View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3379-Insertion-1 (Length: 1147)

Name: NF3379-Insertion-1
Description: NF3379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3379-Insertion-1
NF3379-Insertion-1
[»] chr4 (54 HSPs)
chr4 (7-561)||(43505777-43506331)
chr4 (635-1085)||(43505326-43505769)
chr4 (356-466)||(403443-403553)
chr4 (391-514)||(50681168-50681293)
chr4 (394-467)||(15177284-15177357)
chr4 (391-520)||(45935299-45935423)
chr4 (391-464)||(41336679-41336751)
chr4 (356-509)||(44863006-44863151)
chr4 (394-503)||(15173382-15173493)
chr4 (391-459)||(54069496-54069564)
chr4 (391-509)||(25904289-25904413)
chr4 (391-459)||(42404077-42404145)
chr4 (397-467)||(31851369-31851439)
chr4 (391-457)||(39603526-39603592)
chr4 (391-509)||(44797763-44797877)
chr4 (391-509)||(17204009-17204129)
chr4 (391-454)||(31076465-31076528)
chr4 (391-509)||(19494785-19494905)
chr4 (402-459)||(33587044-33587101)
chr4 (391-507)||(3155486-3155594)
chr4 (391-467)||(22030119-22030194)
chr4 (391-467)||(1242354-1242426)
chr4 (395-514)||(50662815-50662926)
chr4 (391-467)||(29388528-29388605)
chr4 (472-509)||(47119097-47119134)
chr4 (392-435)||(51630058-51630101)
chr4 (388-459)||(54425968-54426039)
chr4 (391-453)||(256858-256920)
chr4 (356-402)||(7839383-7839429)
chr4 (135-169)||(55941027-55941061)
chr4 (391-436)||(17884014-17884059)
chr4 (388-514)||(46592286-46592414)
chr4 (395-437)||(437515-437558)
chr4 (392-431)||(13216284-13216323)
chr4 (399-437)||(2702985-2703023)
chr4 (392-503)||(3070053-3070166)
chr4 (391-437)||(7601704-7601750)
chr4 (360-398)||(9760446-9760484)
chr4 (392-434)||(25885807-25885849)
chr4 (364-398)||(40831059-40831093)
chr4 (391-461)||(40831114-40831184)
chr4 (262-348)||(41336815-41336901)
chr4 (360-437)||(51044506-51044584)
chr4 (391-465)||(55414499-55414573)
chr4 (392-437)||(3175896-3175941)
chr4 (472-509)||(4212813-4212850)
chr4 (391-460)||(9760362-9760431)
chr4 (262-347)||(15173232-15173317)
chr4 (472-509)||(27330187-27330224)
chr4 (357-398)||(33586978-33587019)
chr4 (392-437)||(42321959-42322004)
chr4 (472-509)||(49202527-49202564)
chr4 (392-437)||(49803156-49803201)
chr4 (357-398)||(54069440-54069481)
[»] chr8 (39 HSPs)
chr8 (391-514)||(14956374-14956499)
chr8 (391-506)||(9130386-9130506)
chr8 (391-514)||(1058153-1058278)
chr8 (397-509)||(12976087-12976198)
chr8 (390-515)||(28763238-28763360)
chr8 (391-453)||(12497310-12497372)
chr8 (402-464)||(32975978-32976040)
chr8 (391-509)||(38750229-38750349)
chr8 (392-508)||(41475140-41475248)
chr8 (391-503)||(15180418-15180532)
chr8 (391-462)||(42043424-42043495)
chr8 (391-514)||(35534690-35534813)
chr8 (406-509)||(36963439-36963544)
chr8 (401-467)||(38353265-38353330)
chr8 (406-508)||(29168146-29168250)
chr8 (391-459)||(16825616-16825684)
chr8 (447-509)||(900821-900886)
chr8 (442-509)||(34236043-34236112)
chr8 (392-454)||(35644061-35644123)
chr8 (391-447)||(6525753-6525809)
chr8 (391-467)||(10758335-10758411)
chr8 (400-456)||(11861733-11861789)
chr8 (411-467)||(41821472-41821528)
chr8 (441-509)||(26215377-26215447)
chr8 (400-467)||(30151050-30151120)
chr8 (466-509)||(38602240-38602283)
chr8 (402-453)||(42051982-42052033)
chr8 (391-437)||(16736029-16736075)
chr8 (359-425)||(20672729-20672795)
chr8 (475-509)||(29819045-29819079)
chr8 (392-433)||(1112802-1112843)
chr8 (392-437)||(3537111-3537156)
chr8 (392-437)||(10114435-10114479)
chr8 (360-397)||(30657798-30657835)
chr8 (126-175)||(34201061-34201110)
chr8 (409-487)||(35749661-35749741)
chr8 (472-509)||(40981001-40981038)
chr8 (392-429)||(42237502-42237539)
chr8 (392-437)||(42597346-42597391)
[»] chr3 (56 HSPs)
chr3 (391-511)||(30956705-30956827)
chr3 (391-511)||(30972517-30972639)
chr3 (356-466)||(35696176-35696286)
chr3 (391-516)||(35959535-35959662)
chr3 (394-496)||(29520561-29520664)
chr3 (397-508)||(1508665-1508779)
chr3 (391-515)||(20880342-20880467)
chr3 (391-499)||(39980610-39980720)
chr3 (394-496)||(5331178-5331281)
chr3 (392-508)||(2719341-2719459)
chr3 (392-496)||(46778307-46778413)
chr3 (391-514)||(20170389-20170514)
chr3 (392-464)||(12862327-12862399)
chr3 (391-514)||(24684902-24685027)
chr3 (391-509)||(36631130-36631250)
chr3 (394-452)||(29520413-29520470)
chr3 (359-503)||(28795878-28796025)
chr3 (431-505)||(31365391-31365467)
chr3 (391-454)||(51929439-51929503)
chr3 (392-509)||(53789541-53789660)
chr3 (391-467)||(7814218-7814290)
chr3 (394-452)||(5331372-5331429)
chr3 (391-437)||(44061102-44061148)
chr3 (406-467)||(37689148-37689209)
chr3 (468-509)||(42747909-42747950)
chr3 (391-447)||(10704652-10704708)
chr3 (470-509)||(849553-849592)
chr3 (124-171)||(17568696-17568743)
chr3 (356-398)||(901930-901972)
chr3 (356-398)||(39980735-39980777)
chr3 (393-431)||(49034344-49034382)
chr3 (392-437)||(2128331-2128376)
chr3 (392-437)||(15304427-15304472)
chr3 (388-437)||(42808924-42808973)
chr3 (451-509)||(47132248-47132308)
chr3 (391-463)||(583965-584037)
chr3 (391-459)||(18405911-18405979)
chr3 (262-306)||(25447174-25447218)
chr3 (449-514)||(34034037-34034104)
chr3 (392-483)||(4400943-4401037)
chr3 (474-509)||(38901967-38902002)
chr3 (471-509)||(21335560-21335598)
chr3 (429-515)||(42800032-42800118)
chr3 (475-509)||(46886852-46886886)
chr3 (356-398)||(47132337-47132379)
chr3 (392-437)||(10101556-10101601)
chr3 (392-437)||(10212481-10212526)
chr3 (416-503)||(12833871-12833956)
chr3 (360-437)||(16790404-16790481)
chr3 (475-512)||(26911581-26911618)
chr3 (392-437)||(30669050-30669095)
chr3 (408-437)||(32582280-32582309)
chr3 (392-437)||(37689464-37689509)
chr3 (394-439)||(39602291-39602336)
chr3 (392-437)||(42809246-42809291)
chr3 (420-461)||(48281030-48281071)
[»] chr2 (54 HSPs)
chr2 (391-509)||(41407172-41407292)
chr2 (392-504)||(32592463-32592577)
chr2 (391-509)||(39659588-39659707)
chr2 (396-483)||(26201925-26202015)
chr2 (391-514)||(15305522-15305648)
chr2 (391-514)||(42659230-42659355)
chr2 (391-437)||(42420373-42420419)
chr2 (391-486)||(42868540-42868637)
chr2 (391-509)||(15757738-15757865)
chr2 (391-486)||(41241211-41241308)
chr2 (396-461)||(20933676-20933741)
chr2 (391-467)||(43279606-43279682)
chr2 (421-512)||(31744234-31744325)
chr2 (391-507)||(41851408-41851526)
chr2 (391-437)||(4026762-4026808)
chr2 (391-465)||(45229429-45229503)
chr2 (391-509)||(12464552-12464672)
chr2 (441-509)||(19608744-19608814)
chr2 (441-509)||(40682492-40682562)
chr2 (392-466)||(13325486-13325560)
chr2 (391-453)||(41812169-41812231)
chr2 (427-505)||(11863806-11863886)
chr2 (391-439)||(1875069-1875117)
chr2 (391-462)||(23974571-23974640)
chr2 (391-467)||(31561832-31561908)
chr2 (473-509)||(40835435-40835471)
chr2 (472-515)||(2416188-2416231)
chr2 (468-503)||(27317269-27317304)
chr2 (455-507)||(27695730-27695784)
chr2 (245-348)||(30331806-30331909)
chr2 (391-434)||(36114367-36114410)
chr2 (397-509)||(38010283-38010397)
