View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3374_high_15 (Length: 229)

Name: NF3374_high_15
Description: NF3374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3374_high_15
NF3374_high_15
[»] chr4 (41 HSPs)
chr4 (1-229)||(372082-372310)
chr4 (4-229)||(40703827-40704050)
chr4 (11-196)||(54631280-54631465)
chr4 (4-229)||(48318845-48319068)
chr4 (4-196)||(19835714-19835906)
chr4 (4-179)||(25752224-25752399)
chr4 (11-188)||(6003461-6003638)
chr4 (11-196)||(7931851-7932035)
chr4 (11-229)||(25491183-25491399)
chr4 (11-199)||(46440060-46440250)
chr4 (4-196)||(17932918-17933110)
chr4 (11-195)||(29822775-29822959)
chr4 (4-229)||(53893807-53894029)
chr4 (6-190)||(2505814-2505998)
chr4 (11-229)||(25538766-25538983)
chr4 (4-196)||(31582211-31582395)
chr4 (4-179)||(38536382-38536557)
chr4 (4-188)||(34973066-34973250)
chr4 (11-184)||(49001343-49001521)
chr4 (97-196)||(52089379-52089478)
chr4 (11-224)||(32441978-32442189)
chr4 (4-190)||(14473996-14474179)
chr4 (6-147)||(18050972-18051113)
chr4 (11-196)||(27741901-27742086)
chr4 (6-78)||(37222277-37222348)
chr4 (4-188)||(6228594-6228778)
chr4 (5-84)||(48629348-48629427)
chr4 (4-62)||(5803209-5803267)
chr4 (16-62)||(52089582-52089628)
chr4 (9-190)||(47456800-47456986)
chr4 (8-58)||(53836069-53836119)
chr4 (109-225)||(7863608-7863722)
chr4 (145-190)||(37222161-37222206)
chr4 (129-221)||(46381074-46381164)
chr4 (12-84)||(3703044-3703116)
chr4 (97-196)||(55052492-55052592)
chr4 (11-62)||(38417119-38417170)
chr4 (146-199)||(1788185-1788238)
chr4 (6-79)||(25140592-25140664)
chr4 (146-226)||(27879714-27879792)
chr4 (11-59)||(32601169-32601217)
[»] chr8 (34 HSPs)
chr8 (4-188)||(36980763-36980947)
chr8 (4-229)||(42280672-42280895)
chr8 (4-196)||(3094871-3095063)
chr8 (4-196)||(11698097-11698289)
chr8 (4-229)||(8885233-8885457)
chr8 (11-229)||(28916930-28917146)
chr8 (4-229)||(34853483-34853706)
chr8 (11-225)||(36317955-36318167)
chr8 (4-188)||(31519675-31519857)
chr8 (101-229)||(27927819-27927945)
chr8 (4-224)||(28423581-28423799)
chr8 (6-79)||(33472280-33472353)
chr8 (11-79)||(9845395-9845462)
chr8 (13-196)||(40328083-40328266)
chr8 (11-190)||(7981706-7981887)
chr8 (106-180)||(8621520-8621594)
chr8 (97-229)||(36165711-36165842)
chr8 (97-190)||(9073696-9073789)
chr8 (100-196)||(17119756-17119852)
chr8 (6-79)||(31234604-31234678)
chr8 (106-178)||(40392740-40392812)
chr8 (117-196)||(6395270-6395349)
chr8 (4-55)||(10840534-10840585)
chr8 (11-229)||(14163845-14164061)
chr8 (106-172)||(1076765-1076831)
chr8 (102-196)||(34645563-34645657)
chr8 (106-199)||(21004567-21004660)
chr8 (4-57)||(27927731-27927784)
chr8 (144-196)||(44106409-44106461)
chr8 (4-55)||(4259463-4259514)
chr8 (11-62)||(40994990-40995041)
chr8 (21-79)||(41530885-41530942)
chr8 (147-229)||(4259561-4259639)
chr8 (11-79)||(24627992-24628059)
[»] chr5 (43 HSPs)
chr5 (4-229)||(14111984-14112205)
chr5 (4-229)||(37183562-37183785)
chr5 (4-196)||(32841752-32841943)
chr5 (97-196)||(38871819-38871918)
chr5 (4-229)||(6156848-6157071)
chr5 (11-225)||(38692570-38692783)
chr5 (4-196)||(31928906-31929098)
chr5 (11-196)||(20891761-20891945)
chr5 (11-229)||(31221127-31221343)
chr5 (109-229)||(13908665-13908783)
chr5 (11-196)||(26898591-26898776)
chr5 (11-196)||(39524924-39525109)
chr5 (4-179)||(33487776-33487951)
chr5 (11-189)||(15799380-15799558)
chr5 (6-79)||(16429244-16429317)
chr5 (4-196)||(7884341-7884534)
chr5 (97-196)||(26622260-26622357)
chr5 (11-179)||(15957914-15958082)
chr5 (106-188)||(33901115-33901197)
chr5 (4-190)||(27158238-27158424)
chr5 (6-196)||(27212852-27213041)
chr5 (15-173)||(38372472-38372630)
chr5 (97-196)||(4064593-4064693)
chr5 (115-199)||(12465011-12465095)
chr5 (4-60)||(26093743-26093799)
chr5 (101-190)||(6800805-6800894)
chr5 (4-221)||(11185968-11186171)
chr5 (97-225)||(23269458-23269584)
chr5 (4-161)||(26190103-26190260)
chr5 (97-229)||(28083252-28083382)
chr5 (4-78)||(5456322-5456396)
chr5 (4-62)||(40619766-40619824)
chr5 (20-79)||(8739079-8739138)
chr5 (145-179)||(26093621-26093655)
chr5 (11-81)||(28445287-28445356)
chr5 (21-79)||(38641106-38641163)
chr5 (6-79)||(38640898-38640970)
chr5 (4-58)||(26622404-26622458)
chr5 (17-62)||(12464912-12464957)
chr5 (4-77)||(21070632-21070705)
chr5 (97-225)||(24203558-24203684)
chr5 (144-184)||(12847603-12847643)
chr5 (11-75)||(43387948-43388011)
[»] chr3 (45 HSPs)
chr3 (4-199)||(51258587-51258782)
chr3 (4-229)||(35345690-35345913)
chr3 (4-229)||(35142229-35142451)
chr3 (4-190)||(46622576-46622762)
chr3 (11-199)||(3902594-3902782)
chr3 (4-229)||(34821124-34821347)
chr3 (11-179)||(28873209-28873377)
chr3 (11-179)||(50716456-50716624)
chr3 (11-179)||(50796223-50796391)
chr3 (4-228)||(39149965-39150180)
chr3 (4-211)||(47302192-47302397)
chr3 (11-229)||(3351854-3352070)
chr3 (97-179)||(33439384-33439466)
chr3 (11-199)||(14828704-14828895)
chr3 (4-84)||(29048628-29048708)
chr3 (97-196)||(46624906-46625005)
chr3 (17-229)||(43472762-43472973)
chr3 (6-147)||(4394214-4394355)
chr3 (11-62)||(500974-501025)
chr3 (4-188)||(3938376-3938560)
chr3 (97-196)||(47123212-47123311)
chr3 (97-196)||(47130578-47130677)
chr3 (11-79)||(34009882-34009950)
chr3 (4-188)||(2358403-2358587)
chr3 (4-229)||(38977528-38977752)
chr3 (24-79)||(45711886-45711941)
chr3 (4-62)||(33439507-33439565)
chr3 (6-79)||(45244600-45244672)
chr3 (101-229)||(52777386-52777512)
chr3 (103-179)||(5127779-5127855)
chr3 (4-84)||(29036102-29036182)
chr3 (134-174)||(40062283-40062323)
chr3 (11-59)||(51816537-51816585)
chr3 (97-196)||(49096100-49096199)
chr3 (9-79)||(32025188-32025256)
chr3 (144-221)||(40062542-40062617)
chr3 (11-57)||(41300935-41300981)
chr3 (144-229)||(51540535-51540618)
chr3 (200-229)||(512223-512252)
chr3 (12-65)||(4300066-4300118)
chr3 (11-84)||(19419716-19419789)
chr3 (157-229)||(47769417-47769487)
chr3 (4-73)||(51540408-51540477)
chr3 (158-190)||(27143291-27143323)
chr3 (158-190)||(27143351-27143383)
[»] chr7 (42 HSPs)
chr7 (4-197)||(7115050-7115244)
chr7 (4-199)||(36468320-36468513)
chr7 (4-179)||(42925421-42925596)
chr7 (11-196)||(19225386-19225571)
chr7 (11-196)||(19818566-19818750)
chr7 (4-229)||(9151951-9152169)
chr7 (97-196)||(3936294-3936393)
chr7 (28-196)||(33151389-33151556)
chr7 (97-225)||(1518866-1518992)
chr7 (4-229)||(43737237-43737460)
chr7 (11-196)||(36629389-36629574)
chr7 (4-175)||(37518044-37518215)
chr7 (4-229)||(42864882-42865106)
chr7 (11-84)||(43186083-43186156)
chr7 (97-190)||(26555031-26555124)
chr7 (4-188)||(8155093-8155277)
chr7 (4-188)||(31643235-31643418)
chr7 (6-79)||(16278316-16278389)
chr7 (4-60)||(24041978-24042034)
chr7 (106-229)||(36408526-36408647)
chr7 (4-79)||(30861386-30861461)
chr7 (97-196)||(36946166-36946265)
chr7 (97-196)||(37398765-37398864)
chr7 (4-74)||(32701041-32701111)
chr7 (4-62)||(33573829-33573887)
chr7 (4-62)||(47202807-47202865)
chr7 (11-62)||(3304539-3304590)
chr7 (11-78)||(5731067-5731133)
chr7 (11-196)||(24690124-24690307)
chr7 (137-199)||(39581922-39581984)
chr7 (106-180)||(48776092-48776166)
chr7 (6-79)||(8214377-8214450)
chr7 (145-196)||(6467062-6467113)
chr7 (4-55)||(26554944-26554995)
chr7 (147-229)||(28230392-28230472)
chr7 (11-62)||(47239506-47239557)
chr7 (4-62)||(48705780-48705838)
chr7 (106-179)||(3304641-3304714)
chr7 (145-229)||(5278419-5278501)
chr7 (4-57)||(6466918-6466971)
chr7 (144-229)||(31985438-31985521)
chr7 (4-48)||(28230273-28230317)
[»] chr6 (28 HSPs)
chr6 (4-229)||(21514812-21515035)
chr6 (4-229)||(4508083-4508306)
chr6 (4-229)||(3717063-3717287)
chr6 (4-179)||(2813003-2813180)
chr6 (11-229)||(2539606-2539822)
chr6 (97-229)||(5699720-5699851)
chr6 (97-196)||(13800901-13801000)
chr6 (6-229)||(24604144-24604365)
chr6 (8-229)||(14587346-14587564)
chr6 (11-68)||(237112-237169)
chr6 (144-221)||(14037886-14037958)
chr6 (11-58)||(5639185-5639232)
chr6 (11-62)||(5699918-5699969)
chr6 (11-57)||(9905388-9905434)
chr6 (106-196)||(34528626-34528716)
chr6 (137-229)||(10310345-10310435)
chr6 (11-79)||(16450521-16450589)
chr6 (11-196)||(17264596-17264780)
chr6 (97-189)||(29289499-29289591)
chr6 (144-196)||(29519465-29519517)
chr6 (6-57)||(1945365-1945416)
chr6 (105-196)||(3365851-3365942)
chr6 (158-225)||(236953-237018)
chr6 (97-161)||(7412971-7413035)
chr6 (106-188)||(9905309-9905391)
chr6 (97-179)||(23407000-23407082)
chr6 (6-79)||(17501291-17501363)
chr6 (11-59)||(14037753-14037801)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-229)||(9279-9501)
[»] chr1 (38 HSPs)
chr1 (4-229)||(41584446-41584669)
chr1 (11-196)||(52744631-52744816)
chr1 (13-196)||(34006447-34006630)
chr1 (4-178)||(40907715-40907889)
chr1 (11-196)||(45046638-45046823)
chr1 (4-199)||(28866411-28866606)
chr1 (4-226)||(38885371-38885591)
chr1 (11-196)||(6223541-6223724)
chr1 (4-188)||(18583325-18583509)
chr1 (97-229)||(15069716-15069845)
chr1 (4-196)||(42546153-42546345)
chr1 (4-196)||(24472609-24472800)
chr1 (11-196)||(3561123-3561308)
chr1 (4-188)||(33611191-33611375)
chr1 (11-62)||(49677783-49677834)
chr1 (97-229)||(25563288-25563418)
chr1 (97-229)||(49677638-49677768)
chr1 (11-79)||(800681-800748)
chr1 (6-229)||(27794986-27795206)
chr1 (97-229)||(7011365-7011495)
chr1 (6-79)||(43319068-43319140)
chr1 (101-224)||(42929044-42929165)
chr1 (101-229)||(45567768-45567894)
chr1 (101-188)||(23442932-23443019)
chr1 (97-184)||(26723362-26723449)
chr1 (97-179)||(17000582-17000664)
chr1 (4-62)||(41584362-41584420)
chr1 (6-79)||(9445972-9446044)
chr1 (144-196)||(45880030-45880082)
chr1 (4-188)||(49786462-49786646)
chr1 (12-62)||(8704307-8704357)
chr1 (97-179)||(34162595-34162677)
chr1 (147-229)||(44573021-44573101)
chr1 (4-48)||(40650485-40650529)
chr1 (97-196)||(40650549-40650648)
chr1 (11-58)||(44572888-44572935)
chr1 (11-79)||(38131188-38131256)
chr1 (11-79)||(43318862-43318929)
[»] chr2 (40 HSPs)
chr2 (1-229)||(30763804-30764031)
chr2 (4-196)||(42894563-42894755)
chr2 (11-199)||(34517284-34517474)
chr2 (4-190)||(38065353-38065539)
chr2 (97-221)||(35251093-35251215)
chr2 (4-196)||(33452218-33452411)
chr2 (6-226)||(38308610-38308829)
chr2 (6-229)||(41510207-41510428)
chr2 (4-155)||(27670723-27670874)
chr2 (97-229)||(32187738-32187868)
chr2 (97-229)||(39447317-39447447)
chr2 (97-196)||(19109884-19109983)
chr2 (4-229)||(15994895-15995112)
chr2 (4-179)||(25217550-25217725)
chr2 (97-229)||(41203055-41203185)
chr2 (4-196)||(41854679-41854872)
chr2 (11-229)||(5507574-5507791)
chr2 (11-190)||(33440293-33440472)
chr2 (99-196)||(16750300-16750397)
chr2 (101-196)||(36875171-36875266)
chr2 (4-82)||(17133025-17133103)
chr2 (4-58)||(32187660-32187714)
chr2 (4-62)||(44465516-44465574)
chr2 (6-79)||(9847292-9847364)
chr2 (4-57)||(17474574-17474627)
chr2 (7-196)||(45293826-45294004)
chr2 (11-62)||(39447477-39447528)
chr2 (145-229)||(45153708-45153790)
chr2 (105-196)||(13704689-13704781)
chr2 (11-62)||(11457272-11457323)
chr2 (7-58)||(27900392-27900443)
chr2 (4-58)||(16750220-16750274)
chr2 (147-196)||(37773735-37773784)
chr2 (144-228)||(44465643-44465725)
chr2 (144-196)||(26228252-26228304)
chr2 (6-79)||(9847084-9847156)
chr2 (144-196)||(8388837-8388889)
chr2 (11-59)||(24477054-24477102)
chr2 (11-79)||(25715764-25715831)
chr2 (28-84)||(34817404-34817460)
[»] scaffold0010 (1 HSPs)
scaffold0010 (11-229)||(140640-140857)
[»] scaffold0564 (1 HSPs)
scaffold0564 (11-229)||(4526-4742)
[»] scaffold0508 (1 HSPs)
scaffold0508 (4-196)||(3174-3368)
[»] scaffold0027 (2 HSPs)
scaffold0027 (97-178)||(141838-141919)
scaffold0027 (5-55)||(141776-141826)
[»] scaffold0018 (1 HSPs)
scaffold0018 (11-62)||(174149-174200)
[»] scaffold0182 (1 HSPs)
scaffold0182 (4-56)||(23299-23351)
[»] scaffold0016 (2 HSPs)
scaffold0016 (11-79)||(205687-205754)
scaffold0016 (6-59)||(205893-205945)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 372310 - 372082
Alignment:
Q  1 aatatgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttc 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||    
T  372310 aatatgggtttaaacgatgatattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgatttttttgtgagtttc 372211  T
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgag 200  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  372210 tgggaaagtttcgtagcaatccaattaattagtctgaaaattggatttttgactaagaagaactaacaatgacccaaaacagaaggatgaaaattatgag 372111  T
Q  201 aatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||||||||||||||||    
T  372110 aatattaatatggtctttaaaatgactat 372082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 40704050 - 40703827
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||| ||| |||||| || || ||||        ||| |||||||    
T  40704050 atgggtttaaacgatggaattttagattttgaggggcggagtcccgtaagaagttccttctaatgaagtcatggtccttgaattttttctgattttctgg 40703951  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | ||||||| |||||||||||| || |||||  |||| | |||||||||||||||| |  |||||||||||||||| |||||||||| |||||   |||     
T  40703950 ggaagtttcttagcaatccgatcaagtagtccaaaaacccgatttttgactaagaaaagataacaatgacccaaaacagaaggatgagagtta--ggaag 40703853  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  40703852 attaatattgtccctaaaatgactat 40703827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 54631280 - 54631465
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||| || || || |||| || || ||||        ||| |||||||| |||||    
T  54631280 taaacgatggaattttgtattttgaggtgcggagtcccgtaagaagtcctttctatgggagtcatggtccttgaattttttctgattttctggggaagtt 54631379  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | | ||||||||||| || ||||| ||||| | ||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  54631380 ttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagtta 54631465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 48318845 - 48319068
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||  | |  |||| || || ||||        ||| |||||||    
T  48318845 atgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttccaggagagtcatggtccttgaattttttctgattttctgg 48318944  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | || ||||| ||||||||||| || ||||| ||||||| ||||||| |||||||| |  |||||||||||||||| |||||||||| |||||   |||     
T  48318945 ggaaatttcgaagcaatccgatcaagtagtccgaaaatccgattttttactaagaatagataacaatgacccaaaacagaaggatgagagtta--ggaag 48319042  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  48319043 attaatattgtccctaaaatgactat 48319068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 19835906 - 19835714
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||| || || |||| || |  ||||        ||| |||||||    
T  19835906 atgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtcccttttaggggagtcatggtacttgaattttttctgattttctgg 19835807  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||||| ||||||||||| || ||||| ||||| | || |||||||||| ||||  |||||||||| ||||| |||| ||||| |||||    
T  19835806 gaaagtttcggagcaatccgatcaagtagtccgaaaacccgacttttgactaaaaacaggtaacaatgacgcaaaacagaaagatgagagtta 19835714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 25752224 - 25752399
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||| |||| || || ||||        ||| |||||||    
T  25752224 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatggtccttgaatcttttctgattttctgg 25752323  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    | |||||||| ||||||| ||| || ||| | ||||| | ||||||||||||||||||  ||||||| ||||||||    
T  25752324 ggaagtttcggagcaatctgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatcacccaaaa 25752399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 6003461 - 6003638
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||| || |||||||| ||||||||||| |||||||||||||||| ||||| || ||||||| || |||||||        ||| ||| ||||||||||    
T  6003461 taaacaatagaattttggattttgaggggcggagtcccgtaagaagccccttttatggaagtcatggtctttgaattttttctgattttttgggaaagtt 6003560  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    ||  |||||||| || || ||| | ||||| | ||||||||||||||||||| |||||||||||||||| | ||||||    
T  6003561 tcagagcaatccaatcaagtagcccgaaaacctgatttttgactaagaacaagtaacaatgacccaaaacaaaaggat 6003638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 7932035 - 7931851
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||| || || |||| || || ||||        ||| ||||||||||||||    
T  7932035 taaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttctgggaaagtt 7931936  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||  || ||||| |||||   |||||||||| || ||||  |||||||||||||||| || ||||||| |||||    
T  7931935 tcgaagcaatccgaccaagtagtccgaaaactcgatttttgaccaaaaacatgtaacaatgacccaaaacag-aggatgagagtta 7931851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 25491183 - 25491399
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||  ||| |||| | ||||||||||| ||||| |||| || || ||||        ||| |||||||| || ||    
T  25491183 taaacgatggaattttggattttgagggacggaatcccttgagaagtcccttctaagggagtcatggtccttgaactttttctgattttctggggaaatt 25491282  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    | | ||||||||||| || |||||  |||| | ||||||||||||||||||  |||||||||||||||| |||||||||| |||||   ||| |||||||    
T  25491283 ttggagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagtta--ggaagattaata 25491380  T
Q  211 tggtctttaaaatgactat 229  Q
    | |||  ||||||||||||    
T  25491381 ttgtccataaaatgactat 25491399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 46440060 - 46440250
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |  || |||| || || ||||        ||| |||||||| |||||    
T  46440060 taaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctttgggagtcatggtccttgaattttttctgattttctggggaagtt 46440159  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaaga--acaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||| ||||||||||| || ||||| ||||||| ||||||||| |||||  |||  ||||||||| | |||| |||||||||| ||||||||    
T  46440160 tcggagcaatccgatcaagtagtccgaaaatccgatttttgattaagaacacaggtaacaatgatctaaaagagaaggatgagagttatga 46440250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 17932918 - 17933110
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| |||||||| || ||| || | |||||||| | || ||||| |||| || || ||||        ||| |||||||    
T  17932918 atgggtctaaactatggaattttggattttgagaggcggaatctcttaagaagttctttctaagggagtcatggtccttgaattttttctgattttctgg 17933017  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
      |||||||| ||||||||||| || | ||||||||||| ||||||| ||||||||||  |||||||||||||||| |||||||||| |||||    
T  17933018 agaagtttcggagcaatccgatcaagtggtctgaaaatctgattttttactaagaacaggtaacaatgacccaaaacagaaggatgagagtta 17933110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 29822959 - 29822775
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||| || || |||| || || ||||        ||| | |||||| |||||    
T  29822959 taaacgatggaattttgaattttgaggggcagagtcccgtaggaagtcccttctacgggagtcatggtccttgaattttttctgattgtctgggcaagtt 29822860  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtt 195  Q
    |   ||||||||||| || ||| | |||||||  |||||||| ||||||||  |||||||||||||||| |||||||||| ||||    
T  29822859 tttgagcaatccgatcaagtagcccgaaaatccaatttttgattaagaacatgtaacaatgacccaaaacagaaggatgagagtt 29822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 53893807 - 53894029
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||||||| |||| ||| ||||||||||||| || || |||  || || |  |        ||| ||||| |    
T  53893807 atgggtctaaacgatgaaattttggattttgaggggcggagacccataagaagtcccttctacgggagtgatggtcctgaaattttttctgattttctcg 53893906  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    ||| |||||  ||||||||||| || ||||||||||| | ||||||||||||||||||  |||||||||||||||| |||||||||| ||||| || ||     
