View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3376_low_53 (Length: 332)

Name: NF3376_low_53
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3376_low_53
NF3376_low_53
[»] chr7 (28 HSPs)
chr7 (124-332)||(10865929-10866135)
chr7 (5-86)||(9509686-9509767)
chr7 (5-86)||(12699329-12699410)
chr7 (13-78)||(38227985-38228050)
chr7 (5-78)||(3563915-3563988)
chr7 (5-86)||(39267189-39267270)
chr7 (5-86)||(9751093-9751174)
chr7 (5-76)||(27847397-27847468)
chr7 (5-85)||(26212482-26212562)
chr7 (5-88)||(11995599-11995682)
chr7 (5-88)||(15754428-15754511)
chr7 (5-76)||(34201280-34201351)
chr7 (17-77)||(12756268-12756329)
chr7 (6-75)||(15143590-15143659)
chr7 (5-86)||(18302675-18302756)
chr7 (5-76)||(810681-810753)
chr7 (16-88)||(40443885-40443957)
chr7 (5-78)||(16219267-16219340)
chr7 (5-76)||(44117001-44117073)
chr7 (37-76)||(9703772-9703811)
chr7 (4-78)||(47832304-47832378)
chr7 (37-78)||(9389267-9389308)
chr7 (37-73)||(21064717-21064753)
chr7 (46-76)||(11880789-11880819)
chr7 (46-76)||(24055005-24055035)
chr7 (37-78)||(17061532-17061573)
chr7 (5-76)||(68243-68315)
chr7 (5-76)||(19649037-19649109)
[»] chr1 (25 HSPs)
chr1 (6-88)||(22355726-22355808)
chr1 (5-86)||(50209757-50209838)
chr1 (5-88)||(27250281-27250364)
chr1 (5-78)||(22354123-22354196)
chr1 (13-77)||(433512-433576)
chr1 (13-86)||(21301081-21301154)
chr1 (5-88)||(21027166-21027249)
chr1 (13-86)||(20228364-20228437)
chr1 (5-78)||(34510277-34510350)
chr1 (5-86)||(20135684-20135766)
chr1 (5-78)||(22532766-22532839)
chr1 (5-88)||(20846771-20846854)
chr1 (5-76)||(38800955-38801026)
chr1 (6-56)||(22357444-22357494)
chr1 (5-82)||(20919098-20919175)
chr1 (42-76)||(21754577-21754611)
chr1 (5-78)||(22921418-22921491)
chr1 (5-77)||(20091026-20091098)
chr1 (5-76)||(33681506-33681578)
chr1 (42-86)||(33798040-33798084)
chr1 (39-78)||(35260629-35260668)
chr1 (5-82)||(22468243-22468321)
chr1 (36-77)||(26065520-26065561)
chr1 (47-76)||(42864764-42864793)
chr1 (5-78)||(43697857-43697930)
[»] scaffold0292 (2 HSPs)
scaffold0292 (5-86)||(839-920)
scaffold0292 (46-86)||(3987-4027)
[»] chr8 (33 HSPs)
chr8 (5-86)||(18817953-18818034)
chr8 (5-86)||(18878780-18878861)
chr8 (5-86)||(19800970-19801051)
chr8 (5-86)||(20536705-20536786)
chr8 (5-86)||(23406878-23406959)
chr8 (5-78)||(21923479-21923552)
chr8 (5-76)||(41598681-41598752)
chr8 (5-86)||(7373246-7373328)
chr8 (6-76)||(45130584-45130654)
chr8 (5-82)||(16091888-16091965)
chr8 (5-76)||(5865830-5865901)
chr8 (5-76)||(21249878-21249949)
chr8 (5-78)||(21860063-21860136)
chr8 (5-78)||(22875562-22875635)
chr8 (13-78)||(28648595-28648660)
chr8 (5-72)||(17141410-17141477)
chr8 (5-76)||(21255716-21255787)
chr8 (5-76)||(31971741-31971812)
chr8 (5-67)||(16199220-16199282)
chr8 (13-78)||(6759762-6759827)
chr8 (8-76)||(21918563-21918631)
chr8 (5-78)||(21286718-21286791)
chr8 (5-78)||(22627232-22627305)
chr8 (21-82)||(6520881-6520942)
chr8 (35-76)||(22526099-22526140)
chr8 (13-86)||(23649058-23649131)
chr8 (5-76)||(21389005-21389077)
chr8 (25-76)||(26355250-26355301)
chr8 (35-76)||(17438982-17439023)
chr8 (35-76)||(22365266-22365307)
chr8 (35-76)||(37115978-37116019)
chr8 (5-76)||(21395529-21395601)
chr8 (5-76)||(21790022-21790094)
[»] scaffold0305 (1 HSPs)
scaffold0305 (5-86)||(20900-20981)
[»] scaffold0016 (1 HSPs)
scaffold0016 (13-86)||(2356-2429)
[»] scaffold0003 (2 HSPs)
scaffold0003 (5-82)||(339498-339575)
scaffold0003 (5-86)||(71783-71864)
[»] chr6 (26 HSPs)
chr6 (5-86)||(22779770-22779851)
chr6 (5-86)||(17287339-17287420)
chr6 (13-88)||(20637835-20637910)
chr6 (5-86)||(27415497-27415578)
chr6 (5-78)||(28496024-28496097)
chr6 (5-78)||(29808434-29808507)
chr6 (5-86)||(1645175-1645256)
chr6 (5-78)||(18457211-18457285)
chr6 (16-76)||(16920197-16920257)
chr6 (5-88)||(1561800-1561883)
chr6 (5-78)||(18409378-18409451)
chr6 (5-86)||(21939880-21939961)
chr6 (5-78)||(22080287-22080361)
chr6 (13-78)||(25628906-25628971)
chr6 (18-78)||(23019917-23019977)
chr6 (42-76)||(22832026-22832060)
chr6 (5-78)||(19303092-19303165)
chr6 (5-78)||(25956172-25956245)
chr6 (5-76)||(19863474-19863546)
chr6 (45-78)||(15539816-15539849)
chr6 (35-76)||(18230771-18230812)
chr6 (35-76)||(18231153-18231194)
chr6 (35-76)||(20224546-20224587)
chr6 (35-76)||(22118530-22118571)
chr6 (42-78)||(20594286-20594322)
chr6 (5-76)||(22439296-22439368)
[»] chr5 (28 HSPs)
chr5 (13-86)||(23390039-23390112)
chr5 (5-86)||(25422029-25422110)
chr5 (5-76)||(21985700-21985771)
chr5 (5-78)||(1096964-1097037)
chr5 (5-78)||(20910363-20910436)
chr5 (5-86)||(22119736-22119817)
chr5 (5-78)||(24494065-24494138)
chr5 (5-86)||(25431891-25431972)
chr5 (5-78)||(11580795-11580869)
chr5 (5-88)||(22075505-22075588)
chr5 (17-78)||(29916637-29916699)
chr5 (5-74)||(9078449-9078518)
chr5 (5-86)||(19660380-19660461)
chr5 (13-86)||(21871114-21871187)
chr5 (13-86)||(21875394-21875467)
chr5 (18-86)||(21498560-21498628)
chr5 (5-76)||(22106937-22107008)
chr5 (5-74)||(24529718-24529787)
chr5 (18-78)||(21329046-21329106)
chr5 (47-82)||(8286422-8286457)
chr5 (37-87)||(22144578-22144628)
chr5 (37-78)||(36154400-36154441)
chr5 (5-76)||(23201863-23201935)
chr5 (26-86)||(24766885-24766945)
chr5 (46-76)||(14079684-14079714)
chr5 (7-56)||(5888748-5888797)
chr5 (5-78)||(26011585-26011658)
chr5 (5-76)||(22959085-22959157)
[»] chr4 (36 HSPs)
chr4 (5-86)||(22636931-22637012)
chr4 (5-86)||(44053326-44053407)
chr4 (5-88)||(12903242-12903325)
chr4 (5-88)||(16239533-16239616)
chr4 (5-76)||(3097129-3097200)
chr4 (13-88)||(7089371-7089446)
chr4 (5-86)||(3332315-3332396)
chr4 (5-78)||(20156841-20156914)
chr4 (5-86)||(24029238-24029319)
chr4 (5-76)||(15552310-15552382)
chr4 (5-78)||(12774495-12774569)
chr4 (5-78)||(44102706-44102780)
chr4 (5-74)||(14052869-14052938)
chr4 (5-78)||(15091394-15091467)
chr4 (16-76)||(17053539-17053599)
chr4 (8-78)||(16377073-16377143)
chr4 (13-78)||(44928474-44928539)
chr4 (42-86)||(7799210-7799254)
chr4 (45-88)||(23374074-23374117)
chr4 (5-78)||(6190930-6191004)
chr4 (5-78)||(21815182-21815256)
chr4 (4-78)||(39705839-39705913)
chr4 (25-78)||(21818275-21818328)
chr4 (5-86)||(22633756-22633837)
chr4 (5-78)||(43198139-43198212)
chr4 (37-76)||(10314244-10314283)
chr4 (13-56)||(14039154-14039197)
chr4 (5-88)||(16597142-16597225)
chr4 (46-76)||(13570048-13570078)
chr4 (46-76)||(23844015-23844045)
chr4 (46-76)||(44676168-44676198)
chr4 (43-76)||(8846889-8846922)
chr4 (35-76)||(53081652-53081693)
chr4 (36-76)||(12287686-12287726)
chr4 (18-78)||(13845049-13845109)
chr4 (40-76)||(15121356-15121392)
[»] scaffold1842 (1 HSPs)
scaffold1842 (5-89)||(600-684)
[»] scaffold0011 (2 HSPs)
scaffold0011 (5-89)||(167530-167614)
scaffold0011 (5-86)||(52409-52490)
[»] chr3 (47 HSPs)
chr3 (6-86)||(184318-184398)
chr3 (5-88)||(13442749-13442832)
chr3 (13-86)||(17499844-17499917)
chr3 (5-83)||(20697993-20698071)
chr3 (13-86)||(17488362-17488435)
chr3 (5-78)||(26687384-26687457)
chr3 (4-78)||(17247837-17247911)
chr3 (5-86)||(11424306-11424387)
chr3 (5-86)||(43842675-43842756)
chr3 (5-88)||(13209869-13209952)
chr3 (5-76)||(14179819-14179890)
chr3 (13-78)||(53070249-53070315)
chr3 (5-78)||(14666102-14666175)
chr3 (5-78)||(14735615-14735688)
chr3 (5-78)||(23082912-23082985)
chr3 (14-78)||(17247084-17247148)
chr3 (5-82)||(12933856-12933934)
chr3 (5-78)||(14973351-14973424)
chr3 (5-78)||(18439031-18439104)
chr3 (5-78)||(25475936-25476009)
chr3 (5-76)||(9513407-9513479)
chr3 (5-76)||(9521382-9521454)
chr3 (13-85)||(12851908-12851980)
chr3 (16-76)||(16809893-16809953)
chr3 (5-76)||(4588368-4588439)
chr3 (5-76)||(42386908-42386979)
chr3 (5-86)||(30030325-30030406)
chr3 (5-76)||(1644235-1644307)
chr3 (18-78)||(14669367-14669427)
chr3 (5-78)||(16104277-16104351)
chr3 (5-75)||(40213275-40213345)
chr3 (22-82)||(14235004-14235064)
chr3 (18-81)||(15471434-15471497)
chr3 (5-75)||(49389197-49389268)
chr3 (5-86)||(12399692-12399772)
chr3 (46-82)||(23408967-23409003)
chr3 (5-76)||(49667636-49667708)
chr3 (25-76)||(32308186-32308237)
chr3 (46-76)||(17524727-17524757)
chr3 (36-78)||(52523279-52523321)
chr3 (47-76)||(321567-321596)
chr3 (124-172)||(379353-379404)
chr3 (35-76)||(21838035-21838076)
chr3 (3-75)||(22109830-22109903)
chr3 (5-76)||(12171669-12171741)
chr3 (5-76)||(15877381-15877453)
chr3 (17-76)||(16097839-16097899)
[»] scaffold0647 (1 HSPs)
scaffold0647 (5-88)||(5662-5745)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-88)||(13697-13780)
[»] chr2 (25 HSPs)
chr2 (7-86)||(23076937-23077016)
chr2 (5-88)||(23653951-23654034)
chr2 (13-88)||(23286355-23286430)
chr2 (13-86)||(23060835-23060908)
chr2 (8-86)||(27754075-27754153)
chr2 (5-78)||(23660519-23660592)
chr2 (5-74)||(28291857-28291926)
chr2 (5-78)||(32451479-32451553)
chr2 (5-76)||(20309591-20309662)
chr2 (5-74)||(298369-298439)
