View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3376_low_75 (Length: 282)
Name: NF3376_low_75
Description: NF3376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3376_low_75 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 2428295 - 2428563
Alignment:
| Q |
1 |
aaaaacagagcaaggtcatgcaaaacatgatttgtagtttgaaaaaattaatgttaaaaatataaaagaataagactttgcaacaagatagacaaagata |
100 |
Q |
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| T |
2428295 |
aaaaacagagcaaggtcatgcaaaacatgatttgtagtttgaaaaaattaatgttaaaaatataaaagaatgagactttgcaacaagatagacaaagata |
2428394 |
T |
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| Q |
101 |
tacgtacaaactcacctttatgttgtttgtactttgtttcacatggtgaaatctgattcagcagaagttgaagtgttacctaactggagaaattcaatga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
2428395 |
tacgtacaaactcacctttatgttgtttgtactttgtttcacatggtgaaatctgattcagcagaagttgaagtgttacctaattggagaaattcaatga |
2428494 |
T |
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| Q |
201 |
gaaaaatatatat-aaaattgtgtgagaagaagaaaagaacatgtcagcgacttgtgtttgtttgtttt |
268 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2428495 |
gaaaaatatatataaaaattgtgtgagaagaagaaaagaacatgtcagcgacttgtgtttgtttgtttt |
2428563 |
T |
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