View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3377_low_10 (Length: 243)

Name: NF3377_low_10
Description: NF3377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3377_low_10
NF3377_low_10
[»] chr7 (35 HSPs)
chr7 (14-178)||(1553167-1553329)
chr7 (79-171)||(1537580-1537677)
chr7 (182-226)||(1545569-1545613)
chr7 (1-64)||(10901707-10901770)
chr7 (6-56)||(21402778-21402828)
chr7 (6-52)||(26801679-26801725)
chr7 (1-58)||(18503425-18503482)
chr7 (1-54)||(21066958-21067010)
chr7 (9-58)||(32047157-32047206)
chr7 (6-58)||(10244839-10244891)
chr7 (6-58)||(43119382-43119434)
chr7 (1-52)||(4960858-4960909)
chr7 (182-225)||(12469043-12469086)
chr7 (1-52)||(21762837-21762888)
chr7 (1-52)||(31026293-31026344)
chr7 (1-52)||(32619424-32619475)
chr7 (16-59)||(33590515-33590558)
chr7 (1-52)||(43324636-43324686)
chr7 (6-52)||(3062848-3062894)
chr7 (6-52)||(12640539-12640585)
chr7 (8-58)||(13702093-13702143)
chr7 (6-52)||(24508900-24508946)
chr7 (6-52)||(24781104-24781150)
chr7 (6-52)||(29617479-29617525)
chr7 (6-52)||(35645673-35645719)
chr7 (6-52)||(35950202-35950248)
chr7 (8-58)||(46758310-46758360)
chr7 (1-47)||(47255035-47255081)
chr7 (1-58)||(34267496-34267553)
chr7 (15-64)||(43404933-43404982)
chr7 (9-53)||(11453635-11453679)
chr7 (6-58)||(11692458-11692510)
chr7 (6-58)||(12364817-12364868)
chr7 (6-54)||(20421709-20421757)
chr7 (27-59)||(36803389-36803421)
[»] chr5 (32 HSPs)
chr5 (1-58)||(6167280-6167337)
chr5 (8-58)||(3741022-3741072)
chr5 (8-58)||(8241118-8241168)
chr5 (6-52)||(14641059-14641105)
chr5 (1-58)||(9125730-9125786)
chr5 (1-58)||(10905081-10905138)
chr5 (1-58)||(29691425-29691482)
chr5 (1-58)||(35515580-35515637)
chr5 (1-49)||(2148633-2148681)
chr5 (8-52)||(3821373-3821417)
chr5 (6-58)||(18597477-18597528)
chr5 (1-52)||(9835107-9835158)
chr5 (1-52)||(21749323-21749374)
chr5 (1-52)||(25648029-25648080)
chr5 (9-52)||(27241715-27241757)
chr5 (13-52)||(38097347-38097386)
chr5 (1-59)||(885103-885161)
chr5 (6-52)||(4745826-4745872)
chr5 (6-44)||(7913216-7913254)
chr5 (6-52)||(8968823-8968869)
chr5 (6-52)||(11795567-11795613)
chr5 (6-52)||(12463830-12463876)
chr5 (6-52)||(25400317-25400363)
chr5 (6-52)||(27765331-27765377)
chr5 (13-58)||(6734696-6734741)
chr5 (6-51)||(10804179-10804224)
chr5 (1-58)||(15241464-15241521)
chr5 (21-58)||(16720571-16720608)
chr5 (6-58)||(2848281-2848333)
chr5 (1-49)||(10404204-10404252)
chr5 (10-58)||(11535658-11535705)
chr5 (6-58)||(16789138-16789190)
[»] chr8 (55 HSPs)
chr8 (6-58)||(5328517-5328569)
chr8 (1-64)||(36359028-36359091)
chr8 (6-64)||(21548447-21548505)
chr8 (6-51)||(43875200-43875245)
chr8 (6-58)||(10761887-10761939)
chr8 (7-58)||(3912115-3912166)
chr8 (1-64)||(17072508-17072571)
chr8 (1-64)||(17575700-17575763)
chr8 (6-52)||(9735777-9735823)
chr8 (6-64)||(13059127-13059185)
chr8 (8-58)||(31024362-31024412)
chr8 (8-58)||(36035131-36035181)
chr8 (8-58)||(44053392-44053442)
chr8 (1-58)||(17027826-17027883)
chr8 (1-58)||(17558262-17558319)
chr8 (13-58)||(40904599-40904644)
chr8 (6-58)||(10568153-10568205)
chr8 (1-49)||(26567193-26567241)
chr8 (1-49)||(31211413-31211461)
chr8 (6-58)||(33473305-33473357)
chr8 (6-58)||(34894437-34894489)
chr8 (6-58)||(37290990-37291042)
chr8 (8-52)||(37708765-37708809)
chr8 (1-52)||(7816477-7816528)
chr8 (1-64)||(11236870-11236932)
chr8 (1-52)||(29514700-29514751)
chr8 (1-52)||(31450902-31450953)
chr8 (1-52)||(34266086-34266137)
chr8 (6-52)||(257613-257659)
chr8 (6-52)||(658261-658307)
chr8 (6-52)||(843997-844043)
chr8 (6-52)||(2787031-2787077)
chr8 (6-52)||(9187173-9187219)
chr8 (6-52)||(10736824-10736870)
chr8 (6-52)||(17698596-17698642)
chr8 (6-52)||(23178841-23178887)
chr8 (6-52)||(28909539-28909585)
chr8 (6-52)||(37717437-37717483)
chr8 (5-58)||(38107422-38107476)
chr8 (6-52)||(38219518-38219564)
chr8 (6-52)||(39587621-39587667)
chr8 (6-52)||(43186927-43186973)
chr8 (6-39)||(2908042-2908075)
chr8 (3-52)||(5038632-5038681)
chr8 (1-58)||(5962860-5962917)
chr8 (1-58)||(7763884-7763941)
chr8 (1-58)||(8034357-8034414)
chr8 (1-58)||(21133075-21133132)
chr8 (1-58)||(31712617-31712673)
chr8 (9-58)||(33810708-33810757)
chr8 (13-58)||(34873154-34873199)
chr8 (6-58)||(17499040-17499092)
chr8 (6-58)||(29260687-29260739)
chr8 (6-58)||(31152969-31153021)
chr8 (1-49)||(33838401-33838449)
[»] chr2 (33 HSPs)
chr2 (1-52)||(18862326-18862377)
chr2 (8-64)||(15939351-15939407)
chr2 (6-58)||(17777113-17777165)
chr2 (1-51)||(32854607-32854657)
chr2 (1-58)||(1844885-1844942)
chr2 (1-58)||(18254657-18254714)
chr2 (6-58)||(25067282-25067334)
chr2 (6-58)||(33228883-33228935)
chr2 (6-58)||(38400382-38400434)
chr2 (6-52)||(1309076-1309122)
chr2 (6-52)||(4562702-4562748)
chr2 (8-58)||(5947934-5947984)
chr2 (6-52)||(6331635-6331681)
chr2 (1-51)||(10679321-10679371)
chr2 (6-52)||(17499023-17499069)
chr2 (6-52)||(18694859-18694905)
chr2 (6-52)||(20296492-20296538)
chr2 (8-58)||(20497147-20497197)
chr2 (6-52)||(34125819-34125865)
chr2 (6-52)||(40535399-40535445)
chr2 (6-52)||(41509590-41509636)
chr2 (1-58)||(4878277-4878333)
chr2 (1-58)||(17078525-17078582)
chr2 (3-52)||(25857242-25857291)
chr2 (1-58)||(28153087-28153144)
chr2 (9-58)||(28194700-28194749)
chr2 (17-58)||(44898443-44898484)
chr2 (6-50)||(1260260-1260304)
chr2 (8-52)||(14518358-14518402)
chr2 (6-54)||(25622209-25622257)
chr2 (6-54)||(26307690-26307738)
chr2 (6-58)||(40473500-40473552)
chr2 (1-41)||(44822509-44822549)
[»] chr4 (50 HSPs)
chr4 (8-58)||(30305867-30305917)
chr4 (1-58)||(10402509-10402566)
chr4 (8-52)||(47929319-47929363)
chr4 (1-52)||(26919413-26919464)
chr4 (6-52)||(6371188-6371234)
chr4 (6-64)||(35851653-35851710)
chr4 (8-58)||(36099135-36099185)
chr4 (20-58)||(46933415-46933453)
chr4 (1-58)||(13264219-13264276)
chr4 (1-58)||(40051690-40051747)
chr4 (7-52)||(40486515-40486559)
chr4 (1-58)||(52731384-52731441)
chr4 (6-58)||(2222607-2222659)
chr4 (6-58)||(3036005-3036057)
chr4 (6-58)||(33933689-33933741)
chr4 (10-58)||(41137874-41137922)
chr4 (1-64)||(624542-624605)
chr4 (1-52)||(5304955-5305006)
chr4 (1-52)||(10406974-10407025)
chr4 (1-52)||(12581973-12582024)
chr4 (182-225)||(16647168-16647211)
chr4 (1-52)||(49757229-49757280)
chr4 (1-52)||(55536453-55536504)
chr4 (1-52)||(55853053-55853104)
chr4 (6-52)||(10141057-10141103)
chr4 (7-45)||(13161827-13161865)
chr4 (13-59)||(39489853-39489899)
chr4 (6-52)||(40994053-40994099)
chr4 (6-52)||(43147334-43147380)
chr4 (6-52)||(43596969-43597015)
chr4 (6-52)||(46774980-46775026)
chr4 (6-52)||(48950858-48950904)
chr4 (6-52)||(51791326-51791372)
chr4 (6-52)||(53634201-53634247)
chr4 (8-58)||(54534894-54534944)
chr4 (3-52)||(1457965-1458014)
chr4 (1-58)||(11375835-11375891)
chr4 (9-58)||(19654914-19654962)
chr4 (8-49)||(23142705-23142746)
chr4 (8-49)||(23176674-23176715)
chr4 (1-58)||(35465503-35465560)
chr4 (1-58)||(42381058-42381115)
chr4 (6-58)||(2688164-2688215)
chr4 (13-57)||(4513397-4513441)
chr4 (23-59)||(5803543-5803579)
chr4 (6-58)||(30057290-30057342)
chr4 (6-58)||(32339392-32339444)
chr4 (6-58)||(43271667-43271719)
chr4 (6-50)||(49901558-49901602)
chr4 (6-58)||(55021622-55021674)
[»] chr3 (63 HSPs)
chr3 (8-58)||(41710651-41710701)
chr3 (1-58)||(25883933-25883990)
chr3 (6-58)||(5641564-5641616)
chr3 (1-53)||(9219843-9219895)
chr3 (1-64)||(19879263-19879326)
chr3 (8-58)||(15085636-15085686)
chr3 (8-58)||(27329884-27329934)
chr3 (8-58)||(51879163-51879213)
chr3 (1-58)||(9114079-9114136)
chr3 (1-58)||(50675687-50675744)
chr3 (6-58)||(39720003-39720055)
chr3 (6-58)||(40739161-40739213)
chr3 (8-64)||(41253701-41253757)
chr3 (6-58)||(41936357-41936409)
chr3 (8-52)||(46767417-46767461)
chr3 (6-58)||(53432687-53432739)
chr3 (1-52)||(11206064-11206115)
chr3 (1-52)||(45701418-45701469)
chr3 (7-58)||(49443375-49443425)
chr3 (7-54)||(51233639-51233685)
chr3 (6-52)||(2523000-2523046)
chr3 (6-52)||(4139074-4139120)
chr3 (6-52)||(6919913-6919959)
chr3 (6-52)||(7270029-7270075)
chr3 (1-51)||(7920395-7920445)
chr3 (6-52)||(8964726-8964772)
chr3 (6-52)||(10482803-10482849)
chr3 (6-52)||(15975226-15975272)
chr3 (6-52)||(16231842-16231888)
chr3 (6-52)||(18194412-18194458)
chr3 (6-52)||(30555177-30555223)
chr3 (6-52)||(31327451-31327497)
chr3 (6-52)||(33706677-33706723)
chr3 (8-54)||(36478140-36478186)
chr3 (6-52)||(37488410-37488456)
chr3 (6-52)||(37800561-37800607)
chr3 (6-52)||(40933781-40933827)
chr3 (8-58)||(44625177-44625227)
chr3 (6-52)||(48251646-48251692)
chr3 (6-52)||(50496764-50496810)
chr3 (6-59)||(4807995-4808048)
chr3 (7-64)||(5173962-5174018)
chr3 (13-58)||(8488495-8488540)
chr3 (1-46)||(21324690-21324735)
chr3 (6-59)||(24430216-24430269)
chr3 (9-58)||(28951784-28951832)
chr3 (1-58)||(34102556-34102613)
chr3 (13-58)||(49750364-49750408)
chr3 (1-58)||(53906447-53906504)
chr3 (6-54)||(3748552-3748600)
chr3 (6-58)||(14795179-14795231)
chr3 (8-64)||(23653169-23653224)
chr3 (6-58)||(32023482-32023534)
chr3 (6-58)||(32429815-32429867)
chr3 (6-54)||(33603885-33603933)
chr3 (6-58)||(34757584-34757636)
chr3 (12-52)||(39709112-39709152)
chr3 (8-52)||(45551761-45551805)
chr3 (6-58)||(48739694-48739746)
chr3 (8-52)||(50234198-50234242)
chr3 (6-58)||(53163662-53163714)
chr3 (8-52)||(53578029-53578073)
chr3 (182-225)||(53589052-53589096)
[»] chr1 (40 HSPs)
chr1 (1-58)||(50103929-50103986)
chr1 (6-53)||(17776913-17776960)
chr1 (1-58)||(12048069-12048126)
chr1 (1-58)||(12650329-12650386)
chr1 (9-58)||(27579427-27579476)
chr1 (1-58)||(28564290-28564347)
chr1 (6-58)||(7191100-7191152)
chr1 (6-58)||(21265724-21265776)
chr1 (6-58)||(48638600-48638652)
chr1 (1-52)||(1151833-1151884)
chr1 (1-52)||(2277828-2277879)
chr1 (1-52)||(4482543-4482594)
chr1 (1-52)||(6702650-6702701)
chr1 (1-64)||(8741535-8741598)
chr1 (1-52)||(8984451-8984502)
chr1 (1-52)||(13773242-13773293)
chr1 (1-52)||(18101522-18101573)
chr1 (9-44)||(29527195-29527230)
chr1 (6-52)||(1570142-1570188)
chr1 (6-52)||(6438014-6438060)
chr1 (6-52)||(12502204-12502250)
chr1 (6-52)||(15819551-15819597)
chr1 (8-58)||(18512527-18512577)
chr1 (6-52)||(18534075-18534121)
chr1 (6-52)||(27818642-27818688)
chr1 (6-52)||(32594325-32594371)
chr1 (6-52)||(32970751-32970797)
chr1 (6-52)||(40519493-40519539)
chr1 (6-52)||(47930621-47930667)
chr1 (1-58)||(1247323-1247379)
chr1 (1-58)||(7180559-7180616)
chr1 (1-58)||(12374459-12374516)
chr1 (7-52)||(18551584-18551629)
chr1 (1-58)||(26820605-26820662)
chr1 (6-59)||(35605573-35605626)
chr1 (1-58)||(36754415-36754472)
chr1 (1-58)||(40211470-40211527)
chr1 (1-52)||(4281455-4281507)
chr1 (6-58)||(5430989-5431041)
chr1 (6-58)||(50746779-50746831)
[»] scaffold0366 (1 HSPs)
scaffold0366 (6-52)||(810-856)
[»] scaffold0294 (1 HSPs)
scaffold0294 (6-52)||(17211-17257)
[»] chr6 (31 HSPs)
chr6 (8-58)||(3709927-3709977)
chr6 (8-58)||(32621534-32621584)
chr6 (1-58)||(7581112-7581169)
chr6 (6-58)||(2816958-2817010)
chr6 (6-58)||(31803545-31803597)
chr6 (6-58)||(33646903-33646955)
chr6 (1-52)||(743637-743688)
chr6 (1-64)||(7545391-7545454)
chr6 (1-52)||(10517273-10517324)
chr6 (1-52)||(27218958-27219009)
chr6 (8-63)||(28021295-28021350)
chr6 (1-52)||(32611499-32611550)
chr6 (1-52)||(33573891-33573942)
chr6 (6-52)||(3794123-3794169)
chr6 (6-52)||(7328597-7328643)
chr6 (6-52)||(8857157-8857203)
chr6 (6-52)||(17441789-17441835)
chr6 (8-58)||(18904333-18904383)
chr6 (6-52)||(19953778-19953824)
chr6 (6-52)||(28148683-28148729)
chr6 (1-58)||(216274-216331)
chr6 (6-58)||(2251906-2251959)
chr6 (9-58)||(3294832-3294881)
chr6 (1-50)||(9704492-9704541)
chr6 (9-58)||(31956132-31956180)
chr6 (6-58)||(361231-361283)
chr6 (6-58)||(7177363-7177415)
chr6 (7-51)||(7977131-7977175)
chr6 (6-50)||(13116574-13116618)
chr6 (6-58)||(30705028-30705080)