T  53893907 gaa-gtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagtta-ga-aag 53894003  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  53894004 attaatattgtccctaaaatgactat 53894029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 2505814 - 2505998
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| |||||||| |||||||| |||||||||||  || |||||||||||||||||| |  || |||| || || ||||        ||  |||||| ||    
T  2505814 gggtgtaaacgatagaattttggattttgaggggcagaatcccgtaagaagtcccttcttggggagtcatggtccttgaatgttttctgcttttctgaga 2505913  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||||| ||||||||||| || ||| | ||||| | |||| |||||||||||||  |||||||||||||||| ||||||||||    
T  2505914 aagtttcggagcaatccgatcaagtagcccgaaaacccgattattgactaagaacatgtaacaatgacccaaaacagaaggatga 2505998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 25538766 - 25538983
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||| ||| ||||| |||| || || ||||        ||| |||||||| | |||    
T  25538766 taaacgatggtattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatgttccttgaaatttttctgattttctggggatgtt 25538865  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgaccc-aaaatagaaggatgaaagttatgagaatattaat 209  Q
    ||| || ||||| || || ||| ||||||| |  ||||||||||||||| |  |||||||||||| ||||  ||||||||| |||||  |||| ||||||    
T  25538866 tcggagaaatccaatcaagtagcctgaaaaccaaatttttgactaagaagaggtaacaatgacccaaaaacggaaggatgagagtta--agaaaattaat 25538963  T
Q  210 atggtctttaaaatgactat 229  Q
    || |||  ||||||||||||    
T  25538964 attgtccctaaaatgactat 25538983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 31582211 - 31582395
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||| |||   |||||||||||| ||||||| || || |||||||            |||||||    
T  31582211 atgggtctaaacgatggaattttggattttgaggggcggaatccaa-aagaagtcccttctaaggaaatcatggtctttgaatttt-------tttctgg 31582302  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| ||||||||||| || ||| | |||||   ||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  31582303 gcaagtttcggagcaatccgatcaattagcccgaaaactagatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagtta 31582395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 38536557 - 38536382
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||||| || ||| | |||  || || ||||        ||| |||||||    
T  38536557 atgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcctttctaaaggagttatggtccttgaattttttctgattttctgg 38536458  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||| | | ||||||||| || ||| |||||||   ||||||||||||||||||  ||||||||||| ||||    
T  38536457 gaaagttttggaacaatccgatcaagtagcctgaaaacttgatttttgactaagaacatgtaacaatgacctaaaa 38536382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 34973250 - 34973066
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||| |||||||||||| || |  |||| || || ||||        | | ||| | |    
T  34973250 atgggtctaaacaatggaattttggattttgaggggcggagtcccgaaagaagtcccttttaggagagtcatggtccttgaattttttctaattttatag 34973151  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||||||||||| | ||||||||||||||||||  ||||||||||| |||| | ||||||    
T  34973150 ggaagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacagataacaatgacctaaaacaaaaggat 34973066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 49001343 - 49001521
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc-----tttgannnnnnngtgagtttctggga 105  Q
    ||||||||| ||||||| ||||||||| | |||||||||||||||||||||| ||||| |||| |||||     |||          ||| |||||||      
T  49001343 taaacgatgtaattttggattttgaggagcggagtcccgtaagaagtcccttctaagggagtcatgatccttgttttttttttcttctgattttctggag 49001442  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaa 184  Q
    || ||||| ||||||||||| || ||| | ||||||| |||||||||||| |||||  |||||||||||||||||||||    
T  49001443 aattttcggagcaatccgatcaagtagcccgaaaatcagatttttgactatgaacagttaacaatgacccaaaatagaa 49001521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 52089478 - 52089379
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||| | ||||||||||| || |||||  |||| | ||||||||||||||||||  |||||||||||||||  ||||| ||||||||||    
T  52089478 tttctggggaagttttgaagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacccaaaccagaagaatgaaagtta 52089379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 32442189 - 32441978
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||| ||| ||||||  ||||||||||| | | |||| ||||||||| ||| ||||| |||| || || ||||        ||| |||||||| |||||    
T  32442189 taaacaatgaaattttttattttgaggggcgaaatcccataagaagtctcttctaagggagtcatggtccttgaattttttctgattttctggggaagtt 32442090  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    ||  ||||||||||| || ||| | |||||   ||||||||||||||||||  |||||||||||||||| | |||||| | |||||   ||| |||||||    
T  32442089 tcagagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacaggtaacaatgacccaaaacaaaaggataagagtta--ggaagattaata 32441992  T
Q  211 tggtctttaaaatg 224  Q
    | ||||||||||||    
T  32441991 ttgtctttaaaatg 32441978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 14473996 - 14474179
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt-ataaggaagt-cttgatctttgannnnnnngtgagtttct 101  Q
    |||||| ||||||||| ||||||| || |||||||| ||||||||||||||||||||||  || || ||| |||||| |||          ||| |||||    
T  14473996 atgggtctaaacgatgaaattttggatcttgaggggcggagtcccgtaagaagtcccttcctatgggagtccttgattttt-----tttcctgattttct 14474090  T
Q  102 gggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |  ||||||||| ||||||||||| || |||  ||||||  ||||||||||  |||||||  ||||||||||| |||||||||||||||    
T  14474091 gaaaaagtttcggagcaatccgatcaagtagcttgaaaacaggatttttgatcaagaacaggtaacaatgacctaaaatagaaggatga 14474179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 18050972 - 18051113
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||||||||||||||| ||||||||||| ||| |||||||| |||| |||| || || |||| || || ||||        ||| |||||||||    
T  18050972 gggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctggga 18051071  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatt 147  Q
    |||||||| ||||||| ||| || ||||| ||||||| ||||    
T  18051072 aagtttcggagcaatctgatcaagtagtccgaaaatccgatt 18051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 27741901 - 27742086
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||| ||||||||||| ||||||||||| |||||||| |||||||| |||| || || || | ||||| |  |        ||| |||| ||| | |||    
T  27741901 taaacaatggaattttggattttgaggggcggagtcccataagaagttccttctacgggaggcatgatcctccaattttttctgattttcgggggatgtt 27742000  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| |||||||||||||| ||| | ||||| | |||||||||||||||| |  || ||||||| ||||| |||||||||| |||||    
T  27742001 tcggagcaatccgattaagtagcccgaaaacccgatttttgactaagaaaatgtaccaatgactcaaaacagaaggatgagagtta 27742086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 37222348 - 37222277
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgat 78  Q
    |||| |||||| |||||||||| |||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  37222348 gggtctaaacgttggaattttggattttgaggggaggagtctcgtaagaagttccttctaagg-agtcttgat 37222277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 6228594 - 6228778
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||| |||| || || |||| || |  ||||        ||| ||| | |    
T  6228594 atgggtctaaacaatggaattttggattttgaggggaggagtcctgtaagaagttccttctacgggagtcatggttcttgaattttttctgatttttttg 6228693  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | ||||||   ||||||||||| || ||| | ||||| |  |||||||||||||||||  |||||||||||||||| | ||||||    
T  6228694 ggaagttttagagcaatccgatcaaatagcccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggat 6228778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 48629348 - 48629427
Alignment:
Q  5 tgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    ||||| |||| ||||||||||| |||||||||||| ||| || ||||||||||||||| ||| | |||||| ||||||||    
T  48629348 tgggtctaaatgatggaattttaaattttgaggggcggaatctcgtaagaagtcccttctaatgtagtcttaatctttga 48629427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 5803209 - 5803267
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||    
T  5803209 atgggtctaaacgatggaattttgaattttgtggggtggagtcccataagaagttcctt 5803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 52089628 - 52089582
Alignment:
Q  16 gatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  52089628 gatggaattttggattttgaggggcggagtcccgtaagaagtccctt 52089582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 47456986 - 47456800
Alignment:
Q  9 tttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga-----nnnnnnngtgagtttctgg 103  Q
    ||||||||||||||||||| ||||||||||  ||||| || ||||||||| ||| ||  | |||||||||| ||||             ||| |||||||    
T  47456986 tttaaacgatggaattttggattttgagggacggagttccataagaagtctcttctagaggagtcttgatccttgatttttttttcttctgattttctgg 47456887  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    | |||||||| ||||||| ||| || ||| | ||||| || ||||||||||||||| | |||||||||||| |||| | ||||||||    
T  47456886 ggaagtttcggagcaatctgatcaagtagcccgaaaaccgaatttttgactaagaatatctaacaatgacctaaaacataaggatga 47456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 53836069 - 53836119
Alignment:
Q  8 gtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    ||||||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  53836069 gtttaaacgatagaattttggattttgagggacggagtcccgtaagaagtc 53836119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 7863722 - 7863608
Alignment:
Q  109 tttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaa 208  Q
    ||||| ||||||| |||||| ||| | ||||| || |||||| | ||||||||  || |||||||| |||| |||||||| ||||||| ||  |||||||    
T  7863722 tttcggagcaatctgattaagtagcccgaaaaccgaattttttattaagaacagttaccaatgacctaaaacagaaggataaaagttagga--atattaa 7863625  T
Q  209 tatggtctttaaaatga 225  Q
    ||| ||| |||||||||    
T  7863624 tattgtccttaaaatga 7863608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 37222206 - 37222161
Alignment:
Q  145 atttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||    
T  37222206 attttttactaagaacaactaacaatgacccaaaacagaatgatga 37222161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 46381074 - 46381164
Alignment:
Q  129 ctagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaa 221  Q
    |||||| ||||| | |||||||||||||||| |||||||||||| | ||||  |||| |||| ||||||  ||| |||||||||||| |||||    
T  46381074 ctagtccgaaaaccagatttttgactaagaataactaacaatgatctaaaactgaagaatgagagttat--gaagattaatatggtccttaaa 46381164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 3703044 - 3703116
Alignment:
Q  12 aaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    |||||||||||||||| ||||||| ||  |||||||| |||||||||  || ||||| |||| ||||||||||    
T  3703044 aaacgatggaattttggattttgaaggacggagtcccataagaagtcatttctaagggagtcatgatctttga 3703116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 55052492 - 55052592
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacc-caaaatagaaggatgaaagtt 195  Q
    ||||| || |||||||| |||||||| || || ||| | ||||||  ||||||||||||||||||  |||||||||||  ||||| ||||||||| ||||    
T  55052492 tttctagggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgaccaaaaaatggaaggatgatagtt 55052591  T
Q  196 a 196  Q
    |    
T  55052592 a 55052592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 38417170 - 38417119
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||| ||||||| ||||||| ||| ||||||| ||||||||||||||    
T  38417170 taaacgatgaaattttggattttgaagggcggagtcctgtaagaagtccctt 38417119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 1788238 - 1788185
Alignment:
Q  146 tttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||||| ||||||||||| ||||||||||| |||| ||||| |||| ||||||||    
T  1788238 ttttttactaagaacaagtaacaatgacctaaaacagaagaatgagagttatga 1788185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 25140592 - 25140664
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||||||||||| |||||||  || ||| ||||| ||||||| |||| ||||| ||||||||||    
T  25140592 gggtgtaaacgatggaattttggattttga-tggcggaatcccgcaagaagttccttctaagggagtcttgatc 25140664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 27879792 - 27879714
Alignment:
Q  146 tttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgac 226  Q
    |||||||||| |||||||||||||||| | |||| | ||  |||| |||||   |||||||||||||||| ||||||||||    
T  27879792 tttttgactaggaacaactaacaatgatctaaaacaaaattatgagagtta--ggaatattaatatggtccttaaaatgac 27879714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 32601217 - 32601169
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcc 59  Q
    ||||||||||||||||| |||||||| || ||||||||  |||||||||    
T  32601217 taaacgatggaattttggattttgagcggcggagtcccccaagaagtcc 32601169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 36980947 - 36980763
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||||||||| |||||||||||||||| | ||||||| |||||||||||||| || || |||||||||| ||||        ||| ||||||     
T  36980947 atgggtctaaacgatgggattttgaattttgaggagcggagtcctgtaagaagtcccttctaggggagtcttgatccttgattttttcctgattttctgt 36980848  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||| ||||||||||| || ||| | |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  36980847 ggaagtttcggagcaatccgatcaagtagcccgaaaatcggatttttgactaagaatagctaacaatgacccaaaatagaaggat 36980763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 42280672 - 42280895
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| || || |||  || || ||||        ||| |||||||    
T  42280672 atgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctaggggagttatggtccttgaactttttttgattttctgg 42280771  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| || |||||||| || |||||  |||||| ||||||||||||||||||  |||||||||||||||| |||||||||| |||||   |||     
T  42280772 ggaagtttcgaagtaatccgatcaagtagtccaaaaatccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagtta--ggaag 42280869  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  42280870 attaatattgtccctaaaatgactat 42280895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 3095063 - 3094871
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||||||| |||||| |||||| |||||||  || || |||| || || ||||        ||| |||||||    
T  3095063 atgggtctaaacgatgaaattttggattttgaggggtggagtcgcgtaagtagtccctcctatgggagtcatggtccttgaattttttatgattttctgg 3094964  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| ||||||||||| || ||||| |||||   ||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  3094963 gcaagtttcggagcaatccgatcaagtagtccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagtta 3094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 11698097 - 11698289
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||| || || |||| || || ||||        ||| |||||||    
T  11698097 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagacgtcccttctatgggagtcatggtccttgaattttttctgattttctgg 11698196  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| |||| |||||| || ||| | ||||| | ||||||||||||||||||  ||||||||||| ||||  ||||||||| |||||    
T  11698197 ggaagtttcggagcattccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgaccaaaaacggaaggatgagagtta 11698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 8885233 - 8885457
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng-tgagtttctg 102  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||| |||||||||||||| || || |||| || || ||||         ||| ||||||    
T  8885233 atgggtctaaatgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctacgggagtcatggtccttgaatttttttctgattttctg 8885332  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    |||| |||||| ||||||||||| || ||||| ||||| | ||||||| ||||||||||  ||||||| |||||||| |||||||||| |||||   |||    
T  8885333 ggaatgtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaataacccaaaacagaaggatgagagtta--ggaa 8885430  T
Q  203 tattaatatggtctttaaaatgactat 229  Q
     |||||||| |||  ||||||||||||    
T  8885431 gattaatattgtccctaaaatgactat 8885457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 28917146 - 28916930
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||| ||||||||||| ||||||||||| |||||||| |||||||| |||| ||||| |||| || || ||||        ||| |||||||| |||||    
T  28917146 taaacaatggaattttggattttgaggggcggagtcccataagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaagtt 28917047  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttg-actaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    ||| ||||||||||| || ||||| ||||| | |||||||  || |||||||  |||||||||||||||| |||||||||| ||||| || || ||||||    
T  28917046 tcggagcaatccgatcaagtagtc-gaaaacccgatttttttaccaagaacatgtaacaatgacccaaaacagaaggatgagagtta-ga-aagattaat 28916950  T
Q  210 atggtctttaaaatgactat 229  Q
    || |||  ||||||||||||    
T  28916949 attgtccctaaaatgactat 28916930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 34853706 - 34853483
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||  ||||||||| || ||||| |||| || || ||||        ||| ||| |||    
T  34853706 atgggtctaaacgatggaattttttattttgaggggcggagtcccagaagaagtcctttctaagggagtcatggtccttgaattttttctgattttatgg 34853607  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| ||||||||||| || || || |||||   ||||| || |||||||||  |||||||||||||||| |||||||||| |||||   |||     
T  34853606 ggaagtttcggagcaatccgatcaagtaatccgaaaactcgatttctgcctaagaacaggtaacaatgacccaaaacagaaggatgagagtta--ggaag 34853509  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  34853508 attaatattgtccctaaaatgactat 34853483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 36318167 - 36317955
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||||||||||| |||||||||||| |||||| | |||||||||  || ||||| |||||||||| |||         | | ||||||||||||||    
T  36318167 taaacgatggaattttaaattttgaggggtggagtctcataagaagtcatttctaaggtagtcttgatccttgtttttttcctaattttctgggaaagtt 36318068  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    | | | | ||||||| || ||| | |||||||| |||| |||||||||||| |||||||||||||||||| ||| ||| | ||||| || || |||||||    
T  36318067 ttggaactatccgatcaagtagcccgaaaatcgaatttctgactaagaacagctaacaatgacccaaaattgaaagataagagtta-ga-aagattaata 36317970  T
Q  211 tggtctttaaaatga 225  Q
    | ||| |||||||||    
T  36317969 ttgtccttaaaatga 36317955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 31519675 - 31519857
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| |||||||||||  ||||||||||||| ||||||| |||||  ||| || || ||||        ||| ||| |||    
T  31519675 atgggtctaaacaatggaattttggattttgagggg--gagtcccgtaagacgtcccttctaagggtgtcatggtccttgaattttttctgattttatgg 31519772  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||| | ||||| | ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  31519773 ggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgaccaaaaacaaaaggat 31519857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 27927819 - 27927945
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgag 200  Q
    |||| |||||||| ||||||| ||| || ||||| ||||| |  |||||| ||||||||||  |||||||||||||||| |||||||||| |||||   |    
T  27927819 tggggaagtttcggagcaatctgatcaagtagtccgaaaacccaatttttaactaagaacaggtaacaatgacccaaaacagaaggatgagagtta--gg 27927916  T
Q  201 aatattaatatggtctttaaaatgactat 229  Q
    || |||||||| |||| ||||||||||||    
T  27927917 aagattaatattgtctctaaaatgactat 27927945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 28423799 - 28423581
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagttt-ctg 102  Q
    |||||||||||   |||||||||| ||||||||||  |||||||| |||||||||| || || || |||||||||| ||||        | | ||| |||    
T  28423799 atgggtttaaattgtggaattttggattttgagggatggagtcccataagaagtcctttctacgggagtcttgatccttgatattttttttaattttctg 28423700  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    |  |||||||| || |||||||| || ||| | ||||| |  |||||||||||||||||||| |||||||| |||||||||||||||| |||||   |||    