chr2 (16-86)||(22730776-22730846)
chr2 (16-76)||(37680-37740)
chr2 (5-76)||(40621762-40621833)
chr2 (13-78)||(22337620-22337685)
chr2 (13-74)||(22737735-22737796)
chr2 (4-78)||(7679792-7679866)
chr2 (17-75)||(23038541-23038599)
chr2 (5-76)||(22133769-22133841)
chr2 (5-76)||(22740513-22740585)
chr2 (16-84)||(24658145-24658213)
chr2 (46-76)||(22758268-22758298)
chr2 (36-77)||(20519670-20519711)
chr2 (46-75)||(22798680-22798709)
chr2 (42-78)||(22412612-22412648)
chr2 (18-78)||(23705830-23705890)
[»] scaffold0056 (2 HSPs)
scaffold0056 (5-83)||(16761-16839)
scaffold0056 (5-86)||(78905-78986)
[»] scaffold0540 (1 HSPs)
scaffold0540 (5-86)||(556-637)
[»] scaffold0122 (2 HSPs)
scaffold0122 (13-86)||(25608-25681)
scaffold0122 (5-75)||(33048-33118)
[»] scaffold0080 (1 HSPs)
scaffold0080 (5-78)||(40408-40481)
[»] scaffold0413 (1 HSPs)
scaffold0413 (5-83)||(15161-15239)
[»] scaffold0839 (1 HSPs)
scaffold0839 (5-86)||(1621-1702)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-78)||(17559-17632)
[»] scaffold0031 (2 HSPs)
scaffold0031 (5-86)||(19969-20050)
scaffold0031 (5-76)||(65346-65418)
[»] scaffold0021 (3 HSPs)
scaffold0021 (5-86)||(125079-125160)
scaffold0021 (5-76)||(63058-63130)
scaffold0021 (5-76)||(175261-175333)
[»] scaffold0389 (1 HSPs)
scaffold0389 (5-87)||(13150-13232)
[»] scaffold0358 (2 HSPs)
scaffold0358 (5-75)||(422-492)
scaffold0358 (5-75)||(5198-5268)
[»] scaffold2044 (1 HSPs)
scaffold2044 (13-86)||(999-1072)
[»] scaffold0247 (1 HSPs)
scaffold0247 (13-86)||(6371-6444)
[»] scaffold0228 (3 HSPs)
scaffold0228 (13-82)||(5013-5082)
scaffold0228 (13-82)||(12595-12664)
scaffold0228 (13-82)||(22547-22616)
[»] scaffold0175 (2 HSPs)
scaffold0175 (13-86)||(13597-13670)
scaffold0175 (5-76)||(34617-34688)
[»] scaffold0124 (1 HSPs)
scaffold0124 (5-86)||(24193-24274)
[»] scaffold0088 (1 HSPs)
scaffold0088 (13-82)||(21395-21464)
[»] scaffold0084 (1 HSPs)
scaffold0084 (5-82)||(10655-10732)
[»] scaffold0026 (2 HSPs)
scaffold0026 (5-86)||(39474-39555)
scaffold0026 (5-74)||(40353-40422)
[»] scaffold1992 (1 HSPs)
scaffold1992 (5-88)||(289-373)
[»] scaffold0718 (1 HSPs)
scaffold0718 (5-76)||(4695-4766)
[»] scaffold0351 (2 HSPs)
scaffold0351 (5-76)||(16765-16836)
scaffold0351 (46-76)||(16881-16911)
[»] scaffold0151 (1 HSPs)
scaffold0151 (5-75)||(10641-10711)
[»] scaffold0627 (1 HSPs)
scaffold0627 (5-78)||(401-474)
[»] scaffold0364 (1 HSPs)
scaffold0364 (5-78)||(17171-17244)
[»] scaffold0266 (1 HSPs)
scaffold0266 (5-78)||(18509-18582)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-78)||(5020-5093)
[»] scaffold0598 (1 HSPs)
scaffold0598 (5-76)||(616-687)
[»] scaffold0490 (1 HSPs)
scaffold0490 (5-88)||(2438-2521)
[»] scaffold0456 (1 HSPs)
scaffold0456 (5-76)||(9990-10061)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-88)||(14974-15057)
[»] scaffold0142 (1 HSPs)
scaffold0142 (5-78)||(17277-17351)
[»] scaffold0042 (1 HSPs)
scaffold0042 (13-75)||(23856-23918)
[»] scaffold0876 (1 HSPs)
scaffold0876 (5-78)||(2636-2709)
[»] scaffold0395 (2 HSPs)
scaffold0395 (5-78)||(513-586)
scaffold0395 (37-76)||(8044-8083)
[»] scaffold0347 (1 HSPs)
scaffold0347 (5-86)||(524-605)
[»] scaffold0261 (1 HSPs)
scaffold0261 (5-88)||(16155-16238)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-76)||(47472-47543)
[»] scaffold0628 (1 HSPs)
scaffold0628 (5-79)||(2353-2427)
[»] scaffold0427 (1 HSPs)
scaffold0427 (5-75)||(13981-14051)
[»] scaffold0120 (2 HSPs)
scaffold0120 (5-83)||(46422-46500)
scaffold0120 (5-78)||(32510-32583)
[»] scaffold0059 (1 HSPs)
scaffold0059 (24-86)||(19308-19370)
[»] scaffold0121 (1 HSPs)
scaffold0121 (13-86)||(8076-8149)
[»] scaffold0100 (1 HSPs)
scaffold0100 (5-78)||(20609-20682)
[»] scaffold0037 (1 HSPs)
scaffold0037 (5-74)||(79887-79956)
[»] scaffold0211 (1 HSPs)
scaffold0211 (5-76)||(28361-28433)
[»] scaffold1137 (1 HSPs)
scaffold1137 (17-76)||(1854-1913)
[»] scaffold0423 (1 HSPs)
scaffold0423 (5-76)||(10825-10896)
[»] scaffold0114 (2 HSPs)
scaffold0114 (5-76)||(15029-15100)
scaffold0114 (5-76)||(32829-32900)
[»] scaffold0810 (1 HSPs)
scaffold0810 (5-78)||(3429-3503)
[»] scaffold0639 (1 HSPs)
scaffold0639 (5-55)||(8972-9022)
[»] scaffold0503 (1 HSPs)
scaffold0503 (5-78)||(12425-12499)
[»] scaffold0167 (1 HSPs)
scaffold0167 (16-86)||(35935-36005)
[»] scaffold0113 (1 HSPs)
scaffold0113 (46-88)||(32591-32633)
[»] scaffold0028 (1 HSPs)
scaffold0028 (22-76)||(1-55)
[»] scaffold0217 (1 HSPs)
scaffold0217 (13-78)||(16150-16215)
[»] scaffold0145 (1 HSPs)
scaffold0145 (52-89)||(39293-39330)
[»] scaffold0138 (1 HSPs)
scaffold0138 (5-78)||(13437-13510)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-78)||(14981-15046)
[»] scaffold0207 (1 HSPs)
scaffold0207 (5-76)||(2196-2268)
[»] scaffold0161 (1 HSPs)
scaffold0161 (16-88)||(1986-2058)
[»] scaffold0555 (2 HSPs)
scaffold0555 (25-88)||(10108-10171)
scaffold0555 (5-75)||(1076-1146)
[»] scaffold0621 (1 HSPs)
scaffold0621 (5-74)||(7033-7103)
[»] scaffold0346 (1 HSPs)
scaffold0346 (16-86)||(17267-17337)
[»] scaffold0218 (2 HSPs)
scaffold0218 (46-88)||(28821-28863)
scaffold0218 (17-78)||(7572-7633)
[»] scaffold0034 (2 HSPs)
scaffold0034 (5-74)||(51438-51508)
scaffold0034 (36-78)||(33063-33105)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-78)||(101891-101965)
[»] scaffold1257 (1 HSPs)
scaffold1257 (5-78)||(1850-1923)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-78)||(7096-7168)
[»] scaffold0221 (1 HSPs)
scaffold0221 (5-78)||(12360-12433)
[»] scaffold0192 (1 HSPs)
scaffold0192 (17-86)||(10419-10488)
[»] scaffold0022 (1 HSPs)
scaffold0022 (35-76)||(80863-80904)
[»] scaffold0507 (1 HSPs)
scaffold0507 (18-78)||(7608-7668)
[»] scaffold0476 (1 HSPs)
scaffold0476 (4-76)||(8297-8369)
[»] scaffold0403 (1 HSPs)
scaffold0403 (16-88)||(5345-5417)
[»] scaffold0166 (1 HSPs)
scaffold0166 (26-86)||(9382-9442)
[»] scaffold0106 (3 HSPs)
scaffold0106 (17-76)||(1784-1844)
scaffold0106 (17-76)||(7761-7821)
scaffold0106 (5-73)||(16144-16213)
[»] scaffold0102 (1 HSPs)
scaffold0102 (42-78)||(19801-19837)
[»] scaffold0078 (1 HSPs)
scaffold0078 (18-78)||(11038-11098)
[»] scaffold0273 (1 HSPs)
scaffold0273 (18-81)||(8986-9049)
[»] scaffold0556 (1 HSPs)
scaffold0556 (5-74)||(7308-7378)
[»] scaffold0210 (2 HSPs)
scaffold0210 (46-76)||(21359-21389)
scaffold0210 (46-76)||(29251-29281)
[»] scaffold0131 (1 HSPs)
scaffold0131 (46-76)||(36993-37023)
[»] scaffold0101 (1 HSPs)
scaffold0101 (46-76)||(8510-8540)
[»] scaffold0040 (1 HSPs)
scaffold0040 (36-78)||(103136-103178)
[»] scaffold0004 (1 HSPs)
scaffold0004 (46-76)||(70332-70362)
[»] scaffold0001 (1 HSPs)
scaffold0001 (5-82)||(161182-161260)
[»] scaffold0010 (1 HSPs)
scaffold0010 (5-69)||(130404-130469)
[»] scaffold0324 (1 HSPs)
scaffold0324 (5-76)||(15895-15967)
[»] scaffold0032 (1 HSPs)
scaffold0032 (17-76)||(52076-52136)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-76)||(179157-179217)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 124 - 332
Target Start/End: Complemental strand, 10866135 - 10865929
Alignment:
Q  124 tagtgtggcttagcaagacgtttaataaaaagggcaagattgtcatttcctcctatatgggccacgtttcccccttttccccttcatttttctcgttttc 223  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| | ||     
T  10866135 tagtgtggcttagcaagacttttaataaaaagggcaagattgtcatttt-tcctatatgggccacgtt-cccccttttccccttcatttttctcttgttt 10866038  T
Q  224 ctctctcactagaacagattttatcctcccttctctctctaactccctcggccatccattcaccccgatctcatcaatttcatctaacactcaaataatc 323  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10866037 tcctctcactagaacagattttatcctcccttctctctctaactccctcggccatccattcaccccgatctcatcaatttcatctaacaatcaaataatc 10865938  T
Q  324 aacatgcaa 332  Q
    |||||||||    
T  10865937 aacatgcaa 10865929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 9509686 - 9509767
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  9509686 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggggaaaggtt 9509767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 12699329 - 12699410
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12699329 ctctctggtcaagctcgctaggcgacttcatctgcttgctatggcgagctgcgacgtgcaactcgcgaggtggggaaaggtt 12699410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 38227985 - 38228050
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  38227985 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 38228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 3563988 - 3563915
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  3563988 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 3563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 39267270 - 39267189
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  39267270 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 39267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 9751174 - 9751093