chr6 (6-58)||(32212344-32212396)
[»] scaffold0246 (1 HSPs)
scaffold0246 (7-52)||(24454-24498)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-58)||(8859-8916)
[»] scaffold0088 (1 HSPs)
scaffold0088 (6-58)||(10776-10828)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-52)||(3740-3791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-53)||(12211-12258)
[»] scaffold1185 (1 HSPs)
scaffold1185 (6-52)||(2343-2389)
[»] scaffold0608 (1 HSPs)
scaffold0608 (6-52)||(9040-9086)
[»] scaffold0460 (1 HSPs)
scaffold0460 (6-52)||(12533-12579)
[»] scaffold0128 (1 HSPs)
scaffold0128 (6-52)||(17694-17740)
[»] scaffold0028 (1 HSPs)
scaffold0028 (6-52)||(112182-112228)
[»] scaffold1236 (1 HSPs)
scaffold1236 (6-59)||(70-123)
[»] scaffold0983 (1 HSPs)
scaffold0983 (6-59)||(3622-3675)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-41)||(5628-5668)
[»] scaffold0117 (1 HSPs)
scaffold0117 (6-58)||(18429-18481)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 1553329 - 1553167
Alignment:
Q  14 tagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggggcatttaaaagagtgtacattacacttatataaaataattatgaatgat 113  Q
    ||||||||| ||||| |||| |||||||||||| ||||||||| ||| |||  | |||||||||||| ||||||||||||||||||||||||||||||||    
T  1553329 tagtggctaaagctcacacaatttaaatgtgaaaaagtgaggtattaagggt-acttaaaagagtgtccattacacttatataaaataattatgaatgat 1553231  T
Q  114 tatgacaatgaaattaagtaaaatgcattgaactcaaaaaagataataaatttaggtaggttgaa 178  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  1553230 tatgacaatgaaattaagtaaaatgcattgaactc-aaaaggataataaattcaggtaggttgaa 1553167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 1537580 - 1537677
Alignment:
Q  79 gtacattacacttatataaaa-taattatgaatgattatgacaatgaaat----taagtaaaatgcattgaactcaaaaaagataataaatttaggta 171  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||    || |||||||||||||||||||||||  |||||||||| |||||    
T  1537580 gtacattacacttatataaaaataattatgaattattatgacaatgaaattgtatatgtaaaatgcattgaactcaaaaattataataaattcaggta 1537677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 1545613 - 1545569
Alignment:
Q  182 ctataagtgatttgcgaccctttatcctaatgaaaaactactatt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1545613 ctataagtgatttgcgaccctttatcctaatgaaaaactactatt 1545569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10901770 - 10901707
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| ||||||||||||| || |||||| |||||| |||||||| ||||||| |||||||||||    
T  10901770 ttgtcaagtagcctagtgactggagctcacacattataaatgtggagaagtggggtgttagggg 10901707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 21402778 - 21402828
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggt 56  Q
    |||||| ||| |||||||||||| ||||||||||||||| |||||||||||    
T  21402778 aagtagactaatggctagagctcacacattttaaatgtggagaagtgaggt 21402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 26801679 - 26801725
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  26801679 aagtagcctagtggctagagctcacacaatttaattgtgaagaagtg 26801725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18503425 - 18503482
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||| || ||||| ||||||||||||||| ||||||| |||||    
T  18503425 ttgtcaagtagcctagtggttaaagctcacacattttaaatgtggagaagtggggtgt 18503482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21067010 - 21066958
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    |||| ||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  21067010 ttgtcaagtagcctagtggctagagctcgcaca-attaaatgtggagaagtgag 21066958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 32047206 - 32047157
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||| |||| ||||| |||| |||||||||||||    
T  32047206 tagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgt 32047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 10244839 - 10244891
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  10244839 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 10244891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 43119382 - 43119434
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  43119382 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 43119434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4960909 - 4960858
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  4960909 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 4960858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 12469043 - 12469086
Alignment:
Q  182 ctataagtgatttgcgaccctttatcctaatgaaaaactactat 225  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  12469043 ctataagtgatttgcgacccattttccttatgaaaaactactat 12469086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21762837 - 21762888
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  21762837 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 21762888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31026344 - 31026293
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  31026344 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 31026293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32619475 - 32619424
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  32619475 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 32619424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 33590558 - 33590515
Alignment:
Q  16 gtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||    
T  33590558 gtggctggagctcgcacattttaaatgtgtagaagtggggtgtt 33590515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43324686 - 43324636
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| |||||| |||||||||||||||| |||||||| ||||||||||||||    
T  43324686 ttgtcaagtagtctagtggctagagctcacacatttt-aatgtgaagaagtg 43324636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 3062894 - 3062848
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  3062894 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 3062848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 12640539 - 12640585
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  12640539 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 12640585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 13702143 - 13702093
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| || |||| |||||    
T  13702143 gtagcctagtggctggagctcacacattttaaatgtggaggagtggggtgt 13702093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 24508946 - 24508900
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  24508946 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 24508900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 24781150 - 24781104
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  24781150 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 24781104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 29617525 - 29617479
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  29617525 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 29617479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 35645719 - 35645673
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  35645719 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 35645673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 35950248 - 35950202
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  35950248 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 35950202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 46758360 - 46758310
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| || |||| |||||    
T  46758360 gtagcctagtggctggagctcacacattttaaatgtggaggagtggggtgt 46758310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47255035 - 47255081
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaag 47  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  47255035 ttgtcaagtagcctagtggctagagctcacacaatttaattgtgaag 47255081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34267496 - 34267553
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||| ||||||||| |||| ||||| |||| |||||||| ||||    
T  34267496 ttgtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtgaagtgt 34267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 43404933 - 43404982
Alignment:
Q  15 agtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||| ||||    
T  43404933 agtggatagagctcacacattttaaatgtggagaagtgagatgtttgggg 43404982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 11453635 - 11453679
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtga 53  Q
    |||||||||||||||||||| |||| ||||| |||| ||||||||    
T  11453635 tagcctagtggctagagctcacacaatttaattgtggagaagtga 11453679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 11692510 - 11692458
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||  ||||||||||||||||||||||  ||||||| |||||    
T  11692510 aagtagtctagtggtcagagctcgcacattttaaatgtagagaagtggggtgt 11692458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 12364868 - 12364817
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||||| |||||    
T  12364868 aagtagcctagtggctagagctcacaca-tataaatgtggagaagtggggtgt 12364817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20421709 - 20421757
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    ||||| |||||||| | |||||| ||||||||||||||| |||||||||    
T  20421709 aagtatcctagtggttcgagctcacacattttaaatgtggagaagtgag 20421757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 36803421 - 36803389
Alignment:
Q  27 tcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||||||||||||||| ||||||||||||||    
T  36803421 tcgcacattttaaatgtggagaagtgaggtgtt 36803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6167337 - 6167280
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  6167337 ttgttaagtagcctagtggctagagctcacacattttaaatgtggagaagtgaggtgt 6167280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 3741072 - 3741022
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  3741072 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 3741022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 8241168 - 8241118
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||| |||||    
T  8241168 gtagcctagtggttagagctcacacattttaaatgtggagaagtggggtgt 8241118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 14641059 - 14641105
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  14641059 aagtagcctagtggctagagctcgcacaatttaattgtggagaagtg 14641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9125786 - 9125730
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| | |||||||| |||||||||||||    
T  9125786 ttgtcaagtagcctagtggctagagctcacaca-tataaatgtggagaagtgaggtgt 9125730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10905081 - 10905138
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||||||||||||||||| || || |||| |||||||| ||||    
T  10905081 ttgtcaagtagcctagtggctagagctcgcacaattaaattgtggagaagtgaagtgt 10905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29691482 - 29691425
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  29691482 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 29691425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35515637 - 35515580
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||    
T  35515637 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaagtgt 35515580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2148681 - 2148633
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||| ||||||  ||||| ||||||||||||||||||||||||||||||    
T  2148681 ttgtcaagtagtttagtgactagagctcgcacattttaaatgtgaagaa 2148633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 3821373 - 3821417