T  28423699 gctaagtttcggagtaatccgatcaagtagcccgaaaaactaatttttgactaagaacaact-acaatgacgcaaaatagaaggatgagagtta--ggaa 28423603  T
Q  203 tattaatatggtctttaaaatg 224  Q
     |||||||| |||| |||||||    
T  28423602 gattaatattgtctgtaaaatg 28423581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 33472353 - 33472280
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||| ||||||||||||||||||| | |||||||||||||||| ||| ||||| ||||||||||    
T  33472353 gggtctaaacgatgaaattttgaattttgaggggcgtagtcccgtaagaagtctcttctaagggagtcttgatc 33472280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 9845462 - 9845395
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||| |||| ||||||||||||||||    
T  9845462 taaacgatggaattttaaattttgagggatggagtcccgtaagaagt-ccttctaaggaagtcttgatc 9845395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 40328266 - 40328083
Alignment:
Q  13 aacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng-tgagtttctgggaaagttt 111  Q
    ||||||||||||| || |||||||||| |||||||||||||||||  ||| || || |||| ||||| ||||         ||| ||||| || ||||||    
T  40328266 aacgatggaatttgga-ttttgaggggcggagtcccgtaagaagtttcttttacgggagtcatgatccttgaatttttttctgattttctagggaagttt 40328168  T
Q  112 cgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
     | ||||||||||| || ||||| ||||| | ||||||||||||||||||  ||||||| |||||||| |||| ||||| |||||    
T  40328167 tggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaataacccaaaacagaaagatgagagtta 40328083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 7981887 - 7981706
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng--tgagtttctgggaaag 108  Q
    ||||||||||||||||| ||||||||||| | |||||  ||| || |||||| ||||| |||||||||  ||||          ||| |||| | | |||    
T  7981887 taaacgatggaattttggattttgaggggcgaagtcctataacaaatcccttctaagggagtcttgatgcttgattttttttcctgattttcggaggaag 7981788  T
Q  109 tttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    ||||| ||||||||||| || ||| |||||||| | |||||| | ||| ||||||||||||| |||||||| ||||||||||    
T  7981787 tttcgaagcaatccgatcaagtagcctgaaaattgcatttttaattaataacaactaacaataacccaaaacagaaggatga 7981706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 8621520 - 8621594
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaat 180  Q
    |||||||| ||||||||||| || |||    ||||| |||||||||||||||||||||||||||||||| |||||    
T  8621520 aagtttcggagcaatccgatcaagtagctcaaaaattggatttttgactaagaacaactaacaatgacctaaaat 8621594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 36165711 - 36165842
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcg-gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtt 195  Q
    |||||||| |||||||| ||||||||||| || ||| |  |||| |  | ||||| ||||||||||  |||||||||||||||| |||||||||| ||||    
T  36165711 tttctggggaagtttcggagcaatccgatcaagtagcccaaaaaacccggtttttaactaagaacatgtaacaatgacccaaaacagaaggatgagagtt 36165810  T
Q  196 atgagaatattaatatggtctttaaaatgactat 229  Q
    |  |||| |||||||| |||| |||||| |||||    
T  36165811 a--agaagattaatattgtctctaaaataactat 36165842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 9073789 - 9073696
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||| | |||||||| |||||||| || || |||||  |||| | ||||||||||||||||||  |||||||||||||||| | ||||||||    
T  9073789 tttctgaggaagtttcggagcaatccaatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacccaaaacataaggatga 9073696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 17119756 - 17119852
Alignment:
Q  100 ctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| |||||||| || ||||| || || ||||| ||||| | | ||||||||||||||||  ||||||||| |||||| |||||||||| |||||    
T  17119756 ctggggaagtttcggagaaatccaatcaagtagtccgaaaacccggtttttgactaagaacaggtaacaatgatccaaaacagaaggatgagagtta 17119852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 31234604 - 31234678
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcc--cgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||||||||||| ||||||| ||| |||||||  ||||||||||||||| ||||| ||||||||||    
T  31234604 gggtctaaacgatggaattttggattttga-gggcggagtcccgcgtaagaagtcccttctaagggagtcttgatc 31234678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 40392812 - 40392740
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaa 178  Q
    |||||||| || |||||||| || |||  ||||||   |||||||||||||||||||||||||||||||||||    
T  40392812 aagtttcggagaaatccgatcaagtagcttgaaaacttgatttttgactaagaacaactaacaatgacccaaa 40392740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 6395349 - 6395270
Alignment:
Q  117 caatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||| || ||| | ||||||| |||||||||||| ||||| |||||||||||| |||| ||||| |||| |||||    
T  6395349 caatccgatcaagtagcccgaaaatcagatttttgactacgaacagctaacaatgacctaaaacagaagaatgagagtta 6395270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 10840534 - 10840585
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaa 55  Q
    |||||| |||| ||||| |||||||||||||||||| |||||||||||||||    
T  10840534 atgggtctaaaagatgggattttgaattttgaggggtggagtcccgtaagaa 10840585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 14163845 - 14164061
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||| |||||||||||  ||||||||||| |||||||||||||||||   |||||||| || | || || ||||        ||| |||||||| | |||    
T  14163845 taaatgatggaattttttattttgaggggcggagtcccgtaagaagttatttataagggagccatggtccttgaattttttctgattttctggggaggtt 14163944  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcgga-tttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    ||| ||||| ||||| || ||  | ||||| || | ||||||||||||||||  ||||||||||| |||| |||||||||| |||||   ||| ||||||    
T  14163945 tcggagcaaaccgatcaagtaccccgaaaa-cgcagtttttgactaagaacaggtaacaatgaccaaaaacagaaggatgagagtta--ggaaaattaat 14164041  T
Q  210 atggtctttaaaatgactat 229  Q
    || |||  ||||||||||||    
T  14164042 attgtccctaaaatgactat 14164061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 1076831 - 1076765
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatga 172  Q
    |||||||| |||||||| || || ||| | ||||||| |||||||||| ||||||||||||||||||    
T  1076831 aagtttcgaagcaatccaatcaagtagcccgaaaatcagatttttgaccaagaacaactaacaatga 1076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 34645657 - 34645563
Alignment:
Q  102 gggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| ||||| ||||||  ||| || ||| | ||||| ||||| ||||||||||||||  ||||||||| |||||| |||||||||| |||||    
T  34645657 gggaaaatttcggagcaatgtgatcaagtagcccgaaaaccggatgtttgactaagaacatgtaacaatgatccaaaacagaaggatgagagtta 34645563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 21004660 - 21004567
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    |||||||  ||||||| ||| || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| | |||||| | ||||||||    
T  21004660 aagtttcagagcaatctgatcaagtagccggaaaacccgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagttatga 21004567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27927731 - 27927784
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    |||||| ||||||||| ||||||| |||| |||||| |||||||||||||||||    
T  27927731 atgggtctaaacgatgaaattttggatttggaggggtggagtcccgtaagaagt 27927784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 44106461 - 44106409
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||||| |||||    
T  44106461 gatttttgactaagaacaggtaacaatgactcaaaacagaaggatgagagtta 44106409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4259463 - 4259514
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaa 55  Q
    |||||| |||| ||| |||||||| ||||||||||| |||||||||||||||    
T  4259463 atgggtctaaaggatagaattttggattttgaggggcggagtcccgtaagaa 4259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 40995041 - 40994990
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||||||||| |||||||| || |||||||||||| || ||||||    
T  40995041 taaacgatggaattttggattttgagaggcggagtcccgtaataaatccctt 40994990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 41530942 - 41530885
Alignment:
Q  21 aattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||| ||||||||||  |||||||||||||||||| ||| ||||| ||||||||||    
T  41530942 aattttggattttgagggc-ggagtcccgtaagaagtctcttctaagggagtcttgatc 41530885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 4259561 - 4259639
Alignment:
Q  147 ttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||||||||||||| | |||  |||||||||| |||||   ||| |||||||| |||  ||||||||||||    
T  4259561 ttttgactaagaacaactaacaatgatcgaaa--agaaggatgatagtta--ggaagattaatattgtccataaaatgactat 4259639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 24628059 - 24627992
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||| |||||||| ||||||||||  |||||| ||||||||||| ||| ||||| ||||||||||    
T  24628059 taaatgatagaattttggattttgagggc-ggagtctcgtaagaagtctcttctaagggagtcttgatc 24627992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 14112205 - 14111984
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| || || | || || || ||||        ||| |||||||    
T  14112205 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggattcatggtccttgaattttttctgattttctgg 14112106  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| |||||||| || || ||||| ||||| | ||||||||||||||||||| ||||||| |||||||||  ||||||||||||||   |||     
T  14112105 ggaagtttcggagcaatcctatcaagtagtccgaaaacccgatttttgactaagaacaagtaacaataacccaaaat--aaggatgaaagtta--ggaag 14112010  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  14112009 attaatattgtccctaaaatgactat 14111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 37183562 - 37183785
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||| |||||||||||| ||||||||||| |||||||||||||| ||||||| || || |||| || || ||||        ||| ||| |||    
T  37183562 atgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagatgtcccttctacgggagtcatggtccttgaattttttctgattttatgg 37183661  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | | |||||| ||||||||||| || ||||||||||| | ||||||||||||||||||| |||||||||||||||| | || ||||| |||||   |||     
T  37183662 ggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacccaaaacaaaaagatgagagtta--ggaag 37183759  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  37183760 attaatattgtccataaaatgactat 37183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 32841752 - 32841943
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||| || || |||| ||||| ||||        ||| |||||||    
T  32841752 atgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaggggagtcatgatccttgaattttttctgattttctgg 32841851  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | || ||||| ||||||||||| || ||| | ||||| | |||||||||||| |||||  |||||||||| |||||||||||||||| |||||    
T  32841852 g-aattttcggagcaatccgatcaagtagcccgaaaacccgatttttgactacgaacatgtaacaatgactcaaaatagaaggatgagagtta 32841943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 38871918 - 38871819
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  38871918 tttctgggaaagtttcggagcaatccgattaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacagaaggatgagagtta 38871819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 6157071 - 6156848
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||  || || |||| || || ||||        ||| |||||||    
T  6157071 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtccctactacgggagtcatggtccttgaattttttctgattttctgg 6156972  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    |||||||||| ||||||||||| || ||| |  |||| | | ||||| ||||||||||  ||||||||||| |||| |||||||||| |||||   |||     
T  6156971 gaaagtttcggagcaatccgatcaagtagcccaaaaacccggtttttaactaagaacatgtaacaatgaccaaaaacagaaggatgagagtta--ggaag 6156874  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  6156873 attaatattgtccctaaaatgactat 6156848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 38692570 - 38692783
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctta-taaggaagtcttgatctttgannnnnnngtgagtttctgggaaagt 109  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||||  ||||| |||| || || ||||        ||| ||| |||| ||||    
T  38692570 taaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttcctaagggagtcatggtccttgaattttttctgattttttggggaagt 38692669  T
Q  110 ttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    |||| ||||||||||  || ||||| ||||| | ||||||||||||||||    |||||||||||||||| |||| ||||| ||||||  ||||||||||    
T  38692670 ttcggagcaatccgaccaagtagtccgaaaacccgatttttgactaagaatgggtaacaatgacccaaaacagaaagatgagagttat--gaatattaat 38692767  T
Q  210 atggtctttaaaatga 225  Q
    || ||| |||||||||    
T  38692768 attgtccttaaaatga 38692783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 31928906 - 31929098
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||| ||| ||||||||| |||||||||||| ||||| |||| || || ||||        ||| |||||||    
T  31928906 atgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctaagggagtcatggtccttgaattttttctgattttctgg 31929005  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| ||||||||||| || ||| | ||||| | | ||||| ||||||||||  |||||||||| ||||| |||||||||| |||||    
T  31929006 ggaagtttcggagcaatccgatcaagtagcccgaaaacctggtttttaactaagaacaggtaacaatgactcaaaacagaaggatgagagtta 31929098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 20891945 - 20891761
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||| ||  ||| |||||||||||||||||| || || |||| ||||| ||||        ||  |||||||| |||||    
T  20891945 taaacgatggaattttggattttgaaggacggaatcccgtaagaagtcccttgtaggggagtcatgatccttgaattttttctgt-tttctggggaagtt 20891847  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||| ||||||| | |||||||||||||||| |  ||||||| |||||||| |||||||||| |||||    
T  20891846 tcggagcaatccgatcaagtagcctgaaaacccgatttttgactaagaataggtaacaataacccaaaacagaaggatgagagtta 20891761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 31221127 - 31221343
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| ||||||||||| |||||| ||||||||||||||| || |||||||  | || ||||        ||| |||||||| |||||    
T  31221127 taaacgatgaaattttggattttgaggggcggagtctcgtaagaagtcccttctatggaagtcacggtccttgaattttttctgattttctggggaagtt 31221226  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    ||| ||||||||||| || ||| | ||||| |   ||||| ||||||||||  |||||||||||||||| |||| ||||| |||||   ||| |||||||    
T  31221227 tcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacatgtaacaatgacccaaaacagaaagatgagagtta--ggaagattaata 31221324  T
Q  211 tggtctttaaaatgactat 229  Q
    | |||  ||||||||||||    
T  31221325 ttgtccctaaaatgactat 31221343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 13908783 - 13908665
Alignment:
Q  109 tttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaa 208  Q
    ||||| ||||||||||| || ||||||||||| | |||||||||| ||||||| ||||||||||| ||||| ||||||||||| ||||  |||| |||||    
T  13908783 tttcggagcaatccgatcaagtagtctgaaaacctgatttttgacaaagaacagctaacaatgactcaaaagagaaggatgaaggtta--agaagattaa 13908686  T
Q  209 tatggtctttaaaatgactat 229  Q
    ||| |||  ||||||||||||    
T  13908685 tattgtccataaaatgactat 13908665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 26898591 - 26898776
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| ||||||||||| ||||||| |||||||||||||| ||  | |||| || || ||||        ||| ||| |||| |||||    
T  26898591 taaacgatgaaattttggattttgaggggcggagtcctgtaagaagtcccttctacaggagtcatggtccttgaattttttctgattttttgggcaagtt 26898690  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||| | |||||   ||||||||||||||||||  |||||||||| ||||| |||||||||| |||||    
T  26898691 tcggagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacatataacaatgactcaaaacagaaggatgagagtta 26898776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 39525109 - 39524924
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| |||||||||||  |||||||  ||||||| |||| ||||| |||| || || ||||        ||| |||||||| || ||    
T  39525109 taaacgatggaattttggattttgaggggcagagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaaatt 39525010  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||| ||| || ||||  ||||| |  ||||| |||||||||||| |||||||||||||||| |||||||||| |||||    
T  39525009 tcggagcaatctgatcaagtagttcgaaaacccaattttggactaagaacaagtaacaatgacccaaaacagaaggatgagagtta 39524924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 33487951 - 33487776
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||| ||||| || |||||  |||||||||||| ||||| |||| ||||| ||||        ||| |||||||    
T  33487951 atgggtctaaacgatggaattttggatttttaggggcggggtcccaaaagaagtcccttctaagggagtcatgatccttgacttttttctgattttctgg 33487852  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    | |||||||| |||||  |||| || ||| | |||||   ||||||||||||||||||  ||||||||||||||||    
T  33487851 ggaagtttcggagcaaatcgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaa 33487776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 15799558 - 15799380
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| |||||||| |  |||||||||| || || || | || || ||||        ||| |||||||| |||||    
T  15799558 taaacgatggaattttggattttgaggggtggagtcccattggaagtcccttctaggggaggcatggtccttgaattttttttgattttctgggcaagtt 15799459  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatg 189  Q
    ||| ||||||||| | || ||| | | ||| | ||||||||||||||||||  |||||||||||||||| |||||||||    
T  15799458 tcggagcaatccggtcaagtagcccggaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatg 15799380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 16429317 - 16429244
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  16429317 gggtctaaacgataaaattttgaattttgaggggcggagtcccgtaagaagtcccttctaaggtagtcttgatc 16429244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 7884534 - 7884341
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttct-g 102  Q
    |||||| ||||| ||| ||||||  ||||||||||| ||||| |||||||||||| ||| || || |||| || || ||||        ||| ||| | |    
T  7884534 atgggtctaaacaatgaaattttagattttgaggggcggagttccgtaagaagtctcttctacgggagtcatggtccttgaatgttttctgattttatag 7884435  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    || |||||||| ||||||||||| || ||| | ||||||| |||| |||||||||||||  |||||||||||||||| |||||||||| |||||    
T  7884434 gggaagtttcggagcaatccgatcaagtagcccgaaaatccgattcttgactaagaacatgtaacaatgacccaaaacagaaggatgagagtta 7884341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 26622357 - 26622260
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| | |||||||| ||||||| ||| || ||||| ||||| |||||||||||||||  |||||||||||| ||| |||||||||||||||||||||    
T  26622357 tttctgaggaagtttcggagcaatctgatcaagtagtccgaaaaccggatttttgactaa--acaactaacaataacctaaaatagaaggatgaaagtta 26622260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 15958082 - 15957914
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| |||||||| || | |||||| ||||||||| ||| ||||| |||  || || ||||        ||| |||||||| |||||    
T  15958082 taaacgatgaaattttggattttgagaggcgaagtcccataagaagtcgcttctaagggagttatggtccttgaattttttctgattttctggggaagtt 15957983  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||| ||||||||||| || ||||| ||||| | ||||||||||||||||||  ||| ||||||||||||    
T  15957982 tcggagcaatccgatcaagtagtccgaaaacctgatttttgactaagaacaggtaataatgacccaaaa 15957914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 33901197 - 33901115
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    |||||||| ||||||| ||| || |||||||||||||  |||||||||||| ||||||||||||||||| |||| ||||||||    
T  33901197 aagtttcggagcaatctgatcaaatagtctgaaaatcaaatttttgactaaaaacaactaacaatgacctaaaagagaaggat 33901115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 27158424 - 27158238
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||| ||| ||| |||||  ||  || |  | |||||||| ||||        ||| |||||||    