chr2 (391-450)||(39073768-39073827)
chr2 (472-514)||(423464-423506)
chr2 (391-437)||(3611171-3611217)
chr2 (399-437)||(5998789-5998827)
chr2 (392-434)||(10619295-10619337)
chr2 (392-434)||(18962118-18962160)
chr2 (356-398)||(20952361-20952403)
chr2 (391-486)||(22971597-22971693)
chr2 (356-398)||(26202034-26202076)
chr2 (444-507)||(26626759-26626824)
chr2 (441-509)||(27316943-27317008)
chr2 (356-398)||(32592592-32592634)
chr2 (356-398)||(40279413-40279455)
chr2 (472-514)||(41812236-41812278)
chr2 (391-437)||(42457893-42457939)
chr2 (356-398)||(43279551-43279593)
chr2 (388-437)||(3102638-3102687)
chr2 (388-437)||(5133717-5133766)
chr2 (392-437)||(7825197-7825242)
chr2 (393-466)||(10490545-10490618)
chr2 (392-437)||(35459855-35459900)
chr2 (472-509)||(40279082-40279119)
[»] chr6 (40 HSPs)
chr6 (391-493)||(18076083-18076187)
chr6 (388-454)||(30536634-30536700)
chr6 (391-509)||(24626166-24626286)
chr6 (356-467)||(29754121-29754234)
chr6 (411-517)||(6538380-6538488)
chr6 (392-514)||(34430582-34430706)
chr6 (363-466)||(35070679-35070785)
chr6 (391-467)||(8147618-8147693)
chr6 (391-467)||(30536393-30536469)
chr6 (391-467)||(6016454-6016530)
chr6 (391-463)||(12836251-12836323)
chr6 (410-514)||(30926406-30926510)
chr6 (396-454)||(31623488-31623546)
chr6 (393-438)||(4163119-4163164)
chr6 (393-438)||(4224740-4224785)
chr6 (391-467)||(6909951-6910028)
chr6 (392-437)||(9093636-9093681)
chr6 (392-437)||(29274309-29274354)
chr6 (471-507)||(10645480-10645516)
chr6 (391-439)||(33117485-33117533)
chr6 (471-506)||(9632785-9632820)
chr6 (137-172)||(14721239-14721274)
chr6 (263-334)||(34404656-34404727)
chr6 (441-509)||(35069433-35069503)
chr6 (470-509)||(35098920-35098959)
chr6 (383-437)||(103398-103452)
chr6 (359-437)||(2205615-2205693)
chr6 (356-398)||(6016397-6016439)
chr6 (391-461)||(8201154-8201224)
chr6 (391-429)||(28621189-28621227)
chr6 (383-437)||(34508995-34509049)
chr6 (392-437)||(264316-264361)
chr6 (137-170)||(322519-322552)
chr6 (388-437)||(2206535-2206584)
chr6 (388-437)||(8349740-8349789)
chr6 (392-437)||(9559621-9559666)
chr6 (388-429)||(9582674-9582715)
chr6 (392-437)||(10728577-10728622)
chr6 (289-334)||(30536572-30536617)
chr6 (392-437)||(31624203-31624248)
[»] chr7 (53 HSPs)
chr7 (392-509)||(21568708-21568827)
chr7 (391-514)||(46078013-46078138)
chr7 (391-467)||(45806556-45806632)
chr7 (391-514)||(9210494-9210619)
chr7 (394-448)||(45806408-45806462)
chr7 (404-509)||(23989576-23989683)
chr7 (391-517)||(45263956-45264086)
chr7 (397-517)||(33128620-33128742)
chr7 (391-453)||(420289-420351)
chr7 (391-459)||(33266563-33266631)
chr7 (405-461)||(48140137-48140193)
chr7 (391-449)||(31247607-31247665)
chr7 (411-509)||(18865149-18865249)
chr7 (391-509)||(38138558-38138678)
chr7 (406-465)||(4970882-4970941)
chr7 (359-437)||(7244647-7244725)
chr7 (391-454)||(20258438-20258503)
chr7 (409-450)||(31247666-31247707)
chr7 (395-448)||(45004700-45004753)
chr7 (391-509)||(48469921-48470035)
chr7 (126-170)||(3554521-3554565)
chr7 (391-514)||(30571010-30571127)
chr7 (391-455)||(31744236-31744300)
chr7 (391-447)||(45338384-45338440)
chr7 (393-517)||(119772-119899)
chr7 (472-511)||(22283868-22283907)
chr7 (445-517)||(38500051-38500125)
chr7 (411-518)||(40196239-40196345)
chr7 (417-514)||(5947027-5947122)
chr7 (356-398)||(19022607-19022649)
chr7 (391-454)||(20234409-20234474)
chr7 (391-437)||(28613613-28613659)
chr7 (391-437)||(43152981-43153027)
chr7 (397-507)||(33287718-33287830)
chr7 (391-439)||(19302638-19302686)
chr7 (391-431)||(20269527-20269567)
chr7 (397-461)||(20526367-20526431)
chr7 (392-436)||(26935630-26935674)
chr7 (441-506)||(33552940-33553007)
chr7 (444-509)||(47795838-47795905)
chr7 (137-172)||(4909149-4909184)
chr7 (388-431)||(11700342-11700385)
chr7 (472-511)||(22296367-22296406)
chr7 (391-507)||(34464292-34464409)
chr7 (391-437)||(25599878-25599924)
chr7 (472-514)||(27863859-27863901)
chr7 (393-431)||(34083606-34083644)
chr7 (391-437)||(40009415-40009461)
chr7 (126-171)||(8160415-8160460)
chr7 (391-460)||(38639911-38639980)
chr7 (393-454)||(39279891-39279951)
chr7 (392-433)||(40689066-40689107)
chr7 (359-437)||(42656460-42656540)
[»] chr1 (76 HSPs)
chr1 (394-514)||(3234105-3234227)
chr1 (391-509)||(14331660-14331780)
chr1 (400-514)||(37473265-37473381)
chr1 (391-509)||(1510389-1510508)
chr1 (391-514)||(14576732-14576857)
chr1 (391-467)||(14385842-14385918)
chr1 (391-508)||(33541787-33541906)
chr1 (400-511)||(17830023-17830136)
chr1 (392-509)||(5709433-5709553)
chr1 (393-507)||(29904633-29904748)
chr1 (391-509)||(51688576-51688696)
chr1 (392-509)||(41505558-41505676)
chr1 (391-462)||(37517273-37517344)
chr1 (406-514)||(41195288-41195398)
chr1 (409-467)||(44932029-44932087)
chr1 (391-505)||(42391241-42391356)
chr1 (289-398)||(3233971-3234079)
chr1 (426-519)||(38247315-38247409)
chr1 (391-466)||(27976511-27976586)
chr1 (400-508)||(30191863-30191973)
chr1 (391-467)||(31774120-31774192)
chr1 (391-438)||(47432040-47432087)
chr1 (441-509)||(47498962-47499032)
chr1 (392-450)||(18556859-18556917)
chr1 (391-437)||(45145171-45145217)
chr1 (443-509)||(1829075-1829143)
chr1 (391-432)||(41184729-41184770)
chr1 (399-464)||(42174775-42174840)
chr1 (393-509)||(43990119-43990240)
chr1 (422-515)||(5741527-5741622)
chr1 (391-447)||(45661188-45661244)
chr1 (391-459)||(49938655-49938723)
chr1 (254-395)||(2295105-2295245)
chr1 (441-509)||(5894282-5894352)
chr1 (441-517)||(22343951-22344029)
chr1 (263-334)||(36514606-36514677)
chr1 (391-461)||(7861999-7862069)
chr1 (393-510)||(7927711-7927830)
chr1 (264-334)||(38001664-38001734)
chr1 (388-437)||(11560625-11560674)
chr1 (424-514)||(17727207-17727299)
chr1 (259-312)||(33204320-33204373)
chr1 (391-435)||(36872215-36872260)
chr1 (468-509)||(51190728-51190769)
chr1 (414-511)||(1509621-1509720)
chr1 (391-435)||(51190808-51190852)
chr1 (264-347)||(1432571-1432654)
chr1 (391-434)||(9572187-9572230)
chr1 (391-438)||(13809942-13809989)
chr1 (363-438)||(15609036-15609114)
chr1 (391-438)||(24915130-24915177)
chr1 (457-509)||(27820475-27820529)
chr1 (391-439)||(30286599-30286649)
chr1 (391-438)||(30581746-30581793)
chr1 (391-438)||(30582027-30582074)
chr1 (472-511)||(38189654-38189693)
chr1 (472-511)||(46423149-46423188)
chr1 (289-398)||(49938753-49938861)
chr1 (395-437)||(289185-289227)
chr1 (391-437)||(7028237-7028283)
chr1 (356-398)||(17603406-17603448)
chr1 (393-439)||(26678846-26678892)
chr1 (391-437)||(34619457-34619503)
chr1 (472-514)||(34795566-34795608)
chr1 (395-433)||(36070199-36070237)
chr1 (472-514)||(37617564-37617606)
chr1 (383-437)||(48748654-48748707)
chr1 (383-437)||(50319237-50319291)
chr1 (392-437)||(8852805-8852850)
chr1 (383-436)||(14737776-14737829)
chr1 (262-303)||(24334295-24334336)
chr1 (396-437)||(30043855-30043896)
chr1 (391-464)||(37631638-37631711)