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  3821373 gtagcctagtggctggagctcacacattttaaatgtggagaagtg 3821417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 18597528 - 18597477
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  18597528 aagtagcctagtggctagagctcacacattttaaat-aggagaagtgaggtgt 18597477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9835158 - 9835107
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  9835158 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 9835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21749323 - 21749374
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  21749323 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 21749374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25648029 - 25648080
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  25648029 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 25648080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 27241757 - 27241715
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  27241757 tagcctagtggctagagctcgcacatttt-aatgtggagaagtg 27241715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 38097386 - 38097347
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  38097386 ctagtggctagagctcacacattttaaatgtggagaagtg 38097347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 885103 - 885161
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||| |||||| ||||||| | |||||| |||||||||||| || ||||||||||||||    
T  885103 ttgtcaagtagtctagtggttggagctcacacattttaaatatggagaagtgaggtgtt 885161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4745826 - 4745872
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  4745826 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 4745872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 7913216 - 7913254
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtg 44  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  7913216 aagtagcgtagtggatagagctcgcacattttaaatgtg 7913254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8968869 - 8968823
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  8968869 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 8968823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 11795613 - 11795567
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  11795613 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 11795567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 12463876 - 12463830
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  12463876 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 12463830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 25400317 - 25400363
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  25400317 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 25400363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 27765377 - 27765331
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  27765377 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 27765331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 6734696 - 6734741
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  6734696 ctagtggctggagctcacacattttaaatgtggagaagtggggtgt 6734741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10804179 - 10804224
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    ||||||||||||||||||||||| |||| ||||| |||||| ||||    
T  10804179 aagtagcctagtggctagagctcacacaatttaactgtgaataagt 10804224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15241521 - 15241464
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  15241521 ttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgt 15241464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16720571 - 16720608
Alignment:
Q  21 tagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  16720571 tagagctcgcatattttaaatgtgaagaagtggggtgt 16720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2848333 - 2848281
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||| ||| ||||    
T  2848333 aagtagcctagtggctagagctcacacaatttaattgtggagaaatgaagtgt 2848281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10404252 - 10404204
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||    
T  10404252 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaa 10404204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 11535705 - 11535658
Alignment:
Q  10 agcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||| |||| || |||||||||||||||||||||    
T  11535705 agcctaatggctagagctcacacaatt-aaatgtgaagaagtgaggtgt 11535658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 16789190 - 16789138
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  16789190 aagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgt 16789138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 5328517 - 5328569
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  5328517 aagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgt 5328569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36359091 - 36359028
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| |||||| |||||||||||||||| ||||||||||| ||||||||||| ||||| |||||    
T  36359091 ttgtcaagtagtctagtggctagagctcacacattttaaaggtgaagaagtgcggtgtcagggg 36359028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 21548447 - 21548505
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||| |||||| ||||    
T  21548447 aagtagcctagtggctagagctcacacattttaattgtggagaagtggggtgttcgggg 21548505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 43875200 - 43875245
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  43875200 aagtagcatagtggctagagctcgcacattttaaatgtggagaagt 43875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 10761939 - 10761887
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||||||||    
T  10761939 aagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgt 10761887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 3912115 - 3912166
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||| |||||    
T  3912115 agtagcctagtggctagagctcacacattataaatgtggagaagtggggtgt 3912166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17072508 - 17072571
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||| ||||    
T  17072508 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcgggg 17072571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17575763 - 17575700
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||| ||||    
T  17575763 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcgggg 17575700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9735823 - 9735777
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  9735823 aagtagcatagtgactagagctcacacattttaaatgtgaagaagtg 9735777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 13059127 - 13059185
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||||||||||||||| |||| | ||||||||||||||| ||||||| ||||| |||||    
T  13059127 aagtagcctagtggctggagcacacacattttaaatgtggagaagtggggtgtcagggg 13059185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31024412 - 31024362
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  31024412 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 31024362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36035131 - 36035181
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  36035131 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 36035181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 44053392 - 44053442
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  44053392 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 44053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17027826 - 17027883
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  17027826 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 17027883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17558262 - 17558319
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  17558262 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 17558319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 40904644 - 40904599
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||    
T  40904644 ctagtggctgaagctcgcacattttaaatgtggagaagtgaggtgt 40904599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 10568205 - 10568153
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  10568205 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 10568153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26567193 - 26567241
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||| |||||||||||||||||||||||||||| ||||| |||| ||||    
T  26567193 ttgttaagtagcctagtggctagagctcgcacaatttaattgtggagaa 26567241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31211461 - 31211413
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||||||    
T  31211461 ttgtcaagtagcctaatggctgaagctcgcacattttaaatgtgaagaa 31211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 33473305 - 33473357
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||||| ||||    
T  33473305 aagtaacctagtggctagagctcacacaatttaattgtgaagaagtgaagtgt 33473357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 34894489 - 34894437
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  34894489 aagtagcctagtggctagagctcacacaatttaactgtggagaagtggggtgt 34894437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 37291042 - 37290990
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  37291042 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 37290990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 37708809 - 37708765
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  37708809 gtagcctagtggctggagctcacacattttaaatgtggagaagtg 37708765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7816528 - 7816477
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  7816528 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 7816477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11236870 - 11236932
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| |||||||||||||| |||||||| |||| ||||||| | ||||||||||||||| ||||    
T  11236870 ttgtcaagtagcctagtggatagagctcacaca-tttaaattttaagaagtgaggtgtttgggg 11236932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29514751 - 29514700
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  29514751 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 29514700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31450902 - 31450953
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  31450902 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 31450953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34266137 - 34266086
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  34266137 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 34266086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 257659 - 257613
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  257659 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 257613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 658261 - 658307
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  658261 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 658307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 843997 - 844043
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  843997 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 844043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 2787031 - 2787077
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  2787031 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 2787077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 9187173 - 9187219
