View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3376-Insertion-13 (Length: 324)
Name: NF3376-Insertion-13
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3376-Insertion-13 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 8 - 265
Target Start/End: Original strand, 4409023 - 4409280
Alignment:
| Q |
8 |
ttatttgcaacattttctttaccttatcacagtatcatgtaactcttgtttctactcaagttaccaacttgttttaaattttgctaaaaaagctaaaatg |
107 |
Q |
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| T |
4409023 |
ttatttgcaacattttctttaccttatcacagtatcatgtaactcttgtttctactcaagttaccaacttgttttaaattttgctaaaaaagctaaaatg |
4409122 |
T |
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| Q |
108 |
tttctttctgtatgcacctgctatgctatgaacagagagagagtgaaatatagcagtgattcagataaatgatcagagagagagtgaaaagatgggccct |
207 |
Q |
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| T |
4409123 |
tttctttctgtatgcacctgctatgctatgaacagagagagagtgaaatatagcagtgattcagataaatgatcagagagagagtgaaaagatgggccct |
4409222 |
T |
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| Q |
208 |
ctaaagcctgaaacagaaatgagtggcactgcaccaaacactatacactgtatcaatg |
265 |
Q |
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| T |
4409223 |
ctaaagcctgaaacagaaatgagtggcactgcaccaaacactatacactgtatcaatg |
4409280 |
T |
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