View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3374_low_1 (Length: 702)
Name: NF3374_low_1
Description: NF3374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3374_low_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 685; Significance: 0; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 685; E-Value: 0
Query Start/End: Original strand, 1 - 693
Target Start/End: Original strand, 4369826 - 4370518
Alignment:
| Q |
1 |
ttcctcggatgtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagtaaagtatgatgtttcactttgatacatgcccacttttaaa |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4369826 |
ttcctcggaagtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagtaaagtatgatgtttcactttgatacatgcccacttttaaa |
4369925 |
T |
 |
| Q |
101 |
atatcttttccttttgtgaaatgccgcattagagacttgacagaagggcttatataaataaaggctataagatcttgacatttcttagttatctctgagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4369926 |
atatcttttccttttgtgaaatgccgcattagagacttgacagaagggcttacataaataaaggctataagatcttgacatttcttagttatctctgagt |
4370025 |
T |
 |
| Q |
201 |
gaataggtatattcgtctcacagtctgccaaaatcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4370026 |
gaataggtatattcgtctcacagtctgccaaaatcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctc |
4370125 |
T |
 |
| Q |
301 |
accaacagctctgcagaatggtgtattgtccgtcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttg |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4370126 |
accaacagctctgcagaatggtgtattgtccgtcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttg |
4370225 |
T |
 |
| Q |
401 |
tcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaatgttccgtttggactgttcactaacaagtttattatggtcctactctctgcgt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4370226 |
tcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaatgttccgtttggactgttcactaacaagtttattatggtcctactctctgcgt |
4370325 |
T |
 |
| Q |
501 |
caaccgatccatcaaccattatggtgcaacctgttaccttccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaata |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4370326 |
caaccgatccatcaaccattatggtgcaacctgttaccttccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaata |
4370425 |
T |
 |
| Q |
601 |
tttccctctaatctcatcataagacggtggcttaaatccttcgccttgtcttgaaaccaaatcaaacatagttttaaattcatcactctgtgc |
693 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4370426 |
tttccctctaatctcatcataagacggtggcttaaatccttcgccttgtcttgaaaccaaatcaaacatagttttaaattcatcactctgtgc |
4370518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 1 - 689
Target Start/End: Original strand, 4365426 - 4366120
Alignment:
| Q |
1 |
ttcctcggatgtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagtaaagtatgatgtttcactttgatacatgcccacttttaaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| |
|
|
| T |
4365426 |
ttcctcggatgtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagtatagtatgatgtttgccattgatacatgcccaattttaaa |
4365525 |
T |
 |
| Q |
101 |
atatcttttccttttgtgaaatgccgcattagagacttgacagaagggcttatataaataaaggctataagatcttgacatttcttagttatctctgagt |
200 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||||||||||||| ||| ||| |||||||| ||||||| ||||| |||||| |||||||||||| |
|
|
| T |
4365526 |
atatcttttccttttgtgaagtgccacaatagagacttgacagaaggccttgtatgaataaaggttataagactctgacacttcttaattatctctgagt |
4365625 |
T |
 |
| Q |
201 |
gaataggtatattcgtctcacagtctgccaaaatcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctc |
300 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||| || ||||||||| |||||||||||||||||||||||||||||| |||||| |||||| |||| |
|
|
| T |
4365626 |
gaataggtatattctcctcacagtcttccaatatcgtcagaatgcaatctgttgcacaaggggtccaatacagcctagtccttttcgccatcagcatcat |
4365725 |
T |
 |
| Q |
301 |
accaacagctctgcagaatggtgtattgtccgtcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttg |
400 |
Q |
| |
|
| | | ||| | || || ||||| ||||||||||| |||||| |||||||||| |||||||||||||||| || |||| ||| ||||||||| |
|
|
| T |
4365726 |