chr1 (357-398)||(42174861-42174902)
chr1 (472-509)||(45855732-45855769)
chr1 (392-433)||(45990138-45990179)
[»] chr5 (52 HSPs)
chr5 (397-517)||(12554326-12554448)
chr5 (356-451)||(42500263-42500364)
chr5 (391-514)||(3735570-3735695)
chr5 (391-514)||(32372490-32372615)
chr5 (392-508)||(7319091-7319209)
chr5 (391-463)||(16458058-16458129)
chr5 (262-438)||(9107056-9107231)
chr5 (391-518)||(10639816-10639944)
chr5 (390-509)||(26005316-26005437)
chr5 (393-467)||(29925756-29925830)
chr5 (393-454)||(15015779-15015840)
chr5 (391-509)||(24030481-24030601)
chr5 (391-454)||(36227723-36227786)
chr5 (359-514)||(7706023-7706183)
chr5 (391-509)||(13697838-13697958)
chr5 (444-506)||(19460508-19460572)
chr5 (396-514)||(25461840-25461959)
chr5 (406-509)||(32941342-32941446)
chr5 (391-509)||(40426633-40426756)
chr5 (383-437)||(14932235-14932290)
chr5 (410-514)||(25460958-25461064)
chr5 (391-438)||(35445999-35446046)
chr5 (396-466)||(25461731-25461800)
chr5 (356-398)||(37954692-37954734)
chr5 (400-461)||(7999127-7999188)
chr5 (399-509)||(12857792-12857904)
chr5 (391-438)||(3932764-3932811)
chr5 (391-437)||(4014503-4014549)
chr5 (392-437)||(9202828-9202873)
chr5 (287-348)||(16457933-16457994)
chr5 (357-402)||(32009694-32009739)
chr5 (441-507)||(34736645-34736713)
chr5 (427-509)||(40439070-40439153)
chr5 (392-436)||(10363696-10363740)
chr5 (264-348)||(10640008-10640092)
chr5 (393-437)||(11615453-11615497)
chr5 (472-511)||(3520300-3520339)
chr5 (441-509)||(28776856-28776926)
chr5 (391-437)||(465899-465945)
chr5 (392-430)||(11835229-11835267)
chr5 (137-171)||(19293449-19293483)
chr5 (254-312)||(37112199-37112257)
chr5 (391-437)||(37112337-37112383)
chr5 (395-433)||(40864671-40864709)
chr5 (129-175)||(41558701-41558747)
chr5 (392-437)||(7674593-7674638)
chr5 (472-509)||(9202900-9202937)
chr5 (265-334)||(11064735-11064804)
chr5 (392-437)||(12425516-12425561)
chr5 (472-509)||(12433532-12433569)
chr5 (475-519)||(29845052-29845097)
chr5 (472-509)||(32009579-32009616)
[»] scaffold0012 (1 HSPs)
scaffold0012 (401-467)||(207670-207736)
[»] scaffold0018 (1 HSPs)
scaffold0018 (397-514)||(157973-158092)
[»] scaffold0024 (2 HSPs)
scaffold0024 (392-437)||(21358-21403)
scaffold0024 (392-436)||(58883-58927)
[»] scaffold0050 (1 HSPs)
scaffold0050 (446-511)||(58473-58540)
[»] scaffold0103 (1 HSPs)
scaffold0103 (392-437)||(51513-51558)


Alignment Details
Target: chr4 (Bit Score: 498; Significance: 0; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 7 - 561
Target Start/End: Complemental strand, 43506331 - 43505777
Alignment:
Q  7 agtttcttccttggttgtgcttaacctctccactaataagctttcggtaacaatgcttacattctaagcatttcattctttacgttcttatgatggaagg 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43506331 agtttcttccttggttgtgcttaacctctccactaataagctttcggtaacaatgcttacattctaagcatttcattcttttcgttcttatgatggaagg 43506232  T
Q  107 cgtgttcggtgtttgggtgtaattactttaaattatgtaattttcttaaattattattggtgtcaatgtacaagtattgtgtcaggtgtatgtgtgtcaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  43506231 cgtgttcggtgtttgggtgtaattactttaaattatgtaattttcttaaattattattggtgtcaatgtgcaagtattgtgtcaggtgtatgtgtgtcta 43506132  T
Q  207 tgctttatagtggacaagttccattttagtgttagatatagggcatatttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43506131 tgctttatagtggacaagttccattttagtgttagatatagggcatatttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgtt 43506032  T
Q  307 agggaggactcgtgaaaatatcttatgagagttttcataagcnnnnnnncaacttattttcatatgttctccaatctagcttataaaaacaatttaacgt 406  Q
    |||||||||||||||||||| |||||||||||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43506031 agggaggactcgtgaaaatagcttatgagagttttcataagctttttttcaacttattttcatatgatctccaatctagcttataaaaacaatttaacgt 43505932  T
Q  407 tattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaataagttgtttatccaa 506  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43505931 tattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaataagttgtttatccaa 43505832  T
Q  507 acatgcccataatttgagtttaatttttcattggtggttcagctgagcttaattt 561  Q
    |||||||||||||||||||||||||||||||||||| || || ||||||||||||    
T  43505831 acatgcccataatttgagtttaatttttcattggtgattaagttgagcttaattt 43505777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 635 - 1085
Target Start/End: Complemental strand, 43505769 - 43505326
Alignment:
Q  635 acaattacgattggttattgtttaatggtgaaacttctgtgactttgccgggtgatataccgtgctcgcattgtagtgtttattgtttaggttgaatgaa 734  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43505769 acaattacgattggttattgtttaatggtgaaacttctgtgactttgccgggtgatatacagtgctcgcattgtagtgtttattgtttaggttgaatgaa 43505670  T
Q  735 tgacttgattttctcttggtggttctctccttttaagtcagaggtttccttctagtccggtgggatatcttgcgccatattttaagggatatttgggcta 834  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||    
T  43505669 tgacttgattttctcttggtggttctctccttttaagtcacaggtttccttctagtccggt-ggatatctcgcgccatattttaa-ggatattt-ggcta 43505573  T
Q  835 gggattctttaacacaaccatgtactcgctattttactcggaccctattcggattggtcagtccgggatcatgtcgaagtacggaaaggtgccatccaag 934  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  43505572 gggattctttaacacaaccatgtagtcgctattttactcagaccctattcggattggtcagtcccggatcatgtcg-agtacgggaaggtgccatccaag 43505474  T
Q  935 tattagaatgtcgggtcactaaagccttctagttctaactgaggctaggccaaatctccgtgcaggtcgacaaccttcgaacatgagtgcctccaaagaa 1034  Q
    |||||||||||||||||||||||||||||||||||||||||||   || | |||||| ||||   ||||||||||||| ||||||||| ||||||||| |    
T  43505473 tattagaatgtcgggtcactaaagccttctagttctaactgagctaagtcaaaatct-cgtgacagtcgacaaccttcaaacatgagt-cctccaaagga 43505376  T
Q  1035 gagatgcttagaggtgcgtgggtccgtcacacgtgtgggttgggaatggaa 1085  Q
     ||||||||||| |||||||| || ||||   |||||||||||||||||||    
T  43505375 aagatgcttaga-gtgcgtggttcggtcaacagtgtgggttgggaatggaa 43505326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 403553 - 403443
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagt 455  Q
    ||||||||||||||| ||| |||||| | |  ||||||||||||||||||||||||||||||||||||||||| || |||| || |||||||| |||||     
T  403553 caacttattttcataagttttccaatgtcggctataaaaacaatttaacgttattttatcttttgctataaaagtaacttacgcaagcttatagataagc 403454  T
Q  456 gcttatcatga 466  Q
    | |||||||||    
T  403453 gtttatcatga 403443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 50681168 - 50681293
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||| | ||||||||||||||| ||  |||||||||||||  ||||||||||||  ||  |||||||||||| |  |    
T  50681168 aaaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatgataagttcttgtgctataagctata 50681267  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    ||||||||||||||||||||| ||||    
T  50681268 aataagttgtttatccaaacaagccc 50681293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 394 - 467
Target Start/End: Original strand, 15177284 - 15177357
