View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3376_high_103 (Length: 227)
Name: NF3376_high_103
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3376_high_103 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 3100173 - 3099947
Alignment:
| Q |
1 |
gtccactttcctccatcaatttctccttcaactcttctacactacttcctttaaaggtaaataatgaccctttatttgcatcaataacttcacctttttc |
100 |
Q |
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| T |
3100173 |
gtccagtttcctccaacaatttctccttcaactcttctacactacttcctttaaaggtaaataatgaccctttatttgcatcaataacttcaccattttc |
3100074 |
T |
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| Q |
101 |
attaccaacatcataaaatataaccctaccttctttaactggtgatggagaaggatcttctaaatattcaagttgctcctggtaaattaaaagaagaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3100073 |
attaccaacatcataaaatataaccctaccttctttaactggtgatggagaaggatcttctaaatattcaagttgctcctggtaaattaaaagaagaaaa |
3099974 |
T |
|
| Q |
201 |
atgttagctgaatagaatattgataat |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
3099973 |
atgttagctgaatagaatattgataat |
3099947 |
T |
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