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  9187173 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 9187219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 10736824 - 10736870
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  10736824 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 10736870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 17698642 - 17698596
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  17698642 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 17698596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 23178841 - 23178887
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| || || ||||||||||||    
T  23178841 aagtagcctagtggctagagctcacacaattaaattgtgaagaagtg 23178887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28909585 - 28909539
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  28909585 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 28909539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 37717483 - 37717437
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  37717483 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 37717437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 38107422 - 38107476
Alignment:
Q  5 aaagtagcctagtggctagag-ctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||    
T  38107422 aaagtagcctagtggctagagcctcgcacaatttaattgtggagaagtggggtgt 38107476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 38219518 - 38219564
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  38219518 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 38219564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39587667 - 39587621
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  39587667 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 39587621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43186973 - 43186927
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  43186973 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 43186927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 2908042 - 2908075
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaa 39  Q
    ||||||||||||||||||||||| ||||||||||    
T  2908042 aagtagcctagtggctagagctcacacattttaa 2908075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 5038681 - 5038632
Alignment:
Q  3 gtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||| |||||| |||| ||||| |||| |||||||    
T  5038681 gtaaagtagcctagtggctggagctcacacaatttaattgtggagaagtg 5038632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5962917 - 5962860
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||| |||||||||  | ||| |||||||||||||||||||| ||||||||    
T  5962917 ttgttaagtagtctagtggctgaaactcacacattttaaatgtgaagaaatgaggtgt 5962860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7763884 - 7763941
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||| ||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  7763884 ttgtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggggtgt 7763941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8034357 - 8034414
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||| ||| |||| ||||| |||| ||||||| |||||    
T  8034357 ttgtcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgt 8034414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21133132 - 21133075
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  21133132 ttgtcaagtagactagtggctagagctcacacaatttaattgtggagaagtggggtgt 21133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31712673 - 31712617
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| | |||||||| ||||||| |||||    
T  31712673 ttgtcaagtagcctagtggctagagctcacaca-tataaatgtggagaagtggggtgt 31712617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 33810757 - 33810708
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||| |||||| ||||||||||||||| ||||||| |||||    
T  33810757 tagcttagtggctggagctcacacattttaaatgtggagaagtggggtgt 33810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 34873199 - 34873154
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  34873199 ctagtggctggagctcacacattttaaatgtggagaagtggggtgt 34873154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 17499040 - 17499092
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||  |||||||||||||||  |||||| |||||    
T  17499040 aagtagtctagtggctagagctgacacattttaaatgtggggaagtggggtgt 17499092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 29260739 - 29260687
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||| |||||||||||| |||| ||||| |||| |||||||| ||||    
T  29260739 aagtagcctaatggctagagctcacacaatttaattgtggagaagtgaagtgt 29260687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 31152969 - 31153021
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||| |||||||||||| |||| ||||| |||| ||||||| |||||    
T  31152969 aagtagcctaatggctagagctcacacaatttaattgtggagaagtggggtgt 31153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33838449 - 33838401
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||    
T  33838449 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaa 33838401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18862377 - 18862326
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  18862377 ttgtcaagtagcctagtggctagagctcacacattttaaatgtggagaagtg 18862326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 15939407 - 15939351
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||| ||||    
T  15939407 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgttcgggg 15939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 17777113 - 17777165
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||| |||||    
T  17777113 aagtagcctagtggatagggctcgcacattttaaatgtggagaagtggggtgt 17777165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32854657 - 32854607
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    |||| |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  32854657 ttgtcaagtagcctagtggctggagctcacacattttaaatgtggagaagt 32854607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1844942 - 1844885
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  1844942 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 1844885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18254714 - 18254657
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||| |||||||| | |||||| ||||||||||||||||||||||| |||||    
T  18254714 ttgtcaagtaacctagtggttggagctcacacattttaaatgtgaagaagtggggtgt 18254657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 25067334 - 25067282
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| ||||| | ||||||||||||||||||||| || |||||||||||||    
T  25067334 aagtagtctagttgatagagctcgcacattttaaatatggagaagtgaggtgt 25067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 33228883 - 33228935
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  33228883 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 33228935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 38400434 - 38400382
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  38400434 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 38400382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1309076 - 1309122
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  1309076 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 1309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4562702 - 4562748
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  4562702 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 4562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 5947984 - 5947934
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| || |||| |||||    
T  5947984 gtagcctagtggctggagctcacacattttaaatgtggaggagtggggtgt 5947934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 6331681 - 6331635
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  6331681 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 6331635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10679321 - 10679371
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| ||||||    
T  10679321 ttgtcaagtagcctagaggccggagctcgcacattttaaatgtggagaagt 10679371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 17499069 - 17499023
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  17499069 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 17499023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 18694905 - 18694859
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  18694905 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 18694859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 20296538 - 20296492
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  20296538 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 20296492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 20497147 - 20497197
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||| |||| |||||| ||||||||||||||| ||||||| |||||    
T  20497147 gtagcctagaggctggagctcacacattttaaatgtggagaagtggggtgt 20497197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 34125865 - 34125819
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||| ||||||||||| |||| ||||||||||||||| |||||||    
T  34125865 aagtagtctagtggctagggctcacacattttaaatgtggagaagtg 34125819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40535399 - 40535445
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  40535399 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 40535445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 41509636 - 41509590
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  41509636 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 41509590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4878333 - 4878277
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| | |||||||| ||||||| |||||    
T  4878333 ttgtcaagtagcctagtggctagagctcacaca-tataaatgtggagaagtggggtgt 4878277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17078582 - 17078525
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| || | ||||| |||| |||||||| ||||    
T  17078582 ttgtcaagtagcctagtggctagagctcacaaaatttaattgtggagaagtgaagtgt 17078525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 25857242 - 25857291
Alignment:
Q  3 gtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||||||||||||| ||||  |||| |||| |||||||    
T  25857242 gtaaagtagcctagtggctagagctcacacaagttaattgtggagaagtg 25857291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28153087 - 28153144
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  28153087 ttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgt 28153144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 28194749 - 28194700
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  28194749 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 28194700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 44898443 - 44898484
Alignment:
Q  17 tggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  44898443 tggctagagctcacacattttaaatgtggagaagtggggtgt 44898484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 1260304 - 1260260
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaag 50  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||    
T  1260304 aagtagcctagtggctagagctcacacaatttaattgtggagaag 1260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 14518402 - 14518358
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||| |||||||||||| || |||||||    
T  14518402 gtagcctagtggctggagctcacacattttaaatatggagaagtg 14518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 25622209 - 25622257