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  9751174 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgtaactcgcgaggcgaggaaaggtt 9751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 27847468 - 27847397
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  27847468 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 27847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 26212482 - 26212562
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 85  Q
    ||||||| || ||||||||||||||||||   || | || |||||||||||| ||||||||||||||||||||||||||||    
T  26212482 ctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaggt 26212562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 11995682 - 11995599
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| |||||||||||||||||||||   || || | |||||||||||| || ||||||| ||||||||||||||||||||    
T  11995682 ctctctggtcaagctcgctaggcgagttcaagtgttttccatggcgagctgcaacatgcaacttgcgaggcggggaaaggttac 11995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 15754511 - 15754428
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| |||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||||||||||||| |||||    
T  15754511 ctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcgaggcggggaaaagttac 15754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 34201280 - 34201351
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  34201280 ctctctggtctagctcgctaggcgagttcatctattcgctatggcgagctgcgatgtgcaactcgcgaggcg 34201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 12756329 - 12756268
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 77  Q
    |||||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  12756329 gctcgctatggcgagttcatctgctcgcgatggcgagctgcgacgtgcaactcgcgaggcgg 12756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 15143659 - 15143590
Alignment:
Q  6 tctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    |||||| |||||||||| |||||||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  15143659 tctctggtcaagctcgcaaggcgagttcatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 15143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 18302675 - 18302756
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||| |||||| ||||||||||  ||||| | | ||||||||||| ||||||||||||||||||| |||||||||    
T  18302675 ctctctggtcaggctcgcgaggcgagttcaactgctcgttgtggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 18302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 810753 - 810681
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  810753 ctctctggtcatgctcgctatggcgagttcatctgctcgctgtggcgagctgcgaggtgcaactcgcgaggcg 810681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 40443885 - 40443957
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||||||||||   || | ||  ||||||||||| |||||||||||||||||||||||||||||||    
T  40443885 agctcgctaggcgagttcaagtgttcgccgtggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 40443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 16219340 - 16219267
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  16219340 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 16219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 44117001 - 44117073
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| ||||| || ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  44117001 ctctctggtcatgctcgttatggcgagttcatctgctcgctatggtgagctgcgatgtgcaactcgcgaggcg 44117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 9703772 - 9703811
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9703772 tgctcgctatggcgagctgcgacgtgcaactcgcgaggcg 9703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 47832304 - 47832378
Alignment:
Q  4 cctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||| |||  ||||||||||||||   |||||| ||||||||||||||| |  ||||||||||||||||||    
T  47832304 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaagatgcaactcgcgaggcggg 47832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 9389308 - 9389267
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  9389308 tgctcgctatggcgagctgcgaggtgcaactcgcgaggcggg 9389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 21064753 - 21064717
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgag 73  Q
    |||||||||||||||||||||| ||||||||||||||    
T  21064753 tgcttgctatggcgagctgcgaagtgcaactcgcgag 21064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 11880789 - 11880819
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  11880789 tggcgagctgcgacgtgcaactcgcgaggcg 11880819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 24055005 - 24055035
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  24055005 tggcgagctgcgacgtgcaactcgcgaggcg 24055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 17061573 - 17061532
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  17061573 tgctcgctatggcgagctgcgacatgcaactcacgaggcggg 17061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 68243 - 68315
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| |  |||||| ||||||||| ||||| |||||||||||    
T  68243 ctctctggtcatgctcgctatggcgagttcatctgatcactatggtgagctgcgaggtgcacctcgcgaggcg 68315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 19649109 - 19649037
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||| ||||||||    
T  19649109 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaacttgcgaggcg 19649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 22355808 - 22355726
Alignment:
Q  6 tctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22355808 tctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 22355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 50209838 - 50209757
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50209838 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaaggtt 50209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 27250364 - 27250281
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  27250364 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgagacggggaaaagttac 27250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22354196 - 22354123
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  22354196 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 22354123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 433512 - 433576
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 77  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  433512 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcgg 433576  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 21301154 - 21301081
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  21301154 tcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacgaggcggggaaaggtt 21301081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 21027166 - 21027249
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || ||||||||||||||||||   || | || |||||||||||| |||||||||||||||||||||||||||||||    
T  21027166 ctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 21027249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 20228437 - 20228364
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||| |||||||||    
T  20228437 tcaagctcgcgaggcgagttcaactgctcgctatcgcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 20228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 34510277 - 34510350
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||| || | ||||||||||||| | |||||||||||||||||||    
T  34510277 ctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcaaggtgcaactcgcgaggcggg 34510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 20135684 - 20135766
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||||| ||  || |||| ||||||||||||||||||||||||    
T  20135684 ctctctggtcaagctcgctatggcgagttcatctgctcgctatggcaagtcgcaacgtacaactcgcgaggcggggaaaggtt 20135766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22532766 - 22532839
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||| | ||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  22532766 ctctctggtcaagctcgctcgacgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 22532839  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 20846854 - 20846771
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || ||||||||||||||||||   || | || |||||||| ||| |||||||||||||||||||||||||| ||||    
T  20846854 ctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagttgcaacgtgcaactcgcgaggcggggaaagattac 20846771  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 38801026 - 38800955
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || ||||||||||| |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  38801026 ctctctggtctagctcgctaggtgagttcatctgttcgctgtggcgagctgcgacgtgcaactcgtgaggcg 38800955  T