T  27158424 atgggtctaaacgatggaattttggattttgaggggcggaatccagtatgaagtttctcttacgagaatcttgatccttgattttttcctgattttctgg 27158325  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||||||| ||||||| ||| || ||| ||||||| || |||||| | ||| ||||||||| ||||||||||||  |||||||||    
T  27158324 gaaagtttcggagcaatctgatcaagtagcctgaaaaccgaattttttattaataacaactaataatgacccaaaagtgaaggatga 27158238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 27213041 - 27212852
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||| ||||||||||  ||||||||||| |||||||||||||||||||||| || || |||| ||  | ||||        ||| ||||| ||     
T  27213041 gggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggacgttgaatttttc-tgattttctaggg 27212943  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||| ||| |||||||| || || ||||| ||||| | ||||||||||||||||||  |||||||||| ||||  |||||||||| |||||    
T  27212942 aagtatcggagcaatccaatcaaatagtccgaaaacccgatttttgactaagaacaggtaacaatgactcaaaccagaaggatgagagtta 27212852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 38372630 - 38372472
Alignment:
Q  15 cgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtttcgt 114  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||| || || ||||        |||  ||||||| ||||||||     
T  38372630 cgatggaattttggattttgaggggtggagtcccgtaagaagtctcttctaaggaagtcatggtccttgaattttttctgatcttctggggaagtttcgg 38372531  T
Q  115 agcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgac 173  Q
    ||| ||||||| || ||| | ||||| |  |||||| ||||||||||  ||||||||||    
T  38372530 agcgatccgatcaagtagcccgaaaacccaatttttaactaagaacatgtaacaatgac 38372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 4064593 - 4064693
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgaccc-aaaatagaaggatgaaagtt 195  Q
    |||||||| |||||||| |||||||| || || ||| | ||||||  ||||||||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  4064593 tttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaaatagaaggatgatagtt 4064692  T
Q  196 a 196  Q
    |    
T  4064693 a 4064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 12465011 - 12465095
Alignment:
Q  115 agcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||||||||||| || ||||||||||| | ||||||||||||||||||| ||||||||| |||||| | |||||| | ||||||||    
T  12465011 agcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgatccaaaacaaaaggataagagttatga 12465095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 26093799 - 26093743
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccc 60  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  26093799 atgggtctaaatgatggaattttggattttgaggggaggagtcccgtaagaagtccc 26093743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 6800805 - 6800894
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||| |||||||| ||||||  ||| || ||||  ||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  6800805 tgggcaagtttcggagcaatatgatcaagtagttcgaaaaccggatttttgactaagaacatctaacaatgacctaaaacagaaggatga 6800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 11185968 - 11186171
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||||||| |||||||||||||||||||| |||||  |||||||||||||||  | || |||| ||||| ||||            |||||||    
T  11185968 atgggtctaaacgattgaattttgaattttgaggggcggagtatcgtaagaagtcccttcaacgggagtcctgatccttgat-----------tttctgg 11186056  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
      |||||||| |||||||  || || |||| |||||| || |||||| |||||||||| |||||||| ||| |||| |||||||||| ||| |  ||||     
T  11186057 agaagtttcggagcaatctaatcaagtagt-tgaaaaccgaattttttactaagaacatctaacaattacctaaaacagaaggatgagagtca--agaaa 11186153  T
Q  204 attaatatggtctttaaa 221  Q
    |||||||||||| |||||    
T  11186154 attaatatggtcattaaa 11186171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 23269584 - 23269458
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || ||| | ||||| | ||||||||| |||||||| ||||| || ||||| |||||||| |||| |||||    
T  23269584 tttctggggaagtttcgaagcaatccgatcaagtagcccgaaaacccgatttttgaataagaacatctaactataacccagaatagaagaatgagagtta 23269485  T
Q  197 tgagaatattaatatggtctttaaaatga 225  Q
       ||| |||||||| ||| |||||||||    
T  23269484 --ggaagattaatattgtccttaaaatga 23269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 26190103 - 26190260
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||| |||||||| |||| || || |||| || || ||||        ||| ||| |||    
T  26190103 atgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagttccttctaggggagtcatggtcgttgaattttttttgattttttgg 26190202  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaaca 161  Q
    | |||||||  |||||||||||  | ||||| ||||| | ||||||||||||||||||    
T  26190203 ggaagtttcagagcaatccgatctagtagtccgaaaacccgatttttgactaagaaca 26190260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 28083252 - 28083382
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||| ||| ||||||||||| || ||||| |||||   |||||||  |||||||||  ||||||||||| |||| ||||||||||||||||    
T  28083252 tttctggggaagtatcggagcaatccgatcaagtagtccgaaaactcgattttttcctaagaacaggtaacaatgaccaaaaacagaaggatgaaagtta 28083351  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
     || || |||||||| |||  ||||||||||||    
T  28083352 -ga-aagattaatattgtccctaaaatgactat 28083382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5456396 - 5456322
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgat 78  Q
    |||| ||||||||||| ||||||| |||||||| || ||||||||||||||| |||||| ||||  |||||||||    
T  5456396 atggatttaaacgatgaaattttggattttgagaggcggagtcccgtaagaaatcccttctaagtgagtcttgat 5456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 40619766 - 40619824
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  40619766 atgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagaagttcctt 40619824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 8739079 - 8739138
Alignment:
Q  20 gaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||||||| ||||||||||| |||||||||||| |||| |||| ||||| ||||||||||    
T  8739079 gaattttggattttgaggggcggagtcccgtaataagttccttctaagggagtcttgatc 8739138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 26093655 - 26093621
Alignment:
Q  145 atttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||||||||||||||||||||||||||||||    
T  26093655 atttttgactaagaacaactaacaatgacccaaaa 26093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 28445287 - 28445356
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctt 81  Q
    ||||||||||||||||| ||||||| ||| |||||  | ||||||||||||| ||||| ||||||||||||    
T  28445287 taaacgatggaattttggattttga-gggcggagtatcataagaagtcccttctaagggagtcttgatctt 28445356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 38641163 - 38641106
Alignment:
Q  21 aattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||| |||||||||| ||| ||||||||||||||| ||| ||||||||||||||||    
T  38641163 aattttggattttgagggcagg-gtcccgtaagaagtctcttctaaggaagtcttgatc 38641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 38640970 - 38640898
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| |||||||||||| ||||||||||  | ||||||||||||||||  |||||||| ||||||||||    
T  38640970 gggtctaaatgatggaattttggattttgagggc-gtagtcccgtaagaagtcatttataagggagtcttgatc 38640898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 26622458 - 26622404
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    |||||| ||||||||  ||||||||||||||||||| |||||| | |||||||||    
T  26622458 atgggtctaaacgataaaattttgaattttgaggggcggagtctcataagaagtc 26622404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 12464912 - 12464957
Alignment:
Q  17 atggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||    
T  12464912 atggaattttggattttgaggggcagagtcccgtaagaagttcctt 12464957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 21070705 - 21070632
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttga 77  Q
    |||||| ||||| ||||||||||| |||||||||||  | ||||  ||||||||||||| || || ||||||||    
T  21070705 atgggtctaaacaatggaattttggattttgaggggcagtgtccaataagaagtcccttctaggggagtcttga 21070632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 225
Target Start/End: Original strand, 24203558 - 24203684
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| || |||||||| ||||||||||| || ||| | |||||    |||||| ||||||||||  ||||||||| |||||| |||||| ||| |||||    
T  24203558 tttcttgggaagtttcggagcaatccgatcaaatagcccgaaaactcaatttttaactaagaacaggtaacaatgatccaaaacagaaggttgagagtta 24203657  T
Q  197 tgagaatattaatatggtctttaaaatga 225  Q
       ||| |||||||| ||| |||||||||    
T  24203658 --ggaacattaatattgtccttaaaatga 24203684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 12847643 - 12847603
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaa 184  Q
    |||||||||||||||||| |||||||||| |||||| ||||    
T  12847643 gatttttgactaagaacagctaacaatgatccaaaacagaa 12847603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 43387948 - 43388011
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtctt 75  Q
    |||| |||||||||||| |||||||||   ||||||||||||||||||| || ||||| ||||||    
T  43387948 taaatgatggaattttggattttgaggac-ggagtcccgtaagaagtcctttctaagggagtctt 43388011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 199
Target Start/End: Complemental strand, 51258782 - 51258587
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||| || || |||| ||||| ||||        ||| |||||||    
T  51258782 atgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctgg 51258683  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    |||||||||| ||||||||||| || | ||| |||||   ||||||||||||||||||  |||||||||| ||||| | |||||||| ||||||||    
T  51258682 gaaagtttcggagcaatccgatcaagttgtccgaaaactcgatttttgactaagaacatgtaacaatgactcaaaacaaaaggatgagagttatga 51258587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 35345690 - 35345913
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||| || |  |||||||||  ||||        ||| |||||||    
T  35345690 atgggtttaaacggtggaattttggattttgaggggcggagtcccgttagaagtcccttctacgagagtcttgatacttgattttcttctgattttctgg 35345789  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| ||||||||||| || ||  | ||||| |  |||||||||||||||||||||||||||||  |||| | |||||||| ||||| || |||    
T  35345790 ggaagtttcggagcaatccgatcaattaacccgaaaacccaatttttgactaagaacaactaacaatgacgaaaaacaaaaggatgagagtta-ga-aat 35345887  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  35345888 attaatattgtccataaaatgactat 35345913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 35142451 - 35142229
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||| ||||| |||| ||||||||||||||||| || || |||| || || ||||        ||| |||||||    
T  35142451 atgggtctaaacgatggaattttggatttttaggggcggagccccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttctgg 35142352  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    ||| |||||| ||||||||||| || ||| | ||||| |   ||||||||||||||||  |||||||||||||||  |||||||||| |||||   |||     
T  35142351 gaa-gtttcggagcaatccgatcaagtagcccgaaaacccagtttttgactaagaacagataacaatgacccaaagcagaaggatgagagtta--ggaag 35142255  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||||||||||||||||    
T  35142254 attaatattgtctttaaaatgactat 35142229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 46622576 - 46622762
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||| |   || || || |||  || || ||||        ||| |||||||    
T  46622576 atgggtctaaacgatggaattttggattctgaggggcggagtcccgtaagaaattgattctatgggagtgatggtccttgaattttttctgattttctgg 46622675  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||||||| ||||||||||| || ||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  46622676 gaaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaagtaacaatgacccaaaacagaagaatga 46622762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 3902594 - 3902782
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||| | |||| |||||  ||| || || ||||        ||| |||||||| |||||    
T  3902594 taaacgattgaattttggattttgaggggcggagtcccgtaagaaattccttctaagggtgtcatggtccttgaattttttctgattttctgggcaagtt 3902693  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||  ||||||||||| || || |||||||| | ||||||||||||||||||  |||||||||||||||  |||||||||| ||||||||    
T  3902694 tccgagcaatccgatcaagtaatctgaaaacccgatttttgactaagaacatgtaacaatgacccaaagcagaaggatgagagttatga 3902782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 34821124 - 34821347
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||| || |  |||| || || ||||        ||| |||||||    
T  34821124 atgggtctaaacgatggaattttggattttgaggggcggactcccgtaagaagtcccttctatgagagtcatggtccttgaattttttctgattttctgg 34821223  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||  ||| ||||||| || ||| ||||||| | | ||||| ||||||||||  |||||||||||||||| |||||||||||| |||   |||     
T  34821224 ggaagtttcagagcgatccgatcaagtagcctgaaaacccgctttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaattta--ggaag 34821321  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  34821322 attaatattgtccataaaatgactat 34821347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 28873377 - 28873209
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| || || |||| || || ||||        | | |||||||| |||||    
T  28873377 taaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagtcatgttccttgaattttttctaattttctggggaagtt 28873278  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||| ||||||||||| || ||| | ||||| | ||||||||||||||||||| ||||| ||||||||||    
T  28873277 tcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacagtgacccaaaa 28873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 50716624 - 50716456
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||| ||| ||  | |||| || || ||||        ||| |||||||| |||||    
T  50716624 taaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtt 50716525  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||| ||||||||||| || ||| | ||||| | ||||||||||||||||||| ||||||||||||||||    
T  50716524 tcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaa 50716456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 50796223 - 50796391
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||| ||| ||  | |||| || || ||||        ||| |||||||| |||||    
T  50796223 taaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtt 50796322  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||| ||||||||||| || ||| | ||||| | ||||||||||||||||||| ||||||||||||||||    
T  50796323 tcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacccaaaa 50796391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 39150180 - 39149965
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||       ||||||||||||||||| |||||||||| || || ||||        ||| |||||||    
T  39150180 atgggtctaaacgatggaattttggattttgaggg-------cccgtaagaagtcccttctaaggaagtcatggtccttgaattttttctgattttctgg 39150088  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| |||||| |||  || ||| | ||||| | | ||||| ||||||||||  ||||| |||||||||| |||||||||| ||||| || |||    
T  39150087 ggaagtttcggagcaattcgaccaagtagcccgaaaacccggtttttaactaagaacatgtaacagtgacccaaaacagaaggatgagagttaggaaaat 39149988  T
Q  204 attaatatggtctttaaaatgacta 228  Q
      |||||| |||| |||||||||||    
T  39149987 --taatattgtctctaaaatgacta 39149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 47302397 - 47302192
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtga-gtttctg 102  Q
    |||||| ||||| ||||||||||| |||||||||||  ||||||||||||||||||||| || || |||| ||||| ||||        |||  ||| ||    
T  47302397 atgggtctaaacaatggaattttggattttgaggggcagagtcccgtaagaagtcccttctatgggagtcatgatccttgaattttttctgatttttttg 47302298  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    ||||||||||  | ||||||||| || ||| | |||||   ||||||||||||||||||  |||||||||||||||| | |||||| | ||||   ||||    
T  47302297 ggaaagtttcagaacaatccgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacccaaaacaaaaggataagagtt---agaa 47302201  T
Q  203 tattaatat 211  Q
    |||||||||    
T  47302200 tattaatat 47302192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 3351854 - 3352070
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||||||| || || |||| |  ||  |||        ||| ||||| || |||||    
T  3351854 taaacgatggaattttagattttgaggggcggagtcccataagaagtcccttctacgggagtcattgtccctgaattttttctgattttctagggaagtt 3351953  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    ||| ||||||||||| || ||| ||||||| |  |||||| |||||||||   |||||||||||||||| ||||| |||| |||||   ||| |||||||    
T  3351954 tcggagcaatccgatcaagtagcctgaaaaccctattttttactaagaaccggtaacaatgacccaaaacagaagaatgagagtta--ggaagattaata 3352051  T
Q  211 tggtctttaaaatgactat 229  Q
    | |||  ||||||||||||    
T  3352052 ttgtccctaaaatgactat 3352070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 33439466 - 33439384
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||| |||||||| ||||||||||| || ||||| ||||||| ||||||| |||||||| || ||||||||||||||||    
T  33439466 tttctgggcaagtttcggagcaatccgatcaagtagtccgaaaatctgatttttaactaagaaaaagtaacaatgacccaaaa 33439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 14828704 - 14828895
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttata-aggaagtcttgatctttgannnnnnngt--gagtttctgggaaa 107  Q
    ||||||||||||||||| |||||||  || ||||||| |||||||||| ||| || ||||| |||||||| ||||        |  || ||| |||||||    
T  14828704 taaacgatggaattttggattttgaaaggcggagtcctgtaagaagtctcttctagaggaa-tcttgatccttgattatttttttcgattttatgggaaa 14828802  T
Q  108 gtttcgtagcaatccgattaactagtctgaaaatcggatttt-tgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    |||||| |||||||| || || || || ||||||| |||||| |||||||||||||||||||| ||||||||| ||| ||||||  |||||||    
T  14828803 gtttcggagcaatccaatcaagtaatccgaaaatcagattttttgactaagaacaactaacaaggacccaaaacagatggatgagggttatga 14828895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29048708 - 29048628
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||| || || || |||||||||| ||||    
T  29048708 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaataagtcctttctacgggagtcttgatccttga 29048628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 46625005 - 46624906
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||  |||||||| |||||| |||| || |||||  |||||  ||||||||||||| ||||||||| |||||||||||| |||||||||| |||||    
T  46625005 tttctggccaagtttcggagcaattcgatcaagtagtccaaaaattagatttttgactaataacaactaataatgacccaaaacagaaggatgagagtta 46624906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 43472762 - 43472973
Alignment:
Q  17 atggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtga-gtttctgggaaagtttcgta 115  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||  | |||| || || ||||        |||  ||| |||| |||||||  |    
T  43472762 atggaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtccttgaattttttctgatttttttggggaagtttcaga 43472861  T
Q  116 gcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtc 215  Q
    | |||||||| || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| | |||||| | |||||   ||| |||||||| |||    
T  43472862 gtaatccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgacccaaaacaaaaggataagagtta--ggaagattaatattgtc 43472959  T
Q  216 tttaaaatgactat 229  Q
     |||||||| ||||    
T  43472960 cttaaaatggctat 43472973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 4394355 - 4394214
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||||||||||||||| ||||||||||| ||| |||||||| |||| |||| || || |||| || || ||||        ||| |||||||||    
T  4394355 gggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctggga 4394256  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatt 147  Q
    |||||||| ||||||| ||| || ||||| ||||||| ||||    
