View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3376-Insertion-11 (Length: 440)
Name: NF3376-Insertion-11
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3376-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 8 - 440
Target Start/End: Complemental strand, 6913 - 6482
Alignment:
| Q |
8 |
aaaatccaacttttccatgatggnnnnnnncctcacttaccccggctaaatgccaccgctagaccatcagacttgaaataaaacctctaaaatgtaataa |
107 |
Q |
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| T |
6913 |
aaaatccaactttcccatgatgaaaaaaaacctcacttaccccggctaaatgccaccgctagaccatcagacttgaaataaaacctctaaaatgtaataa |
6814 |
T |
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| Q |
108 |
gttagacttaatttccctcnnnnnnnnngttagacttatttaatttttgaactatacctaatttatttaagcaaagttcataacagcctaacatggtcta |
207 |
Q |
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| T |
6813 |
gttagacttaatttccctcaaaaaaaa-gttagacttatttaatttttgaactatacctaatttatttaagcaaagttcataacagcctaacatggtcta |
6715 |
T |
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| Q |
208 |
ttttctatccttagtggcgggcgagagagaaatgaaagtagctttcagggattctggaattacaaaacaaaatttctcnnnnnnnccatccaaacttttg |
307 |
Q |
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| T |
6714 |
ttttctatccttagtggcgggcgagagagaaatgaaagtagctttcagggattctggaattacaaaacaaaatttctctttttttccatccaaacttttg |
6615 |
T |
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| Q |
308 |
tagttacaaagaaacttcctcaaaaggaccatcaatgtaaccaatctttaagaaaagatatgtcttttttgtgtgctaggctgccagctagttccttccc |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6614 |
tagttacaaagaaacttcctcaaaaggaccatcaatgtaaccaatctttaagaaaagatatgtcttttttgtgtgctaggctgccagctagttccttccc |
6515 |
T |
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| Q |
408 |
ttttctttgatatcatctatctatatattctct |
440 |
Q |
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| T |
6514 |
ttttctttgatatcatctatctatatattctct |
6482 |
T |
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