View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3375_low_24 (Length: 267)
Name: NF3375_low_24
Description: NF3375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3375_low_24 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 44)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 26143727 - 26143511
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26143727 |
attatgacttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
26143628 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26143627 |
atgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttcttctattcgggactgtaatccaacag |
26143528 |
T |
|
| Q |
219 |
ggtatttggctacattt |
235 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
26143527 |
ggtatttggctacattt |
26143511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 25483918 - 25483706
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25483918 |
attatgacttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaagaaaattaaaaactgcttttgcaagtgttgatttaccc |
25483819 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25483818 |
atgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
25483719 |
T |
|
| Q |
219 |
ggtatttggctac |
231 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25483718 |
ggtatttggctac |
25483706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 25539402 - 25539188
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25539402 |
attatgacttgaattctctctgacattatgaagaaaacatacaacttcaaattgatcagcaacaaaattaaaaactgcttttgcaagtgttgatttaccc |
25539303 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25539302 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgttctattggggactgtaatccaacag |
25539203 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
25539202 |
ggtatttggccacat |
25539188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 25580573 - 25580369
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25580573 |
ttgaaatctctctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
25580474 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
226 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25580473 |
agtaccataaagtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
25580374 |
T |
|
| Q |
227 |
gctac |
231 |
Q |
| |
|
||||| |
|
|
| T |
25580373 |
gctac |
25580369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 26056773 - 26056569
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056773 |
ttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctcc |
26056674 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
226 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26056673 |
ggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttg |
26056574 |
T |
|
| Q |
227 |
gctac |
231 |
Q |
| |
|
||||| |
|
|
| T |
26056573 |
gctac |
26056569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 26076743 - 26076539
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26076743 |
ttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctcc |
26076644 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
226 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26076643 |
ggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgcaatccaacagggtatttg |
26076544 |
T |
|
| Q |
227 |
gctac |
231 |
Q |
| |
|
||||| |
|
|
| T |
26076543 |
gctac |
26076539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 26862439 - 26862227
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| ||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
26862439 |
attatgagttgaattctctctaactttatgaagaaaacatacaccttcaaattgatcggcaacaaaattataaattgcttttgcaagtgttgatttcccc |
26862340 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| | || ||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
26862339 |
atgcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaatttcacttgttctactcgggactttaatccaacag |
26862240 |
T |
|
| Q |
219 |
ggtatttggctac |
231 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26862239 |
ggtatttggctac |
26862227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 26656824 - 26656610
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
26656824 |
attatgagctgaattctctctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttaccc |
26656725 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||| ||| ||| | |||||||||||||||||||||| || ||| |||| ||||||||||| |
|
|
| T |
26656724 |
atgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacag |
26656625 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
26656624 |
ggtatttggcaacat |
26656610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 26762795 - 26762581
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
26762795 |
attatgagctgaattctctctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaattataaattgctttggcaagtgttgatttaccc |
26762696 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||| ||| ||| | |||||||||||||||||||||| || ||| |||| ||||||||||| |
|
|
| T |
26762695 |
atgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaatttcacttgttgtactcgagactctaatccaacag |
26762596 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
26762595 |
ggtatttggcaacat |