T  4394255 aagtttcggagcaatctgatcaagtagtccgaaaatccgatt 4394214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 500974 - 501025
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  500974 taaacgatggaattttggattttgaggggcggagtgccgtaagaagtccctt 501025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 3938560 - 3938376
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||| |||||   ||||||||||| ||||||  ||||||||| |||||||||| |||| || || ||||        ||| ||| |||    
T  3938560 atgggtctaaacaatgaaatttaagattttgaggggcggagtcttgtaagaagttccttataagggagtcatggtccttgaattttttctgattttttgg 3938461  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||  | ||||| | ||||||||||||||||||  |||||||||||||||| | ||||||    
T  3938460 ggaagtttcagagcaatccgatcaagtaacccgaaaaccagatttttgactaagaacaggtaacaatgacccaaaacaaaaggat 3938376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 47123311 - 47123212
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || ||| | ||||||  | ||||| ||||||||||  |||||||| ||||||| |||||||||| |||||    
T  47123311 tttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaaggatgagagtta 47123212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 47130677 - 47130578
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || ||| | ||||||  | ||||| ||||||||||  |||||||| ||||||| |||||||||| |||||    
T  47130677 tttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaatggcccaaaacagaaggatgagagtta 47130578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 34009882 - 34009950
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||||||||||| |||||| |||| |||||| ||||||||||||||| || | |||||||||||    
T  34009882 taaatgatggaattttggattttggggggcggagtcacgtaagaagtcccttctacgaaagtcttgatc 34009950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 2358403 - 2358587
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||  ||||||||||| | |||||||||||||||||||| || || |||| || || ||||        ||| ||| |||    
T  2358403 atgggtctaaacaatggaattttagattttgaggggcgtagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttttgg 2358502  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  |||||| |||| || ||| |  |||| | |||||||||||||||| |   ||||||||||||||| | ||||||    
T  2358503 ggaagtttcagagcaattcgatcaagtagcccaaaaacccgatttttgactaagaatatgcaacaatgacccaaaacaaaaggat 2358587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 38977528 - 38977752
Alignment:
Q  4 atgggtttaaa-cgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctg 102  Q
    ||||||||||| ||||| ||||||| ||||||||||| ||||||||  |||||||||||| || || ||||  | || ||||        | | ||||||    
T  38977528 atgggtttaaaacgatgaaattttggattttgaggggcggagtcccacaagaagtcccttctacgggagtcacggtccttgaattttttcttattttctg 38977627  T
Q  103 ggaaagtttcgtagcaatccgattaactag-tctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgaga 201  Q
    || |||||| | ||||||||||| || ||| ||  ||| |||| ||||| |||||| |||  |||||||||||||||| |||||||||| |||||   ||    
T  38977628 gggaagttttggagcaatccgatcaagtagctcgaaaactcgg-tttttaactaaggacaggtaacaatgacccaaaacagaaggatgagagtta--gga 38977724  T
Q  202 atattaatatggtctttaaaatgactat 229  Q
    | |||||||| |||  ||||||||||||    
T  38977725 agattaatattgtccataaaatgactat 38977752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 45711886 - 45711941
Alignment:
Q  24 tttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||  ||||||||||    
T  45711886 tttggattttgaggggtggagtcccgtaagaagtcccttctaagagagtcttgatc 45711941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 33439565 - 33439507
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| ||||||||||||||||| |||||| |||| ||||| |||||| |||||||||    
T  33439565 atgggtctaaacgatggaattttggattttgtggggcggagttccgtaacaagtccctt 33439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 45244672 - 45244600
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| |||||||||||| ||||||||||  |||||| |||||||||||| || ||||| ||||||||||    
T  45244672 gggtctaaatgatggaattttggattttgagggc-ggagtctcgtaagaagtcctttctaagggagtcttgatc 45244600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 52777512 - 52777386
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgag 200  Q
    |||| |||||||  ||||||||||| || ||| | ||||| | ||||||||||||||||||  || ||||||||||||| | |||||| | |||||  ||    
T  52777512 tggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtagcaatgacccaaaacaaaaggataagagtta--ag 52777415  T
Q  201 aatattaatatggtctttaaaatgactat 229  Q
    || |||||||| |||  ||||||| ||||    
T  52777414 aagattaatattgtccctaaaatggctat 52777386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 5127779 - 5127855
Alignment:
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||||||||||  |||||| | || || ||||| ||||| | |||||||||| ||||||||||||||||||| |||||    
T  5127779 ggaaagtttcaaagcaattcaatcaagtagtccgaaaaccagatttttgaccaagaacaactaacaatgacgcaaaa 5127855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29036182 - 29036102
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    |||||| ||||||||| ||||||  |||||||||||  |||||||||| |||||| |||||  |||||| |||||| ||||    
T  29036182 atgggtctaaacgatgaaattttagattttgaggggcagagtcccgtaggaagtctcttatgtggaagttttgatccttga 29036102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 40062283 - 40062323
Alignment:
Q  134 ctgaaaatcggatttttgactaagaacaactaacaatgacc 174  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  40062283 ctgaaaatcggatttttgattaagaacaactaataatgacc 40062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 51816585 - 51816537
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcc 59  Q
    ||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  51816585 taaacgatgaaaatttgaattttgaggggcagagtcccgtaagaagtcc 51816537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 49096100 - 49096199
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||| ||| |||||| | ||||||||||| || ||| | |||||   |||||||||| |||||||  |||||||||| ||||| |||||||||| |||||    
T  49096100 tttcgggggaagttttggagcaatccgatcaagtagcccgaaaactcgatttttgacgaagaacaggtaacaatgactcaaaacagaaggatgagagtta 49096199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 32025256 - 32025188
Alignment:
Q  9 tttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||||||||||||| | ||||||| ||| |||||||| |||||| |||||| ||||| ||||||||||    
T  32025256 tttaaacgatggaatttgggattttga-gggtggagtcccataagaa-tcccttctaagggagtcttgatc 32025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 40062617 - 40062542
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaa 221  Q
    ||||||||||||||||||||||| ||||||| |||| | |||||  | |||||   ||| ||||||||||||||||||    
T  40062617 gatttttgactaagaacaactaataatgacctaaaacaaaaggaccagagtta--ggaagattaatatggtctttaaa 40062542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 41300981 - 41300935
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    ||||||||||||||||  ||||||| ||| |||||||||||||||||    
T  41300981 taaacgatggaatttttgattttgatgggcggagtcccgtaagaagt 41300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 51540535 - 51540618
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||||   |||||||||||||||  |||||||||| |||||   ||| |||||||| |||  ||||||||||||    
T  51540535 gatttttgactaagaacgtgtaacaatgacccaaaggagaaggatgagagtta--ggaagattaatattgtccctaaaatgactat 51540618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 512223 - 512252
Alignment:
Q  200 gaatattaatatggtctttaaaatgactat 229  Q
    ||||||||||||||||||||||||||||||    
T  512223 gaatattaatatggtctttaaaatgactat 512252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 4300066 - 4300118
Alignment:
Q  12 aaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttata 65  Q
    |||||||| ||||||| ||||||||||  ||||||| |||||||||||||||||    
T  4300066 aaacgatgaaattttggattttgagggt-ggagtcctgtaagaagtcccttata 4300118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 19419789 - 19419716
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    ||||||| ||| ||||| ||||||||||| ||| |||  ||||||||| ||| ||| |||||||||||| ||||    
T  19419789 taaacgaaggagttttggattttgaggggcggaatcctataagaagtctcttctaaagaagtcttgatccttga 19419716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 47769487 - 47769417
Alignment:
Q  157 gaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||||| ||||||||| ||||| |||||  | || ||||||||| |  |||||||||||||    
T  47769487 gaacaactaacaatgacctaaaatagaatgatgatagtta--aaaagattaatatgattcttaaaatgactat 47769417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 51540408 - 51540477
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtc 73  Q
    |||||| ||||||||||| ||||| |||||||||||  || |||| | ||||||||||| ||||| ||||    
T  51540408 atgggtctaaacgatggagttttggattttgaggggcagaatcccatgagaagtcccttctaagggagtc 51540477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 27143291 - 27143323
Alignment:
Q  158 aacaactaacaatgacccaaaatagaaggatga 190  Q
    ||||||||||||||| |||||||||||||||||    
T  27143291 aacaactaacaatgatccaaaatagaaggatga 27143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 27143351 - 27143383
Alignment:
Q  158 aacaactaacaatgacccaaaatagaaggatga 190  Q
    ||||||||||||||| |||||||||||||||||    
T  27143351 aacaactaacaatgatccaaaatagaaggatga 27143383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 197
Target Start/End: Original strand, 7115050 - 7115244
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga-nnnnnnngtgagtttctg 102  Q
    |||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||         ||| ||||||    
T  7115050 atgggtctaaacaatggaattttggattttgagggaaggagtcccgtaagaagtcccttctaagggagtcttgatccttgattttttttctgattttctg 7115149  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttat 197  Q
     | |||||||  |||||| |||| || ||| | |||||   ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7115150 aggaagtttcagagcaatacgatcaagtagcccgaaaacacgatttttgactaagaacaactaacaatgaccaaaaatagaaggatgagagttat 7115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 36468320 - 36468513
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||  |||| |||| || || | ||        ||| |||||||    
T  36468320 atgggtctaaacgatgaaattttgaatcttgaggggcggagtcccgtaagaagtccctttaaagggagtcgtggtcctcgaattttc--tgattttctgg 36468417  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    | |||||||| ||||||||||| || ||| | ||||| | ||||||| ||||||||||  |||||||||||||||| |||||||||| ||||||||    
T  36468418 ggaagtttcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagttatga 36468513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 42925421 - 42925596
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||| |||| || || ||||        ||| |||||||    
T  42925421 atgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaagggagtcatggtccttgaattgtttctgattttctgg 42925520  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    | |||||||| ||||||||||| || ||| | ||||| |  |||||||||||||||||| ||||||||| ||||||    
T  42925521 gtaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttgactaagaacaagtaacaatgatccaaaa 42925596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 19225386 - 19225571
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||| |||| || || |||| || || ||||        ||| |||||||| |||||    
T  19225386 taaacgatggaattttggattttgaggggcggagtcctgtaagaagttccttctatgggagtcatgttccttgaattttttctgattttctggggaagtt 19225485  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||||| ||||| | ||||||||||||||||    |||||||||||||||| |||||||||| |||||    
T  19225486 tcggagcaatccgatcaaatagtccgaaaacctgatttttgactaagaatgggtaacaatgacccaaaacagaaggatgagagtta 19225571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 19818750 - 19818566
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| || || |||| || || ||||        ||| ||||||||||||||    
T  19818750 taaacgatggaattttggattt-gaggggtggagtcccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttctgggaaagtt 19818652  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || |||||  |||| | |||||| ||| |||||||  |||||||||||||||| |||||||||| |||||    
T  19818651 tcggagcaatccgatcaagtagtccaaaaacccgattttcgaccaagaacaggtaacaatgacccaaaacagaaggatgagagtta 19818566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 9152169 - 9151951
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| || || |||| || || ||||        |   ||||||     
T  9152169 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgattt-----tttttttctgt 9152075  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| ||||||||||| || |||||  |||| | ||||||| ||||||||||  |||||||||||||||| |||||||||| |||||   |||     
T  9152074 ggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacatgtaacaatgacccaaaacagaaggatgagagtta--ggaag 9151977  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  9151976 attaatattgtccctaaaatgactat 9151951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 3936393 - 3936294
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| ||  |||| ||||||| |||||||||||||||| |  ||||||||||||||||||||||||||| |||||    
T  3936393 tttctggggaagtttcggagcaatccgatcaagcagtccgaaaatccgatttttgactaagaataggtaacaatgacccaaaatagaaggatgagagtta 3936294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 196
Target Start/End: Complemental strand, 33151556 - 33151389
Alignment:
Q  28 aattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtttcgtagcaatccgatta 127  Q
    |||||||| ||| |||||||||||||||||||||| ||||| |||| || || ||||        ||| |||||||||| |||||| |  |||||||| |    
T  33151556 aattttgaagggtggagtcccgtaagaagtcccttctaagggagtcatggtccttgaattttttctgattttctgggaa-gtttcggaataatccgatca 33151458  T
Q  128 actagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | ||||| ||||| |  |||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  33151457 agtagtcagaaaacccaatttttgactaagaacagataacaatgacccaaaatagaaggatgagagtta 33151389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 1518992 - 1518866
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| ||||||||||| ||||||||||| || ||||| ||||| |  |||||| |||||||||| |||||||| ||||||||||||||||||| |||||    
T  1518992 tttctaggaaagtttcggagcaatccgatcaagtagtccgaaaaccctattttttactaagaacagctaacaataacccaaaatagaaggatgagagtta 1518893  T
Q  197 tgagaatattaatatggtctttaaaatga 225  Q
      |||| |||||||| |||  ||||||||    
T  1518892 --agaagattaatattgtccataaaatga 1518866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 43737460 - 43737237
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||  ||||||| |||| ||||| |||| || || ||||        ||| |||||||    
T  43737460 atgggtctaaacgatggaattttagattttgaggggcggagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctgg 43737361  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    |||| ||||| ||||||||||| || ||| | ||||| | | ||||| ||||||||||  |||||||||||||||| | |||||| | |||||   |||     
T  43737360 gaaaatttcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacatgtaacaatgacccaaaacataaggatcagagtta--ggaag 43737263  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  43737262 attaatattgtccctaaaatgactat 43737237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 36629574 - 36629389
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||| ||  |||||||||||||||||||||| || || |||| || || ||||        ||| ||| |||| |||||    
T  36629574 taaacgatggaattttggattttgaaggatggagtcccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttttggggaagtt 36629475  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||| | ||||| | ||||||||||||||| ||  ||||| ||| |||||| |||||||||| |||||    
T  36629474 tcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaccaggtaacagtgagccaaaacagaaggatgagagtta 36629389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 37518044 - 37518215
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||| ||| || || |||| || || ||||        ||| |||||||    
T  37518044 atgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtctcttctatgggagtcatggtccttgaattttttctgattttctgg 37518143  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgaccc 175  Q
    | |||||||| ||||||||||| || |||||  |||| |  |||||| ||||||||||  ||||||||||||    
T  37518144 ggaagtttcggagcaatccgatcaaatagtccaaaaacccaatttttaactaagaacaggtaacaatgaccc 37518215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 42864882 - 42865106
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctta-taaggaagtcttgatctttgannnnnnngtgagtttctg 102  Q
    |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||  ||||| |||| || || ||||        | | ||||||    
T  42864882 atgggtctaaacgattgaattttggattttgaggggcggagtcccataagaagtctctttctaagggagtcatggtccttgaattgtttctaattttctg 42864981  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    || | |||||  ||||||||||| || ||||| ||||| | |||||||||| |||||||  | |||||||||||||| |||||||||| |||||   |||    
T  42864982 gggatgtttcagagcaatccgatcaagtagtccgaaaacctgatttttgaccaagaacaggtgacaatgacccaaaacagaaggatgagagtta--ggaa 42865079  T
Q  203 tattaatatggtctttaaaatgactat 229  Q
     |||||||| |||  ||||||||||||    
T  42865080 gattaatattgtccctaaaatgactat 42865106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 43186156 - 43186083
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||| |||||||||| ||||    
T  43186156 taaacgatggaattttggatttttaggggcggagtcccgtaagaagtcccttctaagggagtcttgatccttga 43186083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 190
Target Start/End: Original strand, 26555031 - 26555124
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    ||||||||||||||||  ||||||||||| || ||| | ||||| | | ||||| ||||||||||  |||||||||||||||||||||||||||    
T  26555031 tttctgggaaagtttcagagcaatccgatcaagtagcccgaaaacccgtttttttactaagaacatgtaacaatgacccaaaatagaaggatga 26555124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 8155277 - 8155093
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||| || || |||| ||||| ||||        ||| ||| | |    
T  8155277 atgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagttccttgtacgggagtcatgatccttgaattttttctgatttttttg 8155178  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  | |||| |||| || ||||| ||||| | ||||||||||||||||||  ||| ||||||| |||| | ||||||    
T  8155177 ggaagtttcagaacaattcgatcaagtagtccgaaaacccgatttttgactaagaacaggtaataatgaccaaaaacaaaaggat 8155093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 31643418 - 31643235
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||  ||||||||||| ||||||||||| |||||||| |||||||| |||| ||||| |||| || || ||||        ||| ||| ||     
T  31643418 atgggtctaaataatggaattttggattttgaggggtggagtcccataagaagttccttctaagggagtcatggtccttgaattttttctgattttttgc 31643319  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||||| | ||| | ||||||||||||||||||  |||||||||||||||| | ||||||    
T  31643318 ggaagtttcagagcaatccgatcaagtagtccg-aaacccgatttttgactaagaacatgtaacaatgacccaaaacaaaaggat 31643235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 16278389 - 16278316
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||| ||||||| ||||||| | | |||||||||||||||||||||| ||||| ||||||||||    
T  16278389 gggtctaaacgatgaaattttggattttgatgtgcggagtcccgtaagaagtcccttctaagggagtcttgatc 16278316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 24041978 - 24042034
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccc 60  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  24041978 atgggtctaaacgatggagttttggattttgaggggcggagtcccgtaagaagtccc 24042034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 36408647 - 36408526
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatat 205  Q
    |||||||| ||||||||||| || ||||| ||||| |  |||||||||||||||||  |||||||||||||||| ||||| | || |||||  |||| ||    
T  36408647 aagtttcggagcaatccgatcaagtagtccgaaaaccaaatttttgactaagaacacgtaacaatgacccaaaacagaagaaagagagtta--agaagat 36408550  T
Q  206 taatatggtctttaaaatgactat 229  Q
    |||||| |||  |||||| |||||    
