| | |||||||||||| || ||||| |||||||  ||||| ||||| | | ||||||||||||||||| | || ||||||   | |||||    
T  3840847 aaaataatttatagatcctaaatatttactttatttctaaattacgattaccacagactttgtgggaacgatattttttattatttcgatgcatttttag 3840946  T
Q  222 tacacttgctaaaatatccatcag 245  Q
    |||||||||||||||||| |||||    
T  3840947 tacacttgctaaaatatctatcag 3840970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10881677 - 10881720
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatct 44  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  10881677 ccaattaggggaacatagatgattcgaaagacttgatctcatct 10881720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 11785151 - 11785210
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||| |||||| ||||||||||||||||| |||||||||| |||||||||| |||||    
T  11785151 cagtccttgtgggagcgatatttttactactttgatagtatttggtacacttgccaaaat 11785210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 25442668 - 25442621
Alignment:
Q  188 ggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  25442668 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 25442621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 41977330 - 41977393
Alignment:
Q  123 taaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgt 186  Q
    |||||||||||| | |||||||||||| |  ||||||||||||| |||||||||||||||||||    
T  41977330 taaaataatttatatatcctaaatatttattttattgctaaattaagattaacacagtcctcgt 41977393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 3840715 - 3840757
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatct 44  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  3840715 caattaggggaacatggatgattcgaaagacctgatctcatct 3840757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10885054 - 10885147
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttat 95  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    |||  |||||||  |||||||||| ||||| ||||||| ||||||    
T  10885054 ccaattaggggaacatagatgattcgaaagacctagtctcatctcttatatatattttccaaaactatctttattttctg-ttatttacttttat 10885147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 19301141 - 19301087
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacaca 178  Q
    ||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||    
T  19301141 aaaataatttacacatcctgaatattaaccatattgttgaattgagattaacaca 19301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11784963 - 11785016
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt 54  Q
    |||||||||||||||| ||||||||||||||||| |  ||||||||||||||||    
T  11784963 ccaattaggggaacatcgatgattcgaaagacctaagttcatctctctcttatt 11785016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9392931 - 9392969
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatct 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9392931 ccaattaggggaacatagatgattcaaaagacctgatct 9392969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 28266333 - 28266371
Alignment:
Q  206 cttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  28266333 cttcgatagtatttagtacacttgctaaaatatctatca 28266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 35751804 - 35751869
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| | ||||| | ||||||||||||||||||||||||||||||| ||| |||||||||    
T  35751804 attgagattaaaatcagtctttgtgggaacgatatttttactacttcgatagt-tttggtacacttg 35751869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55031993 - 55031947
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctc 47  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||    
T  55031993 ccaattaggggaacatcgatgattcgaaagacctagtctcatctctc 55031947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55034853 - 55034807
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctc 47  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||    
T  55034853 ccaattaggggaacatcgatgattcgaaagacctagtctcatctctc 55034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3292955 - 3292903
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt 54  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||    
T  3292955 ccaattaggggaa-acagatgattcaaaagacctgatctcatctctctcatatt 3292903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 12561057 - 12560985
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||| ||||| | |||||||||| |||||    
T  12561057 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgacagtatgtggtacacttgccaaaat 12560985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34983850 - 34983801
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    ||||| |||||||||||||| ||||||||||||| | |||||||||||||    
T  34983850 ccaatcaggggaacatagatcattcgaaagacctaaactcatctctctct 34983801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41977198 - 41977243
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 46  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  41977198 ccaattaggagaacacagatgattcgaaagatctgatctcatctct 41977243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22783800 - 22783847
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  22783800 ccaattaggggaa-acagaggattcgaaagacctgatctcatctctctc 22783847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22788164 - 22788211
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  22788164 ccaattaggggaa-acagaggattcgaaagacctgatctcatctctctc 22788211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 25486338 - 25486386
Alignment:
Q  9 gggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||| |||||||||||| ||||||||||| | |||||||||||||    
T  25486338 gggaacatcgatgattcgaaaaacctgatctcacccctctcttattctt 25486386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31549369 - 31549416
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  31549369 ccaattagggaaacttagatgattcaaaagacctgatcttatctctct 31549416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 54720168 - 54720215
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||| || ||||||||||||||||||||||| | |||||||||||    
T  54720168 ccaattatggaaacatagatgattcgaaagacctaaactcatctctct 54720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 282064 - 282010
Alignment:
Q  130 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 184  Q
    |||||| ||||||| ||| ||| | ||||||||| ||||||||||||||||||||    
T  282064 atttactcatcctagataataatcatattgctaatttgagattaacacagtcctc 282010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 17039851 - 17039782
Alignment:
Q  164 attgagatt-aacacagtcctcgtgggaacgatatt--tttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||| || |||||||| ||||||||||||||  |||||||||| |||||| ||| ||||||||||    
T  17039851 attgagattgaaaacagtccttgtgggaacgatattattttactactttgatagtttttggtacacttgc 17039782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 22416666 - 22416596
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| ||||||||||  |||||||||||||||||| |||||||||| |||||    
T  22416666 attgagattaaaaccagtccttgtgg-aacgatattt--actacttcgatagtatttggtacacttgccaaaat 22416596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 31857913 - 31857959
Alignment:
Q  142 taaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||| || ||||||||||||||||||||||||| ||| |||||    
T  31857913 taaatatttactttattgctaaattgagattaacacaatccgcgtgg 31857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 25486498 - 25486566
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatt--tttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| | ||||||| ||||||||||||||  ||||||||||| ||||| ||| |||||||||    
T  25486498 attgagattaaaaacagtccttgtgggaacgatattattttactacttcaatagtttttggtacacttg 25486566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 52991085 - 52991134
Alignment:
Q  186 tgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||| |||||||||||||||||||| || ||||||||||| |||| ||||    
T  52991085 tgggcacgatatttttactacttcggtaatatttagtacaattgccaaaa 52991134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 4225729 - 4225641
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatt 218  Q
    |||| ||||||||| || |||| | | |||| |||||||||||| ||||||||| |||  || || ||| |||||||||||||||||||    
T  4225729 tttatacatcctaattaataacttgaatgctgaattgagattaatacagtcctcatggatacaatctttattactacttcgatagtatt 4225641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17546055 - 17546102
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    ||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  17546055 ccaattaggggaacc-agaagattcgaaagatctgatctcatctctctc 17546102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 18542881 - 18542986
Alignment:
Q  132 ttacacatcctaaatattaaccttattgct-aaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacact 227  Q
    |||||||||||| ||| |||| |||||| | |||||||||||||||| |||||| ||| |||||   |  ||||| || ||||||||| |||||||||||    
T  18542881 ttacacatcctatataataacgttattgtttaaattgagattaacacggtcctcatggaaacgaacttgattttattaattcgatagt-tttagtacact 18542979  T
Q  228 tgctaaa 234  Q
    || ||||    
T  18542980 tgttaaa 18542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 9954077 - 9954319
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  9954077 ccaattaggggaacatagatgattcgaaagagctgatctcatctctct--tattcttttccaaaactatctttatattctgtttatttaattttatgcaa 9954174  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9954175 accaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 9954274  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  9954275 ttactacttcgatagtatttagtacacttgctaaaatatctatca 9954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 2379344 - 2379579
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  2379344 ccaattaggggaacatagatgatttgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 2379443  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2379444 ccaaaactactgcctcaggcactaaaataatttacacatcttaaatattaaccttattgctaaattgagattaacagtgtcctcgtgggaacgatatttt 2379543  T
Q  201 tactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||||||||||| |||||||||| |||||    
T  2379544 tactacttcgatagtatttggtacacttgccaaaat 2379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3596791 - 3596555
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3596791 ccaattaggggaacataaatgattcgaaagacctaatctcatctctctcttattctttccaactatatctttacattctgtttatttaattttatgcaaa 3596692  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  ||| |||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  3596691 ccaaaactactgcctaggacaactaaaagaaatttatacatcctaaatatttaccttattgctaaattgagattaacacagtctttgtgggaacgatatt 3596592  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3596591 tttactacttcgatagtatttagtaaacttgctaaaa 3596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 23384762 - 23384526
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23384762 ccaattaggggaacatagatgaatcgaaagacctaatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 23384663  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| |||||||||||||| || ||||| ||||||||| |||||||||||||||||||||||||||||    
T  23384662 ccaaaactactgcctagggcaactaaaagaaatttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcgtgggaacgatatt 23384563  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||| ||||||||||||||||||||||||||||||||    
T  23384562 tttattacttcgatagtatttagtacacttgctaaaa 23384526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 26942445 - 26942208
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26942445 ccaattaggggaacatagatgaatcgaaagacctgatctcatctctctcttattctttccaactctatctttatattttgtttatttaattttatgcaaa 26942346  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| |||||||||||||| || |||||| ||| |||||||||||||||||| ||||||||| |||||    
T  26942345 ccaaaactactgcctagggcaactaaaagaaatttatacatcctaaatatttactttattgataatttgagattaacacagtccacgtgggaacaatatt 26942246  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26942245 tttactacttcgatagtatttagtacacttgctaaaat 26942208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1125745 - 1125500
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||| ||||||| |||||||||||||| || ||||||||||||  | |||||| ||||  |||||||||||||||||||||||||||||||||||    
T  1125745 ccaattaggagaacataaatgattcgaaagacatgctctcatctctct--tgttcttttccaaaactatctttatattctgtttatttaattttatgcaa 1125648  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    ||||||||||||||||||| |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  1125647 accaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcatgggaacgatatt 1125548  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1125547 tttactacttcgatagtatttagtacacttgctaaaatatctatcagt 1125500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 11402371 - 11402608
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11402371 ccaattagggaaacatagatgaatcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 11402470  T
Q  101 ccaaaactactgcctcagacact--aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-t 197  Q
    |||||||||||||||  | || |  |||  |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| |    
T  11402471 ccaaaactactgcctagggcaattaaaagaaatttacacatcctaaattttaaccttattgctaaactgagattaacacagtccttgtgggaacgatatt 11402570  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  11402571 ttttattacttcgataatatttagtacacttgctaaaa 11402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 5737991 - 5737836
Alignment:
Q  82 ttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5737991 ttatttaattttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtc 5737892  T
Q  182 ctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaata 237  Q
    || | || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  5737891 cttgcggaaacgatatttttactacttcgatagtatttagtacacttgataaaata 5737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 14281530 - 14281348
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct--tattcttt-ccaactctatctttatattctgtttatttaattttatgc 97  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  | |||||| ||||  |||||||||| ||||||||||||||||||||||    
T  14281530 ccaattaggggaacatagatgattcgaaagacctgatgtcatctctctctccttttcttttccaaaactatctttattttctgtttatttaattttatgc 14281431  T
Q  98 aaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    || | ||||||||||| |  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14281430 aatc-aaaactactgcgttgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtc 14281348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 2372448 - 2372625
Alignment:
Q  6 taggggaacatagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttatttaattttatgcaaacc 102  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||   |||  |||||||  ||||||||||  ||||||||||||||||||||||| |     
T  2372448 taggggaacatagatgattcgaaagagatgatctcaactctctctccttatcttttccaaaactatctttatcatctgtttatttaattttatgcaatc- 2372546  T
Q  103 aaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    ||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  2372547 aaaactacttcctcggacactaaaataatttacaaatcctagatattaaccttattgctaaattgagattaacacagtc 2372625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 13005303 - 13005482
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttatttaattttatgc 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||   |||  |||||||  |||| ||||| |||||||||||||||||| |||    
T  13005303 ccaattaggggaacatagatgatttgaaagacctgatctcatctctctctccttatcttttccaaaactatttttattttctgtttatttaattttctgc 13005402  T
Q  98 aaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacaca 178  Q
    || | |||||||||||||||| ||   |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  13005403 aatc-aaaactactgcctcaggcaaataaataatttaaacatcctagatattaatcttattgctaaattgagattaacaca 13005482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 30655694 - 30655814
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  30655694 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatttttattacttcgatagtatttagta 30655793  T
Q  224 cacttgctaaaatatccatca 244  Q
    |||||||||||||||| ||||    
T  30655794 cacttgctaaaatatctatca 30655814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 23382052 - 23381946
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacactt 228  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23382052 aatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttattacttcgatagtatttagtacactt 23381953  T
Q  229 gctaaaa 235  Q
    |||||||    
T  23381952 gctaaaa 23381946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2846418 - 2846605
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||| || |||| |||||||||||| ||||||||||| |||| ||||  |||||||  |||||||||| ||||| | | |||||||||| |||    
T  2846418 ccaattagggggacttagaggattcgaaagacttgatctcatctatctccttatcttttccaaaactatctttattttctggtaaattaattttatacaa 2846517  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
     | ||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| | ||||||||||||| |||| ||||    
T  2846518 tc-aaatctactgcctcagacaccaaaataatttacacatcctagatagtaaccttattgctagactgagattaacacaatccttgtgg 2846605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 11188085 - 11187973
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat-ttttactacttcgatagtatttagt 222  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  11188085 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttactacttcgatagtatttagt 11187986  T
Q  223 acacttgctaaaa 235  Q
     ||||||||||||    
T  11187985 gcacttgctaaaa 11187973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9839404 - 9839189
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaatttt-atgcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||  | | |||||| |||| ||||||||||||| |||||     
T  9839404 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcatatt--ttctaaa-caaactttattttct-tttatttaatttttatgcac 9839309  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---ta 196  Q
    || ||| ||| ||||| ||||||| | | ||||||||||||||| ||  |||| |||||||||| |||||||||||||| |||||||||| ||||   ||    
T  9839308 ac-aaatctattgcctaagacacttataaaatttacacatcctagat--taactttattgctaagttgagattaacacaatcctcgtgggtacgaaatta 9839212  T
Q  197 tttttactacttcgatagtattt 219  Q
    |||||| ||||||||||||||||    
T  9839211 tttttattacttcgatagtattt 9839189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 34502559 - 34502706
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  34502559 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 34502658  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatcagttg 248  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  34502659 ttactacttcgatagt-tttagtacacttgctaaaatatctatcagttg 34502706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 23008295 - 23008409
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt---tttactacttcgatagtattta 220  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||| ||   ||||||||||||||||||||||    
T  23008295 aaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtattta 23008394  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  23008395 gtacacttgctaaaa 23008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 23780069 - 23779955
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt---tttactacttcgatagtattta 220  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||| ||   ||||||||||||||||||||||    
T  23780069 aaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtattta 23779970  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  23779969 gtacacttgctaaaa 23779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 11729217 - 11729112
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||    
T  11729217 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacgatatttttattacttcgatagtatttagta 11729118  T
Q  224 cacttg 229  Q
    ||||||    
T  11729117 cacttg 11729112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 28111759 - 28111576
Alignment:
Q  56 tttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaacctt 155  Q
    |||||||  |||||||||| || ||||||||||||||||||||| | |||||||||||||  | |||||||||||||||| ||||||| |||||| ||||    
T  28111759 tttccaaaactatctttattttatgtttatttaattttatgcaatc-aaaactactgcctagggcactaaaataatttacgcatcctagatattatcctt 28111661  T
Q  156 attgctaaattgagattaacacagtcctcgtgggaacga---tat---ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    | |||||||||||||||||||||||||  ||||  ||||   |||   ||||| |||||||||||| |||||||||||||||||||    
T  28111660 agtgctaaattgagattaacacagtccatgtggatacgaacttataaattttattacttcgatagt-tttagtacacttgctaaaa 28111576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 28107707 - 28107586
Alignment:
Q  56 tttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaacctt 155  Q
    |||||||  |||||||||| |||||||||||||||||||||||| | ||||||||  |||  | |||||||||||||||||||||||| |||||||||||    
T  28107707 tttccaaaactatctttattttctgtttatttaattttatgcaatc-aaaactacaacctagggcactaaaataatttacacatcctagatattaacctt 28107609  T
Q  156 attgctaaattgagattaacaca 178  Q
    | |||||||||||||||||||||    
T  28107608 agtgctaaattgagattaacaca 28107586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 5260023 - 5260161
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tat- 197  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||  ||||   |||     
T  5260023 caaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaacttata 5260122  T
Q  198 --ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
      ||||| |||||||||||| ||||||||| |||||||||    
T  5260123 aattttattacttcgatagt-tttagtacatttgctaaaa 5260161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 14966437 - 14966571
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  14966437 caaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 14966536  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  14966537 ttattacttcgatagt-tttagtacacttgctaaaa 14966571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 3826731 - 3826595
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||  ||||  |  |     
T  3826731 caaacctactgcctcaggcacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtccttgtggatacgaacttatc 3826632  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaata 237  Q
    ||| |||||||||||| |||||||||||||||||||||    
T  3826631 ttattacttcgatagt-tttagtacacttgctaaaata 3826595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 14969917 - 14970051
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||| |||  ||||  |  ||    
T  14969917 caaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcatggatacgaacttatt 14970016  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  14970017 ttattacttcgatagt-tttagtacacttgctaaaa 14970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22561173 - 22561077
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||| | |||||||| ||||| ||| ||| ||||||||||    
T  22561173 ccaattaggggaacgtagatgatttgaaagacctgatctcatctctctcttattcttttaaac-caatctttattttctg-ttagttacttttatgcaa 22561077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7128413 - 7128470
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  7128413 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 7128470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18856035 - 18855978
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  18856035 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 18855978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 23842676 - 23842568
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttag 221  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||  ||||  |  ||||| || ||||||||| ||| |    
T  23842676 aaaataatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattatttcgatagtttttgg 23842577  T
Q  222 tacacttgc 230  Q
    |||||||||    
T  23842576 tacacttgc 23842568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 24371453 - 24371567
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtattta 220  Q
    ||||||||||||||||| || ||| ||||  | ||||||||||||||||||||||||||||||||  ||||   |||||||| |||||||||| | ||||    
T  24371453 aaaataatttacacatcttagataataacaattttgctaaattgagattaacacagtcctcgtggatacgaacttatttttattacttcgataat-ttta 24371551  T
Q  221 gtacacttgctaaaat 236  Q
    ||||||||| ||||||    
T  24371552 gtacacttgttaaaat 24371567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4512590 - 4512646
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  4512590 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 4512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 19476281 - 19476353
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  19476281 attgagattaaaatcagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 19476353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26896269 - 26896213
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26896269 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 26896213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30655558 - 30655605
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655558 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 30655605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 32109784 - 32109838
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  32109784 aattaggggaacattgatgattcgaaagacctgatctcatctctcttttattctt 32109838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 5618091 - 5617984
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    |||||||||||| || |||||||  |||||||||| ||||||||||||||||||||||||  || |  |  ||||| |||||||||||| ||||||||||    
T  5618091 aatttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtggatacaaacttattttattacttcgatagt-tttagtacac 5617993  T
Q  227 ttgctaaaa 235  Q
    |||||||||    
T  5617992 ttgctaaaa 5617984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13947132 - 13947189
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  13947132 ccaattaggggaacatagatgattcgaaagacctaaactcatctatctcttattcttt 13947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 17106620 - 17106392
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||  |||| |||   |||||||| || || |||||||||||||||| ||    
T  17106620 ccaattaggggaacatagatgattcgaaagacttgatctcatctctct-tcatattttctaaccgaatctttattttatg-ttatttaattttatgc-aa 17106524  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatt 198  Q
     |||| | | |  || | ||   ||||||||||| |||||||||||||| || ||||||  |||||||||||||||| ||| ||||||  ||||  |  |    
T  17106523 tcaaatcaaat--ct-aaac---aaaataatttatacatcctaaatatttactttattgtgaaattgagattaacactgtcttcgtggatacgaacttat 17106430  T
Q  199 tttactacttcgata-gtatttagtacacttgctaaaa 235  Q
    |||| ||||||||||  | |||||||||||||||||||    
T  17106429 tttattacttcgatacatttttagtacacttgctaaaa 17106392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24155188 - 24155139
Alignment:
Q  186 tgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24155188 tgggaacgatatttttactacttcgatagtatttggtacacttgctaaaa 24155139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24155376 - 24155319
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  24155376 ccaattaggggaacatatatgattcgaaagacctaaactcatctctctcttattcttt 24155319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 24410578 - 24410643
Alignment:
Q  165 ttgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  24410578 ttgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttg 24410643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 6513371 - 6513419
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6513371 caattaggggaatatagatgattcgaaagacctgatctcatctctctct 6513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 10290221 - 10290285
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| |||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  10290221 aaaaaaatttatatatcctaaatattcactttattgctaaattgagattaacacagtcctcgtgg 10290285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 23848018 - 23848082
