View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3368_low_6 (Length: 299)
Name: NF3368_low_6
Description: NF3368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3368_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 7 - 283
Target Start/End: Complemental strand, 41424813 - 41424537
Alignment:
| Q |
7 |
ggtaactatttcaaatttatttcattcaaaattatgtaaatttcttgatgacatgattggtgttacctgaatgctatgacttcgataaactctgtgtcta |
106 |
Q |
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| T |
41424813 |
ggtaactatttcaaatttatttcattcaaaattatgtaaatttcttgatgacatgattggtgttacctgaatgctatgacttcgataaactctgtgtcta |
41424714 |
T |
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| Q |
107 |
tctgcaacatcaaaagaaagtcttcattttaagcaatcgaaacctatcatgcaaccttatgaataagttcaatataaggctttttaatttaatttacatc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41424713 |
tctgcaacatcaaaagaaagtcttcattttaagcaatcgaaacctatcatgcaaccttatgaataagttcaatataaggctttttaatttaatttacatc |
41424614 |
T |
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| Q |
207 |
aaaacttaagaatatctcaaagttaaatctagcttaccccagtttcttccttcacttctcttacagctcctgtataa |
283 |
Q |
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||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41424613 |
aaaacttaagattatctcaaagttaaatcaatcttaccccagtttcttccttcacttctcttacagctcctgtataa |
41424537 |
T |
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