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Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 22357494 - 22357444
Alignment:
Q  6 tctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 56  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  22357494 tctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgc 22357444  T

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Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 20919098 - 20919175
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| || ||||||||||||||||||   || | || |||||||||||| |||||||||||| ||||||||||||    
T  20919098 ctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgtgaggcggggaaa 20919175  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 21754577 - 21754611
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||||||    
T  21754577 gctatggcgagctgcgacgtgcaactcgcgaggcg 21754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22921491 - 22921418
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||| ||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  22921491 ctctctggtcacactcgctaggtgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 22921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 20091098 - 20091026
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 77  Q
    ||||||| ||||||||||||||||||||   ||||| ||  ||||||| ||| ||||| ||||||||||||||    
T  20091098 ctctctggtcaagctcgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgaaactcgcgaggcgg 20091026  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 33681506 - 33681578
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||| | | |||||||||||||||    
T  33681506 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggagcaactcgcgaggcg 33681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 33798040 - 33798084
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||| |||||||||||||||| || |||||||||    
T  33798040 gctatggcgagctgcaacgtgcaactcgcgagacgaggaaaggtt 33798084  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 35260668 - 35260629
Alignment:
Q  39 cttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  35260668 cttgctatggcgagctgcaaggtgcaactcgcgaggcggg 35260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 22468321 - 22468243
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||| ||||| |||||    
T  22468321 ctctctgttcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcaaggcgaggaaa 22468243  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 26065520 - 26065561
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 77  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  26065520 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 26065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 42864793 - 42864764
Alignment:
Q  47 ggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||||||||||||||||||||||||    
T  42864793 ggcgagctgcgacgtgcaactcgcgaggcg 42864764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 43697857 - 43697930
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |||||||||    
T  43697857 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacgaggcggg 43697930  T

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Target: scaffold0292 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 839 - 920
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  839 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 3987 - 4027
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3987 tggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 18818034 - 18817953
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18818034 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 18817953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 18878861 - 18878780
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  18878861 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgatgcggggaaaggtt 18878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 19801051 - 19800970
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||    
T  19801051 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcgaggaaaggtt 19800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 20536705 - 20536786
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  20536705 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctatgacgtgcaactcgcgaggcggggaaaggtt 20536786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 23406878 - 23406959
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23406878 ctctctggtcaagctcgctaggccagttcatctgctcgttatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 23406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21923552 - 21923479
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  21923552 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 21923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 41598681 - 41598752
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  41598681 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 41598752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 7373246 - 7373328
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7373246 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 7373328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 45130654 - 45130584
Alignment:
Q  6 tctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  45130654 tctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 45130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 16091965 - 16091888
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||| ||||||    
T  16091965 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagcttcgatgtgcaactcgcgaggctgggaaa 16091888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 5865901 - 5865830
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  5865901 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 5865830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 21249878 - 21249949
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  21249878 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 21249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21860136 - 21860063
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||||    
T  21860136 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggtgagctgcgacgagcaactcgcgaggcggg 21860063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22875562 - 22875635
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | |||||||||||||||||||    
T  22875562 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcaaggtgcaactcgcgaggcggg 22875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 28648660 - 28648595
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  28648660 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 28648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 17141410 - 17141477
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 72  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||    
T  17141410 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcga 17141477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 21255716 - 21255787
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||    
T  21255716 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgatgtgcaactcgcgaggcg 21255787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 31971741 - 31971812
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  31971741 ctctctggtctagctagctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 31971812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 16199282 - 16199220
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 67  Q
    ||||||| || |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  16199282 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 16199220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 6759762 - 6759827
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  6759762 tcaagcttgctaggcgagttcatctgctcgctatggcgagctgcatggtgcaactcgcgaggcggg 6759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 21918631 - 21918563
Alignment:
Q  8 tctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||| |||| ||||||||||||||||   || | |||||||||||||||||||||||||||||||||||    
T  21918631 tctggtcaatctcgctaggcgagttcaagtgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 21918563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 21286718 - 21286791
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21286718 ctctctggtcacactcgctaggcgagtggatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22627232 - 22627305
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| | |||| | |||||| ||||||   |||||||||||||||||||    
T  22627232 ctctctggtcaagctcgctaggcgagttcatatgctcgatatggcaagctgcagggtgcaactcgcgaggcggg 22627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 6520881 - 6520942
Alignment:
Q  21 gctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    |||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||||||    
T  6520881 gctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcgcgaggcggggaaa 6520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 22526099 - 22526140
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22526099 tctgcttgctatggcgagctgcaacatgcaactcgcgaggcg 22526140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 23649058 - 23649131
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||||||   |||| ||||||||||| ||| || || |||||| |||||| |||||||||    
T  23649058 tcaagctcgctaggcgagttcagttgctcgctatggcgagttgcaacatgtaactcgggaggcgaggaaaggtt 23649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 21389077 - 21389005
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  21389077 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 21389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 26355301 - 26355250
Alignment:
Q  25 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||| |||| |||| |||||||||||||| ||||||||| |||||||    
T  26355301 ggcgagttcatctgtttgccatggcgagctgcgaggtgcaactcacgaggcg 26355250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 17439023 - 17438982
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  17439023 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 17438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 22365266 - 22365307
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22365266 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 22365307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 37116019 - 37115978
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  37116019 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 37115978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 21395601 - 21395529
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||| |||||||||||||||||||||||||||    
T  21395601 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggcg 21395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 21790094 - 21790022
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||| |||||||||||||||||||||||||||    
T  21790094 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggcg 21790022  T

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Target: scaffold0305 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 20900 - 20981
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20900 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaagcggggaaaggtt 20981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 2356 - 2429
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2356 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 339575 - 339498
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  339575 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 339498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 71783 - 71864
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  71783 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 71864  T

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Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 22779851 - 22779770
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22779851 ctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 22779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 17287420 - 17287339
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  17287420 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggggaaaggtt 17287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 20637910 - 20637835
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20637910 tcaagctcactaggcaagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 20637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 27415578 - 27415497
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  27415578 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 27415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 28496097 - 28496024
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  28496097 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcgaggcggg 28496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 29808507 - 29808434
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  29808507 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcgaggcggg 29808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 1645175 - 1645256
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  1645175 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtaacgtgcaactcgcgaggcgaggaaaggtt 1645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18457211 - 18457285
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  18457211 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgtcgtgcaactcgcgaggcggg 18457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 16920257 - 16920197
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||    
T  16920257 agctcgctaggcgagttcatttgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 16920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 1561800 - 1561883
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| |||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||||||||||||| |||||    
T  1561800 ctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcgaggcggggaaaagttac 1561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18409451 - 18409378
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||| || | |||||||||||||   |||||||||||||||||||    
T  18409451 ctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcagggtgcaactcgcgaggcggg 18409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 21939880 - 21939961
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||| || ||||||||||  ||||| ||||||||||||||| | ||||||||||||| ||| |||||||||    
T  21939880 ctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaatgtgcaactcgcgaagcgaggaaaggtt 21939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 22080361 - 22080287
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||||| || |||||| |||| ||||||||||||||||| | |||||||||| ||||||||    
T  22080361 ctctctggtcaagctcgctatggtgagttcatctgtttgctatggcgagctgcaaggtgcaactcgtgaggcggg 22080287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 25628971 - 25628906
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  25628971 tcaaactcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 25628906  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 23019917 - 23019977
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  23019917 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 22832026 - 22832060
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||||||    
T  22832026 gctatggcgagctgcgacgtgcaactcgcgaggcg 22832060  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 19303165 - 19303092
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||| | ||| |||||| |||||| ||||||||||||| | | ||||||||||| |||||||    
T  19303165 ctctctggtcaagctcacgaggtgagttcatctgctcgctatggcgagctccaaggtgcaactcgcaaggcggg 19303092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25956245 - 25956172
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | ||||| |||||||||||||    
T  25956245 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggcggg 25956172  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 19863474 - 19863546
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  19863474 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 19863546  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 15539816 - 15539849
Alignment:
Q  45 atggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||||||||| |||||||||||||||||||    
T  15539816 atggcgagctgcgaggtgcaactcgcgaggcggg 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 18230771 - 18230812
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18230771 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18230812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 18231153 - 18231194
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18231153 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 20224546 - 20224587
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  20224546 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 20224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 22118530 - 22118571
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22118530 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 22118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 20594286 - 20594322
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||| | |||||||||||||||||||    
T  20594286 gctatggcgagctgcaaggtgcaactcgcgaggcggg 20594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 22439296 - 22439368
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||||||||||||||||| |||||||||||||    
T  22439296 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgtaactcgcgaggcg 22439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 23390112 - 23390039
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23390112 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 23390039  T