T  36408549 taatattgtccctaaaattactat 36408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 30861461 - 30861386
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||||| ||||||||| |||||||||||| |||||||||| ||| |||||||||||||| ||| | | ||||||||    
T  30861461 atgggtctaaacgatgaaattttgaatttcgaggggaggaatcctgtaagaagtcccttctaaaggattcttgatc 30861386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 36946166 - 36946265
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| |||||| |||| || ||  | ||||| | || |||||||||| |||||||||||||||||||||| | |||||||| |||||    
T  36946166 tttctggggaagtttcgaagcaattcgatcaagtatcccgaaaaccagaattttgactaataacaactaacaatgacccaaaacaaaaggatgagagtta 36946265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 37398765 - 37398864
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| || |||||||| ||||||| ||| || ||| || |||| || |||||| ||||||||||||||||||||||| |||| |||| ||||| |||||    
T  37398765 tttctagggaagtttcggagcaatctgatcaagtagcctaaaaaccgaattttttactaagaacaactaacaatgacctaaaacagaatgatgagagtta 37398864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 32701041 - 32701111
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtct 74  Q
    |||||| |||| |||||||| || ||||||||||||| ||| ||||||||||||||||| ||||| |||||    
T  32701041 atgggtctaaaagatggaatgttaaattttgaggggaagagccccgtaagaagtcccttctaagggagtct 32701111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33573829 - 33573887
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  33573829 atgggtctaaacaatgaaattttggattttgaggggcggagtcccgtaagaagtccctt 33573887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 47202865 - 47202807
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||| |||||||||||||    
T  47202865 atgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagtccctt 47202807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3304539 - 3304590
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  3304539 taaacaatgaaattttggattttgaggggcggagtcccgtaagaagtccctt 3304590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 5731067 - 5731133
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgat 78  Q
    |||| |||||||||||| ||||||||||  |||||| ||||||||||||||| ||||| |||||||||    
T  5731067 taaatgatggaattttggattttgagggt-ggagtctcgtaagaagtcccttctaagggagtcttgat 5731133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 24690124 - 24690307
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||| |||||||| |||||||||||   ||||| |||||||||||||   |||| |||| ||||| ||||        ||| ||| |||  |||||    
T  24690124 taaacgattgaattttggattttgaggggtaaagtcctgtaagaagtccct---aagggagtcatgatccttgaattttttctgattttatggagaagtt 24690220  T
Q  111 tcgtagcaatccgattaactagtctgaaaa-tcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||| | ||||| || |||| ||||||||||||   |||||||||||||||| | |||||||| |||||    
T  24690221 tcggagcaatccgatcaagtagcccgaaaaatccgattattgactaagaacgggtaacaatgacccaaaacaaaaggatgagagtta 24690307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 39581984 - 39581922
Alignment:
Q  137 aaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    |||| |||||||||||| ||||| |||||||||||||| |||| ||||| |||| ||||||||    
T  39581984 aaaaccggatttttgacgaagaataactaacaatgacctaaaacagaagaatgagagttatga 39581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 48776092 - 48776166
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaat 180  Q
    |||||||| ||||||| |||||| |||   |||||||  ||||||||||||||||||||| |||||||| |||||    
T  48776092 aagtttcggagcaatctgattaagtagctcgaaaatcaaatttttgactaagaacaactagcaatgacctaaaat 48776166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 8214377 - 8214450
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| |||||||||||| ||| ||||||| | |||| ||||||||||||||| ||||| || |||||||    
T  8214377 gggtctaaaagatggaattttggattgtgaggggcgaagtctcgtaagaagtcccttctaagggagccttgatc 8214450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 6467062 - 6467113
Alignment:
Q  145 atttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| |||||||||| |||||||||||| |||||||||||| || |||||    
T  6467062 atttttaactaagaacagctaacaatgacctaaaatagaaggaagagagtta 6467113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26554944 - 26554995
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaa 55  Q
    |||||| ||||||||||||||||| |||||||||||  ||||||| ||||||    
T  26554944 atgggtctaaacgatggaattttggattttgaggggcagagtcccataagaa 26554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 28230392 - 28230472
Alignment:
Q  147 ttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||   ||||||||||||||| |||||||||| |||||   ||| |||||||| |||  ||||||||||||    
T  28230392 ttttgactaagaacatgcaacaatgacccaaaacagaaggatgagagtta--ggaagattaatattgtccataaaatgactat 28230472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 47239506 - 47239557
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||| ||||||| |||||||| || | ||||||||||||||||||||    
T  47239506 taaacgatgaaattttggattttgagaggcgaagtcccgtaagaagtccctt 47239557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 48705780 - 48705838
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| ||||||||| ||||||| | ||||||||| |||||||  |||||||||||||    
T  48705780 atgggtctaaacgatgaaattttggaatttgaggggcggagtcctataagaagtccctt 48705838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 3304641 - 3304714
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||  ||||||||||| || ||| | || || | ||||||||||||||||||  ||||||||||||||||    
T  3304641 aagtttcagagcaatccgatcaagtagcccgagaacccgatttttgactaagaacaggtaacaatgacccaaaa 3304714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 5278501 - 5278419
Alignment:
Q  145 atttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||| |||||||||||  ||||||||||||||||| |||||||| | |||||   ||| ||||||||  || |||||||||||||    
T  5278501 atttgtgactaagaacggctaacaatgacccaaaacagaaggataagagtta--ggaagattaatattatccttaaaatgactat 5278419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 6466918 - 6466971
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    |||||| ||||||||| ||||||  ||||||||||| |||||||| ||||||||    
T  6466918 atgggtctaaacgatgaaattttagattttgaggggcggagtcccataagaagt 6466971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 31985438 - 31985521
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||||   |||||||||||||||| |||| ||||| ||||| || || |||||||| |||  ||||||||||||    
T  31985438 gatttttgactaagaacggttaacaatgacccaaaacagaatgatgagagtta-ga-aagattaatattgtccataaaatgactat 31985521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 28230273 - 28230317
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtccc 48  Q
    |||||| ||||||||||||||||  ||||||||||| ||||||||    
T  28230273 atgggtctaaacgatggaattttagattttgaggggtggagtccc 28230317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 21514812 - 21515035
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng-tgagtttctg 102  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||| | |||| ||||         | | ||| ||    
T  21514812 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaagggagtat-gatccttgaatttttttctaattttatg 21514910  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    || |||||||| ||||||||||| || ||||| ||||||| ||||||||||||||||||  |||||||||||||||  |||||||||| |||||   |||    
T  21514911 gggaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaggtaacaatgacccaaaggagaaggatgagagtta--ggaa 21515008  T
Q  203 tattaatatggtctttaaaatgactat 229  Q
     |||||||| |||  ||||||||||||    
T  21515009 gattaatattgtccctaaaatgactat 21515035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 4508083 - 4508306
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||| ||| |  || |||| || || ||||        ||| ||||||     
T  4508083 atgggtctaaacgatggaattttggattttgaggggcggagtcccttaagaagtctcttctgtgggagtcatggtccttgaattgtttctgattttctgc 4508182  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| |||||||| || || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| ||||||||||||||||   |||     
T  4508183 ggaagtttcggagcaatccaatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgaaagtta--ggaag 4508280  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  4508281 attaatattgtccctaaaatgactat 4508306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 3717063 - 3717287
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||||  |||||||||| ||||||||||| |||||||||||||||||| ||| || || || | || || ||||        ||| ||| |||    
T  3717063 atgggtctaaacagtggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagccatggtccttgaattttttctgattttttgg 3717162  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgaccc-aaaatagaaggatgaaagttatgagaa 202  Q
    | | |||||| ||||||||||| || ||||||||||| | ||||||||||||||||||  |||||||||||| |||| |||||||||| ||||| || ||    
T  3717163 ggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgtaacaatgacccaaaaacagaaggatgagagtta-ga-aa 3717260  T
Q  203 tattaatatggtctttaaaatgactat 229  Q
     |||||||| |||  ||||||||||||    
T  3717261 aattaatattgtccctaaaatgactat 3717287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 2813003 - 2813180
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngt--gagtttct 101  Q
    |||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||||| || ||||| |||| || || ||||        |  || |||||    
T  2813003 atgggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagtccattctaagggagtcatggtccttgaattttttttctgattttct 2813102  T
Q  102 gggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    ||| |||||||| ||||||||||| || ||| | ||||| | ||||||||||||||||||  ||||||||||||||||    
T  2813103 ggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaa 2813180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 2539822 - 2539606
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||| ||| || |  |||| || || ||||        ||| |||||||| |||||    
T  2539822 taaacgattgaattttggattttgaggggcggagtcccgtaagaagtcacttctatgagagtcatggtccttgaattttttctgattttctgggcaagtt 2539723  T
Q  111 tcgtagcaatccgattaactagtctgaaaa-tcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    ||| ||||||||||| || ||||| ||||| |||| ||||| |||| ||| |  |||||||||||||||| |||||||||| |||||   ||| ||||||    
T  2539722 tcggagcaatccgatcaagtagtccgaaaactcgg-tttttaactacgaataggtaacaatgacccaaaacagaaggatgagagtta--ggaagattaat 2539626  T
Q  210 atggtctttaaaatgactat 229  Q
    || |||  ||||||||||||    
T  2539625 attgtccctaaaatgactat 2539606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 5699851 - 5699720
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgaccc-aaaatagaaggatgaaagtt 195  Q
    |||||||| |||||||| ||||||||||| || ||||| ||||  | |||||||||||||||| |  |||||||||||| |||| |||||||||| ||||    
T  5699851 tttctggggaagtttcggagcaatccgatcaagtagtccgaaatcccgatttttgactaagaataggtaacaatgacccaaaaacagaaggatgagagtt 5699752  T
Q  196 atgagaatattaatatggtctttaaaatgactat 229  Q
    ||  ||| |||||||| ||| |||||||||||||    
T  5699751 at--gaagattaatattgtccttaaaatgactat 5699720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 13800901 - 13801000
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| || |||||||| ||||||||||| || ||||   |||||| |||||||||||||||||||||||||||||||||||| | || ||||| |||||    
T  13800901 tttctaggcaagtttcggagcaatccgatcaagtagttcaaaaatccgatttttgactaagaacaactaacaatgacccaaaacataatgatgagagtta 13801000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 24604144 - 24604365
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| |||||| |||||||||| |||||||| || ||||| ||| |||||||||||| ||||| |||| ||||| ||||        | | ||||| ||     
T  24604144 gggtctaaacggtggaattttggattttgagaggcggagttccgcaagaagtcccttctaagggagtcatgatccttgaatttttttttattttctaggg 24604243  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatat 205  Q
    | |||| | ||||||  ||| || ||| |  |||| | ||||||||||||||||||  |||||||||| ||||| ||||||||||||||||   ||| ||    
T  24604244 atgtttagaagcaatgtgatcaagtagcccaaaaacccgatttttgactaagaacaggtaacaatgactcaaaacagaaggatgaaagtta--ggaagat 24604341  T
Q  206 taatatggtctttaaaatgactat 229  Q
    |||||| |||| ||||||||||||    
T  24604342 taatattgtctctaaaatgactat 24604365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 14587346 - 14587564
Alignment:
Q  8 gtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaa 107  Q
    |||||||| ||||||||||| |||||||| || ||||||||||||||||| |||| ||||| ||||||| || ||||        | | |||||||| ||    
T  14587346 gtttaaacaatggaattttggattttgagtggcggagtcccgtaagaagttccttctaagggagtcttggtccttgaattttttctaattttctggg-aa 14587444  T
Q  108 gtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatatta 207  Q
    |||||| |||||||| || || ||| |  ||||||   ||||| ||||||||||  |||||||||||||||| | |||||| | |||||   ||| ||||    
T  14587445 gtttcgaagcaatccaatcaagtagcccaaaaatccatttttttactaagaacatgtaacaatgacccaaaacataaggattagagtta--ggaagatta 14587542  T
Q  208 atatggtctttaaaatgactat 229  Q
    |||| |||  ||||||||||||    
T  14587543 atattgtccgtaaaatgactat 14587564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 237169 - 237112
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataagg 68  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||    
T  237169 taaacgatggaattttggattttgaggggcggagtcccgtaagaagacccttctaagg 237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 14037886 - 14037958
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaa 221  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||   ||||  |||| ||||||||||||||||||    
T  14037886 gatttttgactaagaacaactaacaatgacctaaaacagaaggatg---gtta--agaagattaatatggtctttaaa 14037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 5639232 - 5639185
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5639232 taaacgatggaattttggattttgaggggcggagtcccgtaagaagtc 5639185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 5699969 - 5699918
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  5699969 taaacgatggaattttggattttgaggggcggagtcccgtaagaagttcctt 5699918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 9905434 - 9905388
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  9905434 taaacgatggaattttggattttgaggggcggagtcccgtaagaagt 9905388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 34528716 - 34528626
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| | ||||||||||| || ||| | ||||| | |||||||||||||||||| |||| |||||||||||| ||||| |||| |||||    
T  34528716 aagttttggagcaatccgatcaagtagaccgaaaaccagatttttgactaagaacagctaataatgacccaaaacagaagaatgagagtta 34528626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 10310345 - 10310435
Alignment:
Q  137 aaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    ||||| |||||||||||| ||||||||| ||||| ||| |||||||||| |||| |||||   ||| |||||||||||| ||||| |||||||    
T  10310345 aaaattggatttttgactgagaacaacttacaataacctaaaatagaagaatgatagtta--ggaagattaatatggtccttaaattgactat 10310435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 16450589 - 16450521
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||||||||||||| ||||||| ||| |||||| | |||| |||||||| |||| |||||||||||    
T  16450589 taaacgatggaattttggattttgatgggcggagtctcataagtagtcccttttaagaaagtcttgatc 16450521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 17264780 - 17264596
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| ||||||||||  | |||||||||||||||||||| || || |||| || || ||||        ||| |||||||| |||||    
T  17264780 taaacgatgaaattttggattttgagggacgaagtcccgtaagaagtcccttctaggggagtcatggtccttgaatttttc-tgattttctggggaagtt 17264682  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| |||||||| || || ||| |  ||||    |||||| ||||||||||  |||||||||| ||||| |||||||||| |||||    
T  17264681 tcggagcaatcccatcaagtagcccaaaaactcaatttttaactaagaacaggtaacaatgacgcaaaacagaaggatgagagtta 17264596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 29289499 - 29289591
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatg 189  Q
    |||||||| |||||||| ||||||  ||| || |||   ||||| | |||||||||||||||||| |||||||||||| |||| |||||||||    
T  29289499 tttctggggaagtttcggagcaatttgatcaagtagcacgaaaacctgatttttgactaagaacatctaacaatgacctaaaacagaaggatg 29289591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 29519517 - 29519465
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||| |||||    
T  29519517 gatttttgaccaagaacacgtaacaatgacccaaaatagaaggatgatagtta 29519465  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 1945365 - 1945416
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||||    
T  1945365 gggtctaaacgttggaattttggattttgaggggcggagtcccgtaagaagt 1945416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 3365942 - 3365851
Alignment:
Q  105 aaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||| ||||||  ||| || ||  ||||||| ||||||||||| |  |||||| ||||||||||| |||| ||||||||||||||||    
T  3365942 aaagtttcggagcaatatgatcaagtaacctgaaaaccggatttttgagtgtgaacaattaacaatgacctaaaacagaaggatgaaagtta 3365851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 237018 - 236953
Alignment:
Q  158 aacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatga 225  Q
    ||||||||||||||||| ||||||||| ||||| |||||   ||| |||||||||||| |||||||||    
T  237018 aacaactaacaatgacctaaaatagaacgatgagagtta--ggaagattaatatggtccttaaaatga 236953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 7413035 - 7412971
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaaca 161  Q
    |||||| | |||||||| ||||||||||| |||||||| ||||| | |||||||| |||||||||    
T  7413035 tttctgtggaagtttcggagcaatccgatcaactagtccgaaaacctgatttttggctaagaaca 7412971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 9905391 - 9905309
Alignment:
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    |||||||| ||||||||||| || ||| | ||||| | ||||||||||||||||    |||||||||| ||||| ||||||||    
T  9905391 aagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaattggtaacaatgactcaaaacagaaggat 9905309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 23407082 - 23407000
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||| |||||||| |||||||  || || ||| | |||||   ||||||||||||||||||| ||| ||||||||||||    
T  23407082 tttctggggaagtttcggagcaatcaaatcaagtagcccgaaaacttgatttttgactaagaacaagtaataatgacccaaaa 23407000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 17501363 - 17501291
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||| ||||||| ||||||| ||  |||||||||||| ||||||||| ||| | ||||||||||    
T  17501363 gggtgtaaacgatgaaattttggattttgatggc-ggagtcccgtaaaaagtcccttctaaaggagtcttgatc 17501291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 14037753 - 14037801
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcc 59  Q
    ||||||||||||| ||| ||||||||| |  ||||||||||||||||||    
T  14037753 taaacgatggaatgttggattttgaggagcagagtcccgtaagaagtcc 14037801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 9279 - 9501
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| || ||||| ||||  | || ||||        ||| ||||| |    
T  9279 atgggtctaaacgatggtattttgaattttgaggggcggagtcccgtaagaagtcc-ttctaagggagtcaaggtccttgaattttctctgattttctag 9377  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||  ||||||||||| || || || ||||||| ||||||| ||||||||||  |||||||||||||||| |||| ||||||||||||   |||    
T  9378 gcaagtttcagagcaatccgatcaagtaatccgaaaatccgatttttaactaagaacatgtaacaatgacccaaaacagaatgatgaaagttat--aaat 9475  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  9476 attaatattgtccataaaatgactat 9501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 41584446 - 41584669
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||  ||| ||||||| |||||||||||||||||||||| || || |||| || || ||||        ||| |||||||    
T  41584446 atgggtctaaacaatggaattttagattgtgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaattttttctgattttctgg 41584545  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    | |||||||| ||||||||||| || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| |||||||||| |||||   |||     