agcggctgctgcgtagtattctgtatattccgtcacaatgtggacagcattttcttccccaacctcttcaacaacgtcatccatcatcttaaagagtttc |
4365825 |
T |
 |
| Q |
401 |
tcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaatgttccgtttggactgttcactaacaagtttattatggtcctactctctg--- |
497 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
4365826 |
tcaggcgattccaacatatcagacgcatcaatagacttcaaaaagaatgttccctttggactgttcactaaccagtttagtatggtcctactctccgtgt |
4365925 |
T |
 |
| Q |
498 |
---cgtcaaccgatccatcaaccattatggtgcaacctgttaccttccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgt |
594 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4365926 |
cactgtcagccgatccatcaaccattatggtgcaacctgttactttccatatagctctatgttcctccaaagcttcatttgtcaacttaacttcatccgt |
4366025 |
T |
 |
| Q |
595 |
caaatatttccctctaatctcatcataagacggtggcttaaatccttcgccttgtcttgaaaccaaatcaaacatagttttaaattcatcactct |
689 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4366026 |
caaatatttccctctaatctcatcataagacggtggattaaatcctacgccttgtcttgaaaccaaatcaaacatagttttaaattcatcactct |
4366120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 241 - 687
Target Start/End: Original strand, 4360270 - 4360716
Alignment:
| Q |
241 |
aatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctcaccaacagctctgcagaatggtgtattgtccgtcacaatt |
340 |
Q |
| |
|
|||||||| |||||| ||||| ||||||||||||||||| |||||| ||||||||||| || | ||||| || ||||||||| ||||| |||| |
|
|
| T |
4360270 |
aatgcaatgtgttgcgcaaggtgtccaatacagcctagtccttttcgccatcaacatcccagcggcagctacatagtatggtgtatattccgttacaacg |
4360369 |
T |
 |
| Q |
341 |
tggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttgtcaggcgattccaacatatcagttgcatcaatagacttca |
440 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| || |||| || ||||||||| |||| ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
4360370 |
tggacaacattttcttccccaacctcttcaacaacgtcatccatcattttaaagagtttctcagacgattccaacatatcagacgcatcaatagtcttca |
4360469 |
T |
 |
| Q |
441 |
aaaagaatgttccgtttggactgttcactaacaagtttattatggtcctactctctgcgtcaaccgatccatcaaccattatggtgcaacctgttacctt |
540 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||| |||| |||| | || | || |||| ||||||||| |||||||||| | ||| |
|
|
| T |
4360470 |
aaaagaatgttccctttggactgttcagtaacaagtttagtatgttcctcttgggaaagttagtaaatacatcgaccattatgctgcaacctgtgatctt |
4360569 |
T |
 |
| Q |
541 |
ccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaatatttccctctaatctcatcataagacggtggcttaaatcct |
640 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||| ||| |||| |||||||||| || ||| ||| | |||||||||||||||| |
|
|
| T |
4360570 |
ccacatagctctatgttcttccaaaacttcattcgtcaacttaatttcttccggaaaatatttccatccaatatcaaagaaccccggtggcttaaatcct |
4360669 |
T |
 |
| Q |
641 |
tcgccttgtcttgaaaccaaatcaaacatagttttaaattcatcact |
687 |
Q |
| |
|
|||| |||||||||||||||||| |||| || |||||||||||||| |
|
|
| T |
4360670 |
acgccatgtcttgaaaccaaatcacacattgtcttaaattcatcact |
4360716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 233 - 689
Target Start/End: Complemental strand, 5725643 - 5725187
Alignment:
| Q |
233 |
atcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctcaccaacagctctgcagaatggtgtattgtccg |
332 |
Q |
| |
|
||||||| |||||| |||||||||||| |||||||||| |||||| ||||||| |||||||||||||||| | | || ||| || | |||||| |
|
|
| T |
5725643 |
atcatctcaatgcaccgtgttgcacaaggtgtccaatacaacctagtccttttcttcatcaacatctcaccagccttttcatagtatgttgcactgtccg |
5725544 |
T |
 |
| Q |
333 |
tcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttgtcaggcgattccaac--atatcagttgcatca |
430 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||| ||| |||| ||||| || || ||||||| || ||| |
|
|
| T |
5725543 |
tcacaatttggacaacattttcttccccaacttcttcaacaatgtcatccatcatcttaaatagttcttcaggtga-----acttatatcagctgattca |
5725449 |
T |
 |
| Q |
431 |
atagacttcaaaaagaatgttccgtttggactgttcactaacaagtttattatggtccta--ctc--tctgcgtcaaccgatccatcaaccattatggtg |
526 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||| || || ||||||| |||| |||| ||| ||| | ||| | | |||| |||||||||||| |
|
|
| T |
5725448 |