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Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 25422029 - 25422110
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||| | ||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  25422029 ctctctggtcaagctcgctaggcgagtacatctactcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaaggtt 25422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 21985771 - 21985700
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||    
T  21985771 ctctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcagctctcgaggcg 21985700  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 1096964 - 1097037
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||||||    
T  1096964 ctctctggtcaagctcgctaggcgagtttatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 1097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 20910436 - 20910363
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  20910436 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcggg 20910363  T

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Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 22119817 - 22119736
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||| || ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  22119817 ctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 22119736  T

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Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 24494065 - 24494138
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||||||    
T  24494065 ctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 24494138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 25431891 - 25431972
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||| | ||| || ||||||| |||||||||||||||||||||||||| || |||||||    
T  25431891 ctctctggtcaagctcgctaggcgagtacatctactcgctatggagagctgcgacgtgcaactcgcgaggcaggaaaaggtt 25431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11580869 - 11580795
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  11580869 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggg 11580795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 22075505 - 22075588
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| |||||||| ||||||||||||   || | || |||||||||||| ||||||||||||| |||||||||||||||||    
T  22075505 ctctctggtcaagctcactaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcaaggcggggaaaggttac 22075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 29916637 - 29916699
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  29916637 gctcgctatggcgagttcatttgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 29916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 9078449 - 9078518
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||||||||||||||||||||| |||||| | ||||||||||| | | |||||||||||||||    
T  9078449 ctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctacaaggtgcaactcgcgagg 9078518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 19660461 - 19660380
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| || ||||||||||||||||||   || | || ||||||||||||||||||||||||| ||||||||||| ||||    
T  19660461 ctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgtgaggcggggaagggtt 19660380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 21871187 - 21871114
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||||||| || ||||||    
T  21871187 tcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcgaggcgaggtaaggtt 21871114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 21875467 - 21875394
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||||||| || ||||||    
T  21875467 tcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcgaggcgaggtaaggtt 21875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 21498628 - 21498560
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||| || |||||||    
T  21498628 ctcgctaggcgagttaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcaggtaaaggtt 21498560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22107008 - 22106937
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | | | ||||||||||||||||||| |||||||||||    
T  22107008 ctctctggtctagctcgctaggcgagttcatctgttcgttgtggcgagctgcgacgtgcacctcgcgaggcg 22106937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 24529718 - 24529787
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||||||||||||||||||| | |||||| | |||||||||||||   |||||||||||||||    
T  24529718 ctctctggtcaagctcgctaggcgagtacatctgctcgttatggcgagctgcagggtgcaactcgcgagg 24529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 21329106 - 21329046
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21329106 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 8286457 - 8286422
Alignment:
Q  47 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  8286457 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 8286422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 22144578 - 22144628
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 87  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||| ||||    
T  22144578 tgcttgctatggcgagctgcaaggtgcaactcgcgaggcgggtaaaagtta 22144628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 36154441 - 36154400
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  36154441 tgctcgctatggcgagctgcgacatgcaactcgcgaggcggg 36154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 23201863 - 23201935
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  23201863 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 23201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 24766945 - 24766885
Alignment:
Q  26 gcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||  ||||| |||||||||| |||| ||||||| ||||||||||| |||||||||    
T  24766945 gcgagttcaactgctcgctatggcgaactgcaacgtgcacctcgcgaggcgaggaaaggtt 24766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 14079684 - 14079714
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  14079684 tggcgagctgcgacgtgcaactcgcgaggcg 14079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 5888797 - 5888748
Alignment:
Q  7 ctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 56  Q
    |||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  5888797 ctctgatcacactcgctaggcgagttaatctgctcgctatggcgagctgc 5888748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 26011658 - 26011585
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||| ||||||||    
T  26011658 ctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgtgaggcggg 26011585  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22959157 - 22959085
Alignment:
Q  5 ctctctgatcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| | |||||||  ||| | ||||||||||||||| | |||||||||||||||||    
T  22959157 ctctctggtcatgctcgctatgacgagttcaactgttcgctatggcgagctgcaatgtgcaactcgcgaggcg 22959085  T

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Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 22636931 - 22637012
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  22636931 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggggaaaggtt 22637012  T

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Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 44053326 - 44053407
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  44053326 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 44053407  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 12903242 - 12903325
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12903242 ctctctggtcaagctcgctaggcgagttcatctgatcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 12903325  T

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Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 16239616 - 16239533
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16239616 ctctctggtcaagctcgctaggcgagtacatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 16239533  T

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Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 3097129 - 3097200
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  3097129 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 3097200  T

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Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 7089371 - 7089446
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  7089371 tcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcgaagcggggaaaagttac 7089446  T

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Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 3332315 - 3332396
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||||||| |||||||||    
T  3332315 ctctctgatcaagctcgcgaggcgagttcaactactcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 3332396  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 20156914 - 20156841
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  20156914 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 20156841  T

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Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 24029238 - 24029319
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||| ||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  24029238 ctctctgatcgagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 24029319  T

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Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 15552310 - 15552382
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcc-tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| |||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||    
T  15552310 ctctctggtcaagctcgctaggcgagttcagtctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 15552382  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 12774495 - 12774569
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||| | ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  12774495 ctctctggtcatgctcgcgatggcgagttcatctgtttgctatggcgagctgcgacgtgcaactcgcgaggcggg 12774569  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 44102706 - 44102780
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  44102706 ctctctggtcatgctcgctatggcgagttcatctgctcgctacggcgagctgcgacgtgcaactcgcgaggcggg 44102780  T

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Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 14052938 - 14052869
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||||    
T  14052938 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcgagg 14052869  T

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Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 15091394 - 15091467
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||   ||||| |||||||||||||    
T  15091394 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcacctcgcgaggcggg 15091467  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 17053539 - 17053599
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  17053539 agctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 17053599  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 16377143 - 16377073
Alignment:
Q  8 tctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| |||||||||||||| |||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  16377143 tctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 16377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 44928539 - 44928474
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||||||||| |||| |  |||||||||||||| ||||||||||||| |||||||    
T  44928539 tcaagctcgctaggcgagttcatctgttcactatggcgagctgcaacgtgcaactcgcaaggcggg 44928474  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 7799210 - 7799254
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7799210 gctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 7799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 23374117 - 23374074
Alignment:
Q  45 atggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  23374117 atggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 23374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 6190930 - 6191004
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| || |||||| || ||| |||||| ||||||||||||||||||||||||||||||    
T  6190930 ctctctggtcatgctcgctatggtgagttcatcagctcgctatgacgagctgcgacgtgcaactcgcgaggcggg 6191004  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 21815256 - 21815182
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||| | ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  21815256 ctctctggtcatgctcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggg 21815182  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 39705913 - 39705839
Alignment:
Q  4 cctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  39705913 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 39705839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 21818328 - 21818275
Alignment:
Q  25 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  21818328 ggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggg 21818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 22633837 - 22633756
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||| |||||| ||||||||||  |||||  ||||||| |||||| ||||||||||||||||||| | |||||||    
T  22633837 ctctctggtcaggctcgcgaggcgagttcaactgctcactatggcaagctgcaacgtgcaactcgcgaggcgagaaaaggtt 22633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 43198212 - 43198139
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  43198212 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 43198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 10314244 - 10314283
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10314244 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 10314283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 14039154 - 14039197
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 56  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||    
T  14039154 tcaagctcgctaggcgagttcatctgctcgctatgccgagctgc 14039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16597142 - 16597225
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || ||||||||||||||||||   || | |   ||||||||||| ||||||||||||||||||||| || ||||||    
T  16597142 ctctctggtctagctcgctaggcgagttcaagtgttcgtcgtggcgagctgcaacgtgcaactcgcgaggcgggaaagggttac 16597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 13570048 - 13570078
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  13570048 tggcgagctgcgacgtgcaactcgcgaggcg 13570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 23844015 - 23844045
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  23844015 tggcgagctgcgacgtgcaactcgcgaggcg 23844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 44676168 - 44676198
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  44676168 tggcgagctgcgacgtgcaactcgcgaggcg 44676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 8846889 - 8846922
Alignment:
Q  43 ctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||| |||||||||||||||||    
T  8846889 ctatggcgagctgcgaggtgcaactcgcgaggcg 8846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 53081693 - 53081652
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  53081693 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 53081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 12287726 - 12287686
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  12287726 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 12287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 13845049 - 13845109
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||   |||||| | ||||||||||||| | |||||| ||||||||||||    
T  13845049 ctcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaattcgcgaggcggg 13845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 15121392 - 15121356
Alignment:
Q  40 ttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  15121392 ttgctgtggcgagctgcgacttgcaactcgcgaggcg 15121356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 684 - 600
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttacc 89  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  684 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggggaaaagttacc 600  T

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Target: scaffold0011 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 167614 - 167530
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttacc 89  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  167614 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggggaaaagttacc 167530  T

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Target: scaffold0011; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 52409 - 52490
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| || |||||||||||||||    
T  52409 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacatgcaacttgcaaggcggggaaaggtt 52490  T

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Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 184398 - 184318
Alignment:
Q  6 tctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  184398 tctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggtt 184318  T

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Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 13442749 - 13442832
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  13442749 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcaaggcggggaaaggttac 13442832  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 17499844 - 17499917
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  17499844 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggtt 17499917  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 20698071 - 20697993
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 83  Q
    ||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  20698071 ctctctggtcaagctcgctagacgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcgggaaaag 20697993  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 17488362 - 17488435
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  17488362 tcaagcttgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 17488435  T

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Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 26687384 - 26687457
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  26687384 ctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcgaggcggg 26687457  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 17247911 - 17247837
Alignment:
Q  4 cctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||| |||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  17247911 cctctctggtcaagctcgctaggagagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcggg 17247837  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 11424387 - 11424306
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||| ||||||||    
T  11424387 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggagaaaggtt 11424306  T

