View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3375_low_44 (Length: 236)
Name: NF3375_low_44
Description: NF3375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3375_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 39425195 - 39425267
Alignment:
| Q |
145 |
ataatacaccataaattaaatcatgtacaattaagatttaattgatagtaacatttttcatttaagaagtatgatg |
220 |
Q |
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| T |
39425195 |
ataatacaccataaattaaatcatgtacaattaagatttaattga---taacatttttcatttaagaagtatgatg |
39425267 |
T |
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