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  15177284 aacaatttaacgttattttatctttagctattaaaatagcttatgcaagcttatacatacgtgcttatcatgat 15177357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 391 - 520
Target Start/End: Original strand, 45935299 - 45935423
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaa 490  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||| | ||    | ||| ||| |||||||| ||||||    
T  45935299 aaaaacaaattaacgttaattaatcttttgctataaacatagcttatgcaagcttatacataagtg-tgat----aagcgcttgagctataagctgcaaa 45935393  T
Q  491 taagttgtttatccaaacatgcccataatt 520  Q
    ||||||||||||||||||| |||| |||||    
T  45935394 taagttgtttatccaaacaggcccttaatt 45935423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 391 - 464
Target Start/End: Complemental strand, 41336751 - 41336679
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat 464  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  41336751 aaaaacaatttaactttattttatcttt-gctataaaaatagcttatgcaagcctatacataagtgcttatcat 41336679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 356 - 509
Target Start/End: Original strand, 44863006 - 44863151
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagt 455  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||          ||||||     
T  44863006 caacttatttgcataagttctacaatttagcttataaaaacaatttaatgttatcttacctttttctataaaaatagcttatg----------cataagc 44863095  T
Q  456 gcttatcatg--atgcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
     |||||||||  | | | |||||||||||| |||||||||||||||||||||||||    
T  44863096 acttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 15173382 - 15173493
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaat 491  Q
    ||||||||| ||||||||||||||| ||||| ||| |||||||||| |||||||||||| | ||||||||||||  |||||||||||| ||| || ||||    
T  15173382 aacaatttatcgttattttatctttagctattaaagtagcttatgcaagcttatacatatgcgcttatcatgataagcgtttgtgctacaagctgaaaat 15173481  T
Q  492 aagttgtttatc 503  Q
    ||| | ||||||    
T  15173482 aagctatttatc 15173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 54069496 - 54069564
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  54069496 aaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctt 54069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 25904289 - 25904413
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa----gtgcttatcatgat--gcgtttgtgctataagt 484  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||||||  |||||||| ||||     |||||||||||||  | | |||||||||||      
T  25904289 aaaatcaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcttgtgctataatc 25904388  T
Q  485 tgcaaataagttgtttatccaaaca 509  Q
    ||||||| |||||||||||||||||    
T  25904389 tgcaaatgagttgtttatccaaaca 25904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 42404077 - 42404145
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  42404077 aaaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataagtgctt 42404145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 397 - 467
Target Start/End: Complemental strand, 31851439 - 31851369
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||| |||||||||| |||| ||||||||||||||||| |||||| ||||||| |||||||||||||    
T  31851439 aatttaactttattttatcatttgttataaaaatagcttatgtgagcttctacataaatgcttatcatgat 31851369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 39603526 - 39603592
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgc 457  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| | ||||||    
T  39603526 aaaaacaatttaacgttattttatcttttgacataaaaatagcttatgcgaacttatatacaagtgc 39603592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 44797877 - 44797763
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||      | | ||||   |||| ||||||   || |||||||||||||||||    
T  44797877 aaaatcaatttaacgttgttttatcttttgctataaaaatagcttatgc------aaatataatctcttaccatgataatcgcttgtgctataagttgca 44797784  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  44797783 aataagttgtttatccaaaca 44797763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 17204129 - 17204009
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 488  Q
    ||||||||| |||| |||||||| | ||||||||||||| ||||||||  |||| | ||||||| | ||||| ||||  ||  |||| ||||||| ||||    
T  17204129 aaaaacaatataactttattttaacatttgctataaaaacagcttatgtaagctaacacataagcggttatcgtgataagtgcttgttctataagctgca 17204030  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  17204029 aataagttgtttatccaaaca 17204009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 31076465 - 31076528
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    ||||||| |||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  31076465 aaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataag 31076528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 19494905 - 19494785
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 488  Q
    |||||||||||| | |||||||||| ||||||||| || |||||||||  | |||||||||| |||||||||||||   ||  |||||||||||| | |     
T  19494905 aaaaacaatttagctttattttatcatttgctatagaactagcttatgtaaccttatacataggtgcttatcatgaaaagtacttgtgctataagctccg 19494806  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||| |||||||| |||||    
T  19494805 aataagatgtttatctaaaca 19494785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 33587044 - 33587101
Alignment:
Q  402 aacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  33587044 aacgttgttttatctttcgctataaaaatagcttatgcaagcttatacataagcgctt 33587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 507
Target Start/End: Complemental strand, 3155594 - 3155486
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||||||||||| |||||||          |||||||||  |||||||||||||  ||| |||| ||||||| ||||    
T  3155594 aaaaacaatttaactttattttatcttttgctatagaaatagc----------ttatacatacatgcttatcatgataagcgcttgtactataagctgca 3155505  T
Q  489 aataagttgtttatccaaa 507  Q
     ||||||||||||||||||    
T  3155504 gataagttgtttatccaaa 3155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 22030194 - 22030119
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||| ||| |||| |||||||||| ||| ||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  22030194 aaaaataatataactttattttatccttt-ctatagaaatagcttatgtgagcttatacataagcgcttatcatgat 22030119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 1242354 - 1242426
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    ||||||| |||||||||||| |||||    
T  1242354 aaaaataatttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgat 1242426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 395 - 514
Target Start/End: Original strand, 50662815 - 50662926
Alignment:
Q  395 acaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaata 492  Q
    |||||||||| |||||||||||| |||||||||||||||||||          ||||||  ||| ||||||||  ||  ||||| |||||| ||||||||    