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Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 43842675 - 43842756
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||||| | ||||||||||| |||||||||||||||||||    
T  43842675 ctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagttacgacgtgcaacccgcgaggcggggaaaggtt 43842756  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 13209952 - 13209869
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| |||||||||||||||||||||   || | || |||||||||||||||||||||||||||||||||||||| |||||    
T  13209952 ctctctggtcaagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 13209869  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 14179819 - 14179890
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  14179819 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 14179890  T

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Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 53070315 - 53070249
Alignment:
Q  13 tcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  53070315 tcaagctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 53070249  T

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Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14666102 - 14666175
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  14666102 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 14666175  T

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Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14735615 - 14735688
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  14735615 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 14735688  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 23082985 - 23082912
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  23082985 ctctctggtcaagctcgctgggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgcaaggcggg 23082912  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 17247148 - 17247084
Alignment:
Q  14 caagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  17247148 caagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcggg 17247084  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 12933934 - 12933856
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||| |||||    
T  12933934 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcgaggaaa 12933856  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 14973351 - 14973424
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  14973351 ctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 14973424  T

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Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 18439031 - 18439104
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||| || |||||||||||||||   |||||||||||||||||||    
T  18439031 ctctctggtcaagctcgctaggcgagttcatctactcgctatggcgagctgctgggtgcaactcgcgaggcggg 18439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 25476009 - 25475936
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| | ||||||||||||| | || ||||||||||||||||    
T  25476009 ctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctgcaaggtacaactcgcgaggcggg 25475936  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 9513407 - 9513479
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9513407 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9513479  T

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Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 9521382 - 9521454
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9521382 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9521454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 12851980 - 12851908
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 85  Q
    ||||| |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  12851980 tcaagatcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggt 12851908  T

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Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 16809893 - 16809953
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||    
T  16809893 agctcgctaggcgagttcatctattcgctatggcgagctgcgacgtgcaactcgcgaggcg 16809953  T

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Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 4588439 - 4588368
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| |||||||||| ||||||||||  ||||| |||||||||||||||  ||||||||||||||||||    
T  4588439 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcatcgtgcaactcgcgaggcg 4588368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 42386908 - 42386979
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| |||  |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||    
T  42386908 ctctctggtcacactcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 42386979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 30030325 - 30030406
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||||||||||||||  || || ||||||||||| ||| ||| |||||| |||||||||| |||||||    
T  30030325 ctctctggtcaagctcgctaggcgagttcagctactcgctatggcgagttgcaacgcgcaacttgcgaggcgggaaaaggtt 30030406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 1644307 - 1644235
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  1644307 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 1644235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 14669367 - 14669427
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  14669367 ctcgcgaggcgagttcaactactcgctatggcgagctgcgacgtgcaactcgcgaggcggg 14669427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16104277 - 16104351
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||| | || ||||||||| ||||||||||||||||||||||||    
T  16104277 ctctctggtcatgctcgctatggcgagttcatctgttcgcgatggcgagcggcgacgtgcaactcgcgaggcggg 16104351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 40213345 - 40213275
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| |||||||| |||||||||||| |||||| ||||||||||||| | | ||| ||||||||||||    
T  40213345 ctctctggtcaagctcactaggcgagttcatctgctcgctatggcgagctacaaggtgtaactcgcgaggc 40213275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 14235004 - 14235064
Alignment:
Q  22 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  14235004 ctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 14235064  T

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Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 15471434 - 15471497
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 81  Q
    ||||||||||||||   |||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  15471434 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtggaactcgcgaggcggggaa 15471497  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 49389268 - 49389197
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||||||||    
T  49389268 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgatgtgcaactcgcgaggc 49389197  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 12399692 - 12399772
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| || ||||||| ||||||||||   || || | |||||||||||||||||||||||||||| |||||||| ||||    
T  12399692 ctctctggtctagctcgcgaggcgagttcaagtgttttccatggcgagctgcgacgtgcaactcgcga-gcggggaagggtt 12399772  T

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Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 23408967 - 23409003
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23408967 tggcgagctgcgacgtgcaactcgcgaggcgaggaaa 23409003  T

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Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 49667708 - 49667636
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||| |||| |||||||||||| |||||    
T  49667708 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagttgcgtcgtgcaactcgcaaggcg 49667636  T

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Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 32308186 - 32308237
Alignment:
Q  25 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  32308186 ggcgagttcatctattcgctatggcgagctgcgaggtgcaactcgcgaggcg 32308237  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Complemental strand, 17524757 - 17524727
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  17524757 tggcgagctgcgacgtgcaactcgcgaggcg 17524727  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 52523321 - 52523279
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  52523321 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 52523279  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 321596 - 321567
Alignment:
Q  47 ggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||||||||||||||||||||||||    
T  321596 ggcgagctgcgacgtgcaactcgcgaggcg 321567  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 379353 - 379404
Alignment:
Q  124 tagtgtggcttagcaagacgtttaat---aaaaagggcaagattgtcatttc 172  Q
    ||||||||||||||||||| ||||||   |||||||||||||| ||||||||    
T  379353 tagtgtggcttagcaagacttttaataaaaaaaagggcaagatggtcatttc 379404  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 21838035 - 21838076
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  21838035 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 21838076  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 22109903 - 22109830
Alignment:
Q  3 tcctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||| ||| ||| |||||||| ||||||||| |||||| ||||||||||||||| | |  |||||||||||||    
T  22109903 tcctcactggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcaaggaacaactcgcgaggc 22109830  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 12171741 - 12171669
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||| ||| |||||||||  ||| | || |||||||||||||| |||||||||||||||||    
T  12171741 ctctctggtcatgctcactatggcgagttcaactgttcgcaatggcgagctgcgaggtgcaactcgcgaggcg 12171669  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 15877453 - 15877381
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||||||| |||||||||||||||||||||||    
T  15877453 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagttgcgacgtgcaactcgcgaggcg 15877381  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 16097839 - 16097899
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||| ||||||||| || | | ||||||||||||||| | |||||||||||||||||    
T  16097839 gctcgctatggcgagttcatccgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 16097899  T

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Target: scaffold0647 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 5745 - 5662
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  5745 ctctctggtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaagtttac 5662  T

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Target: scaffold0193 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 13697 - 13780
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  13697 ctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcgatgcggggaaaggttac 13780  T

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Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 23076937 - 23077016
Alignment:
Q  7 ctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  23076937 ctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcatctcgcgaggcggggaaaggtt 23077016  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 23654034 - 23653951
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23654034 ctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 23653951  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 23286355 - 23286430
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23286355 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 23286430  T

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Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 23060835 - 23060908
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23060835 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaacccgcgaggtggggaaaggtt 23060908  T

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Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 27754075 - 27754153
Alignment:
Q  8 tctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||| |||||||||||||  |||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  27754075 tctggtcaagctcgctagcagagttcatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaggtt 27754153  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23660519 - 23660592
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  23660519 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28291926 - 28291857
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  28291926 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgagg 28291857  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 32451553 - 32451479
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  32451553 ctctctggtcatgctcgctatggcgagttcatctgcttgctatggcgagctgcgtcgtgcaactcgcgaggcggg 32451479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 20309591 - 20309662
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | | ||||||||||||||| |||||||||||||||||    
T  20309591 ctctctggtctagctcgctaggcgagttcatctgttcgatatggcgagctgcgatgtgcaactcgcgaggcg 20309662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 298439 - 298369
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| |||||||||||| |||||||||  ||||| ||||||||||| |||||||||||||||||||||    
T  298439 ctctctggtcaagctcgctatggcgagttcagctgctcgctatggcgagttgcgacgtgcaactcgcgagg 298369  T

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Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 22730846 - 22730776
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||| ||||| |||||| ||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  22730846 agctcgctaggccagttcatctgctcgctatggcgagctacgatgtgcaactcgcaaggcggggagaggtt 22730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 37740 - 37680
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||| |||| | |||||||||||||||||| ||||||| ||||||||    
T  37740 agctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaacttgcgaggcg 37680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 40621833 - 40621762
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| |||||||||||||||||||||   || | | | |||||||||||||||||||||||||||||||    
T  40621833 ctctctggtcaagctcgctaggcgagttcagttgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 40621762  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 22337620 - 22337685
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||||||||| |||||| |||||||||||||||   ||||| ||| |||||||||    
T  22337620 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcatctcacgaggcggg 22337685  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 22737796 - 22737735
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    |||||||||||| |||||||| |||||| |||| |||||||| ||||||| |||||||||||    
T  22737796 tcaagctcgctacgcgagttcatctgctcgctagggcgagcttcgacgtggaactcgcgagg 22737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 7679792 - 7679866
Alignment:
Q  4 cctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||| |||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  7679792 cctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgcgaggcggg 7679866  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 23038541 - 23038599
Alignment:
Q  17 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||||||||||| | |||||| | | ||||||||||| ||||||||||||||||||    
T  23038541 gctcgctaggcgagtacatctgctcgttgtggcgagctgcaacgtgcaactcgcgaggc 23038599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22133841 - 22133769
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | |||| | |||||||||||||||||||||| |||||    
T  22133841 ctctctggtcatgctcgctatggcgagttcatctgttcgctacgacgagctgcgacgtgcaactcgcaaggcg 22133769  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22740585 - 22740513
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  22740585 ctctctggtcatgctcgctatggcgagttcggttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 22740513  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 24658145 - 24658213
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaagg 84  Q
    ||||||||||||||||||  ||| | |   ||||||||||| |||||||||| ||||||||||||||||    
T  24658145 agctcgctaggcgagttcaactgttcgtcgtggcgagctgcaacgtgcaacttgcgaggcggggaaagg 24658213  T

