View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3370_high_1 (Length: 546)

Name: NF3370_high_1
Description: NF3370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3370_high_1
NF3370_high_1
[»] chr1 (29 HSPs)
chr1 (137-529)||(52133275-52133667)
chr1 (3-87)||(27564651-27564735)
chr1 (4-84)||(37649299-37649379)
chr1 (3-85)||(41758905-41758987)
chr1 (3-85)||(48716200-48716282)
chr1 (3-87)||(38595254-38595338)
chr1 (3-85)||(3000419-3000501)
chr1 (3-86)||(9474793-9474876)
chr1 (5-87)||(2582017-2582099)
chr1 (1-71)||(38632253-38632323)
chr1 (3-85)||(47452238-47452320)
chr1 (14-95)||(26274540-26274621)
chr1 (3-81)||(32813347-32813425)
chr1 (3-81)||(50630558-50630636)
chr1 (3-87)||(43232-43316)
chr1 (3-81)||(49811449-49811527)
chr1 (9-81)||(51898605-51898677)
chr1 (3-81)||(45044482-45044560)
chr1 (14-55)||(5958948-5958989)
chr1 (14-55)||(50590948-50590989)
chr1 (14-81)||(47748553-47748620)
chr1 (3-73)||(37926368-37926438)
chr1 (3-91)||(8346299-8346388)
chr1 (14-55)||(41608441-41608482)
chr1 (10-65)||(3302471-3302526)
chr1 (14-55)||(44332319-44332360)
chr1 (179-218)||(52145172-52145211)
chr1 (3-52)||(13414861-13414910)
chr1 (9-73)||(11152308-11152372)
[»] scaffold0150 (1 HSPs)
scaffold0150 (179-445)||(8527-8793)
[»] chr4 (29 HSPs)
chr4 (3-87)||(41236447-41236531)
chr4 (3-86)||(42044284-42044367)
chr4 (3-88)||(24995022-24995107)
chr4 (3-85)||(6034144-6034226)
chr4 (3-85)||(48182967-48183049)
chr4 (3-83)||(54473453-54473533)
chr4 (3-86)||(23608335-23608418)
chr4 (3-88)||(11511378-11511462)
chr4 (3-81)||(29239986-29240064)
chr4 (3-73)||(40574879-40574949)
chr4 (3-62)||(480388-480447)
chr4 (1-81)||(29547881-29547961)
chr4 (9-81)||(50526093-50526165)
chr4 (14-81)||(19670638-19670705)
chr4 (14-81)||(55475302-55475369)
chr4 (3-81)||(31910292-31910370)
chr4 (3-81)||(41823982-41824060)
chr4 (3-81)||(50052350-50052428)
chr4 (3-85)||(53352492-53352566)
chr4 (14-81)||(47986319-47986385)
chr4 (14-55)||(17983691-17983732)
chr4 (3-43)||(29234205-29234245)
chr4 (14-81)||(18924417-18924484)
chr4 (14-81)||(50813814-50813881)
chr4 (14-76)||(29589667-29589729)
chr4 (10-81)||(28480190-28480261)
chr4 (10-81)||(28481065-28481136)
chr4 (10-81)||(28481940-28482011)
chr4 (14-47)||(44536702-44536735)
[»] chr7 (35 HSPs)
chr7 (3-86)||(19329942-19330025)
chr7 (3-87)||(8080299-8080383)
chr7 (3-87)||(32951409-32951493)
chr7 (3-86)||(38837317-38837400)
chr7 (3-87)||(4999430-4999514)
chr7 (3-86)||(7389489-7389571)
chr7 (3-86)||(40957807-40957890)
chr7 (17-90)||(3434666-3434739)
chr7 (3-91)||(35137633-35137721)
chr7 (14-86)||(36362125-36362197)
chr7 (3-85)||(38267140-38267222)
chr7 (14-87)||(36361841-36361914)
chr7 (3-87)||(11044278-11044362)
chr7 (3-63)||(31735977-31736037)
chr7 (3-81)||(35522976-35523054)
chr7 (3-81)||(46033723-46033801)
chr7 (3-76)||(19436114-19436187)
chr7 (3-65)||(3784095-3784157)
chr7 (3-56)||(3694467-3694520)
chr7 (14-55)||(8238324-8238365)
chr7 (14-81)||(22343472-22343539)
chr7 (14-81)||(38044308-38044375)
chr7 (10-81)||(41423789-41423860)
chr7 (14-81)||(41915852-41915919)
chr7 (3-61)||(26296744-26296802)
chr7 (14-55)||(32564374-32564415)
chr7 (20-81)||(46374746-46374807)
chr7 (14-81)||(7728017-7728084)
chr7 (17-81)||(16374746-16374810)
chr7 (9-81)||(21234507-21234579)
chr7 (10-65)||(18207286-18207341)
chr7 (3-81)||(12311004-12311082)
chr7 (9-63)||(27744249-27744303)
chr7 (40-81)||(39255846-39255887)
chr7 (10-75)||(45223149-45223214)
[»] chr2 (34 HSPs)
chr2 (3-91)||(17473120-17473208)
chr2 (3-85)||(13438443-13438525)
chr2 (3-85)||(30915563-30915645)
chr2 (3-87)||(28381571-28381655)
chr2 (3-94)||(10249291-10249382)
chr2 (3-86)||(19930737-19930820)
chr2 (3-93)||(28863555-28863646)
chr2 (3-87)||(40701578-40701662)
chr2 (3-86)||(7465652-7465735)
chr2 (3-94)||(9058580-9058671)
chr2 (5-87)||(4060787-4060869)
chr2 (5-85)||(32505566-32505646)
chr2 (3-81)||(20700915-20700993)
chr2 (14-85)||(5574418-5574489)
chr2 (3-85)||(38882729-38882811)
chr2 (20-88)||(27864808-27864876)
chr2 (3-81)||(40613824-40613902)
chr2 (3-76)||(42257293-42257366)
chr2 (1-65)||(2533221-2533285)
chr2 (3-83)||(33436020-33436100)
chr2 (10-81)||(17823895-17823966)
chr2 (3-81)||(36168936-36169014)
chr2 (3-81)||(41758687-41758765)
chr2 (14-81)||(13365464-13365531)
chr2 (14-81)||(43490232-43490299)
chr2 (3-81)||(3440079-3440157)
chr2 (14-55)||(2997435-2997476)
chr2 (3-47)||(38273098-38273142)
chr2 (14-81)||(3034905-3034972)
chr2 (14-81)||(38732465-38732532)
chr2 (10-81)||(44152034-44152105)
chr2 (14-55)||(45097683-45097724)
chr2 (9-81)||(3738049-3738121)
chr2 (10-46)||(17819961-17819997)
[»] chr8 (34 HSPs)
chr8 (3-86)||(14548022-14548105)
chr8 (3-86)||(34012213-34012296)
chr8 (3-86)||(42710211-42710294)
chr8 (3-85)||(504039-504121)
chr8 (3-85)||(9122285-9122367)
chr8 (3-85)||(12831147-12831229)
chr8 (3-85)||(23122515-23122597)
chr8 (3-81)||(40423865-40423943)
chr8 (3-85)||(1179858-1179940)
chr8 (3-81)||(43414503-43414581)
chr8 (3-85)||(15197433-15197515)
chr8 (3-85)||(44507006-44507087)
chr8 (14-82)||(24307714-24307782)
chr8 (9-81)||(37038585-37038657)
chr8 (14-81)||(16056323-16056390)
chr8 (14-81)||(32707925-32707992)
chr8 (3-81)||(5957930-5958008)
chr8 (5-73)||(15048111-15048179)
chr8 (1-81)||(25838287-25838367)
chr8 (14-82)||(30479395-30479463)
chr8 (14-81)||(32032835-32032902)
chr8 (14-81)||(34307327-34307394)
chr8 (3-81)||(4854785-4854863)
chr8 (3-81)||(8841354-8841432)
chr8 (14-81)||(42354510-42354577)
chr8 (3-81)||(15258851-15258929)
chr8 (292-338)||(17016475-17016521)
chr8 (292-338)||(17546912-17546958)
chr8 (14-47)||(16383488-16383521)
chr8 (3-43)||(10621047-10621087)
chr8 (181-332)||(17522739-17522890)
chr8 (10-65)||(42221622-42221677)
chr8 (15-81)||(10284553-10284619)
chr8 (15-73)||(30183806-30183864)
[»] chr6 (19 HSPs)
chr6 (3-86)||(11427718-11427801)
chr6 (3-86)||(17598654-17598737)
chr6 (3-86)||(22880575-22880658)
chr6 (3-86)||(32869778-32869861)
chr6 (3-86)||(29857927-29858010)
chr6 (3-87)||(23128042-23128127)
chr6 (3-82)||(15832677-15832756)
chr6 (3-81)||(31110683-31110761)
chr6 (3-81)||(31976348-31976426)
chr6 (3-88)||(6209381-6209465)
chr6 (14-81)||(4231659-4231726)
chr6 (14-81)||(15989964-15990031)
chr6 (14-81)||(30341282-30341349)
chr6 (3-84)||(946476-946557)
chr6 (3-52)||(31109351-31109400)
chr6 (14-81)||(15507946-15508013)
chr6 (3-81)||(28536410-28536488)
chr6 (3-73)||(30870114-30870184)
chr6 (14-81)||(31952952-31953019)
[»] chr3 (32 HSPs)
chr3 (3-86)||(33644300-33644383)
chr3 (3-85)||(53982111-53982193)
chr3 (3-91)||(31456789-31456877)
chr3 (3-86)||(52629400-52629483)
chr3 (3-86)||(54868812-54868895)
chr3 (3-85)||(49607514-49607596)
chr3 (3-81)||(11347844-11347922)
chr3 (3-84)||(36707347-36707428)
chr3 (14-95)||(11095275-11095356)
chr3 (17-86)||(48587018-48587087)
chr3 (7-83)||(9563103-9563179)
chr3 (3-81)||(20764837-20764915)
chr3 (3-81)||(30801655-30801733)
chr3 (3-81)||(41189686-41189764)
chr3 (3-81)||(51419282-51419360)
chr3 (3-81)||(26141452-26141532)
chr3 (3-87)||(17470505-17470589)
chr3 (14-84)||(27714822-27714892)
chr3 (14-55)||(36331277-36331318)
chr3 (3-81)||(33118772-33118851)
chr3 (14-81)||(42823222-42823289)
chr3 (14-81)||(45058475-45058542)
chr3 (3-81)||(8076493-8076571)
chr3 (3-81)||(26754795-26754873)
chr3 (3-81)||(47531965-47532043)
chr3 (3-81)||(48375628-48375706)
chr3 (14-81)||(35536737-35536804)
chr3 (3-81)||(35965704-35965782)
chr3 (3-76)||(39670111-39670184)
chr3 (10-81)||(43746446-43746517)
chr3 (10-76)||(21746115-21746181)
chr3 (10-55)||(1758405-1758449)
[»] scaffold0321 (1 HSPs)
scaffold0321 (3-86)||(10026-10109)
[»] scaffold0237 (1 HSPs)
scaffold0237 (3-86)||(4129-4212)
[»] chr5 (23 HSPs)
chr5 (3-86)||(2740374-2740457)
chr5 (3-86)||(33149555-33149638)
chr5 (3-85)||(35785299-35785381)
chr5 (5-85)||(14831916-14831996)
chr5 (3-91)||(18520796-18520884)
chr5 (3-86)||(40145507-40145590)
chr5 (3-73)||(36732872-36732942)
chr5 (3-81)||(15409532-15409610)
chr5 (3-81)||(6679798-6679876)
chr5 (3-77)||(13811752-13811826)
chr5 (3-51)||(36875564-36875612)
chr5 (3-81)||(35943814-35943892)
chr5 (9-81)||(31009094-31009166)
chr5 (17-85)||(31132448-31132516)
chr5 (14-81)||(2252090-2252157)
chr5 (14-81)||(3921187-3921254)
chr5 (3-73)||(26720616-26720686)
chr5 (3-73)||(26990365-26990435)
chr5 (3-45)||(39557475-39557517)
chr5 (15-81)||(39688819-39688885)
chr5 (3-55)||(2177464-2177516)
chr5 (39-86)||(16115249-16115296)
chr5 (3-81)||(33825246-33825324)
[»] scaffold1268 (1 HSPs)
scaffold1268 (3-81)||(851-929)
[»] scaffold1267 (1 HSPs)
scaffold1267 (3-81)||(851-929)
[»] scaffold0316 (1 HSPs)
scaffold0316 (3-81)||(17203-17281)
[»] scaffold0110 (1 HSPs)
scaffold0110 (15-81)||(8785-8851)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-81)||(152609-152676)


Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 137 - 529
Target Start/End: Original strand, 52133275 - 52133667
Alignment:
Q  137 atgacctatttaacaaatataaatagaaaataatgatatactttacctcatccattcccatctcaacaaccttttcctgcaatgcaccaacctccttgat 236  Q
    ||||| |||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52133275 atgacatatttaacaaatataaatatcaaataacaatatactttacctcatccattcccatctcaacaaccttttcctgcaacgcaccaacctccttgat 52133374  T
Q  237 attgaatttgttcagcaaagtaatgcttgatatggttgacattggttgaactactaaatcatccatcaccataaatgtcacaacatctttcacaaaacca 336  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52133375 attgaatttgttcagcaaagtaatgcttgatattgttgacattggctgaacgactaaatcatccatcaccataaatgtcacaacatctttcacaaaacca 52133474  T
Q  337 ttcgcagtcgaaatgttctcttcaacagccttctctccgatataatgtatttgatggttcatagtttgattgcaaccagaacaacgagttgaaatatcac 436  Q
    ||||||||||||||||||| |   |||||||||| ||| |||||||  ||||||| |  ||||  |||| |||||  |  ||||||||||||  ||||||    
T  52133475 ttcgcagtcgaaatgttctttcggacagccttctttccaatataatccatttgataggccataacttgactgcaattaatacaacgagttgagctatcac 52133574  T
Q  437 atgtgacataagcacattggtttgagcatctatagtacaaagttccttcagctcctacgatgttatttgcatcagcatcatttgtgggaagaa 529  Q
    ||||||||||||||||   |||| |||||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  52133575 atgtgacataagcacacctgtttaagcatctatagtacaaagttacttcatctcctacgatgttattggcatctgcatcatttgcgggaagaa 52133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 27564735 - 27564651
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  27564735 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 27564651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 37649299 - 37649379
Alignment:
Q  4 cttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattact 84  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  37649299 cttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 37649379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 41758905 - 41758987
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  41758905 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 41758987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 48716282 - 48716200
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48716282 tcttttctttcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 48716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 38595254 - 38595338
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  38595254 tcttttctctcatcttctctcttcctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactcta 38595338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 3000419 - 3000501
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  3000419 tcttttctctcatcttctctcttcctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 3000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 9474876 - 9474793
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||  |||||||  ||||||||||||||||||||    
T  9474876 tcttttctctcctcttctctcttcctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcattactct 9474793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 2582017 - 2582099
Alignment:
Q  5 ttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||| ||| |||||||||||||||||    
T  2582017 ttttctctcctcttctctcttcctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcattactcta 2582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38632323 - 38632253
Alignment:
Q  1 tttcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtct 71  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  38632323 tttcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 47452320 - 47452238
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| ||||||| |||||||  |||||||||||||||||||    
T  47452320 tcttttctctcctcttctctcttcctattgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcattactc 47452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 26274540 - 26274621
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaataaa 95  Q
    |||||||||||||||||| |||| | || |||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  26274540 ctcttctctcttcctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcattactctaaaaataaa 26274621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 32813347 - 32813425
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  32813347 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 50630558 - 50630636
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||  |||||| | |||||||| ||||||    
T  50630558 tcttttctctcctcttctctcttcctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcatt 50630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 43232 - 43316
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| ||||||   |||||||| | |||||||||||||||||||    
T  43232 tcttttctctcctcctctctctttctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcattactcta 43316  T