acagacttcaaaaagaatgttccctttggactgtttacgaagaagtttagtatgtccctaaactccttct-catcataccagtcatcgaccattatggtg |
5725350 |
T |
 |
| Q |
527 |
caacctgttaccttccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaatatttccctctaatctcatcataagacg |
626 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
5725349 |
caacctgttatcttccacacagctctatgttctgccaaagcttccattgtaaactcaacttcatccgtcaaatatttccctttaatctcatcgaaagacg |
5725250 |
T |
 |
| Q |
627 |
gtggcttaaatccttcgccttgtcttgaaaccaaatcaaacatagttttaaattcatcactct |
689 |
Q |
| |
|
|||||||||| ||| | || ||| ||||||||| |||| ||||||| ||||||||||||||| |
|
|
| T |
5725249 |
gtggcttaaaccctacaccatgttttgaaaccatatcacacatagtaataaattcatcactct |
5725187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 250 - 689
Target Start/End: Complemental strand, 4414640 - 4414209
Alignment:
| Q |
250 |
tgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctcaccaacagctctgcagaatggtgtattgtccgtcacaatttggacaaca |
349 |
Q |
| |
|
|||||||||||| |||||||||| |||||| |||||| ||||| ||||||||||| || || || || | | ||||||||| |||||||||||||||||| |
|
|
| T |
4414640 |
tgttgcacaaggtgtccaatacaacctagtccttttcaccatctacatctcaccagcaactttgtagtaggttgtattgtctgtcacaatttggacaaca |
4414541 |
T |
 |
| Q |
350 |
ttttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttgtcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaatg |
449 |
Q |
| |
|
|||||||| ||||||||||| ||||| | |||| ||| ||||||||||| ||| ||||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
4414540 |
ttttcttc-ccaacctcttctacaatttcatccatcatcttaaagagtttgttaggtgattccaacatattcgacgcatcaacggacttcaaaaagaatg |
4414442 |
T |
 |
| Q |
450 |
ttccgtttggactgttcactaacaagtttattatggtcctactctctgcgtcaaccgatccatcaaccattatggtgcaacctgttaccttccacatagc |
549 |
Q |
| |
|
||| | | | |||||||| | |||| |||| |||| ||| || ||| | |||||||||||||||| ||| | ||| ||||| ||||| |
|
|
| T |
4414441 |
ttc--tcctggttattcactaagatatttagtatgttcctcttctttgggtcggtccatccatcaaccattatagtgtaccct------ttccatatagc |
4414350 |
T |
 |
| Q |
550 |
tctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaatatttccc-tctaatctcatcataagacggtggcttaaatccttcgccttg |
648 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| |||| |||||||||||| | ||| |||||| |||| |||||| ||||||| || || |
|
|
| T |
4414349 |
tctatgttctaccaaagcttcctttgtcaacttaacttcttccgccaaatatttcccttttaaggtcatcaaaagaaggtggcacaaatcctaacccatg |
4414250 |
T |
 |
| Q |
649 |
tcttgaaaccaaatcaaacatagttttaaattcatcactct |
689 |
Q |
| |
|
|||||||||||| | | ||||||| |||| |||||||||| |
|
|
| T |
4414249 |
tcttgaaaccaactgacacatagtaataaactcatcactct |
4414209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 255 - 447
Target Start/End: Original strand, 4389919 - 4390111
Alignment:
| Q |
255 |
cacaaggggtccaatacagcctagttcttttctccatcaacatctcaccaacagctctgcagaatggtgtattgtccgtcacaatttggacaacattttc |
354 |
Q |
| |
|
||||||| |||||||||| |||||| || ||||||||||||||||||||| |||||||| | ||| ||||| |||||||||| ||| ||||||||||| |
|
|
| T |
4389919 |
cacaaggtgtccaatacaacctagtcctcttctccatcaacatctcaccagcagctctgaaatatgccgtattatccgtcacaacttgaacaacattttc |
4390018 |
T |
 |
| Q |
355 |
ttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttgtcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaa |
447 |
Q |
| |
|
||| |||||||||||||||| | |||| ||| ||| | ||| |||| ||||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
4390019 |
ttcaccaacctcttcaacaacatcatccatcatcttaaacaatttctcagacgattccaacatatcggacgcatcaaccgacttcaaaaagaa |
4390111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 450
Target Start/End: Original strand, 4377209 - 4377431
Alignment:
| Q |
228 |
ccaaaatcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatctcaccaacagctctgcagaatggtgtatt |
327 |
Q |
| |
|
|||| ||||||| |||||| | ||| |||||||| |||||||||| |||||| || ||||||||||||||||||||| ||||| || | | | ||||| |
|
|
| T |
4377209 |
ccaacatcatctcaatgcagtgtgtcgcacaaggtgtccaatacaacctagtcctcttctccatcaacatctcaccagcagctttgaaataagtcgtatt |
4377308 |
T |
 |
| Q |
328 |
gtccgtcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagtttgtcaggcgattccaacatatcagttgca |
