View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3376_high_91 (Length: 247)
Name: NF3376_high_91
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3376_high_91 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 42341854 - 42341619
Alignment:
| Q |
1 |
accaccctttcaacaggaccatcaaccatcctctttcttcctcgtaaaccattcatatcaatcccaaattgaccacccgagttttcatttccaatcccat |
100 |
Q |
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| T |
42341854 |
accaccctttcaacaggaccatcaaccatcctctttcttcctcgtaaaccattcatatcaatcccaaattgaccacccgagttttcgtttccaatcccat |
42341755 |
T |
|
| Q |
101 |
ccgatgaaaccggactaacaggtccacccattcccatagtttgtgccactgccatgccataaccgcccgctgctccattcaccactctccctccgtaaca |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42341754 |
ccgatgaaaccggactaacaggtccgcccattcccatagtttgtgccactgccacgccataaccgcccgctgctccattcaccactctccctccgtaaca |
42341655 |
T |
|
| Q |
201 |
aacagctggcggcggtggaggataccccgtacctat |
236 |
Q |
| |
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|| |||||||||||| |||||||||||||||||||| |
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| T |
42341654 |
aatagctggcggcggcggaggataccccgtacctat |
42341619 |
T |
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