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Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 49811527 - 49811449
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||  |||||||| |||||||||| ||||    
T  49811527 tcttttctctcctcttctctcttcctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 51898677 - 51898605
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| | |||||||| ||| |||||| ||||    
T  51898677 ctctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 51898605  T

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Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 45044560 - 45044482
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||||||  |||||| | |||||| ||| ||||    
T  45044560 tcttttctcttctcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacatt 45044482  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 5958989 - 5958948
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5958989 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 5958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 50590989 - 50590948
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  50590989 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 50590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 47748553 - 47748620
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||||||| |||||||  | |||| | |||||||||| ||||    
T  47748553 ctcttctctcttcctaatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgtaacatt 47748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 37926438 - 37926368
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||| ||||||  |||||| | |||||||    
T  37926438 tcttttctcttctcttctctcttcctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctat 37926368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 8346388 - 8346299
Alignment:
Q  3 tcttttctctcctcttct-ctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaa 91  Q
    |||||||||||||||| | ||||||||||| ||||| |||||||| ||||||||  |||||| | | | ||||||||||||||| |||||    
T  8346388 tcttttctctcctctttttctcttcctaatgcatggagtgtacaaaggtgtatgagaataaatggtatttatgtatcattactcaaaaaa 8346299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 41608482 - 41608441
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  41608482 ctcttctctcttcctaatacatagggtgtacaagggtgtatg 41608441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 3302526 - 3302471
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaagg 65  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||| |||||||||    
T  3302526 tctcatcttctctcttccaaatatatagggtgtacaagggtgtatgttaataaagg 3302471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 44332360 - 44332319
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  44332360 ctcttctctcttcctaatacatagagtgtacaagggtgtatg 44332319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 52145172 - 52145211
Alignment:
Q  179 ttacctcatccattcccatctcaacaaccttttcctgcaa 218  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  52145172 ttacctcatctattcccatctcaacaaccttttcttgcaa 52145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 13414861 - 13414910
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgt 52  Q
    |||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  13414861 tcttttctatcatcttctctcttcctaatgcatggagtgtactagggtgt 13414910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11152372 - 11152308
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    ||||||||||||||||||| | | ||||||||||| |||| ||||||  |||||| | |||||||    
T  11152372 ctctcctcttctctcttcccagtgcatggggtgtagaaggatgtatgagaataaatggtgtctat 11152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 179 - 445
Target Start/End: Original strand, 8527 - 8793
Alignment:
Q  179 ttacctcatccattcccatctcaacaaccttttcctgcaatgcaccaacctccttgatattgaatttgttcagcaaagtaatgcttgatatggttgacat 278  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8527 ttacctcatccattcccatctcaacaaccttttcctgcaaggtaccaacctccttgatattgaatttgttcagcaaagtaatgcttgatatggttgacat 8626  T
Q  279 tggttgaactactaaatcatccatcaccataaatgtcacaacatctttcacaaaaccattcgcagtcgaaatgttctcttcaacagccttctctccgata 378  Q
    ||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||  | | |||| ||| ||||||||| |||| | ||| | |    
T  8627 tggctgaaccactaaatcgtccattaccataaatgtcacaacatctttcacaaaaccattcttaatagaaacgttatcttcaacaaccttttttccaaca 8726  T
Q  379 taatgtatttgatggttcatagtttgattgcaaccagaacaacgagttgaaatatcacatgtgacat 445  Q
    |||| || |||    |||||||    | ||||||  ||||||||||||||  |||||||||||||||    
T  8727 taatttacttgtacattcatagcactactgcaacaggaacaacgagttgagctatcacatgtgacat 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 41236447 - 41236531
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  41236447 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 41236531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 42044367 - 42044284
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  42044367 tcttttctctcctcttctctcttcctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactct 42044284  T