T  50662815 acaatttaacattattttatcttatgctataaaaatagcttat----------acataaacgctcatcatgataagctcttgtgatataagctgcaaata 50662904  T
Q  493 agttgtttatccaaacatgccc 514  Q
    ||||||||||||||||||||||    
T  50662905 agttgtttatccaaacatgccc 50662926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 29388605 - 29388528
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgc-gagcttatacataagtgcttatcatgat 467  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||| ||  |||||||  ||||| ||||||||||||    
T  29388605 aaaaacaatttaacgttatcttatcttttgttataaaaagagcttaggcaaagcttatttataagcgcttatcatgat 29388528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 472 - 509
Target Start/End: Original strand, 47119097 - 47119134
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47119097 ttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 51630101 - 51630058
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagctt 435  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  51630101 aaaacaatttaactttattttatcttttgctatataaatagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 388 - 459
Target Start/End: Complemental strand, 54426039 - 54425968
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||| ||||||||||  ||||||||||||  ||||| |||| |||||||||| |||||||||||||| ||||    
T  54426039 tatataaacaatttagtgttattttatctgctgctacaaaagtagcttatgcaagcttatacataagcgctt 54425968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 256920 - 256858
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| | || |||||||| ||||    
T  256920 aaaaacaatttaacattatattatcttttggtataaaaatagctgaagcaagcttatatataa 256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 402
Target Start/End: Original strand, 7839383 - 7839429
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaattta 402  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||    
T  7839383 caacttattttcgtaagttcttcaatctagcttataaaaacaattta 7839429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 55941027 - 55941061
Alignment:
Q  135 taaattatgtaattttcttaaattattattggtgt 169  Q
    |||||||||||||||||||||||||||||||||||    
T  55941027 taaattatgtaattttcttaaattattattggtgt 55941061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 436
Target Start/End: Complemental strand, 17884059 - 17884014
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagctta 436  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||    
T  17884059 aaaaacaatttaactttattttatcttttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 514
Target Start/End: Original strand, 46592286 - 46592414
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagtt 485  Q
    ||||||| ||||||| ||| |||| || ||||||||||||||||||| |||| ||||||| |||| |  |||||||| ||  | | ||||||| |||| |    
T  46592286 tataaaatcaatttaccgtcatttaattttttgctataaaaatagctcatgctagcttatgcataggcacttatcattataagtgcttgtgctttaagct 46592385  T
Q  486 gcaaataagttgtttatccaaacatgccc 514  Q
    | ||||||| || |||| |||||| ||||    
T  46592386 gtaaataagctggttatacaaacaggccc 46592414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 437515 - 437558
Alignment:
Q  395 acaatttaacgttattttatcttttgctat-aaaaatagcttat 437  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  437515 acaatttaactttattttatcttttgctataaaaaatagcttat 437558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 392 - 431
Target Start/End: Original strand, 13216284 - 13216323
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaata 431  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  13216284 aaaacgatttaactttattttatcttttgctataaaaata 13216323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 2703023 - 2702985
Alignment:
Q  399 tttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  2703023 tttaactttattttatcttttgctatataaatagcttat 2702985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 503
Target Start/End: Original strand, 3070053 - 3070166
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    ||||||| ||||| |||||| ||  |||| |||||||||| ||||||  |||||||| || |||| |||||||||   | || |||| | ||||||| ||    
T  3070053 aaaacaagttaactttatttgattatttgttataaaaataacttatgtaagcttatatatgagtgtttatcatgacaagtgtatgtgttgtaagttgtaa 3070152  T
Q  490 ataagttgtttatc 503  Q
    ||||||||||||||    
T  3070153 ataagttgtttatc 3070166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 7601750 - 7601704
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |||||||||| |||||||||  ||||||||||    
T  7601750 aaaaacaatttaactttattttatcctttgctataggaatagcttat 7601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 398
Target Start/End: Complemental strand, 9760484 - 9760446
Alignment:
Q  360 ttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaa 9760446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 434
Target Start/End: Complemental strand, 25885849 - 25885807
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagct 434  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||    
T  25885849 aaaacaatttaactttattttatcttttgctatagaaagagct 25885807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 398
Target Start/End: Original strand, 40831059 - 40831093
Alignment:
Q  364 tttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||| |||||||||||||||||||||||||||    
T  40831059 tttcataagttctccaatctagcttataaaaacaa 40831093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 461
Target Start/End: Original strand, 40831114 - 40831184
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    |||| ||||||| ||| |||| |||||||||||| ||| || ||||||| ||||||| |||||| ||||||    
T  40831114 aaaaccaatttagcgtcatttcatcttttgctattaaagtaccttatgcaagcttattcataagcgcttat 40831184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 41336901 - 41336815
Alignment:
Q  262 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagc 348  Q
    |||||||||||||||||| ||  ||| |||||||||||||  |||||| || |||   ||||| | ||||||| |||||||||||||    
T  41336901 gacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagc 41336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 51044506 - 51044584
Alignment:
Q  360 ttattttcatatgttctccaatctagcttataaaaacaa-tttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||| |||||| |   |||||||| ||||||| ||| || ||||||||||||||| |||| |||||||||||    
T  51044506 ttattttcataagttctctaggatagcttatgaaaacaagtttgactttattttatcttttgttatagaaatagcttat 51044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 55414499 - 55414573
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatg 465  Q
    ||||| || ||||| |||||||||||||| | ||| |||||||||||||  ||||||| |||||  |||||||||    
T  55414499 aaaaaaaaattaactttattttatcttttccaatagaaatagcttatgcacgcttataaataagaacttatcatg 55414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 3175941 - 3175896
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || |||||||||||||||||||| || ||||||||    