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || ||| || ||||||||||||||||||||||||||||    
T  23848018 aaaataatttatacatcctaaatatttactttagtgttaaattgagattaacacagtcctcgtgg 23848082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24400293 - 24400349
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  24400293 ccaattagggaaacatagatgattcgaaagacctaaactcatctctctcttattctt 24400349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24410412 - 24410468
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  24410412 ccaattagggaaacatagatgattcgaaagacctaaactcatctctctcttattctt 24410468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 4512770 - 4512823
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  4512770 cagtccttgtgggaacgatatttttactacttcgatagtattcggtacacttgc 4512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 7128578 - 7128650
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  7128578 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 7128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 18855870 - 18855798
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  18855870 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 24400458 - 24400519
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtac 224  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  24400458 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtac 24400519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 26896102 - 26896033
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgcta 232  Q
    ||||||||||| || |||||  |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  26896102 attgagattaaaaccagtccctgtgggaacgatatttttactactttgatagtatttggtacacttgcta 26896033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28107797 - 28107748
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  28107797 ccaattaggggaacatagatgattcgaaatacctgatatcatctctctct 28107748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11125707 - 11125651
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||    
T  11125707 ccaattaggggaacatcgatgattcgaaagacttgatcccatctctatcttattctt 11125651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 13947293 - 13947364
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  13947293 attgagattaaaatcagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaa 13947364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19476116 - 19476172
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  19476116 ccaattaggggaacatagatgattcgaaagaccaaaattcatctctctcttattctt 19476172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 28230875 - 28230946
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  28230875 attgagattaaaatcagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaa 28230946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10290086 - 10290133
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10290086 ccaattcggggaacatagatgattcgaaagacctgatcttatctctct 10290133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20185858 - 20185905
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  20185858 ccaattaggggaacatagatgattcgaaaaacctgatcttatctctct 20185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22150133 - 22150086
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  22150133 ccaattaggggaacatagatgattcgaaaaacctgatcttatctctct 22150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 6514231 - 6514347
Alignment:
Q  123 taaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tat---ttttactacttcgatagta 216  Q
    ||||||||||||||||||||| ||||| ||||||||   |||||||||||||||||||||| || |  ||||   |||   ||||| ||||||||||||     
T  6514231 taaaataatttacacatcctagatatt-accttattataaaattgagattaacacagtccttgtagatacgaacttataaattttattacttcgatagt- 6514328  T
Q  217 tttagtacacttgctaaaa 235  Q
    |||||||||||||||||||    
T  6514329 tttagtacacttgctaaaa 6514347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 32109963 - 32110016
Alignment:
Q  176 acagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||    
T  32109963 acagtccttgtgggtacgatatttttactacttcgatagtttttggtacacttg 32110016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 5738078 - 5738042
Alignment:
Q  12 aacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  5738078 aacatagatgattcgaaagacctgatctcatctctct 5738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 13095631 - 13095497
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||| || ||| || |||||||| |||||||||| |||||||||||| |||| ||||||  || |  |  ||    
T  13095631 caaacctactgcctcaggcacttataaaatttgcaaatcttagatattaactttattgctaagttgagattaacaaagtcatcgtggatacaaacttatt 13095532  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| ||||||||| |||||||||    
T  13095531 ttattacttcgatagt-tttagtacatttgctaaaa 13095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 23842807 - 23842762
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  23842807 caattaggggaacatagat-attcgaaagaactgatctcatctctct 23842762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2372367 - 2372416
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||| ||||||||||||||||||||||||||  |||||||| ||||||||    
T  2372367 ccaactaggggaacatagatgattcgaaagagatgatctcagctctctct 2372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23847882 - 23847932
Alignment:
Q  1 ccaattaggggaacata---gatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||| |||   |||||||||||||||||||||||||||||||    
T  23847882 ccaattaggggaatataaaagatgattcgaaagacctgatctcatctctct 23847932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 11125526 - 11125472
Alignment:
Q  176 acagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||| ||||||| ||||||||||||||||||||| | |||  |||||||||    
T  11125526 acagtccttgtgggaatgatatttttactacttcgataatttttgatacacttgc 11125472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 11192429 - 11192357
Alignment:
Q  165 ttgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||||||||| || ||||||| |||||   || || || |||||||||||| ||||||||||||||||||    
T  11192429 ttgagattaacacggtactcgtggaaacgaacttaattgtattacttcgatagtttttagtacacttgctaaa 11192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13021262 - 13021213
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||||| |||| ||||| ||||||||  ||||||||||||||    
T  13021262 ccaattaggggaacttagaggattcaaaagacctactctcatctctctct 13021213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 17696864 - 17696916
Alignment:
Q  163 aattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagt 215  Q
    |||||| |||||||||||||| || |||||||||||| ||||||||||||||||    
T  17696864 aattgaaattaacacagtccttgt-ggaacgatatttattactacttcgatagt 17696916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 22561005 - 22560937
Alignment:
Q  164 attgagattaacacagtcctcgtgggaacgatat--ttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||||| |||||| ||||||||||| |  ||||| ||||||||||||| || || |||||||    
T  22561005 attgagattaacagagtccttgtgggaacgatcttattttattacttcgatagtaattggtgcacttgc 22560937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 31123677 - 31123777
Alignment:
Q  131 tttacacatcctaaatattaaccttattgcta-aattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatttagtacactt 228  Q
    |||||| |||||||| | |||| | ||||||| |||||||||||| |||||||| || ||||| |||||| |||||||||||||| | ||| ||||| ||    
T  31123677 tttacatatcctaaacaataacgtcattgctataattgagattaatacagtccttgt-ggaacaatatttattactacttcgatactttttggtacattt 31123775  T
Q  229 gc 230  Q
    ||    
T  31123776 gc 31123777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 2331555 - 2331622
Alignment:
Q  163 aattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||| |||||||| |||| ||  |||||| |||||||||||||||| ||| ||||||||||    
T  2331555 aattgagattaatacagtccttgtgg-aataatatttattactacttcgatagtttttggtacacttgc 2331622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 9185435 - 9185201
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  9185435 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 9185336  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  9185335 ccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgggaacaatatttt 9185236  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||| |||||||||| ||||    
T  9185235 tactacttcgatagtatttggtacacttgccaaaa 9185201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 9188663 - 9188429
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  9188663 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttacattctgtttatttaattttatgcaaa 9188564  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9188563 ccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctgaattgagattaacacagtactcgtgggaacgatatttt 9188464  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||| |||||||||| ||||    
T  9188463 tactacttcgatagtatttggtacacttgccaaaa 9188429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 29440589 - 29440821
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29440589 ccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttttctttccaaaactatctttatattctgtttatttaattttatgcaaa 29440688  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29440689 ccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtggaaacgatatttt 29440788  T
Q  201 tactacttcgatagtatttagtacacttgctaa 233  Q
    |||||||||||||||||||||||||||||||||    
T  29440789 tactacttcgatagtatttagtacacttgctaa 29440821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 25959699 - 25959457
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  25959699 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct--tattcttttccaaaactatctttatattctgtttatttaattttatgcaa 25959602  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25959601 accaaaactactgcctcaagcactaaaataatttacacatcctaaatgttaaccttattgctaaattgagattaacacagtcatcgtgggaacgatattt 25959502  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  25959501 ttactacttcgatagtatttagtacacttgctaaaatatctatca 25959457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37279687 - 37279453
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  37279687 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtttatttaattttatgcaaa 37279588  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  37279587 ccaaaaatactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgggaacgatatttt 37279488  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||  || |||||||||| ||||    
T  37279487 tactacttcgatagttattggtacacttgccaaaa 37279453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 8888730 - 8888974
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8888730 ccaattaggggaacatagatgatttgaaagacctaatctcatctctctcttattctttccaactctatctttatattatgttgatttaattttatgcaaa 8888829  T
Q  101 ccaaaactactgcctcagaca-ctaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    |||||||||||||||  | || |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8888830 ccaaaactactgcctagggcaactaaga-aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 8888928  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  8888929 ttactacttcgatagtatttagtacacttgctaaaatatctatcag 8888974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25874275 - 25874513
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| ||||   ||||||||| ||| ||||||||||||||||||||    
T  25874275 ccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttatctttaccaaaattatctttattttc-gtttatttaattttatgcaa 25874373  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25874374 accaaaactactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacaatattt 25874473  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatc 239  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  25874474 ttactacttcgatagtatttagtacacttgctaaattatc 25874513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 25870878 - 25871121
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| ||||   ||||||||| ||| ||||||||||||||||||||    
T  25870878 ccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttatcttttccaaaattatctttattttc-gtttatttaattttatgcaa 25870976  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25870977 accaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtaggaacgatattt 25871076  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  25871077 ttactacttcgatagtatttagtacacttgctaaattatctatca 25871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24238462 - 24238700
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatg---- 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||| ||||| ||||||         
T  24238462 ccaattaggggaacatagataattcgaaagacctgatctcatctttctcttattctttccaattcgatctttattttctgtt-atttacttttattgcaa 24238560  T
Q  97 -caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 195  Q
     |||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24238561 tcaaaccaaaactactgtctcgggcactaaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 24238660  T
Q  196 atttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24238661 atttttactacttcgatagtatttagtacacttgctaaaa 24238700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 30274779 - 30274536
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||  |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  30274779 ccaattaggagaacatagatgattcgaaagacatgctctcatctctct--tattcttttccaaaactatctttatattctgtttatttaattttatgcaa 30274682  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    ||||||||||||||||||| |||||||| || |||| |||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||||    
T  30274681 accaaaactactgcctcagtcactaaaagaaatttatacatcctatatatttacgttattgctaaattgagattaacacagtcctcatgggaacgatatt 30274582  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  30274581 tttactacttcgatagtatttagtacacttgctaaaatatctatca 30274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24235190 - 24235428
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatg---- 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| || |||||||| ||||||| ||||| ||||||         
T  24235190 ccaattaggggaacatagataattcgaaagacctgatctcatctttctcttattcttttcaattcgatctttattttctgtt-atttacttttattgcaa 24235288  T
Q  97 -caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 195  Q
     |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24235289 tcaaaccaaaactactgcctcgggcactaaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgggaacgat 24235388  T
Q  196 atttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  24235389 atttttactacttcgatagtatttaataaacttgctaaaa 24235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 11347906 - 11347662
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttattta-attttatgcaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| |||||||  ||||| ||||    
T  11347906 ccaattaggggaacatagatgattcgaaagacctgatctcatctatctctcattctttccaactctatc-ttattttctg-ttatttactttttaagcaa 11347809  T
Q  100 accaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    ||||||||||||||||  | | |||||||  |||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11347808 accaaaactactgcctagggcaactaaaagaaatttatacatcctaattatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 11347709  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11347708 ttttactactttgatagtatttagtacacttgctaaaatatctatca 11347662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 45499303 - 45499135
Alignment:
Q  66 tatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaat 165  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  45499303 tatctttattttc-gtttatttaattttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaat 45499205  T
Q  166 tgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45499204 tgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 45499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 33310761 - 33311003
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  33310761 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 33310858  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33310859 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 33310957  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  33310958 tttactacttcgatagtatttggtacacttgccaaaatatctatca 33311003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 38015614 - 38015839
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||  || ||||||| |||||| |||||||||     
T  38015614 caattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctc-attttctgtt-atttaaatttatgcaat 38015711  T
Q  101 ccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    | |||||||||||||| | |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  38015712 c-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacaatattt 38015810  T
Q  200 ttactacttcgatagtatttagtacactt 228  Q
    |||||||||||||||||||| ||||||||    
T  38015811 ttactacttcgatagtatttggtacactt 38015839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 40677682 - 40677541
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  40677682 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 40677583  T
Q  189 gaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  40677582 gaacgatatttttactacttcgatagttattggtacacttgc 40677541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 36808453 - 36808267
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||| || | |||| |||||||||||||||||||||||| ||||  |||||||  |||| ||||| |||||||||||||||||||||||     
T  36808453 ccaattaggggaacttaaaggatttgaaagacctgatctcatctctctccttatcttttccaaaactat-tttattttctgtttatttaattttatgcac 36808355  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    || ||| |||||||||||  |||| | | ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  36808354 ac-aaacctactgcctcaatcacttataaaatttacacatcctagatattaaccttattgctaaattgagattaatacagtcctcgtgg 36808267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 31427552 - 31427314
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  31427552 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 31427455  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
    | | ||||| |||||||| | |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||       
T  31427454 atc-aaaaccactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcttcgtggatacgaact 31427356  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||   | |||||||||||||||||||    
T  31427355 taattttattacttcgatgcatttttagtacacttgctaaaa 31427314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 45457257 - 45457494
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgcaa 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||     
T  45457257 caattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgcac 45457354  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---t 195  Q
    |||||  |||||| ||||| |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||   |    
T  45457355 accaac-ctactgtctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactt 45457453  T
Q  196 atttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    | ||||| |||||||||   |||||||||||||||||||||    
T  45457454 aattttattacttcgatgcatatttagtacacttgctaaaa 45457494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 42368587 - 42368476
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||    
T  42368587 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacgatatttttattacttcgatagtatttagta 42368488  T
Q  224 cacttgctaaaa 235  Q
    ||||||||||||    
T  42368487 cacttgctaaaa 42368476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 10601070 - 10601184
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    |||||| |||| ||||| |||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  10601070 aaaatattttatacatcttaaatatttactttattgctaaattgaaattaacacagtcctcgtgtgaacgatatttttactacttcgatagtatttggta 10601169  T
Q  224 cacttgctaaaatat 238  Q
    ||||||| |||||||    
T  10601170 cacttgccaaaatat 10601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 45453968 - 45454206
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttc-caactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||| | ||| || ||||||||||||||||||||||||||||||| |  |||||  |||  ||||||| || ||||||| ||||| |||| |||||    
T  45453968 ccaattagagaaacttatatgattcgaaagacctgatctcatctctctccttgtctttttcaaaactatctt-attttctgtt-atttactttttatgca 45454065  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
     |||||  |||||||||||| |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  || |       
T  45454066 caccaac-ctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaact 45454164  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||   |||||||||||||||||||||    
T  45454165 taattttattacttcgatgcatatttagtacacttgctaaaa 45454206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 3252534 - 3252658
Alignment:
Q  109 actgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactactt 208  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| |||||||||  |||||||||||||||| ||||||| ||| | ||||||| |||||    
T  3252534 actgcctcagacacttataaaatttacacatcctagatattaactttattgctatgttgagattaacacagttctcgtggaaac-aaatttttattactt 3252632  T
Q  209 cgatagtatttagtacacttgctaaa 234  Q
    ||||||| ||||||||||||||||||    
T  3252633 cgatagtttttagtacacttgctaaa 3252658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 40781699 - 40781812
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || |||||    
T  40781699 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacgtttttag 40781798  T
Q  222 tacacttgctaaaa 235  Q
    ||||||||||||||    
T  40781799 tacacttgctaaaa 40781812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 1503328 - 1503198
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  1503328 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttattttatt 1503229  T
Q  205 acttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| ||||||||||||||||||||    
T  1503228 acttcgatagt-tttagtacacttgctaaaat 1503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 1506532 - 1506402
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  1506532 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttattttatt 1506433  T
Q  205 acttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| ||||||||||||||||||||    
T  1506432 acttcgatagt-tttagtacacttgctaaaat 1506402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 25138942 - 25138692
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| || || ||| ||||||||||||||||||||||||||||||||  |||||||    |||||||| || |||| ||||||||||||||||     
T  25138942 ccaattagggaaatatcgataattcgaaagacctgatctcatctctctcttatattttccaaacaaatctttattttatgtt-atttaattttatgcaat 25138844  T
Q  101 c----caaaactactgcctcagacact-aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga- 194  Q
    |    |||| |||||||||  | ||   ||||||||||| ||||||||| |||| || ||||||||||||||||||||||||| | |||||||  ||||     
T  25138843 caaatcaaatctactgcctagggcaaacaaaataatttatacatcctaagtatttactttattgctaaattgagattaacacatttctcgtggatacgaa 25138744  T
Q  195 -tatttttactacttcgata-gtatttagtacacttgctaaaatatccatca 244  Q
     |  ||||| ||||||||||  | ||||||||||||||||||||||| ||||    
T  25138743 cttattttattacttcgatatatttttagtacacttgctaaaatatctatca 25138692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 25820856 - 25820602
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatg----- 96  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||| | |||  |||||||   ||||||||| ||||||| ||||| ||||||          
T  25820856 caattaggggaacatcgatgattcgaaagacctagtctcatctctc-catatattttccaaacatatctttattttctgtt-atttacttttattgcaat 25820759  T
Q  97 caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga-- 194  Q
    |||| |||| | |||||||| | ||  |||||| |||| |||||||||||||| || ||||||||||||||| |||||||||||||||||||  ||||      
T  25820758 caaatcaaatcaactgcctcgggcataaaaatattttatacatcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaac 25820659  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaatatccatcagttgtt 250  Q
    |  ||||| |||||||||   | ||||||||||||||||||||||| |||| |||||    
T  25820658 ttattttattacttcgatgcatttttagtacacttgctaaaatatctatcaattgtt 25820602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 13518509 - 13518643
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||| ||||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  13518509 caaacctactgcctcaaacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 13518608  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  13518609 ttattacttcgatagt-tttagtacacttgctaaaa 13518643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 11060005 - 11060142
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||  ||||  |  ||    
T  11060005 caaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagttctcgtggatacgaacttatt 11060104  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||| ||||||||||||    
T  11060105 ttattacttcgatagt-tttagtacatttgctaaaatat 11060142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 34682872 - 34682978
Alignment:
Q  82 ttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    ||||||| ||||||||| | |||| ||||||||||||||||||||||||||||  ||||||| ||||||||  ||||||||||||||||||| || ||||    
T  34682872 ttatttacttttatgcacaacaaacctactgcctcagacactaaaataatttattcatcctagatattaacactattgctaaattgagattaccatagtc 34682971  T
Q  182 ctcgtgg 188  Q
    |||||||    
T  34682972 ctcgtgg 34682978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 15470685 - 15470749
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15470685 aaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtgg 15470749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 5105935 - 5106024
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgata 213  Q
    ||||||||||| ||||||| |||||| || ||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  5105935 aaaataatttatacatcctgaatatttactttatttctaaattgagattaacacagtccttgtgagaacgatatttttattacttcgata 5106024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 43723927 - 43724042
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  43723927 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatatattttta 43724026  T
Q  221 gtacacttgctaaaat 236  Q
    ||||||||||||||||    
T  43724027 gtacacttgctaaaat 43724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27266883 - 27266940
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27266883 ccaattaggggaacatagatgatttgaaagacctgatctcatctctctcttattcttt 27266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 31585818 - 31585706
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||| ||||| || ||||| ||||||||||||||||||||| || |||||||| ||| |||||| |||||||||| || |||||    
T  31585818 aaaataatttatacatcctagatatttactttatttctaaattgagattaacacagttcttgtgggaac-atattttttattacttcgatacgtttttag 31585720  T
Q  222 tacacttgctaaaa 235  Q
    ||||||||||||||    
T  31585719 tacacttgctaaaa 31585706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 23205431 - 23205497
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23205431 attgagattaaaaccagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttg 23205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 23677035 - 23677101
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23677035 attgagattaaaaccagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttg 23677101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 43207766 - 43207649
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattttt-actacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||       | ||||||||||||||||| | |||||||||| || |||||    