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Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 24995107 - 24995022
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaa 88  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  24995107 tcttttctctcctcttctctcttcttaatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattactctaa 24995022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 6034144 - 6034226
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  6034144 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactc 6034226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 48183049 - 48182967
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  48183049 tcttttctctcctcttctctcttcttaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 48182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 54473533 - 54473453
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattac 83  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||  ||||||||||||    
T  54473533 tcttttctctcctcttctctcttcctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcattac 54473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 23608335 - 23608418
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||| |||||||||||||||||||||| |||| |||||||| || ||||||| |||||||| ||||||||||||||||||||    
T  23608335 tcttttatctcctcttctctcttcctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactct 23608418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11511462 - 11511378
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaa 88  Q
    |||||||||| ||||||||||||| |||| |||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  11511462 tcttttctcttctcttctctcttcttaatgcatgaggtgtacaagggtgtatggaaataaatg-tgtctatgtatcattactctaa 11511378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 29239986 - 29240064
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  29239986 tctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 40574879 - 40574949
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| | |||||||    
T  40574879 tcttttctctcctcttctctcttcctaatatatggggtgtacaagggtgtatgagaataaaaggtgtctat 40574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 480447 - 480388
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataa 62  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  480447 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaaggtgtatggaaataa 480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29547961 - 29547881
Alignment:
Q  1 tttcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  29547961 tttctttcttcttctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 50526165 - 50526093
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| | |||||||| ||| |||||| ||||    
T  50526165 ctctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 50526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 19670705 - 19670638
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  19670705 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 55475302 - 55475369
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  55475302 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 31910292 - 31910370
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||| |||||||| |||||| | |||||||||| ||||    
T  31910292 tcttttctctcatcttctctcttcctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

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Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 41823982 - 41824060
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||  |||||| | |||||||||| ||||    
T  41823982 tcttttctctcttcttctctcttcctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 50052428 - 50052350
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | |||  ||||||||| ||||||||| |||||||| |||||||||| ||||    
T  50052428 tctttcctctcctcttctctcttcctagtgcataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

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Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 53352566 - 53352492
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||  |||||||| |||||||||||||||||||    
T  53352566 tcttttctctcctcttctctcttccta--------ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactc 53352492  T

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Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 47986319 - 47986385
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | |||||| |||||||||| ||||    
T  47986319 ctcttctctcttcctaatacatgggatgtacaagggtgtatgcaattaaagg-tgtctatgtaacatt 47986385  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 17983732 - 17983691
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  17983732 ctcttctctcttcctaatacatgaggtgtacaagggtgtatg 17983691  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 29234245 - 29234205
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgta 43  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29234245 tcttttctctcctcttctctcttcctaatgcatggggtgta 29234205  T

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Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 18924484 - 18924417
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| |||||| |||||||||||  | |||| | |||||||||| ||||    
T  18924484 ctcttctctcttcctaatacatgaggtgtaaaagggtgtatgcaattaaaaggtgtctatgtaacatt 18924417  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 50813881 - 50813814
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| | ||||||||||||||||  | |||| | |||||||||| ||||    
T  50813881 ctcttctctcttcctaatacatgagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 50813814  T

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Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 29589729 - 29589667
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgta 76  Q
    ||||||||||||||||||||||| |||||||||| |||||||  | |||| | ||||||||||    
T  29589729 ctcttctctcttcctaatacatgaggtgtacaagagtgtatgcaattaaaaggtgtctatgta 29589667  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28480261 - 28480190
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||| | |||| | ||||||||| |||||  | ||||||| |||||||||| ||||    
T  28480261 tctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacatt 28480190  T

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Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28481136 - 28481065
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||| | |||| | ||||||||| |||||  | ||||||| |||||||||| ||||    
T  28481136 tctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacatt 28481065  T

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Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 28482011 - 28481940
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||| | |||| | ||||||||| |||||  | ||||||| |||||||||| ||||    
T  28482011 tctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacatt 28481940  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 44536735 - 44536702
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaag 47  Q
    |||||||||||||||||||||| |||||||||||    
T  44536735 ctcttctctcttcctaatacatagggtgtacaag 44536702  T

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Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 19329942 - 19330025
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19329942 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 19330025  T

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Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 8080383 - 8080299
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  8080383 tcttttctctcctcttctctcttcctattgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcta 8080299  T

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Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 32951493 - 32951409
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||    
T  32951493 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactcta 32951409  T

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Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 38837317 - 38837400
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  38837317 tcttttctctcctcttctctcttcctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactct 38837400  T

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Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 4999514 - 4999430
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||  |||||| | |||||||||||||||||||||    
T  4999514 tcttttatctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactcta 4999430  T

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Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 7389489 - 7389571
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  7389489 tcttttctctcctactctctcttcctaatacatggggtgtac-agggtgtatgggaataaaggatgtctatgtatcattactct 7389571  T

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Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 40957807 - 40957890
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  40957807 tcttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactct 40957890  T

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Target: chr7; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 3434666 - 3434739
Alignment:
Q  17 ttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaa 90  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||    
T  3434666 ttctctcttcctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcattactcaaaaa 3434739  T

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Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 35137633 - 35137721
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaa 91  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||  || ||| | | |||||| ||||||||||||||||    
T  35137633 tcttttctctcctcttctctcttcctaatgcatgggatgtacaagggtgtatgagaacaaatggtatctatggatcattactctaaaaa 35137721  T