T  3175941 aaaacaatttgactttattttatcttttgctatagaagtagcttat 3175896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 4212850 - 4212813
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| || ||||||||||||||||||||||    
T  4212850 ttgtgctataagctgaaaataagttgtttatccaaaca 4212813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 9760431 - 9760362
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctta 460  Q
    ||||| |||||||| |||||||||||||| | ||||||||| ||||||  ||||||| || | |||||||    
T  9760431 aaaaagaatttaactttattttatctttttcaataaaaataacttatgaaagcttatgcaaatgtgctta 9760362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 15173232 - 15173317
Alignment:
Q  262 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataag 347  Q
    |||||||||||  ||||| || |||| |||||||||||||||||| |||||   |  |||||||| ||||||| | ||||||||||    
T  15173232 gacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataag 15173317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Original strand, 27330187 - 27330224
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| | |||||||||||||||||||||||    
T  27330187 ttgtgctataagctacaaataagttgtttatccaaaca 27330224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 33586978 - 33587019
Alignment:
Q  357 aacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    |||||||||||||| ||||||| || ||||||||||||||||    
T  33586978 aacttattttcataagttctccgatatagcttataaaaacaa 33587019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 42321959 - 42322004
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || |||||||||| |||| ||||||||||||||||    
T  42321959 aaaacaatttgactttattttatcatttgttataaaaatagcttat 42322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 49202564 - 49202527
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  49202564 ttgtactataagctgcaaataagttgtttatccaaaca 49202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 49803201 - 49803156
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| | |||||||||||||||||| ||||| |||||    
T  49803201 aaaacaatttaacttcattttatcttttgctatagaaataacttat 49803156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Original strand, 54069440 - 54069481
Alignment:
Q  357 aacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    |||||||||||||||||||| |||| || |||||||||||||    
T  54069440 aacttattttcatatgttcttcaatataacttataaaaacaa 54069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 1e-38; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 14956374 - 14956499
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  14956374 aaaaacaatttaatgttatttcatcttttacaataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgca 14956473  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    ||||||||||||||||||||| ||||    
T  14956474 aataagttgtttatccaaacaagccc 14956499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 9130386 - 9130506
Alignment:
Q  391 aaaaacaatttaacgttattttat---cttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatg--cgtttgtgctataagtt 485  Q
    |||||| |||||||||||||||||   |||| |||| |||||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||| |    
T  9130386 aaaaaccatttaacgttattttattatctttagctacaaaaatagcttatgcgagcttatacataagtgattatcatgatgaccacttgtgctataagct 9130485  T
Q  486 gcaaataagttgtttatccaa 506  Q
    ||||||||| | |||||||||    
T  9130486 gcaaataagctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 1058153 - 1058278
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat--gatgcgtttgtgctataagttgca 488  Q
    |||||||  ||||| |||||||||  ||||||||||||||||||||||  |||||||||||||| |||||||||   | ||| |||||||||||| ||||    
T  1058153 aaaaacagattaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttgtgctataagctgca 1058252  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||| ||||||| |||||| ||||    
T  1058253 aataagctgtttattcaaacaggccc 1058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 12976198 - 12976087
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgcaaataag 494  Q
    |||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||   ||||||   || ||||||||||    
T  12976198 aatttaactttattttatattttgctatagaaatagcttatgtgagcttatacataagcgcttatcatgatgagtgcctgtgct---agctgcaaataag 12976102  T
Q  495 ttgtttatccaaaca 509  Q
     ||||||||||||||    
T  12976101 ctgtttatccaaaca 12976087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 390 - 515
Target Start/End: Complemental strand, 28763360 - 28763238
Alignment:
Q  390 taaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgc 487  Q
    ||||| |||||||||||||||||     |||||||||||||||| ||||| ||| ||||||||| | |||||||||||  | |||| ||||||||||| |    
T  28763360 taaaagcaatttaacgttatttt-----ttgctataaaaatagcctatgccagcatatacataaattcttatcatgataagtgtttatgctataagttac 28763266  T
Q  488 aaataagttgtttatccaaacatgccca 515  Q
    ||||||| ||||||| |||||| |||||    
T  28763265 aaataagctgtttatacaaacaggccca 28763238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 12497310 - 12497372
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  12497310 aaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa 12497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 32976040 - 32975978
Alignment:
Q  402 aacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat 464  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  32976040 aacgttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcat 32975978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 38750349 - 38750229
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||||| |||||| ||||||| ||| |  ||||||||||||||||||| |||||||||||||| ||||||||||||  | |  ||| ||  ||| | ||    
T  38750349 aaaaacattttaacattattttttctctgcctataaaaatagcttatgcaagcttatacataagcgcttatcatgataagtgcatgtacttcaagcttca 38750250  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  38750249 aataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 41475140 - 41475248
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||          |||||||||||||||||||   | ||||||  ||||||||||||    
T  41475140 aaaacaatttaactgtattttatcttttgctataaaattagcttat----------acataagtgcttatcatgacaagtgtttgtcttataagttgcaa 41475229  T
Q  490 ataagttgtttatccaaac 508  Q
    |||||||||||||||||||    
T  41475230 ataagttgtttatccaaac 41475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 503
Target Start/End: Complemental strand, 15180532 - 15180418
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| ||||||||| ||  |||||||||||| || ||||| ||||||| | |||||| |||||| || ||||||||  ||| |||||||||||| | ||    
T  15180532 aaaaataatttaacgatacgttatcttttgctgtacaaataacttatgcaaacttatagataagttctcatcatgatacgcgcttgtgctataagcttca 15180433  T
Q  489 aataagttgtttatc 503  Q
    |||||||||||||||    
T  15180432 aataagttgtttatc 15180418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 42043424 - 42043495
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatc 462  Q