T  41584546 gcaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacccaaaacagaaggatgagagtta--ggaag 41584643  T
Q  204 attaatatggtctttaaaatgactat 229  Q
    |||||||| |||  ||||||||||||    
T  41584644 attaatattgtccataaaatgactat 41584669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 52744631 - 52744816
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| |||||||||||||||| || ||||||  |||||||||||||| || |  |||| || || ||||        ||| |||||||| |||||    
T  52744631 taaacgatgaaattttgaattttgagaggtggagtcttgtaagaagtcccttctatgagagtcatggtccttgaattttttctgattttctggggaagtt 52744730  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||||| ||||| |  |||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  52744731 tcggagcaatccgatcaagtagtccgaaaacccaatttttgactaagaacaagtaacaatgacccaaaacagaaggatgagagtta 52744816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 34006630 - 34006447
Alignment:
Q  13 aacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtttc 112  Q
    ||||||| ||||||| ||||||||||  |||||||||||||||||||||| || || |||| ||||| ||||        ||| |||||||| |||||||    
T  34006630 aacgatgaaattttggattttgagggacggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctggggaagtttc 34006531  T
Q  113 gtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | ||||||||||| || ||| | ||||| |  |||||||||||||||||  || ||||||| |||||||||||||||| |||||    
T  34006530 ggagcaatccgatcaagtagcccgaaaacctaatttttgactaagaacaggtagcaatgacacaaaatagaaggatgagagtta 34006447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 40907715 - 40907889
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||| || |  |||| ||||| ||||        ||| |||||||    
T  40907715 atgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttttatgagagtcatgatccttgaattttttctgattttctgg 40907814  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaa 178  Q
    | |||||||| ||||||||||| || ||||| ||||| | ||||||| ||||| ||||  |||||||||||||||    
T  40907815 ggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaacaacaggtaacaatgacccaaa 40907889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 45046638 - 45046823
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||||||| ||||| |||| || || ||||        ||| ||| |||| |||||    
T  45046638 taaacgatggaattttggattttgaggggcggagtctcataagaagtcccttctaagggagtcatggtccttgaattttttctgattttttgggcaagtt 45046737  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||||||| || ||| | ||||| | | ||||| ||||||||||  |||||||||||||||| |||||||||| |||||    
T  45046738 tcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacaggtaacaatgacccaaaacagaaggatgagagtta 45046823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 28866411 - 28866606
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||||| ||||| |||| ||||| ||||  | || ||||        | | ||| |||    
T  28866411 atgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaggaagtgccttctaagggagtcacggtccttgaattttttctaattttttgg 28866510  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    | |||||||| ||||||||||| || ||||| ||||  | ||||||||||||||||||  |||||||| ||||||| |||||||||| ||||||||    
T  28866511 ggaagtttcggagcaatccgatcaagtagtccgaaataccgatttttgactaagaacaggtaacaatgtcccaaaacagaaggatgagagttatga 28866606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 38885591 - 38885371
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||  | |  |||  || |  ||||        | | ||| |||    
T  38885591 atgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaagtcccttccaggagagttatggtgcttgaatttttttttattttttgg 38885492  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaat 203  Q
    |||||||||| ||||||||||| || ||| | ||||| |  |||||| ||||||||||| |||||||||||||||| |||||||||| |||||   |||     
T  38885491 gaaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagtta--ggaaa 38885394  T
Q  204 attaatatggtctttaaaatgac 226  Q
    |||||||| ||| ||||||||||    
T  38885393 attaatattgtccttaaaatgac 38885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 6223541 - 6223724
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||||||||||| ||||||||||| || |||| |||||||||| ||| ||||| |||| ||||| ||||        ||| ||||||||||||||    
T  6223541 taaacgatggaattttggattttgaggggcggtgtcc-gtaagaagtctcttctaagggagtcatgatccttgaatttttc-tgattttctgggaaagtt 6223638  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||  ||||||||||| || ||| | ||||| | ||||||||||||||||||  ||||||||||| |||| ||||| |||| |||||    
T  6223639 tcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacctaaaacagaagaatgatagtta 6223724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 18583325 - 18583509
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||| ||| || || |||| || || ||||        ||| ||| |||    
T  18583325 atgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtctcttctatgggagtcgtggtccttgaatttgttctgattttttgg 18583424  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| | ||||||    
T  18583425 ggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggat 18583509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 15069716 - 15069845
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||||||| ||||||||||| || |||   ||||||| ||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||    
T  15069716 tttctgggaaagtttcg-agcaatccgatcaagtagctcgaaaatccgatttttaactaagaacaagtaacaatgatccaaaacagaaggatgaaagtta 15069814  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
        || |||||||| |||| ||||||||||||    
T  15069815 --gtaagattaatattgtctctaaaatgactat 15069845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 42546345 - 42546153
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||| |||| ||||| |||| || || || |        ||| |||||||    
T  42546345 atgggtctaaacgatggaattttggattttga-gggcggagtcccgtaagaagttccttctaagggagtcatggtccttaaattttttctgattttctgg 42546247  T
Q  104 gaaagtttcgtagcaatccgattaactagtctg-aaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| ||||||||||| || ||| | | |||| | | ||||| ||||||||||  |||||||||||||||| |||||||||| |||||    
T  42546246 ggaagtttcggagcaatccgatcaagtagcccgaaaaacccggtttttaactaagaacagataacaatgacccaaaacagaaggatgagagtta 42546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 24472609 - 24472800
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||| ||| ||||||||| |||||||||||| || || |||||||||| ||||        ||| |||||||    
T  24472609 atgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctatgggagtcttgatccttgattttttc-tgattttctgg 24472707  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| |||||||| || || | | |   ||||  |||||||||||||||||| |||||||||||| |||| ||||| |||| |||||    
T  24472708 ggaagtttcggagcaatccaatcaagttgcccacaaattcgatttttgactaagaacagctaacaatgaccaaaaacagaagaatgatagtta 24472800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 3561123 - 3561308
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||| |||| ||||||||||||||||||| ||||  ||  |||||||| ||| || || |||||||||  ||||        ||| ||| ||||||||||    
T  3561123 taaaagatgaaattttgaattttgaggggcggagctccacaagaagtcacttctatgggagtcttgattcttgattgttttctgattttatgggaaagtt 3561222  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||| ||||||| ||| || ||  |  || ||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||||    
T  3561223 tcggagcaatctgatcaagtaacccaaagatcggatttttgactaagaacaactaacaatgacctaaaacagaatgatgagagtta 3561308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 33611191 - 33611375
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||| ||||||||||| ||||||||||  | |||||||||||||||||||| || |||||||  | || | ||        ||| ||| |||    
T  33611191 atgggtctaaacaatggaattttggattttgagggacgtagtcccgtaagaagtcccttttatggaagtcacggtcctcgaattttttctgattttttgg 33611290  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||| | ||||| | ||||||||||||||||||  |||||||||||||||| | ||||||    
T  33611291 ggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggat 33611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 49677834 - 49677783
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49677834 taaacgatggaattttgaattttgaggggcggagtcccgtaagaagtccctt 49677783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 25563288 - 25563418
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| || |||||||| ||||||||||| || |||   ||| ||||||||||||||||| ||||||||||||||||| |||| | ||||||||  ||||    
T  25563288 tttcttgggaagtttcggagcaatccgatcaagtagctcgaatatcggatttttgactaataacaactaacaatgacctaaaacaaaaggatgagggtta 25563387  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
    |  |||  ||||||| ||| |||||||||||||    
T  25563388 t--gaagcttaatattgtccttaaaatgactat 25563418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 49677768 - 49677638
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || ||| ||||||| | ||||||| ||||||||||  |||||||||||||||| | ||| |||| |||||    
T  49677768 tttctggggaagtttcggagcaatccgatcaagtaggctgaaaacccgatttttaactaagaacatgtaacaatgacccaaaacataagaatgagagtta 49677669  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
       ||| |||||||| |||  ||||||||||||    
T  49677668 --ggaagattaatattgtccctaaaatgactat 49677638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 800681 - 800748
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| ||||||||||    
T  800681 taaacgatggaattttggattttgagggcag-agtcccgtaagaagtcccttctaagggagtcttgatc 800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 27795206 - 27794986
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||||||| ||||||| ||||||||||| ||||||| |||||||||| ||| ||    |||| ||||| ||||        ||| |||||| |     
T  27795206 gggtctaaacgatgaaattttggattttgaggggcggagtcctgtaagaagtctcttctacaagagtcatgatccttgaattttttctgattttctgtgg 27795107  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatat 205  Q
    |||||||| ||||||||||| || ||| |  |||| | ||| ||||||||||||||  |||||||||||||||| |||| ||||| |||||   ||| ||    
T  27795106 aagtttcggagcaatccgatcaagtagcccaaaaacccgatgtttgactaagaacaggtaacaatgacccaaaacagaa-gatgatagtta--ggaagat 27795010  T
Q  206 taatatggtctttaaaatgactat 229  Q
    |||||| |||  ||||||||||||    
T  27795009 taatattgtccataaaatgactat 27794986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 7011495 - 7011365
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| | |||||| ||||||||||| || ||| | ||||| | ||||||||||||| ||||  | ||||||||| |||| |||||||||| |||||    
T  7011495 tttctggggatgtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaaaaacaggttacaatgacctaaaacagaaggatgagagtta 7011396  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
      |||| |||||||| |||  ||||||||||||    
T  7011395 --agaagattaatattgtccctaaaatgactat 7011365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43319068 - 43319140
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| |||||||||||| ||||||||||  |||||||||||||||||| ||| ||||||||||||||||    
T  43319068 gggtgtaaatgatggaattttggattttgagggc-ggagtcccgtaagaagtctcttctaaggaagtcttgatc 43319140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 42929165 - 42929044
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgag 200  Q
    ||||||||||||| ||||||| ||| || |||   ||||| | ||||||||||| ||||||||||||||||| | |||| | ||| |||| |||||  ||    
T  42929165 tgggaaagtttcggagcaatctgatcaagtagctcgaaaaccagatttttgactgagaacaactaacaatgatctaaaacataagaatgagagtta--ag 42929068  T
Q  201 aatattaatatggtctttaaaatg 224  Q
    || |||||||||||| ||||||||    
T  42929067 aaaattaatatggtccttaaaatg 42929044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 229
Target Start/End: Original strand, 45567768 - 45567894
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgag 200  Q
    |||| |||||||| ||||||||||| || ||||| ||||| | ||||||| ||||||||||  |||||||||||||||| | | |||||| ||||| ||     
T  45567768 tggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaatgacccaaaacaaatggatgagagtta-ga- 45567865  T
Q  201 aatattaatatggtctttaaaatgactat 229  Q
    || |||||||| |||  ||||||||||||    
T  45567866 aagattaatattgtccctaaaatgactat 45567894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 23443019 - 23442932
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    |||| |||||||  ||||||||||| || ||||| ||||| | ||||||||||||||||||  |||||||||||||||| | ||||||    
T  23443019 tggggaagtttcagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacccaaaacaaaaggat 23442932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 26723362 - 26723449
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaa 184  Q
    |||||||| |||||||| ||||||||||| || |||||  |||| | ||||||| ||||||||||  |||||||||| ||||||||||    
T  26723362 tttctggggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacagataacaatgactcaaaatagaa 26723449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 17000664 - 17000582
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||| |||||||| |||||||| || || ||| | ||||||  ||||||||||||||||||  ||||||||||||||||    
T  17000664 tttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacccaaaa 17000582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 41584362 - 41584420
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| ||||| ||||||||||  ||||||||||| ||||||||||||||||||||||    
T  41584362 atgggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtccctt 41584420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 9445972 - 9446044
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| ||||||||| ||||||| ||||||||||  ||||||||||||||| |||||| ||||| ||||||||||    
T  9445972 gggtctaaacgatgaaattttggattttgagggc-ggagtcccgtaagaaatcccttctaagggagtcttgatc 9446044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 45880030 - 45880082
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||| || |||||||||||||| |||| ||||||||||||||||    
T  45880030 gatttttgactaaaaaaaactaacaatgacctaaaacagaaggatgaaagtta 45880082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 49786646 - 49786462
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||| | ||||||||| ||| || || |||| || || ||||        ||| ||| |||    
T  49786646 atgggtttgaacaatggaattttggattttgaggggcggagtctcataagaagtctcttctacgggagtcatggtccttgaattttttctgattttttgg 49786547  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggat 188  Q
    | |||||||  ||||||||||| || ||| | |||||   ||||||||||||| ||||  ||||| |||||||||| | ||||||    
T  49786546 ggaagtttcagagcaatccgatcaagtaggccgaaaacttgatttttgactaaaaacatgtaacattgacccaaaacaaaaggat 49786462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 8704307 - 8704357
Alignment:
Q  12 aaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||||| ||||||| ||||||||||| | ||||||||||||||||||||    
T  8704307 aaacgatgaaattttggattttgaggggtgtagtcccgtaagaagtccctt 8704357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 34162595 - 34162677
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
    |||||||| |||||||| ||||| || || || ||| | ||||||  ||||||||||||||||||  ||||||||||||||||    
T  34162595 tttctggggaagtttcggagcaaaccaatcaagtagcccgaaaattcgatttttgactaagaacatgtaacaatgacccaaaa 34162677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 44573021 - 44573101
Alignment:
Q  147 ttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    |||||||||||||||| ||||||||| |||||| |||||||||| ||||| || || |||||||| |||  ||||||||||||    
T  44573021 ttttgactaagaacaagtaacaatgatccaaaacagaaggatgagagtta-ga-aagattaatattgtccctaaaatgactat 44573101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 40650485 - 40650529
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtccc 48  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||    
T  40650485 atgggtctaaacgatggaattttggattttgaggggcggagtccc 40650529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 40650549 - 40650648
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaa-tcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtt 195  Q
    |||||| | |||||||| ||||||||||| || ||| | ||||| |||| ||||| ||||||||||  |||||||||||||||  |||||||||| ||||    
T  40650549 tttctgaggaagtttcggagcaatccgatcaagtagcccgaaaactcgg-tttttaactaagaacaggtaacaatgacccaaacgagaaggatgagagtt 40650647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 44572888 - 44572935
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    |||||||| |||||||||||||||| ||| |||||||| |||||||||    
T  44572888 taaacgatagaattttgaattttgatgggcggagtcccctaagaagtc 44572935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 38131256 - 38131188
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    ||||||||||| ||||| |||||||||||  |||||||| ||||||| | || || || ||||||||||    
T  38131256 taaacgatggagttttggattttgaggggcagagtcccgaaagaagttcattttaggggagtcttgatc 38131188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 43318862 - 43318929
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| ||||||| |||||||||| || |||||||||||||||| ||| ||||| | ||||||||    
T  43318862 taaatgatgaaattttggattttgagggcag-agtcccgtaagaagtctcttctaagggaatcttgatc 43318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 30764031 - 30763804
Alignment:
Q  1 aatatgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga-nnnnnnngtgagttt 99  Q
    ||||||||| || |||||| ||||||| ||||||||||| |||||||||||||||||||||| || |  |||||||||||||||         ||| |||    
T  30764031 aatatgggtctagacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctatgagagtcttgatctttgattttttttctgatttt 30763932  T
Q  100 ctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||| | |||||||| ||||||||||| || | | |  |||||| |||||||||||||||||| |||||||||||| |||| |||| ||||| |||||       
T  30763931 ctgaggaagtttcggagcaatccgatcaagttgcccaaaaatcagatttttgactaagaacagctaacaatgaccaaaaacagaaagatgagagtta--g 30763834  T
Q  200 gaatattaatatggtctttaaaatgactat 229  Q
    ||| |||||||| |||  ||||||||||||    
T  30763833 gaagattaatattgtccataaaatgactat 30763804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 42894755 - 42894563
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||| |||| || || ||||        | | |||||||    
T  42894755 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagttccttctaagggagtcatggtccttgaattttttctaattttctgg 42894656  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    | |||||||| || |||||||| || ||||| |||||   |||||||| |||||||||  |||||||||||||||| ||||||| || |||||    
T  42894655 ggaagtttcggagtaatccgatcaagtagtccgaaaactcgatttttgcctaagaacatgtaacaatgacccaaaacagaaggaagagagtta 42894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 34517474 - 34517284
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngt--gagtttctgggaaag 108  Q
    ||||||||||||||||| ||||||||| | ||| |||||||||||||||||| || || |||| ||||| ||||        |  || |||||||| |||    
T  34517474 taaacgatggaattttggattttgaggtgcggaatcccgtaagaagtcccttctatgggagtcatgatccttgaattttttttctgactttctgggtaag 34517375  T
Q  109 tttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatga 199  Q
    ||||| ||||||||||| || || || ||||| |  |||||||||||||||||  |||||||||||||||| | |||||||||||||||||    
T  34517374 tttcggagcaatccgatcaagtattccgaaaacccaatttttgactaagaacaggtaacaatgacccaaaacaaaaggatgaaagttatga 34517284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 38065353 - 38065539
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||  | |||| ||||| ||||        ||| ||| |||    
T  38065353 atgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtctcttctacaggagtcatgatccttgaattttttctgattttatgg 38065452  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    |||||||||| ||||||||||| || ||| |||||||||  |||||| ||||||||||  ||||||| |||||||| ||||| ||||    
T  38065453 gaaagtttcggagcaatccgatcaaatagcctgaaaatctaattttttactaagaacaggtaacaataacccaaaacagaagaatga 38065539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 35251215 - 35251093