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Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 36362125 - 36362197
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||| ||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  36362125 ctcttttctcttcctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 36362197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 38267140 - 38267222
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| |||||| | | |||||||||||||||||    
T  38267140 tcttttctctcctcttctctcttcctaatgcatgggatgtacgaaggtgtatggaaataaatgatatctatgtatcattactc 38267222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 36361914 - 36361841
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||| ||||||||||||||||||  ||||||||||||||||  |||||||| |||||||||||||||||||||    
T  36361914 ctcttttctcttcctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcattactcta 36361841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 11044278 - 11044362
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  11044278 tctttcctctcatcttctctcttcctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcattactcta 11044362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 31735977 - 31736037
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaa 63  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  31735977 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaa 31736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 35522976 - 35523054
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||| | ||| |||||| ||||    
T  35522976 tcttttctctcttcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 46033801 - 46033723
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  46033801 tcttttctctcctcttctctattcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 19436187 - 19436114
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgta 76  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||  |||||| | ||||||||||    
T  19436187 tcttttctcttctcttttctcttcctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 3784095 - 3784157
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaagg 65  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||  ||||||||    
T  3784095 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagaatgtatgtgaataaagg 3784157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3694467 - 3694520
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatgg 56  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  3694467 tcttttctctcctcttctctcttcccaatgcatggggtgtacaagagtgtatgg 3694520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 8238324 - 8238365
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8238324 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 8238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 22343472 - 22343539
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | |||| | |||||||||| ||||    
T  22343472 ctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 22343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 38044308 - 38044375
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  38044308 ctcttttctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 41423789 - 41423860
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||  |||||||| ||| |||||| ||||    
T  41423789 tctcctcttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacatt 41423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 41915852 - 41915919
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  41915852 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 41915919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 26296744 - 26296802
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaata 61  Q
    |||||||||||||||||||||||| ||||  ||| ||||||||||||||||||| ||||    
T  26296744 tcttttctctcctcttctctcttcttaatgtatgaggtgtacaagggtgtatggaaata 26296802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 32564415 - 32564374
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  32564415 ctcttctctcttcctaatacatgaggtgtacaagggtgtatg 32564374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 46374807 - 46374746
Alignment:
Q  20 tctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  46374807 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 7728017 - 7728084
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  | |||| | |||||||||| ||||    
T  7728017 ctcttctctcttcctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 7728084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 16374810 - 16374746
Alignment:
Q  17 ttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||  |||| |||||||| ||||||||  |||||||| |||||||||| ||||    
T  16374810 ttctctcttcctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 21234507 - 21234579
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||| | |||||||||||||  ||||||||||||| ||||||||  |||||| | |||||||||| ||||    
T  21234507 ctctcctttcctctcttcctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacatt 21234579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 18207286 - 18207341
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaagg 65  Q
    |||||||||||||||||||| |  || | ||||||||||||||||| |||||||||    
T  18207286 tctcctcttctctcttcctagtggatagagtgtacaagggtgtatgataataaagg 18207341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 12311004 - 12311082
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| || |||||||||||||||||| || |   | ||||||| ||||||||| |||||||| |||||||||| ||||    
T  12311004 tctttcctttcctcttctctcttcctagtatacaagatgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 12311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 27744303 - 27744249
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaa 63  Q
    ||||||||||||||||||||| | |||||| ||||||||| | ||||| ||||||    
T  27744303 ctctcctcttctctcttcctagtgcatgggatgtacaaggatatatgggaataaa 27744249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 39255887 - 39255846
Alignment:
Q  40 tgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||| ||||||||| |||||||||| ||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgtaacatt 39255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 45223149 - 45223214
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgt 75  Q
    |||| ||||||||||| | |||| ||||||||||||| | ||||||  |||||||| |||||||||    
T  45223149 tctcatcttctctctttcaaatatatggggtgtacaaagatgtatgtaaataaaggatgtctatgt 45223214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 17473120 - 17473208
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaa 91  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  17473120 tcttttctctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcaaaaaa 17473208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 13438443 - 13438525
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  13438443 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 13438525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 30915563 - 30915645
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  30915563 tcttttctctcatcttctctcttcctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 30915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 28381655 - 28381571
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  28381655 tcttttctctcatcttctctcttcctaatatatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcta 28381571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 10249382 - 10249291
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaataa 94  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||| || |||||    
T  10249382 tcttttctctcctcttttctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactccaataataa 10249291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 19930820 - 19930737
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  19930820 tcttttctctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattactct 19930737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 28863555 - 28863646
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc-taaaaata 93  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  28863555 tcttttatctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcataaaaata 28863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 40701578 - 40701662
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  40701578 tcttttctctcatcttctctcttcctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcta 40701662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 7465735 - 7465652
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||| |||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  7465735 tcttttatctcttcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 7465652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 9058580 - 9058671
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaataa 94  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| | | ||| ||||||||||| ||||||||    
T  9058580 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagagtgtatgggaataaagggtatttatatatcattactcgaaaaataa 9058671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4060787 - 4060869
Alignment:
Q  5 ttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| | ||| |||||||||||||||||    
T  4060787 ttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattactcta 4060869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 32505646 - 32505566
Alignment:
Q  5 ttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||  |||||||||||||||||||    
T  32505646 ttttctctcctcttctctcttcttaatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcattactc 32505566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 20700915 - 20700993
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  20700915 tctttcctctcctcttctctcttcctagtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5574489 - 5574418
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  5574489 ctcttttctcttcctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 5574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 38882811 - 38882729
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||  |||| |||||||||||| |||||||||||||||||||||||| |||||| | | |||||||||||||||||    
T  38882811 tcttttctcttatcttatctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcattactc 38882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 27864808 - 27864876
Alignment:
Q  20 tctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaa 88  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| |||| |||||||||||||||||    
T  27864808 tctcttcctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcattactctaa 27864876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 40613902 - 40613824
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||| |||| ||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  40613902 tcttttctctcctattctttcttcataatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 42257293 - 42257366
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgta 76  Q
    |||||||||||||||||| ||||||||||  |||||||||||||| |||||| | |||||||| ||||||||||    
T  42257293 tcttttctctcctcttctttcttcctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2533221 - 2533285
Alignment:
Q  1 tttcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaagg 65  Q
    |||||||| |||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||    
T  2533221 tttcttttatctcctcttctctcttcccaatgtatggggtgtacaagggtgtatgggaataaagg 2533285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 33436100 - 33436020
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattac 83  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||  |||||| | |||||||| ||||||||    
T  33436100 tctttcctctcatcttctctcttcctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcattac 33436020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 17823895 - 17823966
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||  |||||||| |||||||||| ||||    
T  17823895 tctcatcttctctcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacatt 17823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 36168936 - 36169014
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||| |||||||||||||||  |||||||||||||| |||||||  |||||||| ||| |||||| ||||    
T  36168936 tcttttctctcctattctctcttcctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacatt 36169014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 41758687 - 41758765
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||   |||||||||| ||||    
T  41758687 tcttttatctcctcttctctcttcctaatatatggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatt 41758765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 13365464 - 13365531
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||||||||||| |||  | |||| | |||||||||| ||||    
T  13365464 ctcttctctcttcctaatacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgtaacatt 13365531  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 43490232 - 43490299
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||| |||||||||||||||||||  | |||| | |||||||||| ||||    
T  43490232 ctcttctctcttcctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 43490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 3440079 - 3440157
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||| |||  | || |||||||||| ||||||||| |||||||| |||||||||| ||||    
T  3440079 tctttcctctcctcttctctctttctagaatatagggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 3440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 2997476 - 2997435
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  2997476 ctcttctctcttcctaatacatgaggtgtacaagggtgtatg 2997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 38273142 - 38273098
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaag 47  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||    
T  38273142 tcttttctctcctattctctcttcctaatgtatggggtgtacaag 38273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 3034972 - 3034905
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| ||||||| | ||||||||  | |||| | |||||||||| ||||    
T  3034972 ctcttctctcttcctaatacatgaggtgtaccaaggtgtatgcaattaaaaggtgtctatgtaacatt 3034905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 38732465 - 38732532
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| | ||||||||| ||||||  | |||| | |||||||||| ||||    
T  38732465 ctcttctctcttcctaatacatgagatgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 38732532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 44152034 - 44152105
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||| |||| | | ||||||||||||||  |||||| | ||| |||||| ||||    
T  44152034 tctcctcttctctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacatt 44152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 45097724 - 45097683
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    |||||||||||||||||||||| || |||||||| |||||||    
T  45097724 ctcttctctcttcctaatacatcggatgtacaagagtgtatg 45097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 3738049 - 3738121
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||| ||||||||  | || |||||||||| ||||||||  |||| ||| |||||||||| ||||    
T  3738049 ctctcctcttctttcttcctagaatatagggtgtacaaaggtgtatgaaaatatagggtgtctatgtaacatt 3738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 17819997 - 17819961
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaa 46  Q
    |||||||||||||||||||||| |||| |||||||||    