    ||||||||||||||   |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  42043424 aaaaacaatttaactgcattttatcttttgctatagaaatagcatatgtaagcttatacataagtgcttatc 42043495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 35534690 - 35534813
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||  ||||||| ||| || |||||| |||||   ||  ||||||||||| ||||    
T  35534690 aaaaacaatttaactttattttatctttt-ctataaaaatatcttatgtaagcttatgcat-agcgcttataatgataaacgcctgtgctataagctgca 35534787  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||| ||||| |||||||| ||||    
T  35534788 aataagctgtttttccaaacaggccc 35534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 406 - 509
Target Start/End: Original strand, 36963439 - 36963544
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    |||||||||||||||||| | |||||||||| |  ||||||| | |||| | ||||||||||  ||| |||||||||||| ||||||||| ||||||| |    
T  36963439 ttattttatcttttgctagagaaatagcttaagaaagcttatccgtaagcgtttatcatgataagcgcttgtgctataagctgcaaataaattgtttacc 36963538  T
Q  504 caaaca 509  Q
    ||||||    
T  36963539 caaaca 36963544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 401 - 467
Target Start/End: Complemental strand, 38353330 - 38353265
Alignment:
Q  401 taacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||    
T  38353330 taacattattttatcttttgc-ataaaaatagcttatgcaagcttatacataagcgattatcatgat 38353265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 406 - 508
Target Start/End: Original strand, 29168146 - 29168250
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||  ||| | |||||   || |||||||||||| |||| ||||  ||| ||||    
T  29168146 ttattttatcttttgctatagaaatagcttatgtgagcttatacataagcacttttgatgataaacgcttgtgctataagctgcagataacctgtgtatc 29168245  T
Q  504 caaac 508  Q
    |||||    
T  29168246 caaac 29168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 16825616 - 16825684
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||||||||||||| |||||||||| ||| |||||| |||||||||||| || ||||||||||| ||||    
T  16825616 aaaaacaatttaacattattttatcctttactataagaatagcttatgcaaggttatacataagcgctt 16825684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 447 - 509
Target Start/End: Original strand, 900821 - 900886
Alignment:
Q  447 tacataagtgcttatcatgat--gcgtttgtgctataagttgcaaata-agttgtttatccaaaca 509  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||||| |||||||||||||||||    
T  900821 tacataagtgtttatcatgataagcgtttgtgctataagatgcaaatatagttgtttatccaaaca 900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 442 - 509
Target Start/End: Complemental strand, 34236112 - 34236043
Alignment:
Q  442 gcttatacataagtgcttatcatgatg--cgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||| |||||| ||||||||||||   |||||||| |||||| |||||||||||||||||||||||||    
T  34236112 gcttatccataagggcttatcatgataaccgtttgtgttataagctgcaaataagttgtttatccaaaca 34236043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 35644061 - 35644123
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    |||||||||||||| || |||||||||||| | |||||||||||| || ||||||||||||||    
T  35644061 aaaacaatttaacggtaatttatcttttgccagaaaaatagcttaagcaagcttatacataag 35644123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 6525809 - 6525753
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttat 447  Q
    ||||| ||||||| |||||||||  |||||||||||||||||||||||| |||||||    
T  6525809 aaaaataatttaatgttattttagtttttgctataaaaatagcttatgcaagcttat 6525753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 10758335 - 10758411
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||| |||||||||  ||||||||| |||||| ||| | ||||||||||||||   |||||||||||    
T  10758335 aaaaacaatttaactttattttatgatttgctatagaaatagtttacgtgagcttatacataatcacttatcatgat 10758411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 11861789 - 11861733
Alignment:
Q  400 ttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtg 456  Q
    ||||| ||||||| |  ||||||||| |||||||||||| |||||||||||||||||    
T  11861789 ttaactttattttgttctttgctatagaaatagcttatgtgagcttatacataagtg 11861733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 41821528 - 41821472
Alignment:
Q  411 ttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||||||| |||||| || ||| || || |||||||||||||||||||||||||||    
T  41821528 ttatctttttctataataacagcgtacgcaagcttatacataagtgcttatcatgat 41821472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 26215447 - 26215377
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||| ||||||||| ||  ||| | |||||||||| || ||||||||||||||| ||||||    
T  26215447 agcttatacataagcgcttatcattataagcgctcgtgctataagctgaaaataagttgtttatacaaaca 26215377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 400 - 467
Target Start/End: Complemental strand, 30151120 - 30151050
Alignment:
Q  400 ttaacgttattttatcttttgctata-aaaatagcttatgcgagcttatacataagt--gcttatcatgat 467  Q
    ||||| |||||||||||| | ||||| |||||||||||||| |||||||| ||||||  ||||||||||||    
T  30151120 ttaactttattttatcttatactatagaaaatagcttatgcaagcttataaataagtgggcttatcatgat 30151050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 466 - 509
Target Start/End: Complemental strand, 38602283 - 38602240
Alignment:
Q  466 atgcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||    
T  38602283 atgcgtttgtgttataagctgcaaataagatgtttatccaaaca 38602240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 42052033 - 42051982
Alignment:
Q  402 aacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    |||||| |||| | |||||||||||||| ||||||||| |||||||||||||    
T  42052033 aacgttttttttttttttgctataaaaagagcttatgcaagcttatacataa 42051982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 16736075 - 16736029
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||| |||||| |||||||||||||||||||| ||||||| ||||    
T  16736075 aaaaactatttaatgttattttatcttttgctatcaaaatagtttat 16736029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 20672795 - 20672729
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctata 425  Q
    |||||||||||| | ||||||   ||||||||||||||| ||| || ||||||||||||||| ||||    
T  20672795 cttattttcataagctctccaggatagcttataaaaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 475 - 509
Target Start/End: Original strand, 29819045 - 29819079
Alignment:
Q  475 tgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||| |||||||||||||||||||||||||    
T  29819045 tgctataagctgcaaataagttgtttatccaaaca 29819079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 433
Target Start/End: Complemental strand, 1112843 - 1112802
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagc 433  Q
    ||||||||||||| ||||||||||||||| |||| |||||||    
T  1112843 aaaacaatttaaccttattttatcttttgttatagaaatagc 1112802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 3537111 - 3537156
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || |||||||||||||||||||| |||| ||||||    