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    |||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  25622209 aagtagtctagtgactggagctcatacattttaaatgtgaagaagtgag 25622257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 26307738 - 26307690
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    |||||| |||||||||||| ||  ||||||||||| |||||||||||||    
T  26307738 aagtagtctagtggctagatcttacacattttaaacgtgaagaagtgag 26307690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 40473500 - 40473552
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||| ||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  40473500 aagtaacctagtggctagagctcacacaatttaattgtggagaagtggggtgt 40473552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44822549 - 44822509
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaat 41  Q
    |||| ||||||||||||||||||||||| |||| |||||||    
T  44822549 ttgtcaagtagcctagtggctagagctcacacaatttaaat 44822509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 30305917 - 30305867
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  30305917 gtagcctagtggctggagctcacacattttaaatgtggagaagtgaggtgt 30305867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10402566 - 10402509
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||||||||    
T  10402566 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgt 10402509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 47929363 - 47929319
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||    
T  47929363 gtagcctagtggctagagctcacacattttaaatgtggagaagtg 47929319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26919413 - 26919464
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  26919413 ttgtcaagtagcctagtggctagagctcacacaatttaattgtgaagaagtg 26919464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 6371234 - 6371188
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  6371234 aagtagcctagtggctagagctcacacaatttaattgtgaagaagtg 6371188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 35851653 - 35851710
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||| || ||||||||||    
T  35851653 aagtagtctagtggctggagctcgcacattttaaatgtggagaaggga-gtgttagggg 35851710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 36099135 - 36099185
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  36099135 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 36099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 46933415 - 46933453
Alignment:
Q  20 ctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  46933415 ctagagctcacacattttaaatgtgaagaagtgaggtgt 46933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13264219 - 13264276
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||| |||||||||||||||| |||| ||||| |||||||||||| |||||    
T  13264219 ttgtcaagtagtctagtggctagagctcacacaatttaattgtgaagaagtggggtgt 13264276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40051747 - 40051690
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  40051747 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 40051690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 40486559 - 40486515
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  40486559 agtagcctagtggctagagctcacaca-tttaaatgtgaagaagtg 40486515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52731384 - 52731441
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||| ||||    
T  52731384 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaagtgt 52731441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2222659 - 2222607
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  2222659 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 2222607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 3036005 - 3036057
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  3036005 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 3036057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 33933689 - 33933741
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||| ||||| ||||| ||||||||| ||||||| |||||    
T  33933689 aagtagcctagtggctatagctcacacatattaaatgtggagaagtggggtgt 33933741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 41137874 - 41137922
Alignment:
Q  10 agcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  41137874 agcctagtggctagagctcaaacattttaaatatgaagaagtggggtgt 41137922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 624605 - 624542
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| ||||||  |||||| |||||||| ||||||||||||||| ||||||| ||||| |||||    
T  624605 ttgtcaagtagtttagtggttagagctcacacattttaaatgtggagaagtggggtgtcagggg 624542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5304955 - 5305006
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  5304955 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 5305006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10406974 - 10407025
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  10406974 ttgttaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 10407025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12581973 - 12582024
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  12581973 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 12582024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 16647168 - 16647211
Alignment:
Q  182 ctataagtgatttgcgaccctttatcctaatgaaaaactactat 225  Q
    ||||||||||||||||||||||| | || |||||||||||||||    
T  16647168 ctataagtgatttgcgacccttttttcttatgaaaaactactat 16647211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 49757229 - 49757280
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  49757229 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 49757280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 55536504 - 55536453
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  55536504 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 55536453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 55853053 - 55853104
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| | ||| ||||||||||||    
T  55853053 ttgtcaagtagcctagtggctagagctcacacaatctaattgtgaagaagtg 55853104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10141103 - 10141057
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  10141103 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 10141057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 13161865 - 13161827
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtga 45  Q
    |||||||||||||||||||||| || |||||||||||||    
T  13161865 agtagcctagtggctagagctcacaaattttaaatgtga 13161827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 39489899 - 39489853
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||||||||||| | ||||||||||||||  ||||||||||||||    
T  39489899 ctagtggctagagccctcacattttaaatgtagagaagtgaggtgtt 39489853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40994053 - 40994099
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  40994053 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 40994099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 43147334 - 43147380
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  43147334 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 43147380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43597015 - 43596969
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  43597015 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 43596969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 46774980 - 46775026
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  46774980 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 46775026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 48950904 - 48950858
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  48950904 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 48950858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 51791372 - 51791326
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  51791372 aagtagcctagtggttagagctcacacaatttaattgtgaagaagtg 51791326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 53634201 - 53634247
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  53634201 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 53634247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 54534944 - 54534894
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||| ||||||||| ||||| ||||||||| ||||||| |||||    
T  54534944 gtagcctagtgcctagagctcacacatattaaatgtggagaagtggggtgt 54534894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 1457965 - 1458014
Alignment:
Q  3 gtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||| |||||||| |||| ||||| |||| |||||||    
T  1457965 gtaaagtagcctagtggttagagctcacacaatttaattgtggagaagtg 1458014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11375835 - 11375891
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||| | ||||||||| |||||||||| |||| |||||||||||||    
T  11375835 ttgtcaagtagcctagag-ctagagctcacacattttaattgtggagaagtgaggtgt 11375891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 19654962 - 19654914
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  19654962 tagcctagtggatagagctcacacaatt-aaatgtgaagaagtgaggtgt 19654914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 23142705 - 23142746
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||||||||||||| |||||| ||||||||||||||| ||||    
T  23142705 gtagcctagtggctggagctcacacattttaaatgtggagaa 23142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 23176674 - 23176715
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaa 49  Q
    |||||||||||||| |||||| ||||||||||||||| ||||    
T  23176674 gtagcctagtggctggagctcacacattttaaatgtggagaa 23176715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35465560 - 35465503
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||||||||||||  ||| ||||| |||| ||||||| |||||    
T  35465560 ttgtcaagtagcctagtggctagagctcatacaatttaattgtggagaagtggggtgt 35465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42381058 - 42381115
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||| ||||| |||| ||||| |||| ||||||| |||||    
T  42381058 ttgtcaagtagcctagtggctaaagctcacacaatttaattgtggagaagtggggtgt 42381115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2688215 - 2688164
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| |||||||||| |||| || |||||    
T  2688215 aagtagcctagtggctagagctcacaca-tttaaatgtggagaaatggggtgt 2688164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 4513397 - 4513441
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtg 57  Q
    |||||||  ||||||| ||||||||||||||| ||||||||||||    
T  4513397 ctagtggtcagagctcacacattttaaatgtggagaagtgaggtg 4513441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 5803579 - 5803543
Alignment:
Q  23 gagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  5803579 gagctcacacattttaaatgtgaagaagtggggtgtt 5803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 30057342 - 30057290
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||||| |||| ||||| |||| ||||||| |||||    
T  30057342 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgt 30057290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 32339444 - 32339392
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||| ||||||||||||  ||||||||||||  |||||||| |||||    
T  32339444 aagtagcctaatggctagagctcagacattttaaatgcaaagaagtggggtgt 32339392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 43271667 - 43271719
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||| ||||| |||| ||||| |||| ||||||| |||||    