T  17819997 tctcctcttctctcttcctaatgcatgaggtgtacaa 17819961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 14548022 - 14548105
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  14548022 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 14548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 34012296 - 34012213
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  34012296 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactct 34012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 42710294 - 42710211
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||    
T  42710294 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactct 42710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 504121 - 504039
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  504121 tcttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9122285 - 9122367
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||  |||||||||||||||||||    
T  9122285 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcattactc 9122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 12831147 - 12831229
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  12831147 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcattactc 12831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 23122597 - 23122515
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  23122597 tcttttctctcctgttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 23122515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 40423943 - 40423865
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||||||||||||||    
T  40423943 tcttttctctcctcttctctcttcctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 40423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 1179940 - 1179858
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| |||||||| ||||||| |||||||||||    
T  1179940 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcattactc 1179858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 43414581 - 43414503
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  43414581 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 15197433 - 15197515
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||| ||||||   |||||||||||||||||||    
T  15197433 tcttttctctcctcttttctcttccaaatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcattactc 15197515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 44507087 - 44507006
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||   |||||||||||||||||||    
T  44507087 tcttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcattactc 44507006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 24307782 - 24307714
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatta 82  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| |||||    
T  24307782 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 24307714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 37038585 - 37038657
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| | |||||||| ||| |||||| ||||    
T  37038585 ctctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacatt 37038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 16056390 - 16056323
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  16056390 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 32707992 - 32707925
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  32707992 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 5957930 - 5958008
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | |||| ||||||||||||||||||  |||||||| ||| |||||| ||||    
T  5957930 tctttcctctcctcttctctcttcctagtgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacatt 5958008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15048179 - 15048111
Alignment:
Q  5 ttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||| ||||||||||||||||||||||  ||||| ||||||||||||||| | |||||||| |||||||    
T  15048179 ttttatctcctcttctctcttcctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctat 15048111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25838287 - 25838367
Alignment:
Q  1 tttcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||| || |||||  || |||||||||||| ||||||| |||||||| | |||||||| ||||    
T  25838287 tttcttttctctcctcttctcttttgctaatgtatagggtgtacaaggttgtatggcaataaaggatatctatgtaacatt 25838367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 30479463 - 30479395
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatta 82  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | |||| | |||||||||| |||||    
T  30479463 ctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 30479395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 32032835 - 32032902
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | |||| | |||||||||| ||||    
T  32032835 ctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32032902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 34307327 - 34307394
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  34307327 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 4854863 - 4854785
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| |||||  ||||| ||||||||||| ||||  |||||||  |||||||||| ||||    
T  4854863 tcttttctctcctcttctctcttactaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacatt 4854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 8841432 - 8841354
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||||||| |||||| | ||||||||||||||| |||||||  |||||| | |||||||||| ||||    
T  8841432 tctttcctctcctcttctcttttcctagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 42354577 - 42354510
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||| | ||||||||||| |||||||||||  |||||| | |||||||||| ||||    
T  42354577 ctcttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 15258929 - 15258851
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||||||||||||||  | || || |||||||  |||||||| |||||||| |||||||||| ||||    
T  15258929 tctttcctctcctcttctctcttcctagaatataggatgtacaaaagtgtatggaaataaagggtgtctatgtaacatt 15258851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 17016475 - 17016521
Alignment:
Q  292 aaatcatccatcaccataaatgtcacaacatctttcacaaaaccatt 338  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  17016475 aaatcatccatgaccatgaaagtcacaacatctttcacaaaaccatt 17016521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 17546912 - 17546958
Alignment:
Q  292 aaatcatccatcaccataaatgtcacaacatctttcacaaaaccatt 338  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  17546912 aaatcatccatgaccatgaaagtcacaacatctttcacaaaaccatt 17546958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 16383488 - 16383521
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaag 47  Q
    ||||||||||||||||||||||||||||||||||    
T  16383488 ctcttctctcttcctaatacatggggtgtacaag 16383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 10621087 - 10621047
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgta 43  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  10621087 tcttttctctcctcttctctcttcctaatatatgggatgta 10621047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 332
Target Start/End: Complemental strand, 17522890 - 17522739
Alignment:
Q  181 acctcatccattcccatctcaacaaccttttcctgcaatgcaccaacctccttgatattgaatttgttcagcaaagtaatgcttgatatggttgacattg 280  Q
    ||||||||||| ||||||||||| || ||||| ||||  | ||||| ||| || | ||| || ||||| ||||  || ||||| ||||| |||||||| |    
T  17522890 acctcatccatccccatctcaaccactttttcttgcagagtaccaatctctttcacattaaacttgttgagcagtgtgatgctagatatagttgacatgg 17522791  T
Q  281 gttgaactactaaatcatccatcaccataaatgtcacaacatctttcacaaa 332  Q
    | ||||  || ||||||||||| ||||| || || |  ||||||||||||||    
T  17522790 gctgaatgaccaaatcatccataaccatgaaagttatgacatctttcacaaa 17522739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 42221622 - 42221677
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaagg 65  Q
    |||| ||||||||||||| |||| || |||||||||||||||||||  ||||||||    
T  42221622 tctcatcttctctcttccaaatatatagggtgtacaagggtgtatgtaaataaagg 42221677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 10284619 - 10284553
Alignment:
Q  15 tcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||| | |||||||||||||||| |||||   |||||| | |||||||||| ||||    
T  10284619 tcttctctcttcctagtgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 30183864 - 30183806
Alignment:
Q  15 tcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||||| |||||| |||| |||||||||||||| |||||||  |||||||| |||||||    
T  30183864 tcttctttcttccaaatatatggggtgtacaagagtgtatgtaaataaaggatgtctat 30183806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 11427718 - 11427801
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  11427718 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11427801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 17598654 - 17598737
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  17598654 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 17598737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 22880658 - 22880575
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||||||    
T  22880658 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcattactct 22880575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 32869778 - 32869861
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  32869778 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 32869861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 29857927 - 29858010
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  29857927 tcttttctcttctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactct 29858010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 23128127 - 23128042
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaat-aaaggttgtctatgtatcattactcta 87  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  23128127 tcttttctctcctcttttctcttcctaatgcatgggatgtacaagggtgtatggaaataaaaggttctctatgtatcattactcta 23128042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 15832677 - 15832756
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatta 82  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||||| | |||||||| |||||| |||||||||    
T  15832677 tcttttttctcctcttctatcttcctaatgcatggggtgtacaagggtgtattggaataaagggtgtctacgtatcatta 15832756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 31110761 - 31110683
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||| ||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  31110761 tcttttctctactcttctctcttcctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacatt 31110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 31976348 - 31976426
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  31976348 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 6209465 - 6209381
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaa 88  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| | |||| || |||||||| | ||||||||||||||||||||    
T  6209465 tcttttctctcctcttctctcttcctaatgcatgggatgtacaaagatgta-gggaataaagggtatctatgtatcattactctaa 6209381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 4231659 - 4231726
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  4231659 ctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 15990031 - 15989964
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  15990031 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 15989964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 30341349 - 30341282
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  30341349 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30341282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 946476 - 946557
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattact 84  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||  ||||||  ||||||   |||| |||||||||||||    
T  946476 tcttttctctcctcttctctcttcctaatgcatgagatgtacaagaatgtatgacaataaaaagtgtcaatgtatcattact 946557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 31109400 - 31109351
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgt 52  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  31109400 tcttttctctcctcttttctcttcctaatgcatggggtatacaagggtgt 31109351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 15508013 - 15507946
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  | |||| | |||||||||| ||||    
T  15508013 ctcttctctcttcctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 15507946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 28536488 - 28536410
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||| ||| |||||| ||||||||| | |||||||||||||||||||||||  |||||| | |||| ||||| ||||    
T  28536488 tcttttatcttctcttccctcttcctactgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgtaacatt 28536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 30870114 - 30870184
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    ||||| ||||||||||||||||| ||| || || |||||||||| ||||||||  |||||||| |||||||    
T  30870114 tctttcctctcctcttctctctttctagtatatagggtgtacaaaggtgtatgaaaataaagggtgtctat 30870184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 31953019 - 31952952
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||| | ||||||||||| |||| ||||||  |||||| | |||||||||| ||||    
T  31953019 ctcttctctcttcctagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 33644300 - 33644383
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  33644300 tcttttctctcctcttctctcttcctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcattactct 33644383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 53982111 - 53982193
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  53982111 tcttttctctcctcttctctcttcctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcattactc 53982193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 31456789 - 31456877
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaa 91  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||||| ||| ||||||||||||||| |||||    
T  31456789 tcttttctctcctcttttctcttcctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcattactcaaaaaa 31456877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 52629400 - 52629483
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||| || ||||||||||||||||||||    
T  52629400 tcttttctctcatcttctctcttcctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactct 52629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 54868895 - 54868812
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  54868895 tcttttctctcatcttctctcttcctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 54868812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 49607514 - 49607596
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||||||||||||||| |||||||||||| ||||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  49607514 tcttttctctcctcttttctcttcctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 49607596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 11347922 - 11347844
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||| |||||||||| ||||    
T  11347922 tcttttctctcctcttctctcttcctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 36707428 - 36707347
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattact 84  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||  ||||||| |||||| | ||||||||||||||||||    
T  36707428 tcttttctctcctcttctctcttcctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcattact 36707347  T