T  43207766 aaaataatttatacatcctaaatatttactttatttctaaattgagattaac-------ttgtgggaacgatattttttattacttcgatacgtttttag 43207674  T
Q  222 tacacttgctaaaatatccatcagt 246  Q
    |||||||||||||||||| ||||||    
T  43207673 tacacttgctaaaatatctatcagt 43207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1386433 - 1386376
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  1386433 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 1386376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9966380 - 9966323
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  9966380 ccaattaggggaacatagatgattcaaaagacttgatctcatctctctcttattcttt 9966323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 13971905 - 13971725
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||  |||| |||   ||||  || || |||| ||||||||||||||||     
T  13971905 ccaattaggggaacatagatgattcgaaagacctgatatcatctctct-tcatattttctaaccaaatctacattttatgtt-atttaattttatgcaat 13971808  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    | ||| | | | |  || |||   |||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  13971807 c-aaatcaaat-ctacaaaca---aaataatttatacatcctaaatattcactttattgctaaattgagattaacaaagtcctcgtgg 13971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16790768 - 16790711
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  16790768 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 16790711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 6826998 - 6827062
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  6826998 aaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 6827062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12219890 - 12219946
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  12219890 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 12219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13137035 - 13137082
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13137035 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 13137082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15470552 - 15470599
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15470552 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 15470599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 16179404 - 16179471
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  16179404 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 16179471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31585951 - 31585904
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31585951 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 31585904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40781566 - 40781613
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40781566 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 40781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43207901 - 43207854
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43207901 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 43207854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43723794 - 43723841
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43723794 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 43723841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 26366028 - 26366205
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||   |||  |||||||  |||||||||| ||||||| ||||| ||||||   ||    
T  26366028 ccaattaggggaacatagataattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtt-atttacttttattgcaa 26366126  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
     |||| ||||        | || ||||||||||| |||||||||||||| || |||||||  ||||||||||||||||||||||||||    
T  26366127 tcaaatctac--------aaac-aaaataatttatacatcctaaatatttactttattgccgaattgagattaacacagtcctcgtgg 26366205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 40258971 - 40258913
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  40258971 cagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 40258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15703854 - 15703747
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    ||||||||||||||| |||||||| |||||||||| |||| ||||||| |||||||||||  ||||  |  ||||| |||||||||||| |||||| |||    
T  15703854 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgatagt-tttagtgcac 15703756  T
Q  227 ttgctaaaa 235  Q
    |||||||||    
T  15703755 ttgctaaaa 15703747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 15719158 - 15719051
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    ||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||  ||||  |  ||||| |||||| ||||| ||||||||||    
T  15719158 aatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaacttattttattacttccatagt-tttagtacac 15719060  T
Q  227 ttgctaaaa 235  Q
    ||| |||||    
T  15719059 ttggtaaaa 15719051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37937230 - 37937174
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  37937230 ccaattaggggaacatcgatgattcgaaagacctaaactcatctctctcttattctt 37937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40259150 - 40259094
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  40259150 ccaattaggggaacatagatgattcgaacgacctaaactcatctctctcttattctt 40259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22021162 - 22021251
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttattt 87  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||   |||  || ||||  |||||||||| ||||||||||||    
T  22021162 ccaattagggtaacatagatgattcgaaagaccttatctcatctctctctccttatctttaccaaaactatctttattttctgtttattt 22021251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 22631119 - 22631170
Alignment:
Q  179 gtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22631119 gtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 22631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 12220057 - 12220123
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  12220057 attgagattaaaatcagtccttgtgggaacgaaatttttactacttcgatagtatttggtacacttg 12220123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 1386270 - 1386198
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  1386270 attgagattaaaaccagtccttgtgggaacgatatttt-actacttcgatagtatttggtacacttgccaaaat 1386198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3875381 - 3875437
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  3875381 ccaattaggggaacataggtgattcgaaagacctaaactcatctttctcttattctt 3875437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 13137115 - 13137179
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | || ||||||||| || ||||||||||||||||||||| |||||||||||||    
T  13137115 aaaataatttatatattctaaatatttactttattgctaaattgagattaagacagtcctcgtgg 13137179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22630935 - 22630991
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  22630935 ccaattaagggaacataaatgattcgaaagacctaaactcatctctctcttattctt 22630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 3875564 - 3875615
Alignment:
Q  179 gtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  3875564 gtccttgtgggaacgatatttttactacttcgatagtatttgatacacttgc 3875615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5105821 - 5105868
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  5105821 ccaattaggggaacatagataatttgaaagacctgatctcatctctct 5105868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5666612 - 5666658
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  5666612 ccaattaggggaacatagat-attcgaaagacctgatctcatctctct 5666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6826865 - 6826908
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatct 44  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  6826865 ccaattaggggagcatagatgattcgaaagacctgatctcatct 6826908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 37937044 - 37936993
Alignment:
Q  185 gtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  37937044 gtgggaatgatatttttactacttcgatagtatttggtacacttgccaaaat 37936993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 5666745 - 5666806
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgt 186  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||| ||| ||||||||||    
T  5666745 aaaataatttatacatcctaaatatta-ctttattgctaaattgagatcaacgcagtcctcgt 5666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45493167 - 45493118
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  45493167 ccaattagggaaacatagatgactcgaaaaacctgatctcatctctctct 45493118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45500909 - 45500860
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  45500909 ccaattagggaaacatagatgactcgaaaaacctgatctcatctctctct 45500860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 16790603 - 16790532
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| |||| | |||||||||||||||||||||||||||| |||||||||| ||||    
T  16790603 attgagattaaaaccagtccttgtgg-agcgatatttttactacttcgatagtatttggtacacttgccaaaa 16790532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 17877201 - 17877256
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||| ||| ||||||||||||||||| | |||||||| |||||||||||    
T  17877201 caattaggggagcatcgatgattcgaaagacctaaactcatctccctcttattctt 17877256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42368722 - 42368675
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  42368722 ccaattaggggaacataaatgatttgaaagacctgatcttatctctct 42368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 11056547 - 11056608
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaa 163  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| ||||||||||    
T  11056547 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaa 11056608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16179221 - 16179263
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatc 43  Q
    |||||||||||||||| ||||||||||||||||| | ||||||    
T  16179221 ccaattaggggaacatcgatgattcgaaagacctaaactcatc 16179263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 17877390 - 17877435
Alignment:
Q  185 gtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||||    
T  17877390 gtgggaccgatatttttactacttcggtagtatttgatacacttgc 17877435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 16953886 - 16954129
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  16953886 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaaaactatctttatattctgtt-atttaattttatgcaaa 16953984  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  16953985 ccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaacgttattgttgaattgagattaacacagtcctcgtgggaacgatatttt 16954084  T
Q  201 tactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||    
T  16954085 tactacttcgatagtatttggtacacttgccaaaatatctatcag 16954129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 25591489 - 25591255
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||  |||||||||||||||||||||||| |||| |||||    
T  25591489 ccaattaggggaacatagatgattcgaaacacctgatctcatctctct--tattcttttccaaaactatctttatattctgtttatttactttttatgca 25591392  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  25591391 aatcaaaactactacctcaggcactaaaataatttacacatcctaaatattaaccttatcgctaaattgagattaacacagttttcgtgggaacgatatt 25591292  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  25591291 tttaccacttcgataatatttagtacacttgctaaaa 25591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 18825897 - 18825655
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||  ||||||| || ||||||| |||||| ||||| |||    
T  18825897 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttttcttttccaaaactatctt-attttctgtt-atttaaatttatacaa 18825800  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||| ||||||||||| |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18825799 tc-aaaattactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 18825701  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  18825700 tttactacttcgatagtatttggtacacttgccaaaaaatctatca 18825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 10664008 - 10664165
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  10664008 ccaattagggaaacatagatgactcgaaagacctgatctcatctctctctttttctttccaaaactatctttatattctgtttatttaattttatgcaaa 10664107  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttatt 158  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  10664108 ccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttatt 10664165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18721291 - 18721062
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    |||  |||||||| |||||||||| ||||||||||||||||||||||||     
T  18721291 ccaattaggggaacatagatgattcgaaagacctagtctcatctcttatatatattttccaacactatctttattttctgtttatttaattttatgcaat 18721192  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    | ||| | | | |  || |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18721191 c-aaatcaaat-ctacaaaca---aaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 18721097  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||| ||||||||||||| |||||||||||    
T  18721096 tactacttcaatagtatttagtatacttgctaaaa 18721062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18824404 - 18824179
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  18824404 ccaattaggggaacatcgatgattcgaaatacctgatctcatctctctccttttcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 18824307  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18824306 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 18824208  T
Q  199 tttactacttcgatagtatttagtacact 227  Q
    ||||||||||||||||||||| |||||||    
T  18824207 tttactacttcgatagtatttggtacact 18824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 45155279 - 45155040
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||  |||||||||| ||||||||||||||||||||||||    
T  45155279 ccaattaggggaacatagatgattcgaaagacctgatctcagctctctccttatcttttccaaaactatctttattttctgtttatttaattttatgcaa 45155180  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---ta 196  Q
     | |||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||  ||||   ||    
T  45155179 tc-aaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctgtggatacgaactta 45155081  T
Q  197 t---ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |   ||||| |||||||||||| |||||||||||||||||||    
T  45155080 taaattttattacttcgatagt-tttagtacacttgctaaaa 45155040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 5584330 - 5584211
Alignment:
Q  113 cctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgat 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  5584330 cctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtgagaacgatatttttactacttcgat 5584231  T
Q  213 agtatttagtacacttgcta 232  Q
    ||||||||||||||||||||    
T  5584230 agtatttagtacacttgcta 5584211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 10664190 - 10664295
Alignment:
Q  130 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10664190 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 10664289  T
Q  230 ctaaaa 235  Q
    ||||||    
T  10664290 ctaaaa 10664295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 23597440 - 23597554
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23597440 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 23597539  T
Q  224 cacttgctaaaatat 238  Q
     ||||||||||||||    
T  23597540 tacttgctaaaatat 23597554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 25231190 - 25231372
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttatttaattttatgc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||   |||  |||||||   ||||||||| |||||||||||||| |||||||    
T  25231190 ccaattaggggaacatagatgattcgaaagacctgatctcaactctctctctttatcttttccaaaattatctttattttctgtttatttaactttatgc 25231289  T
Q  98 aaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    || | ||| ||||||| |||| || | ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  25231290 aatctaaa-ctactgcttcaggcattgaaataatttatccatcctaaatattaaacttattgctaaattgagattaacacagtc 25231372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 23643929 - 23644165
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct-cttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||| |||||  |||||||  |||||||||| |||||||||||||||||||||| |    
T  23643929 ccaattaggggaacatcgatgattcgaacgacctgatatcatctctctccttatcttttccaaaactatctttattttctgtttatttaattttatgc-a 23644027  T
Q  100 accaaaactactgcct-cagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--ta 196  Q
    | |||| |||||||||   || |  ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||||  ||||  |     
T  23644028 atcaaatctactgcctagggaaaacaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggatacgaactt 23644127  T
Q  197 tttttactacttcgatagtatttagtacacttgctaaaa 235  Q
     ||||| || ||||||||| |||||| ||||||||||||    
T  23644128 attttattatttcgatagt-tttagttcacttgctaaaa 23644165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 38248409 - 38248270
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattc-tgtttatttaattttatgca 98  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||  |||||||||| ||| |||||||||||||||||||     
T  38248409 ccaattaggggaacatagatgattcgaaagacctgatcgcatctctctctttatcttttccaaaactatctttattttcttgtttatttaattttatgc- 38248311  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacat 139  Q
    || |||||||||||| || | ||||||||||||||||||||    
T  38248310 aatcaaaactactgcatcgggcactaaaataatttacacat 38248270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 22173933 - 22173709
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | ||  |||| |||   |||||||| | ||||| ||||||||||||||||     
T  22173933 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctct-tcatattttctaaccgaatctttatttcctgtt-atttaattttatgcaat 22173836  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttt 200  Q
    | ||| | | |  || |   || ||||||||||| |||||||||||||| || ||||| |||||||||||||||||| |||||||||| ||||||| |||    
T  22173835 c-aaatcaaat--ctaa---ac-aaaataatttatacatcctaaatatttactttatttctaaattgagattaacactgtcctcgtggaaacgataattt 22173743  T
Q  201 tactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||| ||| |||||||||| ||||    
T  22173742 tactacttcgatagt-tttggtacacttgccaaaa 22173709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 20887777 - 20887889
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgatagtatttagt 222  Q
    ||||||||||| ||||||||||||||  | ||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  20887777 aaaataatttatacatcctaaatatttcctttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatagtatttagt 20887876  T
Q  223 acacttgctaaaa 235  Q
    | |||||||||||    
T  20887877 atacttgctaaaa 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14589631 - 14589395
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||| |  ||||| ||||  ||||||| || || |||| ||||| |||| |||||    
T  14589631 ccaattaggggaacatcgatgattcgaaatacctaatctcatctctctccttgtcttttccaaaactatctt-attttatgtt-atttactttttatgca 14589534  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
     |||||  |||||||||| | |||||||| || ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||   ||||       
T  14589533 caccaac-ctactgcctcgggcactaaaagaaatttacacatcctacacattaacattattgctaaattgagattaacacagtcctcgtgaatacgaact 14589435  T
Q  195 tatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||| | |||||||||||||||||||    
T  14589434 taattttattacttcgataat-tttagtacacttgctaaaa 14589395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 14188378 - 14188515
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||  ||||  |  ||    
T  14188378 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacgcagtcctcgtggatacgaacttatt 14188477  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  14188478 ttattacttcgatagt-tttagtacacttgctaaaatat 14188515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 31986499 - 31986628
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||   ||||  |  ||||| |    
T  31986499 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttatt 31986598  T
Q  205 acttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| |||||||||||||||||||    
T  31986599 acttcgatagt-tttagtacacttgctaaaa 31986628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 36710646 - 36710466
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct-cttattctttccaactctatctttatattctgtttattta-attttatgca 98  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |  |||||||  ||||||   |||| |  |||||||  |||||||||    
T  36710646 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatct---tatttttgttatttactttttatgca 36710550  T
Q  99 aaccaaaactactgcctcagacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
     ||| || |||||||||  | ||||||||  ||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  36710549 cacc-aacctactgccttgggcactaaaagaaatttacacatcctagatattaaatttattgctaaattgagattaacacagtcc 36710466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 14421856 - 14422039
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctc---ttattctttccaactctatctttatattctgtttatttaattttatgca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||||||  ||||| |||| | ||| ||||||||||||||||     
T  14421856 caattaggggaacatagatgattcgaaagacctgatctcatctctctctctttatcttttccaaaactatc-ttatttcctg-ttatttaattttatgc- 14421952  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    || |||| | |   |  || ||   ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  14421953 aatcaaatcaaaatctacaaac---aaaataatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtgg 14422039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 30645692 - 30645829
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  30645692 caaacctactgcctcaggcacttataaaatttacacatcctatatatttactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 30645791  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||| | ||||||||||||||||||||||    
T  30645792 ttattacttcgataat-tttagtacacttgctaaaatat 30645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 33883360 - 33883122
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||| ||||||||||||||||||||| | | |||| |||||||||  ||||| ||||  |||||||||| ||||||| ||||| |||| || ||    
T  33883360 ccaattagggaaacatagatgattcgaaagacttaaactcacctctctctttatcttttccaaaactatctttattttctgtt-atttactttttataca 33883262  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
     |||||  ||||| |||  | |||||||| || ||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||  ||||       
T  33883261 caccaac-ctactaccttgggcactaaaagaaatttacacatcctatatattaacgt-attgctaaattgagattaacacagtcctcgtggatacgaact 33883164  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    || ||||| |||||||||   | |||||||||||||||||||    
T  33883163 taattttattacttcgatgcatttttagtacacttgctaaaa 33883122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 37681442 - 37681350
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
    ||||||||||| | |||||||| |||||  ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  37681442 attttatgcaatc-aaaactaccgcctcgaacactaaaataatttacacatcctagatagtaaccttattgttaaattgagattaacacagtcc 37681350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 8911923 - 8911995
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8911923 attgagattaaaatcagtccttgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 8911995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 31981567 - 31981701
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| | |  ||||  |  ||    
T  31981567 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttatt 31981666  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  31981667 ttattacttcgatagt-tttagtacacttgctaaaa 31981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 20262762 - 20262905
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt--t 199  Q
    |||| ||||||||| || |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||  ||||  ||  |    
T  20262762 caaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttact 20262861  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
     || |||||||||||| ||||||||||||| ||||||||| ||||    
T  20262862 gtattacttcgatagt-tttagtacacttgttaaaatatctatca 20262905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 21049392 - 21049535
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt--t 199  Q
    |||| ||||||||| || |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||  ||||  ||  |    
T  21049392 caaacctactgcctgaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttact 21049491  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
     || |||||||||||| ||||||||||||| ||||||||| ||||    
T  21049492 gtattacttcgatagt-tttagtacacttgttaaaatatctatca 21049535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 5980179 - 5980115
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  5980179 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 5980115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 10498096 - 10498024
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  10498096 attgagattaaaacgagtcctcgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 10498024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10498224 - 10498167
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  10498224 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 10498167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 5964463 - 5964597
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||| ||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||  ||||  |  ||    
T  5964463 caaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatggatacgaacttatt 5964562  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||| ||||||| ||||||    
T  5964563 ttattacttcgatagt-tttaatacacttactaaaa 5964597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12516462 - 12516383
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgt 81  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||| | |||||||| ||||||    
T  12516462 ccaattaggggaatatagatgattcgaaagacctgatttcatctctctctcattctttacaac-caatctttattttctgt 12516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23619374 - 23619318
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  23619374 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 23619318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 31284948 - 31285020
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  31284948 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgccaaaa 31285020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 4868488 - 4868596
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtaca 225  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||| |  ||||   |||||||| |||||||||||| |||||||||    
T  4868488 aatttacacatcctaaatattaactttattgctaatttgatattaacacattcctcgttgatacgaacttatttttattacttcgatagt-tttagtaca 4868586  T
Q  226 cttgctaaaa 235  Q
    | || |||||    
T  4868587 catgttaaaa 4868596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5584406 - 5584359
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5584406 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 5584359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20887644 - 20887691
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20887644 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 20887691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 44026936 - 44026869
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  44026936 attgagattaaaatcagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 44026869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 43681761 - 43681707