26762581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 26647338 - 26647124
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
26647338 |
attatgagctgaattctctctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttaccc |
26647239 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| | || ||||| | | ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
26647238 |
aaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacag |
26647139 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26647138 |
ggtatttggctacat |
26647124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 26753306 - 26753092
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
26753306 |
attatgagctgaattctctctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaattataaatcgctttggcaagtgttgatttaccc |
26753207 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| | || ||||| | | ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
26753206 |
aaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacag |
26753107 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26753106 |
ggtatttggctacat |
26753092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 26884929 - 26884715
Alignment:
| Q |
19 |
attatgacttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26884929 |
attatgagttgaattctccctgactttatgcagaaaacatacacattcaaattgatcagcaacataattataaattgcttttgcaagtgttgatttaccc |
26884830 |
T |
|
| Q |
119 |
atgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacag |
218 |
Q |
| |
|
| ||||||||||||||||| |||||||||| | ||| | || | ||| || | |||||||||||||| | ||||| || |||| ||||||||||||||| |
|
|
| T |
26884829 |
aagcctccagtaccataaattcctaccatgtgtaccccttcgttagattccttatcaagaagcaattttaattgttgtactcggtactgtaatccaacag |
26884730 |
T |
|
| Q |
219 |
ggtatttggctacat |
233 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26884729 |
ggtatttggctacat |
26884715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 228
Target Start/End: Original strand, 27337427 - 27337627
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||| | |
|
|
| T |
27337427 |
tgaattctctctaacattatgaagaaagcatactccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctcta |
27337526 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| | || ||||| || |||||||||||||| ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
27337527 |
gtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttgg |
27337626 |
T |
|
| Q |
228 |
c |
228 |
Q |
| |
|
| |
|
|
| T |
27337627 |
c |
27337627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 28 - 228
Target Start/End: Original strand, 27398167 - 27398367
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||| | |
|
|
| T |
27398167 |
tgaattctctctaacattatgaagaaagcatactccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgattttcccaagcctcta |
27398266 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| | || ||||| || |||||||||||||| ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
27398267 |
gtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaattttacttgttgtactcgggactgtaatccaacagggtatttgg |
27398366 |
T |
|
| Q |
228 |
c |
228 |
Q |
| |
|
| |
|
|
| T |
27398367 |
c |
27398367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 28787088 - 28786883
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
28787088 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctcca |
28786989 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| || ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |||| |
|
|
| T |
28786988 |
gtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg |
28786889 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
28786888 |
caacat |
28786883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 27717830 - 27718036
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
||||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
27717830 |
ttgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcc |
27717929 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
226 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||||| | ||||||||| |||||||||||| || ||| ||||| |||||||||||||| ||| |
|
|
| T |
27717930 |
agtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattg |
27718029 |
T |
|
| Q |
227 |
gctacat |
233 |
Q |
| |
|
|| |||| |
|
|
| T |
27718030 |
gcaacat |
27718036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 28793209 - 28793004
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||| ||||||| ||||| | |||||||||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
28793209 |
tgaactctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctcca |
28793110 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| || ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |||| |
|
|
| T |
28793109 |
gtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg |
28793010 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
28793009 |
caacat |
28793004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 25492673 - 25492856
Alignment:
| Q |
50 |
agaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc |
149 |
Q |
| |
|
|||||||||| || ||||||||||||||||| || ||||| | || ||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