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Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Complemental strand, 22758298 - 22758268
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  22758298 tggcgagctgcgacgtgcaactcgcgaggcg 22758268  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 20519711 - 20519670
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 77  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  20519711 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 20519670  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 22798709 - 22798680
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||||||||||||||||||||||||||    
T  22798709 tggcgagctgcgacgtgcaactcgcgaggc 22798680  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 22412648 - 22412612
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||| | |||||||||||||||||||    
T  22412648 gctatggcgagctgcaaggtgcaactcgcgaggcggg 22412612  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23705890 - 23705830
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||| |||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  23705890 ctcgataggcgagtgaatctgctcgttatggcgagctgcaaagtgcaactcgcgaggcggg 23705830  T

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Target: scaffold0056 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 16839 - 16761
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 83  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16839 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaag 16761  T

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Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 78986 - 78905
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| || ||||||| ||||||||||   || | || |||| ||||||| ||||||||||||||| |||||||||||||    
T  78986 ctctctggtctagctcgcgaggcgagttcaagtgttcgccatggggagctgcaacgtgcaactcgcgatgcggggaaaggtt 78905  T

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Target: scaffold0540 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 637 - 556
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  637 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcaaggtggggaaaggtt 556  T

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Target: scaffold0122 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 25681 - 25608
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25681 tcaagctcgctaggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 25608  T

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Target: scaffold0122; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 33118 - 33048
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  33118 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggc 33048  T

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Target: scaffold0080 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 40408 - 40481
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  40408 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 40481  T

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Target: scaffold0413 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 15239 - 15161
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 83  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  15239 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtacaactcgcgaggcgggtaaag 15161  T

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Target: scaffold0839 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 1702 - 1621
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||||    
T  1702 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcgggaaaaggtt 1621  T

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Target: scaffold0352 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17632 - 17559
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  17632 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggg 17559  T

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Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 20050 - 19969
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  20050 ctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcgacatgcaactcgcgaggcgaggaaaggtt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 65418 - 65346
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  65418 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 65346  T

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Target: scaffold0021 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 125079 - 125160
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| | ||||||||||||||||    
T  125079 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaacttgtgaggcggggaaaggtt 125160  T

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Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 63058 - 63130
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||||||||||    
T  63058 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 63130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 175261 - 175333
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  175261 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 175333  T

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Target: scaffold0389 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 13232 - 13150
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 87  Q
    ||||||| |||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  13232 ctctctggtcaagctcgctaggagagttcatctgctcgctgtggcgagctgcgacgtgcaactcacgaggcggggaaaagtta 13150  T

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Target: scaffold0358 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 422 - 492
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  422 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggc 492  T

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Target: scaffold0358; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 5198 - 5268
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  5198 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggc 5268  T

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Target: scaffold2044 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 1072 - 999
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  1072 tcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacgaggcggggaaaggtt 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 6444 - 6371
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| | ||||||    
T  6444 tcaagctcgctaggcgagttcatctgctcgctatggcgaggtgcgacgtgcaactcgcgaggcggagcaaggtt 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 5013 - 5082
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  5013 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 5082  T

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Target: scaffold0228; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12595 - 12664
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  12595 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 22547 - 22616
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  22547 tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13597 - 13670
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  13597 tcaagctcgctaggcgagttcatctgctcgctattgcgagctgcgatgtgcaactcgcgaggcgggggaaggtt 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 34617 - 34688
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||    
T  34617 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 24274 - 24193
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  24274 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 21395 - 21464
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||||||||||    
T  21395 tcaagctcgctaggcgagttcatctcctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaa 21464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 10655 - 10732
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  10655 ctctctggtcaagctcgctaggcaagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 39555 - 39474
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| |||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  39555 ctctctggtcaagctcgcgaggcgagttcatctgctcgctatggcgagctgcatcgtgctactcgcgaggcggggaaaggtt 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 40353 - 40422
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| |||||||| |||||||||| | |||||| |||||||| ||||||   |||||||||||||||    
T  40353 ctctctggtcaagctcactaggcgagtacatctgctcgctatggctagctgcagggtgcaactcgcgagg 40422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 289 - 373
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  289 ctctctggtcatgctcgctatggcgagttcatctgctcgctaaggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 373  T

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Target: scaffold0718 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 4766 - 4695
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  4766 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 4695  T

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Target: scaffold0351 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 16765 - 16836
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  16765 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 16836  T

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Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 16881 - 16911
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  16881 tggcgagctgcgacgtgcaactcgcgaggcg 16911  T

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Target: scaffold0151 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 10641 - 10711
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  10641 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggc 10711  T

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Target: scaffold0627 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 401 - 474
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  401 ctctctggtcaagctcgctaggggagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 474  T

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Target: scaffold0364 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 17244 - 17171
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  17244 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 17171  T

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Target: scaffold0266 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 18582 - 18509
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||||||||| ||||| |||||||||||||||    
T  18582 ctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcaacgtgaaactcgcgaggcggg 18509  T

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Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 5020 - 5093
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  5020 ctctctggtcaagatcgctaggcgagttcatctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 5093  T

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Target: scaffold0598 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 687 - 616
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| | || ||||||||||||||||||||||||||||| |||||||    
T  687 ctctctggtctagctcgctaggcgagttcatatgtttgctatggcgagctgcgacgtgcaactcacgaggcg 616  T

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Target: scaffold0490 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 2438 - 2521
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || |||||||||||||||||| |||||| ||||||||||| ||||| |||  |||||||||||||| |||||||||    
T  2438 ctctctggtctagctcgctaggcgagttcatctgctcgctatggcgagttgcgaggtgttactcgcgaggcgggaaaaggttac 2521  T

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Target: scaffold0456 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 10061 - 9990
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  10061 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 9990  T

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Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 14974 - 15057
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || ||||||||||||||||||   || |||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  14974 ctctctggtctagctcgctaggcgagttcaagtgtttgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 15057  T

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Target: scaffold0142 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 17277 - 17351
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  17277 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggg 17351  T

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Target: scaffold0042 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 23918 - 23856
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  23918 tcaagcttgctaggcgagttcatccgctcgctatggcgagctgcgacgtgcaactcgcgaggc 23856  T

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Target: scaffold0876 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 2709 - 2636
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| ||||||  |||||||||||||| | |||||||||| ||||||||    
T  2709 ctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcaaggtgcaactcgtgaggcggg 2636  T

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Target: scaffold0395 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 586 - 513
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||| ||||   |||||||||||||||||||    
T  586 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgacctgcagggtgcaactcgcgaggcggg 513  T

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Target: scaffold0395; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 8083 - 8044
Alignment:
Q  37 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  8083 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 8044  T

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Target: scaffold0347 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 524 - 605
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||  | |||||||||    
T  524 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgagaagaggaaaggtt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16155 - 16238
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| || ||||||||||||||||||   || | || |||||||||||| ||||||||||||||||||||||||| |||||    
T  16155 ctctctggtctagctcgctaggcgagttcaattgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 16238  T

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Target: scaffold0064 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 47472 - 47543
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| | || | ||||||||||||||| |||||||||||||||||||    
T  47472 ctctctggtctagctcgctaggcgagttcatttgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 47543  T

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Target: scaffold0628 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 2427 - 2353
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 79  Q
    ||||||| |||  |||||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||    
T  2427 ctctctggtcatactcgctaggcgaattcatctgttcgcaatggcgagctgcgacgtgcaactcgcgaggcgggg 2353  T

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Target: scaffold0427 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 13981 - 14051
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| || |||||||||||| ||||| |||| | |||||||||||||||||| |||||||||||||||    
T  13981 ctctctggtctagctcgctaggcaagttcatctgttcgctatggcgagctgcgacatgcaactcgcgaggc 14051  T

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Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 46422 - 46500
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 83  Q
    ||||||| ||||| |||| |||||||||| |||||| ||||||||||||||| | || |||||||||||||||| ||||    
T  46422 ctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcgggtaaag 46500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 32583 - 32510
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  32583 ctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 32510  T

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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 19308 - 19370
Alignment:
Q  24 aggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  19308 aggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 19370  T

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Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 8149 - 8076
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||| || ||||||  |||||||||||||||| |||||||| |||||| ||| |||||||    
T  8149 tcaagctcgctaggcgagctcatctgctccctatggcgagctgcgatgtgcaacttgcgaggtgggaaaaggtt 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 20609 - 20682
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||||||||||||||||||||| || ||| |||||||||||||||   ||||||||| |||||||||    
T  20609 ctctctggtcaagctcgctaggcgagttcatccgctcgctatggcgagctgcagggtgcaactcacgaggcggg 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 79956 - 79887
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| |||||||||| ||||||||||  || || ||||||||||||||| |||||||||||||||||    
T  79956 ctctctggtcaagctcgcgaggcgagttcaacttctcgctatggcgagctgcaacgtgcaactcgcgagg 79887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 28433 - 28361
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  28433 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 28361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 1913 - 1854
Alignment:
Q  17 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||||||||||| |||  | ||||||||||||| |||||||||||||||||||||    
T  1913 gctcgctaggcgagttcatctattcgctatggcgagctacgacgtgcaactcgcgaggcg 1854  T

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Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 10896 - 10825
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| |||| | |||||||||||||||||| ||||| |||| |||||    
T  10896 ctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacttgcaattcgcaaggcg 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 15100 - 15029
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||||||||||||| || | | || |||| |||||||||||||||||||||||||||    
T  15100 ctctctggtccagctcgctaggcgagttcatcagttcgcgatggtgagctgcgacgtgcaactcgcgaggcg 15029  T