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacaca 178  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  43681761 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacaca 43681707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 18695859 - 18695752
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    ||||||||||||||| |||||||| |||||||||| |||| ||||||| |||||||||||  ||||  |  ||||| |||||||||||| |||||| |||    
T  18695859 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgatagt-tttagtgcac 18695761  T
Q  227 ttgctaaaa 235  Q
    |||||||||    
T  18695760 ttgctaaaa 18695752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 12583253 - 12583317
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  12583253 aaaataatttatatatcctaaatatttactttattgctaaattgagattaacatagtcctcgtgg 12583317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31284783 - 31284839
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  31284783 ccaattaggggaacatagatgattcgaatgacctaaactcatctctctcttattctt 31284839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 2560829 - 2560896
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2560829 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 2560896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 44027102 - 44027047
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  44027102 caattaggggaacatagatgattcgaaagacctaaactcatttctctcttattctt 44027047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13196966 - 13197028
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaac 63  Q
    ||||||| | |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  13196966 ccaattaagagaacatagatgatttgaaagacctgatctcatctatctcttattctttacaac 13197028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5980323 - 5980270
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt 54  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  5980323 ccaattaagggaacatagatgattcgaaagacatgatctcatctctctcatatt 5980270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 25594665 - 25594620
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25594665 aattaggggaagatagatgattcgaaagacctgatctcatctctct 25594620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21279779 - 21279723
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||    
T  21279779 ccaattaggggaacatcgatgattcgaaagacccgatcacatctctctctcattctt 21279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 5538657 - 5538543
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    |||||| |||| |||||||||||||| || ||||| ||||||||| ||||||||||||||| |||  ||||  |  ||||| ||||||||||  | ||||    
T  5538657 aaaatattttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcatggatacgaacttattttattacttcgatacattttta 5538558  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  5538557 gtacacttgctaaaa 5538543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 21279613 - 21279558
Alignment:
Q  163 aattgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtat 217  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  21279613 aattgagattaaaaacagtccttgtgggaacgatatttttactacttcgatagtat 21279558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 17931272 - 17931326
Alignment:
Q  176 acagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||    
T  17931272 acagtccttgtgggaacaatatttttactacttcgatagtttttggtacacttgc 17931326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30785029 - 30785079
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctt 51  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||    
T  30785029 ccaattaggggaacttagaggattcgaaagacctgatctcacctctctctt 30785079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 33419767 - 33419821
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||| |||||    
T  33419767 aattaggggaacataaatgattcgaaagacctaaactcatctctctcttcttctt 33419821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17931090 - 17931147
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||| || ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  17931090 ccaattacggaaacatcgatgattcgaaagacctaatctcatctctctcttgttcttt 17931147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 33419944 - 33419997
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||| |||| ||| |||||||||||||||||||||||||| ||||||||||    
T  33419944 cagtccttgtggaaacaatatttttactacttcgatagtatttggtacacttgc 33419997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 23619210 - 23619139
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| |||| ||| |||||||||||||||||||||||||| |||||||||| ||||    
T  23619210 attgagattaaaaccagtccttgtgg-aacaatatttttactacttcgatagtatttggtacacttgccaaaa 23619139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5613727 - 5613680
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  5613727 ccaattaggggaa-acagaggattcgaaagacctgatctcatctctctc 5613680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12583117 - 12583167
Alignment:
Q  1 ccaattaggggaacatagat---gattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||   ||||||||||||||| ||||||||||||    
T  12583117 ccaattaggggaacatagatcatgattcgaaagacctggtctcatctctct 12583167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 23612413 - 23612485
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || || ||| ||||||||   |||||||||||||||||||||||| |||||||||| ||||    
T  23612413 attgagattaaaaccagcccttgtgggaacatgatttttactacttcgatagtatttggtacacttgccaaaa 23612485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 41836297 - 41836265
Alignment:
Q  152 ccttattgctaaattgagattaacacagtcctc 184  Q
    |||||||||||||||||||||||||||||||||    
T  41836297 ccttattgctaaattgagattaacacagtcctc 41836265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 5253334 - 5253373
Alignment:
Q  180 tcctcgtgggaacgatatttttactacttcgatagtattt 219  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  5253334 tccttgtgggaacgatatttttactacttcgatagaattt 5253373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2560662 - 2560718
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||| | ||||| ||||| | ||||||||||| ||||| ||||||||||||||    
T  2560662 ccaattagagaaacatcgatgacttgaaagacctgacctcatttctctcttattctt 2560718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 10664194 - 10664166
Alignment:
Q  142 taaatattaaccttattgctaaattgaga 170  Q
    |||||||||||||||||||||||||||||    
T  10664194 taaatattaaccttattgctaaattgaga 10664166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 12516281 - 12516226
Alignment:
Q  176 acagtcctcgtgggaacgatatt--tttactacttcgatagtatttagtacacttg 229  Q
    |||||||| ||||||||||||||  ||||| ||||||||||| ||| |||||||||    
T  12516281 acagtccttgtgggaacgatattattttacaacttcgatagtttttggtacacttg 12516226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 13197135 - 13197198
Alignment:
Q  165 ttgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacactt 228  Q
    |||||||||| | ||||| |||||||||||||| |||||||||||||||| | ||| ||||||||    
T  13197135 ttgagattaaaagcagtcttcgtgggaacgata-ttttactacttcgataatttttggtacactt 13197198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 45287084 - 45286848
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45287084 ccaattagggaaacatagatgattcgaaagacctaatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttatgcaaa 45286985  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||| | | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  45286984 ccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatt 45286885  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  45286884 tttactacttcgatagtatttagtacacttgctaaaa 45286848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 45290495 - 45290259
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45290495 ccaattaggggaacatagatgattcgaaagacctaatctcatctctctcttattctttccaactctatctttattttctgtttatttaattttatgcaaa 45290396  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||| | | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  45290395 ccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgttggaacgatatt 45290296  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45290295 tttactactacgatagtatttagtacacttgctaaaa 45290259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37415438 - 37415206
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37415438 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttacattctgtttatttaattttatgcaaa 37415339  T
Q  101 ccaaaactactgcctca--gacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    |||||||||||| ||||  |  |||||||  |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37415338 ccaaaactactg-ctcagggcaactaaaagaaatttatacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 37415240  T
Q  198 ttttactacttcgatagtatttagtacacttgct 231  Q
    ||||||||||||||||||||||||||||||||||    
T  37415239 ttttactacttcgatagtatttagtacacttgct 37415206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 23224920 - 23224675
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23224920 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctcattctttccaactctatctttacattctgtttatttaattttatgcaaa 23224821  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  23224820 ccaaaactactgcctagggcaactaaaagaaatttatacatcctaattatttaccttattgctaaattgaaattaacacagtcctcgtgggagcgatatt 23224721  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  23224720 tttactacttcgatagtatttagtacacttgctaaaatatctatca 23224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 6603558 - 6603800
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| | || |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  6603558 ccaattaggggaacatcgatgattcgaaagacttgatctcatctttgtccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 6603655  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| |||||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6603656 tc-aaaactactgcctcggacactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatatt 6603754  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  6603755 tttactacttcgatagtatttggtacacttgccaaaatatctatca 6603800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 44017702 - 44017561
Alignment:
Q  89 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  44017702 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 44017603  T
Q  189 gaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  44017602 gaacgatatttttactacttcgatagttattggtacacttgc 44017561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 16165848 - 16166082
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  16165848 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 16165945  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
     |||||  |||||||||| | |||||||| || ||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  16165946 caccaat-ctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgataaattgagattaacacagtccttgtgggaacgatat 16166044  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  16166045 ttttactacttcgatagtatttggtacacttgccaaaa 16166082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 13449791 - 13449551
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||||| |  ||||| ||||  |||||||||| ||||||||||||||||||||||||    
T  13449791 ccaattaggggaccatcgatgattcgaaagacctgttctcatctctctccttgtcttttccaaaactatctttattttctgtttatttaattttatgcaa 13449692  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
     | ||| | |   |  || |||   |||| ||||| |||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13449691 tc-aaatcaaaatctacaaaca---aaattatttatacatcctaaatatttactttactgctaaattgagattaacatagtcctcgtgggaacgatattt 13449596  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  13449595 ttactacttcgatagtatttggtacacttgctaaaatatctatca 13449551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 4543029 - 4543140
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4543029 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 4543128  T
Q  224 cacttgctaaaa 235  Q
    ||||||||||||    
T  4543129 cacttgctaaaa 4543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 4547101 - 4547212
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4547101 aaaataatttatacatcctaaatatttactttattgctaaactgagattaacacagtcctcgtgggaacaatatttttactacttcgatagtatttagta 4547200  T
Q  224 cacttgctaaaa 235  Q
    ||||||||||||    
T  4547201 cacttgctaaaa 4547212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 8277219 - 8277331
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  8277219 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatatttttactacttcgatagtatttggta 8277318  T
Q  224 cacttgctaaaat 236  Q
    ||||||| |||||    
T  8277319 cacttgccaaaat 8277331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 11919746 - 11919623
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata---tttttactacttcgatagtattta 220  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||| ||||||||||||||||| |||   ||||||||||||||||||||||||    
T  11919746 aaaataatttatacatcctaaatatttactttatttctaaattgagattaatacagtcctcgtgggaactatattttttttactacttcgatagtattta 11919647  T
Q  221 gtacacttgctaaaatatccatca 244  Q
    ||| ||||||||||||||| ||||    
T  11919646 gtagacttgctaaaatatctatca 11919623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 244
Target Start/End: Complemental strand, 22232533 - 22232395
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    |||||||||||| |||| | | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  22232533 ctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 22232434  T
Q  205 acttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  22232433 acttcgatagt-tttagtacacttgctaaaatatctatca 22232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 244
Target Start/End: Original strand, 22254206 - 22254344
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    |||||||||||| |||| | | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||  |  ||||| |    
T  22254206 ctactgcctcaggcacttataaaatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaacttattttatt 22254305  T
Q  205 acttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  22254306 acttcgatagt-tttagtacacttgctaaaatatctatca 22254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 11398064 - 11397828
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  11398064 ccaattaggggaacatcgatgaatcgaaagacctaatctcatctctctcattgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 11397967  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---t 195  Q
     ||||   |||||||||| | |||||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||   |    
T  11397966 caccatc-ctactgcctcgggcactaaga-aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactt 11397869  T
Q  196 atttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    | ||||| |||||||||   | |||||||||||||||||||    
T  11397868 aattttattacttcgatgcatttttagtacacttgctaaaa 11397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 5826620 - 5826477
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| ||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  | ||  |  ||    
T  5826620 caaacctactgcctcaggcacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggataagaacttatt 5826521  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  5826520 ttattacttcgatagt-tttagtacacttgctaaaatatctatca 5826477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 11825267 - 11825130
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  11825267 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 11825168  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  11825167 ttattacttcgatagt-tttagtacacttgctaaaatat 11825130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 8398037 - 8398171
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  8398037 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 8398136  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  8398137 ttattacttcgatagt-tttagtacacttgctaaaa 8398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2441293 - 2441081
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttat-gca 98  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||  |||||||||| ||||||| ||||| |||||| |||    
T  2441293 ccaattaggagaacatcgatgattcgaaagacctgatctcatctctctccttatt-tttccaaaactatctttattttctgtt-atttacttttattgca 2441196  T
Q  99 aaccaa---aactactgcctca-gacact----aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtggga 190  Q
    | | ||   | | |||||||   | || |    || | |||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  2441195 atcaaaccaatcaactgcctagtggcaatttaaaagaaaatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggga 2441096  T
Q  191 acgatatttttacta 205  Q
    |||||||||||||||    
T  2441095 acgatatttttacta 2441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 5242165 - 5241995
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctctt-attctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||| ||||||  ||| ||||||||||||||||||||||||||||||| ||| || ||||  |||||||||| || ||||||||||||||| |||||    
T  5242165 ccaattaagggaactcagaagattcgaaagacctgatctcatctctctctttatttttgccaaaactatctttattttatgtttatttaattttgtgcaa 5242066  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
     | ||          ||   ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  5242065 tcaaa----------tcg--caccaaaataatttacacatcctagatagtaaccttattgctaaattgagattaacacagtcc 5241995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 5796760 - 5796885
Alignment:
Q  111 tgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactact 207  Q
    ||||| ||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||  ||||   |||||||| ||||    
T  5796760 tgccttagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttatttttattact 5796859  T
Q  208 tcgatagtatttagtacacttgctaaa 234  Q
    |||||||| ||||||||||||||||||    
T  5796860 tcgatagt-tttagtacacttgctaaa 5796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 26153371 - 26153505
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||  |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  26153371 caaacctactgcctcatgcacttataaaatttacacatcctatatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 26153470  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  26153471 ttattacttcgatagt-tttagtacacttgctaaaa 26153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 26557731 - 26557854
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  | ||  |  ||||| |||||||||| || ||||    
T  26557731 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaacttattttattacttcgatacgttttta 26557830  T
Q  221 gtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||| ||||    
T  26557831 gtacacttgctaaaatatctatca 26557854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 48645573 - 48645763
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatg---- 96  Q
    |||||||||||||||| |||||||||||||| ||  ||||||||||| | |||  |||||||   ||||||||| ||||||| ||||| ||||||         
T  48645573 ccaattaggggaacatcgatgattcgaaagatctagtctcatctctc-catatattttccaaacatatctttattttctgtt-atttacttttattgcaa 48645670  T
Q  97 -caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
     |||| |||| | |||||||||| ||  |||||| |||| |||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  48645671 tcaaatcaaatcaactgcctcaggcatcaaaatattttatacatcctaaatatttactttattgctaaattgaaattaacacagtcctcgtgg 48645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10345294 - 10345523
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||   ||  | |||||||| |||||  |  ||| |||||||||||    
T  10345294 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt--aaaaccaatctttattttctg--tcattacttttatgcaaa 10345389  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatt 198  Q
     |||| | | | |  || ||   ||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||  ||||  |  |    
T  10345390 -caaatcaaat-ctacaaac---aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttat 10345484  T
Q  199 tttactacttcgata-gtatttagtacacttgctaaaat 236  Q
    |||| ||||||||||  | ||||||||||||||||||||    
T  10345485 tttattacttcgatacatttttagtacacttgctaaaat 10345523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 35961332 - 35961455
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  35961332 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttta 35961431  T
Q  221 gtacacttgctaaaatatccatca 244  Q
    |||||||| |||||||||| ||||    
T  35961432 gtacactttctaaaatatctatca 35961455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 8258105 - 8258239
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||| |||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| |  ||||  |  ||    
T  8258105 caaacctactacctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtagatacgaacttatt 8258204  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| ||||||||||||| |||||    
T  8258205 ttattacttcgatagt-tttagtacacttgttaaaa 8258239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14683459 - 14683403
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14683459 ccaattaggggaacatagatgattcgaaagacctgatctcatctctcttttattctt 14683403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 4595891 - 4595828
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  4595891 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtg 4595828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 22257470 - 22257580
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat--ttttact 204  Q
    |||||||||||| |||| | | |||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||  ||||| |  ||||| |    
T  22257470 ctactgcctcaggcacttataaaatttacacatcttagatattaaccttattgttaagttgagattaacacagtcctcgtggatacgatcttattttatt 22257569  T
Q  205 acttcgatagt 215  Q
    |||||||||||    
T  22257570 acttcgatagt 22257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26136143 - 26136086
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  26136143 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 26136086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26144523 - 26144466
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  26144523 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 26144466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 4695713 - 4695777
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || ||||||||||||| |||||||||||||||||||||    
T  4695713 aaaataatttatacatcctaaatatttactttattgctaaatttagattaacacagtcctcgtgg 4695777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 9864625 - 9864565
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 184  Q
    |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  9864625 aaaataatttacacatcctaaatatttactttatttctaaattgagattaacacagtcctc 9864565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 13842904 - 13842979
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaatatc 239  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  13842904 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagt-tttggtacacttgctaaaatatc 13842979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4596024 - 4595977
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4596024 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 4595977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11919880 - 11919833
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11919880 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 11919833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20594362 - 20594409
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20594362 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 20594409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9132775 - 9132720
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  9132775 ccaattaggggaacatagatgattcgaaagacct-aactcatctctctcttattctt 9132720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13842739 - 13842795
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  13842739 ccaattacgggaatatcgatgattcgaaagacctgatctcatctctctcttattctt 13842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20080733 - 20080677
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  20080733 ccaattaggggaacatagatgattcgaaagacttaaactcatctctctcttattctt 20080677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 3067991 - 3067936
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  3067991 caattaggggaacatagatgattcgaaagacctaaactcatgtctctcttattctt 3067936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4542896 - 4542943
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4542896 ccaattaggggaacatagatgattcggaagacctgatctcatctctct 4542943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8277085 - 8277132
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8277085 ccaattaggggaacatagatgcttcgaaagacctgatctcatctctct 8277132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 20080566 - 20080499
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20080566 attgagattaaaatcagtcattgtgggaacgatatttttactacttcgatagtatttggtacacttgc 20080499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 22611615 - 22611552
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||||||||||| ||||||||||    
T  22611615 aaaataatttatacatcctaaatatttactatattgctaaattgagattaacaaagtcctcgtg 22611552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 10469245 - 10469299
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  10469245 aattaggggaacatagatgattcgaaagatctaaactcatctctctcttattctt 10469299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 13907670 - 13907578
Alignment:
Q  145 atattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||||||||||||||||||||||||||||||||||| |||   | ||   ||||||||  ||||| ||||| ||||||||||||||||||    
T  13907670 atattaaccttattgctaaattgagattaacacagtccttgtgcatatgaacttatttttatcacttctatagtttttagtacacttgctaaa 13907578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 26135978 - 26135906
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  26135978 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 26135906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37166162 - 37166105
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||    
T  37166162 ccaattaggggaacataaatgattcgaaagacctaaattcatctctctcttattcttt 37166105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 9132596 - 9132544
Alignment:
Q  178 agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  9132596 agtccttgtgggaacgatatttttactactttgatagtatttggtacacttgc 9132544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 10469410 - 10469466
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 219  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  10469410 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtattt 10469466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 14683290 - 14683223
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||| ||||||||||    
T  14683290 attgagattaaaatcagtccttgtgggaacgatatttttagtacttcgatggtatttggtacacttgc 14683223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17730913 - 17730960
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||    
T  17730913 ccaattagggaaacatagatgattcgaaagacatgatctcatctctct 17730960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26557598 - 26557645
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  26557598 ccaattagggaaacatagatgactcgaaagacctgatctcatctctct 26557645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 3067825 - 3067759
Alignment:
Q  164 attgagattaacacag-tcctcgtgggaacgatatttttactacttcgatagtatttagtacacttg 229  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  3067825 attgagattaaaacaaatccttgtgggaacgatatttttactacttcgatagtatttggtatacttg 3067759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 4546969 - 4547015