T  43271667 aagtagcctagtggctatagctcacacaatttaattgtggagaagtggggtgt 43271719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 49901602 - 49901558
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaag 50  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||    
T  49901602 aagtagcctagtggctagagctcacacaatttaattgtggagaag 49901558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 55021674 - 55021622
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||| ||||| |||| |||||||| ||||    
T  55021674 aagtagtctagtggctagagctcacacaatttaattgtggagaagtgaagtgt 55021622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 41710701 - 41710651
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  41710701 gtagcctagtggctggagctcacacattttaaatgtggagaagtgaggtgt 41710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25883933 - 25883990
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  25883933 ttgtcaagtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 25883990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 5641564 - 5641616
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  5641564 aagtagcttagtggctagagctcacacaatttaattgtgaagaagtgaggtgt 5641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9219895 - 9219843
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtga 53  Q
    |||| |||||||||||||||  |||||| ||||||||||||||||||||||||    
T  9219895 ttgtcaagtagcctagtggcatgagctcacacattttaaatgtgaagaagtga 9219843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19879326 - 19879263
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| ||||||| ||||||||||||||| |||| ||||| |||||||||||| |||||| ||||    
T  19879326 ttgtcaagtagcatagtggctagagctcacacaatttaattgtgaagaagtggggtgttcgggg 19879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 15085636 - 15085686
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| |||||||||||| || |||||||||||||    
T  15085636 gtagcctagtggctggagctcacacattttaaatatggagaagtgaggtgt 15085686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 27329884 - 27329934
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  27329884 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 27329934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 51879213 - 51879163
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  51879213 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 51879163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9114136 - 9114079
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||| || |||||| ||||||||||||||| ||||||| |||||    
T  9114136 ttgtcaagtagcctagtgactggagctcacacattttaaatgtggagaagtggggtgt 9114079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 50675687 - 50675744
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  50675687 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 50675744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 39720055 - 39720003
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  39720055 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 39720003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 40739161 - 40739213
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||||||||||  || |||||||||||||    
T  40739161 aagtagtctagtggctagagctcacacattttaaacatggagaagtgaggtgt 40739213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 41253701 - 41253757
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||||||||||||| |||||| |||||||||||| || | |||||||||||| ||||    
T  41253701 gtagcctagtggctggagctcacacattttaaatatggaaaagtgaggtgttcgggg 41253757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 41936357 - 41936409
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  41936357 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 41936409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46767461 - 46767417
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  46767461 gtagcctagtggctggagctcacacattttaaatgtggagaagtg 46767417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 53432687 - 53432739
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  53432687 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 53432739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11206115 - 11206064
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  11206115 ttgtcaagtagcctagtggctagagctcacacaatttaactgtggagaagtg 11206064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45701469 - 45701418
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  45701469 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 45701418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 49443375 - 49443425
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||| |||||    
T  49443375 agtagcctagtggctagagctcacaca-tttaaatgtggagaagtggggtgt 49443425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 51233685 - 51233639
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||    
T  51233685 agtagcctagtggctagagcccgcacatttt-aatgtggagaagtgag 51233639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 2523046 - 2523000
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  2523046 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 2523000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 4139120 - 4139074
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  4139120 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 4139074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 6919913 - 6919959
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  6919913 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 6919959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 7270075 - 7270029
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  7270075 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 7270029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7920445 - 7920395
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||    
T  7920445 ttgttaagtagcctagtggctagagctcacacaatttaattgtggagaagt 7920395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 8964726 - 8964772
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  8964726 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 8964772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 10482803 - 10482849
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  10482803 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 10482849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 15975272 - 15975226
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  15975272 aagtagcctagtggttagagctcacacaatttaattgtgaagaagtg 15975226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 16231842 - 16231888
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||| ||||||||| ||||||||||||||||||| || |||||||    
T  16231842 aagtagtctagtggctggagctcgcacattttaaatatggagaagtg 16231888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 18194458 - 18194412
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  18194458 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 18194412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 30555177 - 30555223
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  30555177 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 30555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 31327451 - 31327497
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  31327451 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 31327497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 33706677 - 33706723
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  33706677 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 33706723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 36478140 - 36478186
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||    
T  36478140 gtagcctagtggctggagctcacacatttttaatgtggagaagtgag 36478186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37488410 - 37488456
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  37488410 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 37488456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37800561 - 37800607
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  37800561 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 37800607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40933781 - 40933827
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  40933781 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 40933827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 44625177 - 44625227
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||| |||||    
T  44625177 gtagcctagtggttggagctcccacattttaaatgtggagaagtggggtgt 44625227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 48251692 - 48251646
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  48251692 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 48251646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 50496764 - 50496810
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  50496764 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 50496810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 4807995 - 4808048
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||| ||||||| |||||||| ||||||||||||||  ||||||| ||||||    
T  4807995 aagtagtctagtggttagagctcacacattttaaatgtagagaagtggggtgtt 4808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 5173962 - 5174018
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||||||||||||||||||||| ||||  ||||||||| ||||||| |||||| ||||    
T  5173962 agtagcctagtggctagagctcacaca-attaaatgtggagaagtggggtgttcgggg 5174018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8488540 - 8488495
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||| ||| |||||| ||||||||||||||| |||||||||||||    
T  8488540 ctagtagctggagctcacacattttaaatgtggagaagtgaggtgt 8488495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21324690 - 21324735
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaa 46  Q
    |||| ||||||||||||||||||||||| |||| ||||| ||||||    
T  21324690 ttgtcaagtagcctagtggctagagctcacacaatttaattgtgaa 21324735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 24430269 - 24430216
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||| |||||||||||||||| |||| ||||| |||| ||||||| ||||||    
T  24430269 aagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtt 24430216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 28951832 - 28951784
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||||    
T  28951832 tagcctagtggctagagctcacaca-tttaaatgtgaagatgtggggtgt 28951784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34102556 - 34102613
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||| ||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  34102556 ttgtcaagtaacctagtggctagagctcacacagtttaattgtggagaagtggggtgt 34102613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 49750364 - 49750408
Alignment:
Q  13 ctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||    
T  49750364 ctagtggctagagctt-cacattttaaatgtgaagaagtggggtgt 49750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53906504 - 53906447
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| | |||||| ||||    
T  53906504 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggaaaagtgaagtgt 53906447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3748552 - 3748600
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    ||||||||||||||||||||||| |||| || || |||| |||||||||    
T  3748552 aagtagcctagtggctagagctcacacaattaaattgtggagaagtgag 3748600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 14795231 - 14795179