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||||||| ||||||| ||| || ||| | ||||| |||||||| |||||||||||||||||||||||| |||||||||||||   |||||    
T  35251215 tttctgggaaagtttcggagcaatctgatcaagtagcccgaaaaccggattttcgactaagaacaactaacaatgacctaaaatagaaggataggagtta 35251116  T
Q  197 tgagaatattaatatggtctttaaa 221  Q
      |||| |||||||||||| |||||    
T  35251115 --agaagattaatatggtccttaaa 35251093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 33452218 - 33452411
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga-nnnnnnngtgagtttctg 102  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| || || |||| || || ||||         ||| ||||||    
T  33452218 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcgcttttatgggagtcatggtccttgattttttttctgattttctg 33452317  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||| ||||||||||| || |||||   ||| | ||||||||||||||||||  |||||| ||||||||| | ||| |||| |||||    
T  33452318 ggaaagtttcggagcaatccgatcaagtagtccagaaacccgatttttgactaagaacagataacaaagacccaaaacaaaagaatgagagtta 33452411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 38308610 - 38308829
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||| ||||||||||| ||||||||||| |||||||  ||| || |||||| ||||| |||| ||||| ||||        ||| ||||||||     
T  38308610 gggtctaaacaatggaattttggattttgaggggcggagtccaataaaaattcccttctaagggagtcatgatccttgaattttttctgattttctgggg 38308709  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatat 205  Q
    |||||||  ||||||| ||| || ||| | ||||  | ||||||||||||||||||  |||||| ||||||||| |||||||||| |||||| |||| ||    
T  38308710 aagtttcagagcaatctgatcaagtagcccgaaatcccgatttttgactaagaacaggtaacaa-gacccaaaacagaaggatgatagttataagaagat 38308808  T
Q  206 taatatggtctttaaaatgac 226  Q
    |||||| |||  |||||||||    
T  38308809 taatattgtccataaaatgac 38308829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 41510207 - 41510428
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctggga 105  Q
    |||| ||||||||| ||||||| ||||||||||| |||||||| |||||||| |||| ||||  |||| || || ||||        ||| ||||| ||     
T  41510207 gggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagttccttctaagagagtcatggtccttgaattttttctgattttctaggg 41510306  T
Q  106 aagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatat 205  Q
    |||||||| ||||||||||| || ||| | ||||| |   ||||| ||||||||||| |||||||||||||||| |||||||||| |||||   ||| ||    
T  41510307 aagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacaagtaacaatgacccaaaacagaaggatgagagtta--ggaagat 41510404  T
Q  206 taatatggtctttaaaatgactat 229  Q
    |||||| |||  ||||||||||||    
T  41510405 taatattgtccctaaaatgactat 41510428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 27670874 - 27670723
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||| ||||| |||| || || ||||        ||| ||| |||    
T  27670874 atgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaggtctcttctaagggagtcatggtcgttgaattttttctgattttatgg 27670775  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgacta 155  Q
    |||||||||| ||||||||||| || ||||| ||||| | ||||||||||||    
T  27670774 gaaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgacta 27670723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 32187738 - 32187868
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || ||||| ||||| | |||||||||| |||||||  |||||||||||||||| |||||||||| |||||    
T  32187738 tttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgaccaagaacaggtaacaatgacccaaaacagaaggatgagagtta 32187837  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
       ||| |||||||| |||  ||||||||||||    
T  32187838 --ggaagattaatattgtccctaaaatgactat 32187868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 39447447 - 39447317
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||| || |||||||  ||||||||||| ||  |||| ||| | | ||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  39447447 tttctagggaagtttcagagcaatccgatcaagcagtcggaagacccgatttttgactaagaacatgtaacaatgacccaaaatagaaggatgagagtta 39447348  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
       ||| |||||||| |||||||||||||||||    
T  39447347 --ggaagattaatattgtctttaaaatgactat 39447317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 19109884 - 19109983
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||  |||||||| ||||||||||| || |||||  ||||  ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  19109884 tttctggtgaagtttcggagcaatccgatcaagtagtccaaaaactggatttttgactaagaacagctaacaatgacccaaaataaaaggatgagagtta 19109983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 15994895 - 15995112
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtc-ttgatctttgannnnnnngtgagtttctg 102  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||| || || |  |||| ||||  |||          ||| ||| ||    
T  15994895 atgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtccattctatgagagtccttgaatttt-------ttctgattttatg 15994987  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaa 202  Q
    || |||||||| ||||||||||| || |||||||||||||  |||||| ||||||||||  |||||||||||||||| |||| ||||| ||||| || ||    
T  15994988 gggaagtttcggagcaatccgatcaaatagtctgaaaatccaattttttactaagaacatgtaacaatgacccaaaacagaatgatgagagtta-ga-aa 15995085  T
Q  203 tattaatatggtctttaaaatgactat 229  Q
     |||||||| |||  ||||||||||||    
T  15995086 gattaatattgtccataaaatgactat 15995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 25217550 - 25217725
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgg 103  Q
    |||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| || || |||| || || ||||        ||| ||||| |    
T  25217550 atgggtctaaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaattttttctgattttctag 25217649  T
Q  104 gaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaa 179  Q
      |||| ||| ||||||||||| || ||| | ||||| | ||||||| ||||||||||  ||||||||||||||||    
T  25217650 agaagtgtcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacaggtaacaatgacccaaaa 25217725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 41203055 - 41203185
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||| |||||||| ||||||||||| || | | | |||||||  |||||| ||||||||||  |||||||||||||||| ||||||||||||||||    
T  41203055 tttctggggaagtttcggagcaatccgatcaagttgcccgaaaatccaatttttaactaagaacaggtaacaatgacccaaaacagaaggatgaaagtta 41203154  T
Q  197 tgagaatattaatatggtctttaaaatgactat 229  Q
       ||| |||||||| |||  ||||||||||||    
T  41203155 --ggaagattaatattgtccataaaatgactat 41203185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 41854679 - 41854872
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttg-annnnnnngtgagtttctg 102  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| |||||||| |||| ||| |  ||| ||||| ||| |        ||| ||||||    
T  41854679 atgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagttccttctaatggtgtcatgatccttgaatttttttctgattttctg 41854778  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    || |||||||  ||||||||||| || ||| |  |||||| | ||||| ||||||||||  |||||||||| ||||| |||||||||| |||||    
T  41854779 gggaagtttcagagcaatccgatcaagtagcccaaaaatccggtttttaactaagaacagataacaatgactcaaaacagaaggatgagagtta 41854872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 5507791 - 5507574
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng-tgagtttctgggaaagt 109  Q
    ||||||||||||||||| ||||||||||| ||||| || ||||||||  ||| || || |||| ||||| ||||         ||| |||||||| ||||    
T  5507791 taaacgatggaattttggattttgaggggcggagttccataagaagtttcttctatgggagtcatgatccttgaatttttttctgattttctggggaagt 5507692  T
Q  110 ttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    |||| ||||||||||| || | | | ||||| | ||||||||||||||||||  || ||||||||||||| ||||| |||| |||  || ||| ||||||    
T  5507691 ttcggagcaatccgatcaagttgcccgaaaacctgatttttgactaagaacaggtagcaatgacccaaaacagaagaatgagagt--tgtgaagattaat 5507594  T
Q  210 atggtctttaaaatgactat 229  Q
    || || | ||||||||||||    
T  5507593 attgtttataaaatgactat 5507574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 33440293 - 33440472
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||| ||  | |||||||||| ||          ||| |||||||| |||||    
T  33440293 taaacgatggaattttgaattttgagaggcggagtcccgtaagaagtcccttttataggagtcttgatccttaggcctttcctgattttctggggaagtt 33440392  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatga 190  Q
    ||| ||||| | | | || |||||||| || || |||||| || | |||||   ||||||||||||||| ||||||||||    
T  33440393 tcggagcaacctggtcaagtagtctgataaccgtattttttaccatgaacagtgaacaatgacccaaaacagaaggatga 33440472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 16750300 - 16750397
Alignment:
Q  99 tctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| ||||||||   ||||||||| || ||||| ||||||| ||||||| ||||||||||  |||||||||||||||| |||||||||| |||||    
T  16750300 tctggggaagtttcggtacaatccgatcaagtagtccgaaaatccgattttttactaagaacagataacaatgacccaaaacagaaggatgagagtta 16750397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 36875266 - 36875171
Alignment:
Q  101 tgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||| ||| |||| |||||| ||||||| ||||||||||| | |||||||| ||||||||   |||||||||||||||| |||||||||| |||||    
T  36875266 tggggaagattcggagcaattcgattaagtagtctgaaaacccgatttttgcctaagaacgggtaacaatgacccaaaacagaaggatgagagtta 36875171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 17133103 - 17133025
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatcttt 82  Q
    |||||| ||||||||| ||||||| ||||||||||  |||||||||||| ||||| ||| ||||| |||||||||||||    
T  17133103 atgggtctaaacgatgaaattttggattttgagggtcggagtcccgtaaaaagtctcttctaagggagtcttgatcttt 17133025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 32187660 - 32187714
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  32187660 atgggtctaaacgatggaattttggattttgaggggtggagtcccgtaagaagtc 32187714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 44465516 - 44465574
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  44465516 atgggtctaaaagatggaattttggattttgaggggcggagtcccgtaagaagtccctt 44465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 9847292 - 9847364
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| |||||||||||| |||||||||| || |||||||||||||||| ||| ||||||||||||||||    
T  9847292 gggtgtaaatgatggaattttggattttgagggcag-agtcccgtaagaagtctcttctaaggaagtcttgatc 9847364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 17474574 - 17474627
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagt 57  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17474574 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagt 17474627  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 45294004 - 45293826
Alignment:
Q  7 ggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaa 106  Q
    ||||||||||||| ||||||| ||||||||||| | |||||   |||||||||||| || || ||||||||||  |||            ||| ||||||    
T  45294004 ggtttaaacgatgaaattttggattttgaggggtgaagtccaacaagaagtcccttctaggggagtcttgatccctgat-----------tttatgggaa 45293916  T
Q  107 agtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||  ||||||  ||| || ||| | ||||| |||||||||||||||||||||||| |||||||| |||| |||| ||||| |||||    
T  45293915 agtttcagagcaatatgatcaagtagcccgaaaaccggatttttgactaagaacaactagcaatgacctaaaacagaaagatgagagtta 45293826  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 39447528 - 39447477
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  39447528 taaacgatgtaattttggattttgaggggcggagtcccgtaagaagtccctt 39447477  T

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Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 45153708 - 45153790
Alignment:
Q  145 atttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgactat 229  Q
    ||||| |||||||||||  |||||||||||||||| |||||||||| |||||  |||| |||||||| |||  ||||||||||||    
T  45153708 attttggactaagaacaggtaacaatgacccaaaacagaaggatgagagtta--agaagattaatattgtccctaaaatgactat 45153790  T

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Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 13704689 - 13704781
Alignment:
Q  105 aaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaa-ggatgaaagtta 196  Q
    ||||||||  ||||||| ||| || ||| | ||||||||||||||||||| | ||||||||||||| ||| |||| |||| ||||||||||||    
T  13704689 aaagtttcagagcaatctgatcaagtagcccgaaaatcggatttttgactgaaaacaactaacaataacctaaaacagaagggatgaaagtta 13704781  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 11457323 - 11457272
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    |||||||||||||||| |||||||||||  |||||| |||||||||||||||    
T  11457323 taaacgatggaattttaaattttgagggacggagtctcgtaagaagtccctt 11457272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 27900392 - 27900443
Alignment:
Q  7 ggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||| |||||    
T  27900392 ggtttaaacgatggaattttggattatgaggggaggagtctcgtaaaaagtc 27900443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 16750220 - 16750274
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtc 58  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| ||| ||||||    
T  16750220 atgggtctaaacgatggaattttggattttgaggggcggagtcctgtaggaagtc 16750274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 37773735 - 37773784
Alignment:
Q  147 ttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||||||||||||||||||||||| | |||| |||||||||| |||||    
T  37773735 ttttgactaagaacaactaacaatgaactaaaacagaaggatgagagtta 37773784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 44465643 - 44465725
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaatatggtctttaaaatgacta 228  Q
    |||||||||||||||| |  |||||||||||||||| |||||||||| |||||   ||| |||||||| |||  |||||||||||    
T  44465643 gatttttgactaagaagaggtaacaatgacccaaaacagaaggatgagagtta--ggaagattaatattgtccctaaaatgacta 44465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 26228304 - 26228252
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    ||||||||||||||||||||||||||| ||| |||| | |||||||| |||||    
T  26228304 gatttttgactaagaacaactaacaattacctaaaacaaaaggatgagagtta 26228252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 9847084 - 9847156
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| ||||| |||||| |||||||| |  |||||||||||||||||| ||| ||||| ||||||||||    
T  9847084 gggtctaaatgatgggattttggattttgagagc-ggagtcccgtaagaagtctcttctaagggagtcttgatc 9847156  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 8388889 - 8388837
Alignment:
Q  144 gatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    |||||| ||||||||||| | |||||||||||||||  ||||||||| |||||    
T  8388889 gattttagactaagaacagccaacaatgacccaaaactgaaggatgagagtta 8388837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 24477054 - 24477102
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcc 59  Q
    ||||||||| | ||||| ||||||||||| | |||||||||||||||||    
T  24477054 taaacgatgaagttttggattttgaggggtgaagtcccgtaagaagtcc 24477102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 25715831 - 25715764
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||||||||||| ||||||| ||| |||||||| |||||| || ||| ||||| ||||||||||    
T  25715831 taaatgatggaattttggattttga-gggcggagtcccataagaaatctcttctaagggagtcttgatc 25715764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 34817460 - 34817404
Alignment:
Q  28 aattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttga 84  Q
    |||||||||||   |||||||||| |||||||||||||| | |||||||||| ||||    
T  34817460 aattttgagggacagagtcccgtaggaagtcccttataaaggagtcttgatccttga 34817404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 140857 - 140640
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnng-tgagtttctgggaaagt 109  Q
    ||||||||| || |||| ||||||||||| | |||||||||||||||||||| || || |||| || || ||||         ||| |||||||| ||||    
T  140857 taaacgatgaaactttggattttgaggggcgaagtcccgtaagaagtcccttttatgggagtcatggtccttgaatttttttctgattttctggggaagt 140758  T
Q  110 ttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaat 209  Q
    |||| ||||||||||| || ||||||||||| | ||||||||||||||||||| ||||||||||| |||| | |||||||| |||||   ||| ||||||    
T  140757 ttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacctaaaacaaaaggatgagagtta--ggaagattaat 140660  T
Q  210 atggtctttaaaatgactat 229  Q
    || |||  ||||||||||||    
T  140659 attgtccctaaaatgactat 140640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 4742 - 4526
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatctttgannnnnnngtgagtttctgggaaagtt 110  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||||||||| | ||||||||| | || || |        ||| |||||||  |||||    
T  4742 taaacgatgtaattttggattttgaggggtggagtcccgtaagaagtcccttttgaggaagtctcgttcctttatttttttatgattttctggccaagtt 4643  T
Q  111 tcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagttatgagaatattaata 210  Q
    ||| ||||||||||| || |||    |||| || ||||| ||||| ||||||||||||||||||  ||| | || |||||  ||||  |||| |||||||    
T  4642 tcggagcaatccgatcaaatagctcaaaaaccgtattttggactaggaacaactaacaatgacctcaaacataatgatgatggtta--agaagattaata 4545  T
Q  211 tggtctttaaaatgactat 229  Q
    |||||||||||||||||||    
T  4544 tggtctttaaaatgactat 4526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 3174 - 3368
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgat-ctttgannnnnnngtgagtttctg 102  Q
    |||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||||||| |||||  ||| || | |||  |        ||| ||||||    
T  3174 atgggtctaaacgatggaattttggattttgaggggtggggtcccataagaagtcccttctaagggggtcatggtccttaaatttttttctgattttctg 3273  T
Q  103 ggaaagtttcgtagcaatccgattaactagtctgaaaatcgga-tttttgactaagaacaactaacaatgacccaaaatagaaggatgaaagtta 196  Q
    || |||||||  ||||||| ||| || ||| | ||||| | || ||||| ||||||||||| |||||||||||||||| |||||||||| |||||    
T  3274 gggaagtttcagagcaatctgatcaagtagcccgaaaacctgatttttttactaagaacaagtaacaatgacccaaaacagaaggatgagagtta 3368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 141838 - 141919
Alignment:
Q  97 tttctgggaaagtttcgtagcaatccgattaactagtctgaaaatcggatttttgactaagaacaactaacaatgacccaaa 178  Q
    |||||||| |||||||| ||||||||||| || ||||||||||| | ||||||||||||||||||   ||||||||||||||    
T  141838 tttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgcaacaatgacccaaa 141919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 141776 - 141826
Alignment:
Q  5 tgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaa 55  Q
    ||||| ||||||||||||||||| |||||||||||  ||||||| ||||||    
T  141776 tgggtctaaacgatggaattttggattttgaggggcagagtcccataagaa 141826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 174149 - 174200
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtccctt 62  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  174149 taaacgatggaattttgaattttgaggggcggagtctcgtaagaagtccctt 174200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23351 - 23299
Alignment:
Q  4 atgggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaag 56  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  23351 atgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaag 23299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 205687 - 205754
Alignment:
Q  11 taaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtcttgatc 79  Q
    |||| |||| ||||||| ||||||||||  |||||||||||||||||| ||| ||||| ||||||||||    
T  205687 taaatgatgaaattttggattttgagggt-ggagtcccgtaagaagtctcttctaagggagtcttgatc 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 205893 - 205945
Alignment:
Q  6 gggtttaaacgatggaattttgaattttgaggggaggagtcccgtaagaagtcc 59  Q
    |||| |||| |||||||||||| ||||||| ||| |||||||||||||||||||    
T  205893 gggtctaaatgatggaattttggattttga-gggcggagtcccgtaagaagtcc 205945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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