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  4546969 caattagggaaacatagatgattcgaaagacctgatctcatccctct 4547015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 37165983 - 37165925
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||  ||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  37165983 cagtccttatggaaacgatatttttactacttcgatagtatttggtacacttgccaaaa 37165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4695580 - 4695625
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 46  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4695580 ccaattaggggaatatagatgattcgaaagacctggtctcatctct 4695625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 17731064 - 17731168
Alignment:
Q  136 acatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgat-agtatttagtacacttgcta 232  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||| ||||  ||||  |  ||||| |||||||||   | ||||||||||||||||    
T  17731064 acatcctaaatattcactttattgctaaactgagattaacacagtccttgtggatacgaacttattttattacttcgatgcatttttagtacacttgcta 17731163  T
Q  233 aaata 237  Q
    |||||    
T  17731164 aaata 17731168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9271480 - 9271433
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  9271480 ccaattaggggaacatagatgattctaaatacctgttctcatctctct 9271433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9864741 - 9864694
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  9864741 ccaattagggatacatagatgatttgaaagacctgatctcatctctct 9864694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 23776170 - 23776242
Alignment:
Q  165 ttgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||||||||||||||| | |||||   |||||||| |||||||||||| ||||||| |||||||||||    
T  23776170 ttgagattaacacagtcctcgtagaaacgaacttatttttattacttcgatagt-tttagtatacttgctaaaa 23776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 18560857 - 18560817
Alignment:
Q  204 tacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  18560857 tacttcgatagtttttagtacacttgctaaaatatctatca 18560817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 20595970 - 20595919
Alignment:
Q  185 gtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||| ||||||||||||| ||||||||||  ||||||||| |||||    
T  20595970 gtgggaacgaaatttttactacttagatagtatttgatacacttgccaaaat 20595919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 23467059 - 23467014
Alignment:
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  23467059 ttttattacttcgatagt-tttagtacacttgctaaaatatctatca 23467014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 709856 - 709796
Alignment:
Q  170 attaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatttagtacacttgc 230  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||  || ||||||||||    
T  709856 attaatacagtcctcgtgg-aacgatatttattactacttcgatagttattggtacacttgc 709796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 37415205 - 37415168
Alignment:
Q  207 ttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  37415205 ttcgatagtatttagtacacttgctagaatatctatca 37415168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 5747502 - 5747422
Alignment:
Q  155 tattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||| |||||  ||||| ||||||||||||  ||||   ||||| |||||| ||||| ||||||||| |||||||||    
T  5747502 tattgctatattgaagttaacgcagtcctcgtggatacgaacattttattacttcaatagtttttagtacatttgctaaaa 5747422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 20100917 - 20100984
Alignment:
Q  163 aattgagattaacacagtcctcgtgggaacgatattt-ttactacttcgatagtatttagtacacttgc 230  Q
    |||||| ||||| |||||||| |||| |||||||||| ||||||||||||||||  || ||||||||||    
T  20100917 aattgaaattaatacagtccttgtgg-aacgatatttattactacttcgatagttattggtacacttgc 20100984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 5408 - 5166
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  5408 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct--tattcttttccaaaactatctttatattttgtttatttaattttatgcaa 5311  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  5310 accaaaactactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggtaacgatattt 5211  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  5210 ttactacttcgatggtatttagtgcacttgctaaaaaatctatca 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26752711 - 26752477
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26752711 ccaattaggggaacataaatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgc-aa 26752613  T
Q  101 ccaaaactactgcctcagacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
     |||||| ||| |||| | ||||||||  |||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  26752612 tcaaaaccactacctcgggcactaaaagaaatttacacatcttagatattaacgttattgctaaattgagattaacacagtactcgtggggacgatattt 26752513  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||||||||||||||||    
T  26752512 ttactacttcgatagtatttagtacacttgctaaaa 26752477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 2 - 235
Target Start/End: Original strand, 31863828 - 31864062
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaac 101  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31863828 caattaggggaacatagatgattcgaaagacctagtctcatctctctcttattctttccaactctatctttatattatgtttatttaattttatgcaaac 31863927  T
Q  102 caaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    ||||||||| ||||  | | |||||||  |||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  31863928 caaaactac-gcctagggcaactaaaagaaatttatacatcctaaatatttactttattgctaaattgagattaactcagtcctcgtgggaacgatattt 31864026  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    |||||||||| |||||||||||||||||||||||||    
T  31864027 ttactacttcaatagtatttagtacacttgctaaaa 31864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 41306537 - 41306291
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||| ||||   ||||||||| ||||||||||||||||||||||||    
T  41306537 ccaattaggggaacatagatgattcgaaagacccgatcttatctctctctttatcttttccaaaattatctttattttctgtttatttaattttatgcaa 41306438  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||  |||||||||||  |||||||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41306437 accaac-ctactgcctcacgcactaaaagaaattttcacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 41306339  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  41306338 tttactacttcgatagtatttagtgcacttgctaaaaaatctatcagt 41306291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 37215164 - 37215396
Alignment:
Q  9 gggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaact 108  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37215164 gggaacttagatgattcgaaagacctaatttcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaact 37215263  T
Q  109 actgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactac 206  Q
    |||||||  | | |||||||  ||||||||||||||||||||| || |||||     |||||||||||||||||||||||||||||||||||||||||||    
T  37215264 actgcctagggcaactaaaagaaatttacacatcctaaatatttacgttatt-----attgagattaacacagtcctcgtgggaacgatatttttactac 37215358  T
Q  207 ttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||| ||||||||||||||||||||||| ||| ||||    
T  37215359 ttcgacagtatttagtacacttgctaaaaaatctatca 37215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 32838007 - 32838229
Alignment:
Q  19 atgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctca 117  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  32838007 atgattcgaaagacctgatctcatctctct--tattcttttccaaaactatatttatattctgtttatttaattttatgcaaaccaaaactactgcttca 32838104  T
Q  118 gacactaaaata---atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgata- 213  Q
    | ||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  32838105 ggcactaaaataataatttacacatcctaaatattaaccttattgataaattgagattaacacagtcctcgtggaaacgatatttttattacttcgatac 32838204  T
Q  214 gtatttagtacacttgctaaaatat 238  Q
     | ||||||||||||||||||||||    
T  32838205 atttttagtacacttgctaaaatat 32838229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 43491871 - 43492116
Alignment:
Q  4 attaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaacc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||| ||||||||||||||||||| |     
T  43491871 attaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttttccaaaactatctttattttctatttatttaattttatgcaatc- 43491969  T
Q  103 aaaactactgcctcagacact-aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattttt 201  Q
    |||||||||| ||  | ||   ||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  43491970 aaaactactgtctagggcaaacaaaataatttatacatcctaaatatttactttattgctaaattgagattaacacggtccttgtgggaacgatattttt 43492069  T
Q  202 actacttcgatagtatttagtacacttgctaaaatatccatcagttg 248  Q
    |||||||||||||||||||||||| |||||||||  || ||||||||    
T  43492070 actacttcgatagtatttagtacatttgctaaaaattctatcagttg 43492116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 40916155 - 40915931
Alignment:
Q  15 atagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactact 111  Q
    |||||||| | |||||||||||||||||||||||||   |||  |||||||   ||||||||| ||| |||||||||||||||||||||||||||||| |    
T  40916155 atagatgacttgaaagacctgatctcatctctctctctttatcttttccaaaattatctttattttc-gtttatttaattttatgcaaaccaaaactatt 40916057  T
Q  112 gcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcga 211  Q
    | ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||    
T  40916056 gtctccggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctaaagggaatgatatttttactacttcga 40915957  T
Q  212 tagtatttagtacacttgctaaaata 237  Q
    ||||||||||||||||||||||||||    
T  40915956 tagtatttagtacacttgctaaaata 40915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14016148 - 14015906
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| |||||| |||||||||    
T  14016148 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttaaatttatgcaa 14016051  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
     | |||||||||||||| | |||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14016050 tc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggaaacgatatt 14015952  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||| |||| |||||||||| |||| ||| ||||    
T  14015951 tttactacttcgataggatttggtacacttgccaaaaaatctatca 14015906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 22936947 - 22936707
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatatt-ctgtttatttaattttatgca 98  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| || |||||||||||||||||||||    
T  22936947 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttatttttctgtttatttaattttatgca 22936848  T
Q  99 aaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    | | ||| | | | |  || |||   ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22936847 atc-aaatcaaat-ctacaaaca---aaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacgatatt 22936753  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22936752 tttactacttcgatagtatttagtacacttgctaaaatatctatca 22936707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 41876641 - 41876521
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 223  Q
    ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876641 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagta 41876542  T
Q  224 cacttgctaaaatatccatca 244  Q
    |||||||||||| ||| ||||    
T  41876541 cacttgctaaaaaatctatca 41876521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21332690 - 21332448
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt-ctttccaactctatctttatattctgtttatttaattttat---- 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||| ||||||| ||||||        
T  21332690 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcctttccaaaactatctttattttctg-ttatttacttttattgca 21332592  T
Q  96 -gcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga 194  Q
      |||| |||| | |||||||| | ||  |||||| ||||  ||| ||||||||| || ||||||||||||||| |||||||||||||||||||  ||||    
T  21332591 atcaaatcaaatcaactgcctcgggcatcaaaatattttattcattctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacga 21332492  T
Q  195 --tatttttactacttcgata-gtatttagtacacttgctaaaa 235  Q
      |  ||||| ||||||||||  | |||||||||||||||||||    
T  21332491 acttattttattacttcgatacatttttagtacacttgctaaaa 21332448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7625215 - 7625453
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaatttt-atgca 98  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| |  ||||| ||||  ||||||| || ||||||| ||||| |||| |||||    
T  7625215 ccaattaggggaacatcgatgatttgaaagacctgatctcatctctctccttgtcttttccaaaactatctt-attttctgtt-atttactttttatgca 7625312  T
Q  99 aaccaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--- 194  Q
    | | |||||||||||||| | |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||       
T  7625313 atc-aaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaact 7625411  T
Q  195 tatttttactacttcgat-agtatttagtacacttgctaaaa 235  Q
    |  |||||||||||||||   | |||||||||||||||||||    
T  7625412 ttattttactacttcgatgcatttttagtacacttgctaaaa 7625453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 42063172 - 42063289
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagta--tttagtacactt 228  Q
    |||| ||||| |||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  42063172 tttatacatcttaaatatttactttattgctgaattgagattaacatagtcctcgtgggaacgatatttttactacttcgatagtatttttagtacactt 42063271  T
Q  229 gctaaaatatccatcagt 246  Q
    ||||||| ||| ||||||    
T  42063272 gctaaaaaatctatcagt 42063289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 239
Target Start/End: Original strand, 19686388 - 19686526
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  19686388 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 19686487  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatc 239  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  19686488 ttactacttcgatagt-tttagtacacttgctaaaatatc 19686526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 34832009 - 34832131
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata-tttttactacttcgata-gtatttag 221  Q
    ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||| || |||||    
T  34832009 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatattttttattacttcgatacgtttttag 34832108  T
Q  222 tacacttgctaaaatatccatca 244  Q
    ||||||||||||| |||| ||||    
T  34832109 tacacttgctaaagtatctatca 34832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 3195299 - 3195436
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  3195299 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 3195398  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  3195399 ttattacttcgatagt-tttagtacacttgctaaaatat 3195436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 21335706 - 21335517
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttatt-ctttccaactctatctttatattctgtttatttaattttat-----g 96  Q
    |||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||||| || || ||||||| ||||||          
T  21335706 aattaggggaacatagatgattcgaaagacttggtctcatctctcgcttattcctttccaaaactatctttattttatg-ttatttacttttattgcaat 21335608  T
Q  97 caaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| |||| | |||||||| | || ||||||| |||| |||| ||||||||| || ||||||||||||||| |||||||||||||||||||    
T  21335607 caaatcaaatcaactgcctcgggca-taaaatattttatacattctaaatatttactttattgctaaattgaaattaacacagtcctcgtgg 21335517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 30764443 - 30764580
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  30764443 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 30764542  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  30764543 ttattacttcgatagt-tttagtacacttgctaaaatat 30764580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 19689771 - 19689915
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||| ||||||||||| |||||||| |||||||||| |||||||||||||||| |||||||  ||||  |  ||    
T  19689771 caaacctactgcctcaggcacttataaaatctacacatcctagatattaactttattgctaagttgagattaacacagtgctcgtggatacgaacttatt 19689870  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||    
T  19689871 ttactacttcgatagt-tttagtacacttgctaaaatatctatcag 19689915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 18239505 - 18239336
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||||||||||  ||| ||||||||||||||| ||||||||           |||||||  |||||||||| |||||||||||| |||||||||||     
T  18239505 ccaattaggggaactcagaggattcgaaagacctgttctcatct-----------tttccaaaactatctttattttctgtttatttcattttatgcaat 18239417  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
    | ||| ||||||||| || ||| |||||||||||||||||||| | | |||||||||||||| ||||||||||||| |||||    
T  18239416 c-aaatctactgccttaggcaccaaaataatttacacatcctagacagtaaccttattgctagattgagattaacatagtcc 18239336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 30761624 - 30761761
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||||||||| | | ||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||  ||||  |  ||    
T  30761624 caaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgttaagttgagattaacacagtcctcgtggatacgaacttatt 30761723  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatat 238  Q
    ||| |||||||||||| ||||||||||||||| ||||||    
T  30761724 ttattacttcgatagt-tttagtacacttgctgaaatat 30761761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 34652668 - 34652523
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||| ||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  || |  |  ||    
T  34652668 caaacctactgtctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttatt 34652569  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  34652568 ttattacttcgatagt-tttagtacacttgctaaaatatctatcagt 34652523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 10629407 - 10629555
Alignment:
Q  82 ttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    |||||||||||||||||| | ||| ||||||||| || || ||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  10629407 ttatttaattttatgcaatc-aaatctactgccttaggcattaaaataatttacacatcctaaataataattttattgttaaattgagattaacacagtc 10629505  T
Q  182 ctcgtgggaacga--tatttttactacttcgatagtatttagtacacttg 229  Q
    ||| |||  || |  |  ||||| |||||||||||||||| |||||||||    
T  10629506 ctcatggatacaaacttattttattacttcgatagtatttggtacacttg 10629555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 28562273 - 28562129
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatt 198  Q
    |||| |||||||||||| |||| | | | ||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||  ||||   || |    
T  28562273 caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaaccta-t 28562175  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcag 245  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||    
T  28562174 tttattacttcgatagt-tttagtacacttgctaaaatatctatcag 28562129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 2453505 - 2453634
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    |||||||||||| |||| | | |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||  || |  |  ||||| |    
T  2453505 ctactgcctcaggcacttataaaatttacatatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttattttatt 2453604  T
Q  205 acttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| |||||||||||||||||||    
T  2453605 acttcgatagt-tttagtacacttgctaaaa 2453634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 28565841 - 28565698
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatt 198  Q
    |||| |||||||||||| |||| | | | ||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||||  ||||   || |    
T  28565841 caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaaccta-t 28565743  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||    
T  28565742 tttattacttcgatagt-tttagtacacttgctaaaatatctatca 28565698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 26548298 - 26548441
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | | ||||||||||||| ||| |||| |||||||||| || |||||||||||||||||||||  ||||  |  ||    
T  26548298 caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttatt 26548397  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  26548398 ttattacttcgatagt-tttagtacacttgctaaaatatctatca 26548441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 26551857 - 26552000
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | | ||||||||||||| ||| |||| |||||||||| || |||||||||||||||||||||  ||||  |  ||    
T  26551857 caaacctactgcctcaggcacttataaagtttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttatt 26551956  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| ||||||||||||||||||||||| ||||    
T  26551957 ttattacttcgatagt-tttagtacacttgctaaaatatctatca 26552000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26895614 - 26895559
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattct 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26895614 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattct 26895559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 30066556 - 30066620
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  30066556 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 30066620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 7271263 - 7271377
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  7271263 aaaataatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttta 7271362  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  7271363 gtacacttgctaaaa 7271377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12058502 - 12058445
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  12058502 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 12058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20055886 - 20055943
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  20055886 ccaattaggggaacatagatgattcgaaagacctcatctcatatctctcttattcttt 20055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 26907261 - 26907194
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  26907261 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggtacacttgc 26907194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 28787207 - 28787093
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 220  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||  ||||  |  ||||| ||||||||||  | ||||    
T  28787207 aaaataatttatacatcctaaatatttactttattgctaaattgagactaacacggtcctcgtggatacgaacttattttattacttcgatacattttta 28787108  T
Q  221 gtacacttgctaaaa 235  Q
    |||||||||||||||    
T  28787107 gtacacttgctaaaa 28787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41876774 - 41876727
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876774 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 41876727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 28441420 - 28441314
Alignment:
Q  44 tctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcct 142  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||| |||| | ||| |||| | ||  |||||| |||| |||||||    
T  28441420 tctctcttattcttttccaaaactatatttatattctgtttatttaattttatgcaaatcaaatcaactccctcgggcatcaaaatattttatacatcct 28441321  T
Q  143 aaatatt 149  Q
    |||||||    
T  28441320 aaatatt 28441314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18952805 - 18952862
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  18952805 ccaattaggggaacatagatgatttgaaagatttgatctcatctctctcttattcttt 18952862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23044254 - 23044311
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  23044254 ccaattaggggaacatagatgattcaaaagacctaaactcatctctctcttattcttt 23044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30066421 - 30066466
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30066421 ccaattaggggaacatagatgattcgaaagacctgatctcatctct 30066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 4099413 - 4099349
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| | |||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  4099413 aaaataatttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtgg 4099349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12088070 - 12088126
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  12088070 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttagtctt 12088126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17664663 - 17664719
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  17664663 ccaattaggggaacatagataattcaaaagacctgatctcatctctcttttattctt 17664719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22131342 - 22131390
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22131342 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctctc 22131390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 33552366 - 33552430
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||    
T  33552366 aaaataatttatacatcctaaatatttactctattgttaaattgagattaacacagtcctcgtgg 33552430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34132993 - 34132937
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  34132993 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttagtctt 34132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34143224 - 34143168
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  34143224 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttagtctt 34143168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7271128 - 7271175
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  7271128 ccaattaggggaacatagatgattcgaaagacctgatctcatttctct 7271175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 23044420 - 23044487
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  23044420 attgagattaaaatcagtccttatgggaacgatatttttactacttcgatagtatttggtacacttgc 23044487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33552233 - 33552280
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33552233 ccaattaggggaacatagatgattcgaaagacctgatctcatcactct 33552280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26907465 - 26907416
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  26907465 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 26907416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 34132828 - 34132756
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  34132828 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 34132756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 34143059 - 34142987
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||    
T  34143059 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaat 34142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 35049815 - 35049762
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  35049815 cagtccttatgggaacgatatttttactacttcgatagtatttggtacacttgc 35049762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 12088259 - 12088307
Alignment:
Q  188 ggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  12088259 ggaacgatatttttactacttcgatagtatttggtacacttgccaaaat 12088307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17748552 - 17748608
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||| |||| || | ||||||||||||||||||||    
T  17748552 ccaattaggggaacatagatgattcggaagatctaaactcatctctctcttattctt 17748608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11959188 - 11959141
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||    
T  11959188 ccaattaggggaacatagatgattcgaaagacctaaactcatctctct 11959141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 39192575 - 39192638