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Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 11095356 - 11095275
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaataaa 95  Q
    ||||| |||||||||||| ||| |||||||||||||||||||  |||||||| |||||||||||||||||||| ||| ||||    
T  11095356 ctcttttctcttcctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactcttaaattaaa 11095275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 48587087 - 48587018
Alignment:
Q  17 ttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||| |||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  48587087 ttctctcttcctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcattactct 48587018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 9563103 - 9563179
Alignment:
Q  7 ttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattac 83  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||||||| |||||||| | |||||||||||||||    
T  9563103 ttctctcctcttctctcttcctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcattac 9563179  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 20764915 - 20764837
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  20764915 tcttttctctcatcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 30801733 - 30801655
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  30801733 tctttcctctcatcttctctcttcctagtacatggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 41189764 - 41189686
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||| |||||||| |||||||| |||||||||| ||||    
T  41189764 tcttttctctcctcttctttcttcctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

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Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 51419360 - 51419282
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||| | ||| |||||| ||||    
T  51419360 tcttttctctcctattctctcttcctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 26141532 - 26141452
Alignment:
Q  3 tcttttctctcctcttct--ctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||  |||||||||||  |||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  26141532 tcttttctctcctcttctttctcttcctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 17470505 - 17470589
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactcta 87  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||   ||||||  |||||| | |||||||||||||||||||||    
T  17470505 tcttttctctcatcttctctcttcctaatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcattactcta 17470589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 27714892 - 27714822
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattact 84  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||  ||| ||||||||||||||    
T  27714892 ctcttctctcttcccaatacatggggtgtacaagggtgtacgagaataaagagtgtatatgtatcattact 27714822  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 36331318 - 36331277
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36331318 ctcttctctcttcctaatacatggggtgtacaagggtgtatg 36331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 33118851 - 33118772
Alignment:
Q  3 tcttttctctcctc-ttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||| |||||||| |||| | |||||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  33118851 tctttcctctcctccttctctctccctagtgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacatt 33118772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 42823222 - 42823289
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | |||| | |||||||||| ||||    
T  42823222 ctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 42823289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 45058542 - 45058475
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||||||||||||||| ||||||||  | |||| | |||||||||| ||||    
T  45058542 ctcttctctcttcctaatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgtaacatt 45058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 8076493 - 8076571
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||  |||||||  |||||| | |||||||||| ||||    
T  8076493 tctttcctctcctcttctctcttcctagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 26754795 - 26754873
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||||||||||||||  | || |||||||||| ||||||||| |||||||  |||||||||| ||||    
T  26754795 tctttcctctcctcttctctcttcctagaatatagggtgtacaaaggtgtatggaaataaagagtgtctatgtaacatt 26754873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 47531965 - 47532043
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||| |||||||||||||||  ||||  |||||||| |||||||| |||||||| ||| |||||| ||||    
T  47531965 tcttttctctcctattctctcttcctaatgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacatt 47532043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 48375706 - 48375628
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||||||||||||||  | || |||||||||| | ||||||| |||||||| |||||||||| ||||    
T  48375706 tctttcctctcctcttctctcttcctagaatatagggtgtacaaagatgtatggaaataaagggtgtctatgtaacatt 48375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 35536737 - 35536804
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||| | ||||||||||| |||||||||||  |||||| | |||||||||| ||||    
T  35536737 ctcttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 35965782 - 35965704
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||| ||| ||| |||| |||| ||||||||||||||||||  |||||| | |||||||||| ||||    
T  35965782 tctttcctctcctcttttcttttcttaattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 39670111 - 39670184
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgta 76  Q
    |||||||||||||||||||||||| ||||  ||| | |||||||||||||| || |||||| | ||||| ||||    
T  39670111 tcttttctctcctcttctctcttcttaatgtatgagatgtacaagggtgtacggaaataaatgatgtctgtgta 39670184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 43746446 - 43746517
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||| |||||||| | |||| ||||||||||||||||||  || ||||| ||| |||||| ||||    
T  43746446 tctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatt 43746517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 21746181 - 21746115
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgta 76  Q
    |||| ||||||||||||| |||| ||| ||||||||||||||||||  |||||| | |||| |||||    
T  21746181 tctcatcttctctcttccaaatatatgaggtgtacaagggtgtatgtaaataaatgatgtccatgta 21746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 1758449 - 1758405
Alignment:
Q  10 tctcctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||    
T  1758449 tctcctcttctctcttcctaatgcat-gggtgtacaaaggtgtatg 1758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 10109 - 10026
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  10109 tcttttctctcctcttctctcttcctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactct 10026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 4129 - 4212
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  4129 tcttttctcttctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactct 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 2740374 - 2740457
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  2740374 tcttttctctccccttctctcttcctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 2740457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 33149638 - 33149555
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  33149638 tcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactct 33149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 35785299 - 35785381
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  35785299 tcttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactc 35785381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 14831916 - 14831996
Alignment:
Q  5 ttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  14831916 ttttttctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 14831996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 18520884 - 18520796
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactctaaaaa 91  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||  |||||||| |||||||||||||||||||| ||||    
T  18520884 tcttttatctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactcttaaaa 18520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 40145507 - 40145590
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  40145507 tcttttctctcctcttctctcttcctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattactct 40145590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 36732942 - 36732872
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||||||    
T  36732942 tcttttctctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 15409610 - 15409532
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||  |||||||| ||| |||||| ||||    
T  15409610 tcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacatt 15409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 6679798 - 6679876
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||  |||||| | |||||||||| ||||    
T  6679798 tcttttctctcctcttctctcttcctaatgtatagggtgtacaagggtgtatgacaataaatgatgtctatgtaacatt 6679876  T