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Target: scaffold0114; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 32900 - 32829
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| || |||||||| ||||||||| || | | |  ||||| ||||||||||||||||||||||||||    
T  32900 ctctctggtctagctcgcttggcgagttcatcagttcgagatggctagctgcgacgtgcaactcgcgaggcg 32829  T

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Target: scaffold0810 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3429 - 3503
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| ||||||||||| ||||| ||||||||||| |||||||    
T  3429 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagttgcgaggtgcaactcgcaaggcggg 3503  T

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Target: scaffold0639 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 8972 - 9022
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctg 55  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  8972 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctg 9022  T

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Target: scaffold0503 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 12425 - 12499
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||||| ||||||||| |||||| ||||||||| |||||||||||||||||  ||||||||    
T  12425 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgggctgcgacgtgcaactcatgaggcggg 12499  T

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Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 36005 - 35935
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||| | |||||| ||| ||||||||||| | ||||||||||||||||| || ||||||    
T  36005 agctcgctaggcgagtacatctgctcgctgtggcgagctgcaaagtgcaactcgcgaggcgagggaaggtt 35935  T

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Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 32591 - 32633
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  32591 tggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 1 - 55
Alignment:
Q  22 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||||||||||    
T  1 ctaggcgagatcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 55  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 16215 - 16150
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||| ||||| |||||| |||||||||| |||| | || ||||||||||||||||    
T  16215 tcaagctcgctaggcaagttcatctgctcgctatggcgatctgcaaggtacaactcgcgaggcggg 16150  T

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Target: scaffold0145 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 39293 - 39330
Alignment:
Q  52 gctgcgacgtgcaactcgcgaggcggggaaaggttacc 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39293 gctgcgacgtgcaactcgcgaggcggggaaaggttacc 39330  T

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Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 13437 - 13510
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||| ||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  13437 ctctctaatcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 13510  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 15046 - 14981
Alignment:
Q  13 tcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    |||||||||| || |||||||  ||||| |||||||| |||||| |||||||||||||||||||||    
T  15046 tcaagctcgcgagacgagttcaactgctcgctatggcaagctgcaacgtgcaactcgcgaggcggg 14981  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 2268 - 2196
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||||||||||    
T  2268 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 2196  T

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Target: scaffold0161 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 2058 - 1986
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||||||||||   || | ||  |||| |||||| |||||||||||||||||||||||||||||||    
T  2058 agctcgctaggcgagttcaagtgttcgccgtggcaagctgcaacgtgcaactcgcgaggcggggaaaggttac 1986  T

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Target: scaffold0555 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 10171 - 10108
Alignment:
Q  25 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||| |||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  10171 ggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcgaggaaaagttac 10108  T

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Target: scaffold0555; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 1076 - 1146
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 75  Q
    ||||||| ||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||||||||||||||    
T  1076 ctctctggtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcaactcgcgaggc 1146  T

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Target: scaffold0621 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 7033 - 7103
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||||||||||||  |||||||||||||||    
T  7033 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcggggtgcaactcgcgagg 7103  T

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Target: scaffold0346 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 17337 - 17267
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||||||||||||||||  |  | || |||||||||||| |||||||||||||||| ||||||| ||||    
T  17337 agctcgctaggcgagttccagttttcgccatggcgagctgcaacgtgcaactcgcgagacggggaagggtt 17267  T

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Target: scaffold0218 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 28863 - 28821
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  28863 tggcgagctgcaacgtgcacctcgcgaggcggggaaaggttac 28821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 7633 - 7572
Alignment:
Q  17 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||| ||||| |||||| ||||||||||||| |   |||||||||||||||||||    
T  7633 gctcgctaggcaagttcatctgctcgctatggcgagctacatggtgcaactcgcgaggcggg 7572  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 51508 - 51438
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||| |||||||| |||||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  51508 ctctctggtcatgctcgctatggcgagttcagctgctcgctatcgtgagctgcgacgtgcaactcgcgagg 51438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 33063 - 33105
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  33063 ctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 33105  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 101891 - 101965
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||| ||| ||||||||| || | | ||||||||| |||||||||||||||||||||||||||    
T  101891 ctctctggtcatgctcactatggcgagttcatcagttcgctatggcgtgctgcgacgtgcaactcgcgaggcggg 101965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 1923 - 1850
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| |||  ||||||||||||||   |||||| |||||||||| |||| | |||||||||||||||||||    
T  1923 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgaactgcaaggtgcaactcgcgaggcggg 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7096 - 7168
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| || ||||||||||||||||||  ||||| ||||||||||| ||||| |||  ||||||||||||||    
T  7096 ctctctggtctagctcgctaggcgagttca-ctgctcgctatggcgagttgcgaggtgttactcgcgaggcggg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 12433 - 12360
Alignment:
Q  5 ctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||| ||| |||||| ||||||||||  || || ||||||||||| ||||||||| | |||||||||||||    
T  12433 ctctctggtcaggctcgcgaggcgagttcaactactcgctatggcgagttgcgacgtgaagctcgcgaggcggg 12360  T

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Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10419 - 10488
Alignment:
Q  17 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    |||||| ||||||||||  || || |||||||| |||||| |||||||||||| |||||| |||||||||    
T  10419 gctcgcgaggcgagttcaactactcgctatggcaagctgcaacgtgcaactcgtgaggcgaggaaaggtt 10488  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 80863 - 80904
Alignment:
Q  35 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  80863 tctgcttgctatggcgagctgcaaggtgcaactcgcgaggcg 80904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 7668 - 7608
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||   ||||||  |||||||||||||||| ||||||||| |||||||||    
T  7668 ctcgctaggcgagtgaatctgctccctatggcgagctgcgaggtgcaactcacgaggcggg 7608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 8297 - 8369
Alignment:
Q  4 cctctctgatcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||| |||  ||||||||||||||   |||||| ||||||||||||||| | || ||||||||||||||    
T  8297 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtccaactcgcgaggcg 8369  T

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Target: scaffold0403 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 5345 - 5417
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 88  Q
    ||||||| ||||||||||   || | || ||||||||||||  ||||||||||||||||| ||||||||||||    
T  5345 agctcgcaaggcgagttcaagtgttcgccatggcgagctgcaccgtgcaactcgcgaggctgggaaaggttac 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 9442 - 9382
Alignment:
Q  26 gcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 86  Q
    ||||||||  ||||| |||||||||| |||| ||||||| ||||||||||| |||||||||    
T  9442 gcgagttcaactgctcgctatggcgaactgcaacgtgcacctcgcgaggcgaggaaaggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1784 - 1844
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||| |||||||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  1784 gctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 7761 - 7821
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||| |||||||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  7761 gctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 7821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16144 - 16213
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 73  Q
    ||||||| ||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||||||    
T  16144 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgag 16213  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 19801 - 19837
Alignment:
Q  42 gctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19801 gctatggcgagctgcgaggtgcaactcgcgaggcggg 19837  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11038 - 11098
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||||||||||||   |||||| ||||||||||||||| | ||||||||||| |||||||    
T  11038 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcaaggcggg 11098  T

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Target: scaffold0273 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 9049 - 8986
Alignment:
Q  18 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 81  Q
    |||||||||||| |   |||||| ||||||||||||||| | |||||||| |||||||||||||    
T  9049 ctcgctaggcgactgaatctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggggaa 8986  T

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Target: scaffold0556 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 7308 - 7378
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 74  Q
    ||||||| ||| |||||||| ||||||||| |||| | ||||||| ||||||| | |||||||||||||||    
T  7308 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggagagctgcaaggtgcaactcgcgagg 7378  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Complemental strand, 21389 - 21359
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  21389 tggcgagctgcgacgtgcaactcgcgaggcg 21359  T

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Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Complemental strand, 29281 - 29251
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  29281 tggcgagctgcgacgtgcaactcgcgaggcg 29251  T

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Target: scaffold0131 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 36993 - 37023
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  36993 tggcgagctgcgacgtgcaactcgcgaggcg 37023  T

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Target: scaffold0101 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Complemental strand, 8540 - 8510
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  8540 tggcgagctgcgacgtgcaactcgcgaggcg 8510  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 103178 - 103136
Alignment:
Q  36 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 78  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  103178 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 103136  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 76
Target Start/End: Original strand, 70332 - 70362
Alignment:
Q  46 tggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||||||||||||||||||    
T  70332 tggcgagctgcgacgtgcaactcgcgaggcg 70362  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 161182 - 161260
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 82  Q
    ||||||| ||| |||||||| ||||||||| |||| | |||||||||||||||   |||||||| |||||||| |||||    
T  161182 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcatggtgcaactagcgaggcgaggaaa 161260  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 130404 - 130469
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 69  Q
    ||||||| ||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||    
T  130404 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgaggtgcaactcg 130469  T

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Target: scaffold0324 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 15895 - 15967
Alignment:
Q  5 ctctctgatcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||| ||||||||||||||    
T  15895 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgttcaactcgcgaggcg 15967  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 52076 - 52136
Alignment:
Q  17 gctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||| |||||| || |||| | |||||||||| |||||||||||||||||| |||||    
T  52076 gctcgctatggcgagctcatctgttcgctatggcgatctgcgacgtgcaactcgctaggcg 52136  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 179157 - 179217
Alignment:
Q  16 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 76  Q
    |||||||||||||||| |   || | ||| |||||||||||| ||||||||||||||||||    
T  179157 agctcgctaggcgagtacaattgttcgctgtggcgagctgcgtcgtgcaactcgcgaggcg 179217  T

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