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    ||||||||||| |||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  39192575 aaaataatttatacatcctaaatatttaatttattgctaaattgagattaatacagtcttcgtg 39192638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14375805 - 14375715
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaat 90  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||||||  |||||||||| |||||||||||||||    
T  14375805 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttccaaaactatctttattttctgtttatttaat 14375715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 39192443 - 39192489
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  39192443 caattaggggaacattgatgattcgaaagatctgatctcatctctct 39192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4099527 - 4099480
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||    
T  4099527 ccaattaggggaacatagatgattcgaaagacctagtctcatctttct 4099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 17664830 - 17664897
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||||| ||| ||||||||||||||||||||||||| ||||| ||||| ||||    
T  17664830 attgagattaaaatcagtccttgtgagaacgatatttttactacttcgataatatttggtacatttgc 17664897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 20056089 - 20056190
Alignment:
Q  131 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt--tttactacttcgatagtatttagtacactt 228  Q
    ||||||||||||||||| ||||  | ||||    |||||||||| ||||| || |||||||| |||||  ||||||||||||||||| ||| ||||||||    
T  20056089 tttacacatcctaaataataacgcttttgcatttttgagattaaaacagttcttgtgggaacaatattattttactacttcgatagtttttggtacactt 20056188  T
Q  229 gc 230  Q
    ||    
T  20056189 gc 20056190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42063034 - 42063127
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttat 95  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||||   |||  |||||||  |||||||||| ||||| ||||||| ||||||    
T  42063034 ccaattagggaaacatagatgattcaaaagacctagtctcatctctcatatatattttccaaaactatctttattttctg-ttatttacttttat 42063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 12058337 - 12058265
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| |||| || ||||||| ||||||||||||||||||||||||| |||| |||||    
T  12058337 attgagattaaaaccagtccttgtgg-aatgatatttctactacttcgatagtatttagtacagttgccaaaat 12058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 11959037 - 11958981
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtattt 219  Q
    ||||||||||| | ||||||| || |||| |||||||||||||||||||||||||||    
T  11959037 attgagattaaaatcagtccttgtaggaatgatatttttactacttcgatagtattt 11958981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 21915322 - 21915471
Alignment:
Q  90 ttttatgcaaaccaaaactactgcctcagacactaaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    ||||||||| | |||| |||||||||| | |||| ||||||  |||||||||||||  |  |||| |||||||| | ||||||||||||| |||||| ||    
T  21915322 ttttatgcacaacaaacctactgcctcgggcactgaaataaactttacacatcctatttcataacgttattgcttacttgagattaacacggtcctcatg 21915421  T
Q  188 ggaacga---tatttttactacttcgatagtatttagtacacttgctaaa 234  Q
      |||||   || || |  |||||| ||||| ||||||||||||||||||    
T  21915422 aaaacgaacttaattgttttacttcaatagtttttagtacacttgctaaa 21915471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26292903 - 26292958
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||| ||| ||||||||||||||| ||||| | ||||||||||||||||||||    
T  26292903 ccaattagaggagcatagatgattcgaa-gacctaaactcatctctctcttattctt 26292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 31575635 - 31575764
Alignment:
Q  108 tactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttac 203  Q
    ||||||||| | |||||||| || |||||| |||||| ||| |||| |||||| | |||||||||||| || ||||| |||| |||||   ||||||||     
T  31575635 tactgcctcgggcactaaaaaaaatttacatatcctagataataacgttattgttcaattgagattaatacggtccttgtggaaacgaacttatttttat 31575734  T
Q  204 tacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||||||  | |||||||||||| ||||    
T  31575735 tacttcgata-aaattagtacacttgttaaa 31575764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40583361 - 40583417
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||| |||||| || |||||||||||||| | ||||||||||| ||||||||    
T  40583361 ccaattaggagaacatcgaggattcgaaagacctaaactcatctctcttttattctt 40583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34831876 - 34831923
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||  ||| |||||||||||||| |||||||||||||    
T  34831876 ccaattaggggaactcagaagattcgaaagacctaatctcatctctct 34831923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 22131523 - 22131561
Alignment:
Q  177 cagtcctcgtgggaacgatatttttactacttcgatagt 215  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  22131523 cagtccttgtggaaacgatatttttactacttcgatagt 22131561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 26293091 - 26293139
Alignment:
Q  186 tgggaacgatatttttactacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||| ||||||||||||||| |||| ||||| ||||||||| ||||    
T  26293091 tgggaacaatatttttactactttgatattatttggtacacttgttaaa 26293139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 3798 - 3549
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3798 ccaattagggtaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttacattctgtttatttaattttatgcaaa 3699  T
Q  101 ccaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatatt 198  Q
    |||||||||||||||  | | |||||||  |||||| ||||| ||| |||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3698 ccaaaactactgcctagggcaactaaaagaaatttatacatcttaattatttaccttattactaaattgagattaacacagtcctcgtgagaacgatatt 3599  T
Q  199 tttactacttcgatagtatttagtacacttgctaaaatatccatcagttg 248  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||| ||||    
T  3598 tttattacttcaatagtatttagtacacttgctaaaatatctatcggttg 3549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 19508 - 19752
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttattta-attttatgcaa 99  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||  ||||||||||    
T  19508 ccaattagaggaacatagatgattcgaaagacctgatctcatctctctctcattctttccaactctatc-ttattttctg-ttatttactttttatgcaa 19605  T
Q  100 accaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
    ||||||||||||||||  | | |||||||  ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  19606 accaaaactactgcctagggcaactaaaagaaatttacgcatcctaaatattaacgttactgctaaattgagattaacacagtcctcgtgggaacgatat 19705  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  19706 ttttactacttcgatagtatttggtacacttgccaaaatatctatca 19752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 297 - 530
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  297 ccaattaggggaacatagatgattcgaaagatctgatctcgtctctct--tattcttttccaaaactatctttatattctgtttatttaattttatgcaa 394  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
    | |||| | |||||||| | ||  |||||| |||  ||||| |||||||| || ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  395 atcaaatcaactgcctcgggcatcaaaatattttttacatcttaaatatttactttatttctaaattgagattaacacagttctcgtgggaacgatattt 494  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||||||||||||||| ||||||||||||    
T  495 ttactacttcgatagtatttagtgcacttgctaaaa 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 243 - 491
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttattta-attttatgcaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| ||||| |||||||  |||||| |||    
T  243 ccaattaggggaacatagatgattcgaaagacttgatctcatctctctctcattctttccaactctatc-ttattttctg-ttatttactttttatacaa 340  T
Q  100 accaaaactactgcctcagac-actaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgata- 196  Q
    ||||||||||||||||  | | |||||||  ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  341 accaaaactactgcctagggcaactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacgatat 440  T
Q  197 ---tttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
       ||||||||||||| ||||||||| |||||||||| |||||||| ||||    
T  441 ttttttttactacttcaatagtatttggtacacttgccaaaatatctatca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 293135 - 293374
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt-ccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||   ||||||||| |||||||||||||||| ||| |||    
T  293135 ccaattaggggaacatagatgattcgaaagacttgatctcatctctctctttatcttttccaaaattatctttattttctgtttatttaattatatacaa 293234  T
Q  100 accaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatattt 199  Q
     | ||| | | |  ||   | |  ||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  293235 tc-aaatcaaat--ctacaaaa--aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacaatattt 293329  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  293330 ttactacttcgatagtatttagtacacttgctaaaatatctatca 293374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 7722 - 7481
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattc-tttccaactctatctttatattctgtttattta-attttatgca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||  |||||||||| ||||| |||||||  |||||||||    
T  7722 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcctattctttttcaaaactatctttattttctg-ttatttactttttatgca 7624  T
Q  99 aaccaaaactactgcctcagacactaaaa-taatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacgatat 197  Q
     ||| || |||||||||| | ||||||||  |||||| |||||||||||||| || ||||| ||||||||||||||||||||||||| | ||||||| |     
T  7623 cacc-aacctactgcctcgggcactaaaagaaatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcataggaacgaca- 7526  T
Q  198 ttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
      |||||||||||||||||||||||||||||||||||| ||| ||||    
T  7525 --ttactacttcgatagtatttagtacacttgctaaaaaatctatca 7481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 877 - 694
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct---tattctttccaactctatctttatattctgtttatttaattttatgc 97  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||   |||  |||||||  ||| |||||| |||| |||||||||||||||||    
T  877 ccaattaggggaacatagatgattcgaaagacctgatatcatctatctctccttatcttttccaaaactacctttattttctatttatttaattttatgc 778  T
Q  98 aaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 182  Q
    || | ||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  777 aatc-aaaactactgcctcgagcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtcc 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 3292 - 3048
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaa 100  Q
    ||||||| |||||||| ||||| |||||||||||  |||||||||||   |||  |||||||  |||||||||| ||||||||||||||||||||||||     
T  3292 ccaattatgggaacattgatgactcgaaagacctagtctcatctctcatatatattttccaaaactatctttattttctgtttatttaattttatgcaat 3193  T
Q  101 ccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagatt------aacacagtcctcgtgggaacga 194  Q
    | ||| | | |  || | | || ||||||||||| |||||||||||||| ||   |||||||||||||||||      ||||||||||||||||||||||    
T  3192 c-aaatcaaat--ct-ataaac-aaaataatttatacatcctaaatatttactaaattgctaaattgagattgagattaacacagtcctcgtgggaacga 3098  T
Q  195 tatttttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3097 tatttttactacttcgatagtatttagtacacttgctaaaatatctatca 3048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 89882 - 90069
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc-ttattctttccaactctatctttatattctgtttatttaattttatgcaa 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || |  |||||||  ||||||| || |||||||  ||   |||||||||     
T  89882 ccaattaggggaacttagatgattcgaaagacctgatctcatctctctccttgtgttttccaaaactatctt-attttctgttatttgctttttatgcac 89980  T
Q  100 accaaaactactgcctcagacactaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||  |||||||||||| |||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  89981 accaac-ctactgcctcaggcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 90069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19 - 273
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttat-gcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||  |||||||||| ||||||| ||||| |||||| ||||    
T  19 ccaattaggggaacatagatgattcgaaagacctgatctc---tctctctttttctttccaaaactatctttattttctgtt-atttacttttattgcaa 114  T
Q  100 accaa---aactactgcctca-gacact--aaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaa 191  Q
     | ||   | | |||||||   | || |  |||| ||  |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  115 tcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaa 214  T
Q  192 ----cgatatttttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
         ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  215 tgatagatatttttactacttcgatagtatttagtacacttgctaaaaaatctatcagt 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 62629 - 62883
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttat-gcaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||  |||||||||| ||||||| ||||| |||||| ||||    
T  62629 ccaattaggggaacatagatgattcgaaagacctgatctc---tctctctttttctttccaaaactatctttattttctgtt-atttacttttattgcaa 62724  T
Q  100 accaa---aactactgcctca-gacact--aaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaa 191  Q
     | ||   | | |||||||   | || |  |||| ||  |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  62725 tcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgggaa 62824  T
Q  192 ----cgatatttttactacttcgatagtatttagtacacttgctaaaatatccatcagt 246  Q
         ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  62825 tgatagatatttttactacttcgatagtatttagtacacttgctaaaaaatctatcagt 62883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 63974 - 64026
Alignment:
Q  4 attaggggaacatagatgattcgaaagacctgatctcatctctctcttattct 56  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  63974 attaggggaacatagatgattcgaaagacctaaactcatctctctcttattct 64026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 64138 - 64205
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| || |||||| |||||||||||||||||||||||| |||||||||| ||||||||||    
T  64138 attgagattaaaaccagtccttgtgggaacgatatttttactactttgatagtatttggtacacttgc 64205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 1829 - 1690
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tat- 197  Q
    ||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||   |||     
T  1829 caaaactactggctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgtggatacgaacttata 1730  T
Q  198 --ttttactacttcgatagtatttagtacacttgctaaaat 236  Q
      ||||| |||||||||||| ||||||||||||||||||||    
T  1729 aattttattacttcgatagt-tttagtacacttgctaaaat 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 118436 - 118217
Alignment:
Q  21 gattcgaaagacctgatctcatctctctcttattctttccaactctatctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagac 120  Q
    ||||||||||||||||| ||||||||| || ||  ||||||   ||||||| || ||||||| ||||| ||||||||| | ||||  ||||||||| | |    
T  118436 gattcgaaagacctgatatcatctctc-ctcatcttttccagaactatctt-attttctgtt-atttacttttatgcataacaaacatactgcctcgggc 118340  T
Q  121 actaaaataa-tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagta 216  Q
    ||||||| || ||||||||||||| ||| |||| |||||| | |||||||||||||||| |||||||||  ||||   |||||||| ||||||||||||     
T  118339 actaaaagaaatttacacatcctagataataactttattgttgaattgagattaacacaatcctcgtggatacgaacttatttttattacttcgatagtt 118240  T
Q  217 tttagtacacttgctaaaatatc 239  Q
    ||||||||||||| |||||||||    
T  118239 tttagtacacttgttaaaatatc 118217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 99116 - 99007
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtaca 225  Q
    |||||||||||| || ||| |||| ||||||||||||||||||||||||  ||||||| |  ||||   |||||||| |||||||||| | |||||||||    
T  99116 aatttacacatcatagataataactttattgctaaattgagattaacaccatcctcgtagatacgaaattatttttattacttcgataatttttagtaca 99017  T
Q  226 cttgctaaaa 235  Q
    ||||||||||    
T  99016 cttgctaaaa 99007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 92674 - 92781
Alignment:
Q  124 aaaataatttacacatcctaaatattaacctt-attgctaaattgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagt 222  Q
    |||||||||||||||||||||||| ||| ||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||    
T  92674 aaaataatttacacatcctaaataataaactttattgccaagttgagaataacacagtcctcgtgggaacgatatttttactacttcgatagttattggt 92773  T
Q  223 acacttgc 230  Q
    ||||||||    
T  92774 acacttgc 92781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 248630 - 248677
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  248630 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 248677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 248765 - 248829
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| ||||||| |||||| || |||||||||||||||||| ||||||||||||||||    
T  248765 aaaataatttatacatccttaatatttactttattgctaaattgagatcaacacagtcctcgtgg 248829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 48348 - 48182
Alignment:
Q  69 ctttatattctgtttatttaattttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattga 168  Q
    |||||||||| ||||||||| |||||||||| | ||| ||||||||||||| ||| | | ||| ||||||||||   |||||||||||||||||||||||    
T  48348 ctttatattccgtttatttacttttatgcaatc-aaacctactgcctcagaaacttataaaatatacacatcctcgttattaaccttattgctaaattga 48250  T
Q  169 gattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacacttgctaaa 234  Q
    ||||||||||||| ||||||  ||||   ||| |||| |||||| ||||| ||||||||||||||||||    
T  48249 gattaacacagtcatcgtggatacgaacttatatttattacttcaatagt-tttagtacacttgctaaa 48182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 7224 - 7108
Alignment:
Q  130 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga---tatttttactacttcgatagtatttagtacac 226  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||  ||||   |||||||| |||||||||||| ||||||||||    
T  7224 atttacacatcctagatattaactttattgctaagttgagattaacaccgtcctcgtggatacgaacttatttttattacttcgatagt-tttagtacac 7126  T
Q  227 ttgctaaaatatccatca 244  Q
    ||||||||||||| ||||    
T  7125 ttgctaaaatatctatca 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 228857 - 228986
Alignment:
Q  107 ctactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttact 204  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||   ||||  |  ||||| |    
T  228857 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttatt 228956  T
Q  205 acttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| |||||||||||||||||||    
T  228957 acttcgatagt-tttagtacacttgctaaaa 228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 223926 - 224060
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| | |  ||||  |  ||    
T  223926 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttatt 224025  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||||| |||||||||||||||||||    
T  224026 ttattacttcgatagt-tttagtacacttgctaaaa 224060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 13824 - 13967
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||||||||| | | ||||||| ||||||| | |||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  13824 caaacctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 13923  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| | | ||||||||||||||||||| ||||    
T  13924 ttattacttcgatagt-tcttgtacacttgctaaaatatctatca 13967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 27840 - 27983
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| ||||||||||||||||| | | ||||||| ||||||| | |||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  27840 caaacctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 27939  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| |||||||||||| | | ||||||||||||||||||| ||||    
T  27940 ttattacttcgatagt-tcttgtacacttgctaaaatatctatca 27983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 20274 - 20417
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||||||  |||| | | ||||||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||  | ||  |  ||    
T  20274 caaacctactgcctcaagcacttataaaatttacacatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatatgaacttatt 20373  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaatatccatca 244  Q
    ||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  20374 ttattacttcggtagt-tttagtacacttgctaaaatatctatca 20417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 6492 - 6626
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tattt 199  Q
    |||| |||||||| |||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||  |  ||    
T  6492 caaacctactgccacagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttatt 6591  T
Q  200 ttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||| |||||||||| | ||||||||||||| |||||    
T  6592 ttattacttcgata-tttttagtacacttggtaaaa 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 2660 - 2746
Alignment:
Q  102 caaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||| |||||||||||| |||| | | ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||    
T  2660 caaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtccttgtgg 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 10140 - 10287
Alignment:
Q  90 ttttatgcaaaccaaaactactgcctcagacactaaaataa--tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtg 187  Q
    |||||||||||| ||| ||||||||||   |||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||||| | ||||||||||    
T  10140 ttttatgcaaac-aaacctactgcctcgagcactaaaataaactttacacatcctatataataaccatattgctaaattgagattaatagagtcctcgtg 10238  T
Q  188 ggaacga---tatttttactacttcgatagtatttagtacacttgctaaa 234  Q
    | ||| |   |||||||| ||||| |||||| ||||||||||||||||||    
T  10239 gaaacaaacttatttttattactttgatagt-tttagtacacttgctaaa 10287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 27356 - 27420
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  27356 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 27420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27221 - 27268
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27221 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 27268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 2732 - 2796
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  2732 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgg 2796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2613 - 2706
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct-tattctttccaactctatctttatattctgtttatttaatttt 93  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||  | |||  |||| ||  |||| ||||| ||||||||||||||||||    
T  2613 ccaattaggggaacattgatgactcgaaagacctagtctcatctctccatatatattttctaatactatttttattttctgtttatttaatttt 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 57599 - 57542
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  57599 ccaattatgtgaacatagatgattcgaaagacctgatctcatctctctcttattcttt 57542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15524 - 15581
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15524 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctcttattcttt 15581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 15689 - 15760
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  15689 attgagattaaaaccagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaa 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 378 - 442
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  378 aaaataatttatacatcctaaatatttactatattgctaaattgagattaacacagtcctcgtgg 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 233 - 280
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  233 ccaattaggggaacatatatgattcgaaagacctgatctcatctctct 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14329 - 14273
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  14329 ccaattaggggaacatcgatgattcgaaagacctgatctcatctctcttttattctt 14273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 14164 - 14092
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || | |||| ||||||  ||||||||||||||||||||||| ||| |||||||||| |||||    
T  14164 attgagattaaaaccaatccttgtgggatagatatttttactacttcgatagt-tttggtacacttgccaaaat 14092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 58524 - 58460
Alignment:
Q  164 attgagattaacacagtcctcgtgggaacgatatttttactacttcgatagtatttagtacactt 228  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  58524 attgagattaaaacagtccttttgggaacgatatttttactacttcgatagtatttggtacactt 58460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 58689 - 58635
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||||||||||||||||||||||||||| || | ||||||| ||||||||||||    
T  58689 aattaggggaacatagatgattcgaaagatctaaactcatctatctcttattctt 58635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 58453 - 58411
Alignment:
Q  185 gtgggaacgatatttttactacttcgatagtatttagtacact 227  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  58453 gtgggaacgatatttttactacttcaatagtatttggtacact 58411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 198259 - 198306
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  198259 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 198306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 198403 - 198453
Alignment:
Q  138 atcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  198403 atcctaaatatttactttattgctaaattgaaattaacacagtcctcgtgg 198453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29479 - 29533
Alignment:
Q  3 aattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  29479 aattaggggaacatagatgattcgaaagacctaaactcatctctctcttattctt 29533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19392 - 19448
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    ||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  19392 ccaatgaggtgaacatagatgattcgaaagacctaaactcatctctctcttattctt 19448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 19557 - 19628
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  19557 attgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagt-tttggtacacttgccaaaa 19628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 29636 - 29707
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  29636 attgagattaaaactagtccttgtgggaacgatatttttactacttcgatagt-tttggtacacttgccaaaa 29707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 8096 - 8039
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtc 181  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  8096 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtc 8039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 1426 - 1362
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 188  Q
    ||||||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  1426 aaaataatttatacgtcctaaatatttactttattgctaaattgagattaacagagtcctcgtgg 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8229 - 8182
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  8229 ccaattagggaaacataaatgattcgaaagacctgatcttatctctct 8182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 52766 - 52659
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    ||||||||||||||| |||||||| |||||||||| |||| ||||||| |||||||||||  ||||  |  ||||| |||||||||||| |||||| |||    
T  52766 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgatagt-tttagtgcac 52668  T
Q  227 ttgctaaaa 235  Q
    |||||||||    
T  52667 ttgctaaaa 52659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 67715 - 67608
Alignment:
Q  129 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatagtatttagtacac 226  Q
    ||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||  ||||  |  ||||| |||||| ||||| ||||||||||    
T  67715 aatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaacttattttattacttccatagt-tttagtacac 67617  T
Q  227 ttgctaaaa 235  Q
    ||| |||||    
T  67616 ttggtaaaa 67608  T