25492673 |
agaaaacataaaccttcaaattgatcagcaatgaagttatagattgattttgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgt |
25492772 |
T |
|
| Q |
150 |
ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacat |
233 |
Q |
| |
|
||| |||||||||||| || || |||||||||||||| |||| || |||||| ||||||||||||||||||||||| |||| |
|
|
| T |
25492773 |
ggaactcatcctcagatacctcatctagaagcaatttcacgtgttgtactcgggattgtaatccaacagggtatttggcaacat |
25492856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 233
Target Start/End: Complemental strand, 27215266 - 27215097
Alignment:
| Q |
64 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
163 |
Q |
| |
|
|||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||| | |
|
|
| T |
27215266 |
ttcaaactgatcagcaatgaaattaaaaattgcttttgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttcctta |
27215167 |
T |
|
| Q |
164 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacat |
233 |
Q |
| |
|
|| ||| |||||||||||||||| ||||||| |||| ||| |||||||||||||||| |||||| |||| |
|
|
| T |
27215166 |
gatcccttgtcaagaagcaattttacttgttgtatttgggtatgtaatccaacagggtgtttggcaacat |
27215097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 29 - 233
Target Start/End: Original strand, 27530634 - 27530838
Alignment:
| Q |
29 |
gaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccag |
128 |
Q |
| |
|
|||||| |||| ||||| | |||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
27530634 |
gaattcactctcacattttctagaaaacataaaacttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacctatgcctccag |
27530733 |
T |
|
| Q |
129 |
taccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggc |
228 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||| |||||| || |||||| |||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
27530734 |
taccataaagtcctaccatgtggacctcatcatcagatttttcatcaagatgccctttcacatgttgtactcgggactgtaatccaacaggatatttggc |
27530833 |
T |
|
| Q |
229 |
tacat |
233 |
Q |
| |
|
|||| |
|
|
| T |
27530834 |
aacat |
27530838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 25511743 - 25511640
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25511743 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaatagaattaaaaactgcttttgcaagtgttgatttacccatgcctct |
25511644 |
T |
|
| Q |
127 |
agta |
130 |
Q |
| |
|
|||| |
|
|
| T |
25511643 |
agta |
25511640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 27610451 - 27610657
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
||||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
27610451 |
ttgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcc |
27610550 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttg |
226 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||||| | ||||||||| ||||||||| || || | | ||||| |||||||||||||| ||| |
|
|
| T |
27610551 |
agtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttcttgtacttgagactgcaatccaacagggtaattg |
27610650 |
T |
|
| Q |
227 |
gctacat |
233 |
Q |
| |
|
|| |||| |
|
|
| T |
27610651 |
gcaacat |
27610657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 27705736 - 27705930
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| |
|
|
| T |
27705736 |
tgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaaattataaattgctcttgcaagtgttgatttacccaagcctcca |
27705835 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||| ||| ||| ||||| ||||| |||| |||| ||| |||||||| |||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
27705836 |
atgccaaaaattccaaccatatggaccccatcatcaggtccctcatcaagaagtgatttcacttgttgtactcgagactgcaatccaacagggta |
27705930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 28781951 - 28781746
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
28781951 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaattaagttataaactgcttttacaagtgttgatttacccaagcctcca |
28781852 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
|||||||||||||||||||| | ||| ||| ||| | || |||||||| |||||||||||| || |||||||||||||||||||||||| |||| |
|
|
| T |
28781851 |
gtaccataaagtcctaccatcctgactccattatcatatccttcaccaagaagcgatttcacttgttgtactcgggactgtaatccaacagggtaattgg |
28781752 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
28781751 |
caacat |
28781746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 225
Target Start/End: Complemental strand, 26624121 - 26623924
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| || ||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| |
|
|
| T |
26624121 |
tgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctcca |
26624022 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt |
225 |
Q |
| |
|
| ||||| | ||| ||||| ||||| |||| ||||| || | |||||||| |||||||||||| || | | ||||||||||||||||||||||| |
|
|
| T |
26624021 |
atcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtattt |
26623924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 225
Target Start/End: Complemental strand, 26730098 - 26729901
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| || ||||||||||||||||||||| ||||| | |||| |||||||||||||||| |||| ||||||| |
|
|
| T |
26730098 |
tgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaagttatagattgctcttgcaagtgttgatttgcccaagcctcca |
26729999 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt |
225 |
Q |
| |
|
| ||||| | ||| ||||| ||||| |||| ||||| || | |||||||| |||||||||||| || | | ||||||||||||||||||||||| |
|
|
| T |
26729998 |
atcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtattt |
26729901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 27604036 - 27604241
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
27604036 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcca |
27604135 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||| | |||||||| |||||||||||| || ||| ||||| ||||||| ||| || |||| |
|
|
| T |
27604136 |
gtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagagatttcacttgttgtactcgagactgcaatccaataggataattgg |
27604235 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
27604236 |
caacat |
27604241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 26803296 - 26803102
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
26803296 |
tgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgctgatttacccaagcctcca |
26803197 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| |||| ||| ||||||||| ||||||||| || || ||| || || |||||||||||||| |
|
|
| T |
26803196 |
atcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttcttgtactcgagagtgcaatccaacagggta |
26803102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 27426944 - 27427138
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
||||||||||||||| | | ||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| |
|
|
| T |
27426944 |
tgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctcca |
27427043 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| |||| ||| ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
27427044 |
atcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta |
27427138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 26824669 - 26824464
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| || || | ||||||||| | | |||||||| |||||||| | ||||| || |||||||||||||||||||||||| | |||||| |
|
|
| T |
26824669 |
tgaattctctctcacgttctcaagaaaacaaaaaacttcaaatttatcagcaatagaattaaaagttgcttttgcaagtgttgatttacctaaacctcca |
26824570 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
|||| |||||||||||||| ||||| |||| ||||| | | |||||||| |||||||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
26824569 |
ataccgtaaagtcctaccatatggaccacatcatcagattcgttatcaagaagagatttcacttgttgtactcgggactgtaatccaaccgggtatttgg |
26824470 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
26824469 |
caacat |
26824464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 31285409 - 31285204
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| | |||||||||||| ||| ||||||||| | |||| ||||||||||||||||||||| |||||| |
|
|
| T |
31285409 |
tgaattctctctcacatcatgaagaaaacataatccgtcaaattgatcaccaataaaattatagattgctcttgcaagtgttgatttacccaagcctcct |
31285310 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| |||||||||||||||||| | ||| | | | || || | |||||||||||||||||||||| |||||| ||| |||||||||||||| |||| |
|
|
| T |
31285309 |
atcccataaagtcctaccatgtgtacccctttattagtttccttatcaagaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattgg |
31285210 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
31285209 |
caacat |
31285204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 27697918 - 27698123
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
||||||| ||| ||||||||||||||||||| || |||||||||||||||||| |||||||| | |||| |||||||||||||||| |||| ||||||| |
|
|
| T |
27697918 |
tgaattcattctcacattatgaagaaaacataaaccttcaaattgatcagcaaccaaattatagattgctcttgcaagtgttgattttcccaagcctcca |
27698017 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| ||| ||| ||| ||||| ||||| |||| ||||| || | ||||||| |||||||| || || | | |||||||||||||||||||| |||| |
|
|
| T |
27698018 |
atcccaaaaattccaaccatatggaccccatcatcagatccattatcaagaattgatttcactctttgtacttgagactgtaatccaacagggtaattgg |
27698117 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
27698118 |
caacat |
27698123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 27679800 - 27679606
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| || ||| |||||||| |||||||||||||| | | | |||||||||||||||| |||| |||||| |
|
|
| T |
27679800 |
tgaattctctctcacatcatgaagaaaacatgaaccttcgaattgatctgcaacaaaattatagatttgtcttgcaagtgttgatttccccaaacctcca |
27679701 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| || || ||| ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
27679700 |
atgccataaattccaaccatatggaccccatcatcggatccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta |
27679606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 27592389 - 27592560
Alignment:
| Q |
64 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
163 |
Q |
| |
|
||||||||||||||||| ||| ||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| ||||| ||||| ||| ||| |
|
|
| T |
27592389 |
ttcaaattgatcagcaataaagttataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca |
27592488 |
T |
|
| Q |
164 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacattt |
235 |
Q |
| |
|
|| || ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |||| |||||| |
|
|
| T |
27592489 |
gatccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacattt |
27592560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 27676988 - 27677146
Alignment:
| Q |
64 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctca |
163 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||| ||||||| | ||||||| ||| ||||| ||||| ||| ||| |
|
|
| T |
27676988 |
ttcaaattgatcagcaataaaattataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatca |
27677087 |
T |
|
| Q |
164 |
gagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
|| || ||||||||| |||||| ||||| || ||| ||||| |||||||||||||| |
|
|
| T |
27677088 |
gatccttcatcaagaagcgatttcatttgttgtactcgagactgcaatccaacagggta |
27677146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 25511640 - 25511585
Alignment:
| Q |
176 |
agaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctac |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25511640 |
agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctac |
25511585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 28140378 - 28140295
Alignment:
| Q |
35 |
tctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccc |
118 |
Q |
| |
|
||||| ||||||||||||||||| | || |||||||||||| |||| ||||||||||| ||||| ||||||||||| ||||||| |
|
|
| T |
28140378 |
tctctcacattatgaagaaaacacaaacattcaaattgatcggcaataaaattataaattgcttgtgcaagtgttgttttaccc |
28140295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 26937866 - 26937790
Alignment:
| Q |
41 |
acattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacc |
117 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| ||| |||||||||| |||| |||||||||||||||||| |
|
|
| T |
26937866 |
acattatgaagaaaacacaaactttcaaattgatcaccaatcaaattataaattgctcgtgcaagtgttgatttacc |
26937790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 28097775 - 28097857
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg |
110 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| |||| |||||||||| |||||| ||||||||||| |||||||||||||||| |
|
|
| T |
28097775 |
tgaattttctctcacattgtgaaggaaacagacacattcaaattgaccagcaatgaaattataaaccgcttttgcaagtgttg |
28097857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26849526 - 26849461
Alignment:
| Q |
64 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt |
129 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||| |||||||| |
|
|
| T |
26849526 |
ttcaaattgatcagcaatcgaattataaactgcttgagcaagtgttgtttttcccattcctccagt |
26849461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 28243626 - 28243538
Alignment:
| Q |
47 |
tgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata |
135 |
Q |
| |
|
||||||||||||| || |||||||||||||| | |||||||||||||| |||||||||||| || ||||| || ||||| ||||| |
|
|
| T |
28243626 |
tgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccata |
28243538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 26950593 - 26950511
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttg |
110 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||| | ||||||||||| ||||| || ||||||||||||| |||||||||| |
|
|
| T |
26950593 |
tgaattttctctcacattgtgaagaaaacatttgcattcaaattgattagcaatcaagttataaactgcttgagcaagtgttg |
26950511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26975765 - 26975700
Alignment:
| Q |
64 |
ttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagt |
129 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| |||||||||| |||||||| || ||||| |
|
|
| T |
26975765 |
ttcaaattgattagcaatcaaattataaactgcttgagcaagtgttgtcttacccattcccccagt |
26975700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 29843338 - 29843410
Alignment:
| Q |
47 |
tgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttaccca |
119 |
Q |
| |
|
||||||||||| | || |||||||| |||||||| |||||||||| |||| |||||||||| |||||||| |
|
|
| T |
29843338 |
tgaagaaaacacaaacattcaaatttatcagcaatcaaattataaattgctcgagcaagtgttgttttaccca |
29843410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 28163706 - 28163904
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
||||||||||||| |||| | |||||||||| || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
28163706 |
ttgaattctctctcacatcttctagaaaacataaaccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctcc |
28163805 |
T |
|
| Q |
127 |
agtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtattt |
225 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| ||| | ||| | || ||||||||||||||||||| || | | || |||||||||||||| ||||| |
|
|
| T |
28163806 |
agtatcataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaatttcacttgttgtacttgagattgtaatccaacaggatattt |
28163904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 28127029 - 28127212
Alignment:
| Q |
50 |
agaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgc |
149 |
Q |
| |
|
|||||||||| || ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
28127029 |
agaaaacataaaccttcaaattgatcagcaatgaaattataaattgcttttgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgt |
28127128 |
T |
|
| Q |
150 |
ggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttggctacat |
233 |
Q |
| |
|