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||| ||||| | |||||| ||||||||||||||| ||||||| |||||    
T  14795231 aagtagccgagtggttggagctcacacattttaaatgtggagaagtggggtgt 14795179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 23653169 - 23653224
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| |||||||||||||||| |||||||| |||||| | |||||||||||| ||||    
T  23653169 gtagtctagtggctagagctcacacatttt-aatgtggataagtgaggtgttcgggg 23653224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 32023534 - 32023482
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||  | ||| |||||||||||||||||||| ||||||||    
T  32023534 aagtagtctagtggctgaaactcacacattttaaatgtgaagaaatgaggtgt 32023482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 32429867 - 32429815
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||||| |||| ||||| |||| ||||||| |||||    
T  32429867 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgt 32429815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 33603885 - 33603933
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgag 54  Q
    ||||||||||||| || || |||||||||||||||||| || |||||||    
T  33603885 aagtagcctagtgtctggaactcgcacattttaaatgtaaaaaagtgag 33603933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 34757636 - 34757584
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| || || |||| |||||||| ||||    
T  34757636 aagtagcctagtggctagagctcacacaattaaattgtggagaagtgaagtgt 34757584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 39709152 - 39709112
Alignment:
Q  12 cctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||| |||||| ||||||||||||||| |||||||    
T  39709152 cctagtggctggagctcacacattttaaatgtggagaagtg 39709112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45551761 - 45551805
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||    
T  45551761 gtagcctagtggctagagctcacacaatttaattgtggagaagtg 45551805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 48739694 - 48739746
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  48739694 aagtagtctagtggctagagctcacacagtttaattgtggagaagtggggtgt 48739746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 50234242 - 50234198
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||    
T  50234242 gtagcctagtggctagagctcacacaatttaattgtggagaagtg 50234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 53163714 - 53163662
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| || | ||||||| |||||    
T  53163714 aagtagcctagtggctagagctcacacaatttaattgcggagaagtggggtgt 53163662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 53578073 - 53578029
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||    
T  53578073 gtagcctagtggctagagctcacacaatttaattgtggagaagtg 53578029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 53589096 - 53589052
Alignment:
Q  182 ctataagtgatttgcgaccctttat-cctaatgaaaaactactat 225  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||    
T  53589096 ctataagtgatttgcgaccattttttcctaatgaaaaactactat 53589052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50103986 - 50103929
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||||||||| |  ||||||||||||||| |||||||||||||    
T  50103986 ttgtcaagtagcctagtggctagagttgacacattttaaatgtggagaagtgaggtgt 50103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 17776960 - 17776913
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtga 53  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  17776960 aagtagcctagtggctagagctcgcacaatttaattgtggagaagtga 17776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12048069 - 12048126
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  12048069 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 12048126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12650329 - 12650386
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  12650329 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 12650386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 27579427 - 27579476
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||| ||||||||||||||| |||| || |||||    
T  27579427 tagcctagtggctagagctcacacattttaaatgtggagaaatggggtgt 27579476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28564290 - 28564347
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  28564290 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 28564347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7191152 - 7191100
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||| ||||| |||| |||||||||||||    
T  7191152 aagtaggctagtggctagagctcacacaatttaattgtggagaagtgaggtgt 7191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 21265776 - 21265724
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  21265776 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 21265724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 48638652 - 48638600
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  48638652 aagtagcctagtggctagagctcacacagtttaattgtggagaagtggggtgt 48638600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1151884 - 1151833
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||    
T  1151884 ttgtcaagtagcctagtgactagagctcacacaatttaattgtgaagaagtg 1151833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2277879 - 2277828
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  2277879 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 2277828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4482543 - 4482594
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  4482543 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 4482594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6702701 - 6702650
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| |||||||||| |||||||||||| |||| ||||| ||||||||||||    
T  6702701 ttgtcaagtagcctaatggctagagctcacacaatttaattgtgaagaagtg 6702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8741598 - 8741535
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| |||||||||||||| | |||||| |||||| |||||||| ||||||| ||||| |||||    
T  8741598 ttgtcaagtagcctagtggttggagctcacacattataaatgtggagaagtggggtgtcagggg 8741535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8984451 - 8984502
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  8984451 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 8984502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13773293 - 13773242
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  13773293 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 13773242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18101573 - 18101522
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| |||||||||||||||||||| |  ||||||||||||||| |||||||    
T  18101573 ttgtcaagtagcctagtggctagagttaacacattttaaatgtggagaagtg 18101522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 29527230 - 29527195
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtg 44  Q
    |||||||||||||||||||| |||||||||||||||    
T  29527230 tagcctagtggctagagctcacacattttaaatgtg 29527195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1570142 - 1570188
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  1570142 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 1570188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 6438014 - 6438060
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  6438014 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 6438060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 12502204 - 12502250
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  12502204 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 12502250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 15819551 - 15819597
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  15819551 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 15819597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 18512527 - 18512577
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  18512527 gtagtctagtggctggagctcacacattttaaatgtggagaagtggggtgt 18512577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 18534121 - 18534075
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  18534121 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 18534075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 27818688 - 27818642
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  27818688 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 27818642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 32594371 - 32594325
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  32594371 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 32594325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 32970751 - 32970797
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  32970751 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 32970797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40519493 - 40519539
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  40519493 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 40519539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 47930621 - 47930667
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  47930621 aagtagcctagtggttagagctcacacaatttaattgtgaagaagtg 47930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1247379 - 1247323
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||| ||||||||||||||||||||||  |||  ||||||||| |||||||||||||    
T  1247379 ttgtatagtagcctagtggctagagctcaaaca-attaaatgtggagaagtgaggtgt 1247323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7180559 - 7180616
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||| ||||||||| |||| ||||| |||| ||||||| |||||    
T  7180559 ttgtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggggtgt 7180616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12374459 - 12374516
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||| ||||| ||||||||| |||| ||||| |||||||||||| |||||    
T  12374459 ttgtcaagtagcatagtgactagagctcacacaatttaattgtgaagaagtggggtgt 12374516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 18551584 - 18551629
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||| ||||||||||||| ||||| |||| |||||||    
T  18551584 agtagcctagtggttagagctcgcacaatttaattgtggagaagtg 18551629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26820605 - 26820662
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||| |||||||||||||||||||||| ||||| |||| |||| || |||||    
T  26820605 ttgtcaagtaacctagtggctagagctcgcacaatttaattgtggagaaatggggtgt 26820662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 35605573 - 35605626
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    |||||||||||| |||||||||| |||| ||||| |||| ||||||| ||||||    
T  35605573 aagtagcctagtagctagagctcacacaatttaattgtggagaagtggggtgtt 35605626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36754472 - 36754415
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||| ||| |||| ||| ||||| ||||||||| |||||||||||||    
T  36754472 ttgtcaagtagcctaatggttagaactcacacatattaaatgtgtagaagtgaggtgt 36754415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40211470 - 40211527
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||| ||||| |||| ||||| |||| |||||||| ||||    
T  40211470 ttgtcaagtagcctagtggctatagctcacacaatttaattgtggagaagtgaagtgt 40211527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4281507 - 4281455
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcaca-ttttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||| |||||||    
T  4281507 ttgtcaagtagcctagtggctagagctctcacacatttaaatgtggagaagtg 4281455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 5430989 - 5431041