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Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 13811752 - 13811826
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtat 77  Q
    |||| |||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||| | |||||||||||    
T  13811752 tcttctctctcctcttctctcttcctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

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Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 36875612 - 36875564
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtg 51  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36875612 tcttttttctcctcttctctcttcctaatacatggggtgtacaagggtg 36875564  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 35943892 - 35943814
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||| |||||||||| | |||||||||||||||||||||||| ||||||   |||||||||| ||||    
T  35943892 tctttcctctcctcttttctcttcctagtgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatt 35943814  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 31009094 - 31009166
Alignment:
Q  9 ctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||| |||||||||||||||| | |||||||||||||| ||||||||  |||||||| |||||||||| ||||    
T  31009094 ctcttctcttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

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Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 31132448 - 31132516
Alignment:
Q  17 ttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcattactc 85  Q
    ||||||||| ||||| |||| ||||||||||||||||||  |||||||| ||| |||||||||||||||    
T  31132448 ttctctctttctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcattactc 31132516  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 2252157 - 2252090
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  2252157 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 2252090  T

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Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 3921254 - 3921187
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |||| | |||||||||| ||||    
T  3921254 ctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 3921187  T

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Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 26720616 - 26720686
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||||||||| ||||||||||||||||||  ||||||||||| ||||||||||  |||||| | |||||||    
T  26720616 tcttttctcttctcttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctat 26720686  T

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Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 26990365 - 26990435
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctat 73  Q
    |||||||||| ||||||||||||||||||  ||||||||||| ||||||||||  |||||| | |||||||    
T  26990365 tcttttctcttctcttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctat 26990435  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 39557517 - 39557475
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtaca 45  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  39557517 tcttttatctcctcttctctcttcctaatacatgaggtgtaca 39557475  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 39688885 - 39688819
Alignment:
Q  15 tcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||||||||||||||||||| |||||||||| ||||||||  | |||| | |||||||||| ||||    
T  39688885 tcttctctcttcctaatacatagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacatt 39688819  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 2177464 - 2177516
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatg 55  Q
    ||||| ||||||||||||||||||||| | ||| || ||||||||||||||||    
T  2177464 tctttcctctcctcttctctcttcctagtgcattggatgtacaagggtgtatg 2177516  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 16115296 - 16115249
Alignment:
Q  39 gtgtacaagggtgtatggtaataaaggttgtctatgtatcattactct 86  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactct 16115249  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 33825324 - 33825246
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||| ||| |||||||||||||||| | ||||||||||| |||| ||||||  |||||| | |||| ||||| ||||    
T  33825324 tcttttatcttctcttctctcttcctagtgcatggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacatt 33825246  T

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Target: scaffold1268 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 929 - 851
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||| ||| |||||| ||||    
T  929 tctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

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Target: scaffold1267 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 929 - 851
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||| ||| |||||| ||||    
T  929 tctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatt 851  T

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Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 17203 - 17281
Alignment:
Q  3 tcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    ||||| |||||||||||||||||||||  | ||  ||||||||| ||||||||| |||||||| |||||||||| ||||    
T  17203 tctttcctctcctcttctctcttcctagaatataaggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 17281  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 8851 - 8785
Alignment:
Q  15 tcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||||||||| |||||||||||||||||||||   |||||| | |||||||||| ||||    
T  8851 tcttctctcttcctaatatatggggtgtacaagggtgtataagaataaaaggtgtctatgtaacatt 8785  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 152609 - 152676
Alignment:
Q  14 ctcttctctcttcctaatacatggggtgtacaagggtgtatggtaataaaggttgtctatgtatcatt 81  Q
    |||||||||||| |||||||||||| ||||||||||||||||  | |||| | |||||||||| ||||    
T  152609 ctcttctctctttctaatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 152676  T

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