|||||||||| ||| | ||| | || |||||||| |||||||||| || | || ||||||||||||||| |||||||| |||| |
|
|
| T |
28127129 |
ggacctcatcatcatatcccttatcgagaagcaaattcacttgttgtacttggtcctgtaatccaacaggatatttggcaacat |
28127212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 267672 - 267877
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||| ||||| |||| |||||||||||||| | ||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
267672 |
tgaattttctctcacatcatgaagaaaacataatccttcaaattgatcagcaataaaattatagattgctcttgcaagggttgatttacccaagcctcca |
267771 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| ||||| || | |||||||||||||||||||||| || | | ||| ||||||||||||||| |||| |
|
|
| T |
267772 |
atcccataaattccaaccatatggaccccatcatcagatccattatcaagaagcaatttcacttgttgtacttgagaccataatccaacagggtaattgg |
267871 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
267872 |
caacat |
267877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 8337 - 8132
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
8337 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctcca |
8238 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||| || ||||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| |
|
|
| T |
8237 |
gtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg |
8138 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
8137 |
caacat |
8132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 13007 - 13212
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
13007 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaattataaattgcttttccaagtgttgatttacccaagcctcca |
13106 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||| || ||||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| |
|
|
| T |
13107 |
gtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg |
13206 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
13207 |
caacat |
13212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 4044 - 4249
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | |||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
4044 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattcatcagcaataaaattataaattgcttttccaagtgttgatttacccaagcctcca |
4143 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| || | ||| ||||| || ||||||||| ||||||| |||| || ||| |||||||||||||||||||| |||| |
|
|
| T |
4144 |
gtaccataaagtcctaccatgtgggctccatgatcagatccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattgg |
4243 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
4244 |
caacat |
4249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 18698728 - 18698933
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
18698728 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgctttcgcaagtgttgatttacccatgcctcca |
18698827 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| ||||||||||||| ||||||||| |||| ||||| || | ||||||||| ||||||||||| || ||| ||||| |||||||||||||| |||| |
|
|
| T |
18698828 |
atgccataaagtcctaacatgcggactccatcatcagatcctttatcaagaagcgctttcacttgttgtactcgagactgcaatccaacagggtaattgg |
18698927 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
18698928 |
caacat |
18698933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 18678888 - 18679093
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
18678888 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttaatttacccatgcctcca |
18678987 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| ||||||||||||||||||||||| |||| | ||| | ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |||| |
|
|
| T |
18678988 |
atgccataaagtcctaccatgcggactccatcataagatcattcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattgg |
18679087 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
18679088 |
caacat |
18679093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 18723413 - 18723607
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| || || | |||||||||| | ||||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||||||| |
|
|
| T |
18723413 |
tgaattctctctcacgttttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattccttttgcaagtgttgattttcccatgcctcca |
18723512 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
||||||||||||||| ||||||||| || | | ||| || | ||||||||| |||||||||||| || ||| ||||| || ||||||||||| |
|
|
| T |
18723513 |
ataccataaagtcctatcatgcggactccaccattagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta |
18723607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 18730832 - 18731026
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| | |||| |||||||||||||| |||||||||||| |
|
|
| T |
18730832 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattactttagcaagtgttgattttcccatgcctcca |
18730931 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
||||||||||||||| ||||||||| || | | ||| || | ||||||||| |||||||||||| || ||| ||||| || ||||||||||| |
|
|
| T |
18730932 |
ataccataaagtcctatcatgcggactccaccataagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta |
18731026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 18074611 - 18074417
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
||||||||||||||| | | ||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| |