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Target: scaffold1809 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 177 - 224
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  177 ccaattaggggaacatatatgattcgaaagacctgatctcatctctct 224  T

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Target: scaffold1809; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 310 - 366
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagt 180  Q
    |||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  310 aaaataatttattcatcctaaatatttactttattgctaaattgagattaacacagt 366  T

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Target: scaffold0757 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 5465 - 5511
Alignment:
Q  2 caattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5465 caattaggggaatatagatgattcgaaagacctgatctcatctctct 5511  T

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Target: scaffold0757; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 5597 - 5711
Alignment:
Q  124 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgat--agtattt 219  Q
    ||||||||||| | |||||||||||| || ||||| ||||||||||||||| |||||||||||||  ||||  |  ||||| |||||||||  ||| |||    
T  5597 aaaataatttatatatcctaaatatttactttattactaaattgagattaaaacagtcctcgtggatacgaacttattttattacttcgatgcagt-ttt 5695  T
Q  220 agtacacttgctaaaa 235  Q
    ||||||||||||||||    
T  5696 agtacacttgctaaaa 5711  T

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Target: scaffold0321 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3015 - 2966
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  3015 ccaattaggggaacatagatgattcgaaagacctaaactcatctctctct 2966  T

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Target: scaffold0218 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 10684 - 10757
Alignment:
Q  164 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| || |||||| ||||||||  ||||||||||||||||||||||||| |||||||||| |||||    
T  10684 attgagattaaaaccagtccttgtgggaacattatttttactacttcgatagtatttggtacacttgccaaaat 10757  T