427 |
Q |
| |
|
||||| |||| ||| |||||||||||||| |||||||||||||||| | |||| ||| ||| | ||| ||||||||||||| |||||| | ||| |
|
|
| T |
4377309 |
atccgttacaacttgaacaacattttcttccccaacctcttcaacaacatcatccatcatcttaaacaatttctcaggcgattccatcatatctgacgca |
4377408 |
T |
 |
| Q |
428 |
tcaatagacttcaaaaagaatgt |
450 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
4377409 |
tcaaccgacttcaaaaagaatgt |
4377431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 200 - 624
Target Start/End: Original strand, 4384754 - 4385178
Alignment:
| Q |
200 |
tgaataggtatattcgtctcacagtctgccaaaatcatctgaatgcaatttgttgcacaaggggtccaatacagcctagttcttttctccatcaacatct |
299 |
Q |
| |
|
|||| |||||| ||| ||||| | ||| |||| ||| ||| |||||| | ||| |||||||| |||||||||| |||||| || |||||||||||||||| |
|
|
| T |
4384754 |
tgaacaggtatcttcttctcataatcttccaacatcctctcaatgcagtgtgtcgcacaaggtgtccaatacaacctagtcctcttctccatcaacatct |
4384853 |
T |
 |
| Q |
300 |
caccaacagctctgcagaatggtgtattgtccgtcacaatttggacaacattttcttctccaacctcttcaacaatgttgtccaaaatccgaaagagttt |
399 |
Q |
| |
|
||||| ||||| || | | | ||||| ||||| |||| ||| |||||||||||||| |||||||||||||||| | |||| ||| ||| | ||| |
|
|
| T |
4384854 |
caccagcagctttgaaataagccgtattatccgtgacaacttgaacaacattttcttccccaacctcttcaacaacatcatccatcatcttaaacaattt |
4384953 |
T |
 |
| Q |
400 |
gtcaggcgattccaacatatcagttgcatcaatagacttcaaaaagaatgttccgtttggactgttcactaacaagtttattatggtcctactctctgcg |
499 |
Q |
| |
|
|||| ||||||||||||||| | ||||||| ||||| |||||||| || || || ||| ||||| |||||||| | ||| |||| ||| | |
|
|
| T |
4384954 |
ctcagacgattccaacatatctgacgcatcaaccgactttaaaaagaacgtcccattcacactattcaccaacaagttcaatatactcctcttcttcttg |
4385053 |
T |
 |
| Q |
500 |
tcaaccgatccatcaaccattatggtgcaacctgttaccttccacatagctctatgttcttccaaagcttcatttgtcaacttaacttcatccgtcaaat |
599 |
Q |
| |
|
||| | ||||||||||||||| || || ||| |||||| | ||||||| ||||||||||||| ||| |||||||||||| ||| |||||| |
|
|
| T |
4385054 |
tcagtccatccatcaaccattacacaacaccccgttttcttccattgaactctatgatcttccaaagctttattcaccaacttaacttcttccctcaaat |
4385153 |
T |
 |
| Q |
600 |
atttccctctaatctcatcataaga |
624 |
Q |
| |
|
| |||||||||||||||||| |||| |
|
|
| T |
4385154 |
acttccctctaatctcatcaaaaga |
4385178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 627
Target Start/End: Original strand, 4390224 - 4390294
Alignment:
| Q |
557 |
tcttccaaagcttcatttgtcaacttaacttcatccgtcaaatatttccctctaatctcatcataagacgg |
627 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| ||||||| |||||| ||||||||||| ||||||| |
|
|
| T |
4390224 |
tcttccaaagcttcattcaccaacttaacttcttccctcaaatacttccctttaatctcatcaaaagacgg |
4390294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4360034 - 4360099
Alignment:
| Q |
2 |
tcctcggatgtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagtaaagtat |
67 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||| |
|
|
| T |
4360034 |
tccttggatttgaacattcttctcaaagctcctttgttctcatgaagacaacataaagttaagtat |
4360099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 4414886 - 4414828
Alignment:
| Q |
2 |
tcctcggatgtgaacattcttaccaaagctcctttgttctcgtgaatacaacataaagt |
60 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
4414886 |
tccttggatgtgaacattcttctcaaagctccttcgttctcatgaatacaacctaaagt |
4414828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 4377544 - 4377611
Alignment:
| Q |
560 |
tccaaagcttcatttgtcaacttaacttcatccgtcaaatatttccctctaatctcatcataagacgg |
627 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||| ||||||| |||||| ||||||||||| ||||||| |
|
|
| T |
4377544 |
tccaaagctttattgaccaacttaacttcttccctcaaatacttccctttaatctcatcaaaagacgg |
4377611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 15658753 - 15658720
Alignment:
| Q |
341 |
tggacaacattttcttctccaacctcttcaacaa |
374 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |
|
|
| T |
15658753 |
tggacaacattttcttctccaatctcttcaacaa |
15658720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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