|
|
| T |
18074611 |
tgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctcca |
18074512 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| |||| ||| ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
18074511 |
atcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta |
18074417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 18654805 - 18654999
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||| ||||| ||||| | |||||||||| | ||||||||||||||||| | |||||| || || |||||||||||||||||| |||||||||||| |
|
|
| T |
18654805 |
tgaattttctctcacattttcaagaaaacatgagcattcaaattgatcagcaatacaattattaattgattttgcaagtgttgattttcccatgcctcca |
18654904 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
||||||||||||||| ||||||||| || | ||||| || | ||||||||| |||||||||||| || ||| ||||| || ||||||||||| |
|
|
| T |
18654905 |
ataccataaagtcctatcatgcggactccaccatcagatcctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggta |
18654999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 5090284 - 5090392
Alignment:
| Q |
27 |
ttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcc |
126 |
Q |
| |
|
||||||| ||||| ||||| |||||||||| | || ||||||||||| ||||| ||||| |||| ||||||| ||||||| | ||||||||| ||||| |
|
|
| T |
5090284 |
ttgaattttctctcacattgggaagaaaacaaagacattcaaattgatgagcaatgaaattgtaaattgcttttccaagtgtggttttacccattcctcc |
5090383 |
T |
|
| Q |
127 |
agtaccata |
135 |
Q |
| |
|
||| ||||| |
|
|
| T |
5090384 |
agtcccata |
5090392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 2871 - 3076
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| ||||| | |||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
2871 |
tgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattataaattgcttttgcaagtgttgatttacccaatcctcca |
2970 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
||||||||||||||||||||| |||| |||| ||||| | ||||||||| |||||||||||| || ||| |||| | |||||||||||| |||| |
|
|
| T |
2971 |
gtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgatttcacttgttgtactcgagacttcattccaacagggtaattgg |
3070 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
3071 |
caacat |
3076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 29273170 - 29273375
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| | ||||||||||||||||| ||||||||| | |||| ||||||| ||||||||||||| ||| ||| |
|
|
| T |
29273170 |
tgaattctctctcacatcatgaagaaaacataaatcttcaaattgatcagcaaaaaaattatagattgctcttgcaagggttgatttacccaagccacca |
29273269 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggtatttgg |
227 |
Q |
| |
|
| ||||||| ||| ||||| ||| | |||| ||||| || | ||||||||| |||| ||||||| || | | ||||||||||||||||||||||||| |
|
|
| T |
29273270 |
atcccataaattccaaccatatggatcccatcatcagatccattatcaagaagcgatttgacttgttgtacttgagactgtaatccaacagggtatttgg |
29273369 |
T |
|
| Q |
228 |
ctacat |
233 |
Q |
| |
|
| |||| |
|
|
| T |
29273370 |
caacat |
29273375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 60419 - 60225
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
||||||||||||||| | | ||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| |
|
|
| T |
60419 |
tgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaattatagattgctcttgcaagtgttgatttacctgagcctcca |
60320 |
T |
|
| Q |
128 |
gtaccataaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgttctattcgggactgtaatccaacagggta |
222 |
Q |
| |
|
| ||||||| ||| ||||| ||||| |||| |||| ||| ||||||||| |||||||||||| || ||| ||||| |||||||||||||| |
|
|
| T |
60319 |
atcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggta |
60225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 3280509 - 3280410
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||| |||||| |
|
|
| T |
3280509 |
tgaattttctctcacattgtgaagaaaacatacacattcaaattgattagcaatgaaattataaactgctcttgcaagagttgtcttacccattcctcca |
3280410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 17992547 - 17992652
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||| || || |||||||| |||||| |||||||||||||||| ||||| |||| || ||||| || ||| |
|
|
| T |
17992547 |
tgaattttctctcacattgtgaaggaaacacttacattgaaattgattagcaaccaaattataaactgcttgagcaagagttgtcttgcccattccacca |
17992646 |
T |
|
| Q |
128 |
gtacca |
133 |
Q |
| |
|
|||||| |
|
|
| T |
17992647 |
gtacca |
17992652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 16691717 - 16691618
Alignment:
| Q |
28 |
tgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctcca |
127 |
Q |
| |
|
|||||| ||||| || | |||||||||||| | || ||||||||||||||||| |||||||||| |||| |||||||||| |||||| || |||||| |
|
|
| T |
16691717 |
tgaattttctctcacgtcatgaagaaaacacaaacattcaaattgatcagcaatcaaattataaattgctcgagcaagtgttgttttaccgattcctcca |
16691618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 43788 - 43700
Alignment:
| Q |
47 |
tgaagaaaacatacactttcaaattgatcagcaacaaaattataaactgcttttgcaagtgttgatttacccatgcctccagtaccata |
135 |
Q |
| |
|
||||||||||||| || |||||||||||||| | |||||||||||||| |||||||||||| || ||||| || ||||| ||||| |
|
|
| T |
43788 |
tgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccata |
43700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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