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Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10521 - 10577
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattctt 57  Q
    |||||||||||||||| |||||||||||| ||||   ||||||||||||||||||||    
T  10521 ccaattaggggaacatcgatgattcgaaatacctagactcatctctctcttattctt 10577  T

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Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 65167 - 65094
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaat 236  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||| |||||||||| || ||||||| |||||    
T  65167 attgagattaaaaacagtcatcgtgggaacgatatttttactacttggatagtatttggttcacttgccaaaat 65094  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 241612 - 241661
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctct 50  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  241612 ccaattaggggaacatagatgattcgaaagatctgatctcatatctctct 241661  T

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Target: scaffold0270 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 73 - 25
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctc 49  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  73 ccaattaagggaacatcgatgattcgaaagacctgatctcatctctctc 25  T

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Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 31372 - 31443
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgctaaaa 235  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  31372 attgagattaaaatcagtccttgtgg-aacgatatttttactacttcgatagtatttggtacacttgccaaaa 31443  T

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Target: scaffold0038; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31206 - 31264
Alignment:
Q  1 ccaattagggg-aacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    ||||||||||| |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  31206 ccaattaggggtaacataaatgattcgaaagacctaaactcatctctatcttattcttt 31264  T

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Target: scaffold0807 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 1917 - 1850
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | |||| || ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  1917 attgagattaaaatcagttcttgtgggaacgatatttttaccacttcgatagtatttggtacacttgc 1850  T

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Target: scaffold0807; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2083 - 2026
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctctcttattcttt 58  Q
    |||||| || ||||||||||||||| |||||||| | ||||| |||||||||||||||    
T  2083 ccaattcggagaacatagatgattctaaagacctaagctcatatctctcttattcttt 2026  T

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Target: scaffold0191 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 4193 - 4260
Alignment:
Q  164 attgagattaaca-cagtcctcgtgggaacgatatttttactacttcgatagtatttagtacacttgc 230  Q
    ||||||||||| | ||||||| |||||||| ||| |||||||||||||||||||||| ||||||||||    
T  4193 attgagattaaaatcagtccttgtgggaacaataattttactacttcgatagtatttggtacacttgc 4260  T

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Target: scaffold0191; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4028 - 4075
Alignment:
Q  1 ccaattaggggaacatagatgattcgaaagacctgatctcatctctct 48  Q
    |||||||| | ||||||||||||||||||||||| | |||||||||||    
T  4028 ccaattagagaaacatagatgattcgaaagacctaaactcatctctct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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