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||| |||||||||| |||||| ||||||||||||||| | ||||| |||||    
T  5430989 aagtatcctagtggctggagctcacacattttaaatgtggataagtggggtgt 5431041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 50746831 - 50746779
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| ||||||| ||||||||||||| ||||| |||| ||||||| |||||    
T  50746831 aagtagtctagtggttagagctcgcacaatttaattgtggagaagtggggtgt 50746779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 810 - 856
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  810 aagtagcctagtggctagagctcgcacaatttaattgtggagaagtg 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17211 - 17257
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  17211 aagtagcctagtggctagagctcacacaatttaattgtgaagaagtg 17257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 3709977 - 3709927
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  3709977 gtagcctagtggctggagctctcacattttaaatgtggagaagtggggtgt 3709927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 32621534 - 32621584
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  32621534 gtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgt 32621584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7581169 - 7581112
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||| ||||||    
T  7581169 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtaaggtgt 7581112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2817010 - 2816958
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  2817010 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 2816958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 31803545 - 31803597
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| |||||||||||||||| |||| ||||| |||| |||||||||||||    
T  31803545 aagtagtctagtggctagagctcacacaatttaattgtggagaagtgaggtgt 31803597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 33646955 - 33646903
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  33646955 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 33646903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 743688 - 743637
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| |||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  743688 ttgtcaagtagtctagtggctagagctcgcacaatttaattgtggagaagtg 743637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7545454 - 7545391
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttagggg 64  Q
    |||| |||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||| ||||    
T  7545454 ttgtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgttcgggg 7545391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10517324 - 10517273
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  10517324 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 10517273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27219009 - 27218958
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  27219009 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 27218958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 28021350 - 28021295
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgttaggg 63  Q
    |||||||||||||| |||||| |||||| |||||||| ||||||| ||||| ||||    
T  28021350 gtagcctagtggctggagctcacacattataaatgtggagaagtggggtgtcaggg 28021295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32611499 - 32611550
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  32611499 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 32611550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33573942 - 33573891
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  33573942 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 33573891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 3794123 - 3794169
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  3794123 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 3794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 7328597 - 7328643
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  7328597 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 7328643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8857203 - 8857157
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  8857203 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 8857157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17441789 - 17441835
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  17441789 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 17441835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 18904383 - 18904333
Alignment:
Q  8 gtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||||| |||||    
T  18904383 gtagtctagtggctggagctcacacattttaaatgtggagaagtggggtgt 18904333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 19953778 - 19953824
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  19953778 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 19953824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 28148683 - 28148729
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  28148683 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 28148729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 216331 - 216274
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| |||||||||||||| |||||||| |||| ||||| |||| ||||||| |||||    
T  216331 ttgtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgt 216274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 2251959 - 2251906
Alignment:
Q  6 aagtagcctagtggctagagctcgcaca-ttttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||| ||||||| |||| ||||||||||| ||||||| |||||    
T  2251959 aagtagcctagtggccagagctcacacatttttaaatgtggagaagtggggtgt 2251906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 3294881 - 3294832
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||| ||| |||| ||||| |||||||||||| |||||    
T  3294881 tagcctagtggctagaactcacacaatttaattgtgaagaagtggggtgt 3294832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9704541 - 9704492
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaag 50  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||    
T  9704541 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaag 9704492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 31956132 - 31956180
Alignment:
Q  9 tagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||||||||||||| ||||| || |||||||||||||| |||||    
T  31956132 tagcctagtggctagagctcacacatatt-aatgtgaagaagtggggtgt 31956180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 361283 - 361231
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||| ||||||||||||||| || ||||||||| || ||||||| |||||    
T  361283 aagtagcatagtggctagagctcacatattttaaatatggagaagtggggtgt 361231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7177415 - 7177363
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||  ||||| |||| ||||||| |||||    
T  7177415 aagtagcctagtggctagagctcacactgtttaattgtggagaagtggggtgt 7177363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 7977175 - 7977131
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagt 51  Q
    ||||||||||||| |||||||| ||||||||||||  ||||||||    
T  7977175 agtagcctagtggttagagctcacacattttaaatacgaagaagt 7977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 13116574 - 13116618
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaag 50  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||    
T  13116574 aagtagcctagtggctagagctcacacaatttaattgtggagaag 13116618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 30705080 - 30705028
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||| ||||||||||||| |||| ||||| |||| ||||||| |||||    
T  30705080 aagtagcctggtggctagagctcacacaatttaattgtggagaagtggggtgt 30705028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 32212344 - 32212396
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||| ||||||||  || |||||| |||||||||||||||||||| |||||    
T  32212344 aagtagtctagtggcaggaactcgcatattttaaatgtgaagaagtggggtgt 32212396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24498 - 24454
Alignment:
Q  7 agtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  24498 agtagcctagtggctagagctcacaca-tttaaatgtgaagaagtg 24454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8859 - 8916
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||| ||||||||||||||||||| ||| |||| ||||| ||||||||| ||||||||    
T  8859 ttgtcaagtagcctagtggctagaactcacacaatttaattgtgaagaaatgaggtgt 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 10776 - 10828
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  10776 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgt 10828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3791 - 3740
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  3791 ttgtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtg 3740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 12211 - 12258
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtga 53  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||||    
T  12211 aagtagcctagtggctagagctcacacaatttaattgtggagaagtga 12258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 2343 - 2389
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  2343 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 2389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9086 - 9040
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  9086 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 9040  T

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Target: scaffold0460 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 12579 - 12533
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  12579 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 12533  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 17740 - 17694
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  17740 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 17694  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 112228 - 112182
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtg 52  Q
    ||||||||||||||||||||||| |||| ||||| |||| |||||||    
T  112228 aagtagcctagtggctagagctcacacaatttaattgtggagaagtg 112182  T

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Target: scaffold1236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1236
Description:

Target: scaffold1236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 70 - 123
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    ||||| |||||||| ||||| || ||||||||||||||||||||| || |||||    
T  70 aagtaacctagtggttagaggtcacacattttaaatgtgaagaagcgaagtgtt 123  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 3622 - 3675
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgtt 59  Q
    ||||| |||||||| ||||| || ||||||||||||||||||||| || |||||    
T  3622 aagtaacctagtggttagaggtcacacattttaaatgtgaagaagcgaagtgtt 3675  T

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Target: scaffold0464 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5628 - 5668
Alignment:
Q  1 ttgtaaagtagcctagtggctagagctcgcacattttaaat 41  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  5628 ttgtcaagtagcctagtggttagagctcacacattttaaat 5668  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 18429 - 18481
Alignment:
Q  6 aagtagcctagtggctagagctcgcacattttaaatgtgaagaagtgaggtgt 58  Q
    |||||||||| |||||||||||| |||| ||||| |||| ||||||| |||||    
T  18429 aagtagcctaatggctagagctcacacaatttaattgtggagaagtggggtgt 18481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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