T  3537111 aaaacaatttgactttattttatcttttgctatagaaattgcttat 3537156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 10114479 - 10114435
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||| ||| |||||||||||||||||||| |||||||||||    
T  10114479 aaaacaattcaac-ttattttatcttttgctatagaaatagcttat 10114435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 30657798 - 30657835
Alignment:
Q  360 ttattttcatatgttctccaatctagcttataaaaaca 397  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaaca 30657835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 34201061 - 34201110
Alignment:
Q  126 taattactttaaattatgtaattttcttaaattattattggtgtcaatgt 175  Q
    ||||||| || |||||||| ||||||| ||||||||||| ||||||||||    
T  34201061 taattacattgaattatgtcattttctcaaattattattagtgtcaatgt 34201110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 409 - 487
Target Start/End: Original strand, 35749661 - 35749741
Alignment:
Q  409 ttttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgc 487  Q
    ||||||||||||||||| ||||||  ||||| | |||||||| || ||||||| |||||  | |||| |||||||||||||    
T  35749661 ttttatcttttgctatagaaatagtctatgcaaacttatacaaaaatgcttattatgataagtgtttatgctataagttgc 35749741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 40981038 - 40981001
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  40981038 ttgtgctataagctgcaaataagctgtttatccaaaca 40981001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 429
Target Start/End: Original strand, 42237502 - 42237539
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaa 429  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  42237502 aaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 42597391 - 42597346
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || ||||||||||||||| |||| |||||||||||    
T  42597391 aaaacaattttactttattttatcttttgttatagaaatagcttat 42597346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 4e-32; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 391 - 511
Target Start/End: Original strand, 30956705 - 30956827
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||| |||||||||||||  ||  |||||||||||| ||||    
T  30956705 aaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgca 30956804  T
Q  489 aataagttgtttatccaaacatg 511  Q
    |||||| ||||||||||||||||    
T  30956805 aataagctgtttatccaaacatg 30956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 391 - 511
Target Start/End: Original strand, 30972517 - 30972639
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||| |||||||||||||  ||  |||||||||||| ||||    
T  30972517 aaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgca 30972616  T
Q  489 aataagttgtttatccaaacatg 511  Q
    |||||| ||||||||||||||||    
T  30972617 aataagctgtttatccaaacatg 30972639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 356 - 466
Target Start/End: Complemental strand, 35696286 - 35696176
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagt 455  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || || | ||||| |||     
T  35696286 caacttattttcacaagttctccaatatagcttataaaaacaatttaatgttagtttatcttttgctataaaaatagcttacgcaagttcatacaaaagc 35696187  T
Q  456 gcttatcatga 466  Q
     ||||||||||    
T  35696186 acttatcatga 35696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 391 - 516
Target Start/End: Original strand, 35959535 - 35959662
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| |||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||||||  |||||||||||  | | ||||| |||||| ||||    
T  35959535 aaaaataatttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgatataagctgca 35959634  T
Q  489 aataagttgtttatccaaacatgcccat 516  Q
    |||||| |||||||||||||| ||||||    
T  35959635 aataagctgtttatccaaacaagcccat 35959662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 29520561 - 29520664
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaat 491  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||  | |||| ||||||||| ||||||     
T  29520561 aacaatttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatgataagtgtttatgctataagctgcaaaa 29520659  T
Q  492 aagtt 496  Q
    |||||    
T  29520660 aagtt 29520664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 397 - 508
Target Start/End: Original strand, 1508665 - 1508779
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaa-tagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataa 493  Q
    ||||||||  |||||||||||||||| |||||| ||| |||||| |||||||||||||| ||||||||||||  ||  ||||||||||||||||||||||    
T  1508665 aatttaacaatattttatcttttgctttaaaaaatagtttatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataa 1508764  T
Q  494 gttgtttatccaaac 508  Q
    | ||||| |||||||    
T  1508765 gctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 391 - 515
Target Start/End: Complemental strand, 20880467 - 20880342
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| || ||||||| ||||||||||||||||||||||  ||||||||||||||  ||||| |||||   || |||||||||||  ||||    
T  20880467 aaaaacaatttaac-ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagcacttattatgataaccgcttgtgctataaactgca 20880369  T
Q  489 aataagttgtttatccaaacatgccca 515  Q
    |||||||||| |||||||||| |||||    
T  20880368 aataagttgtctatccaaacaggccca 20880342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 39980720 - 39980610
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||||||||| ||| || ||||||||||| |||| |||| | |||||||||||||||||||||||||  | |||||| ||||||| ||||    
T  39980720 aaaaacaatttaacgttattgtatgttctgctataaaaaaagctaatgcaaacttatacataagtgcttatcatgataagtgtttgtcctataagctgca 39980621  T
Q  489 aataagttgtt 499  Q
    |||||| ||||    
T  39980620 aataagctgtt 39980610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 5331281 - 5331178
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaat 491  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| || ||  | |||| ||||||||| ||||||     
T  5331281 aacaatttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatcataagtgtttatgctataagctgcaaaa 5331183  T
Q  492 aagtt 496  Q
    |||||    
T  5331182 aagtt 5331178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 2719459 - 2719341
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    |||||||||| || ||||||||| ||||||| || ||||||||| ||  ||||||| | |||||||||||||||||  |||||||||||||||| || ||    
T  2719459 aaaacaatttcactttattttatattttgctttagaaatagcttgtgtaagcttatgcgtaagtgcttatcatgataagcgtttgtgctataagctgtaa 2719360  T
Q  490 ataagttgtttatccaaac 508  Q
    ||||| ||||||| |||||    
T  2719359 ataagctgtttattcaaac 2719341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 392 - 496
Target Start/End: Original strand, 46778307 - 46778413
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||   |||| ||||||||| ||||||||||||  | |||||| ||||||| |||||    
T  46778307 aaaacaatttaactttattttatctcttgctatagaaatagcttatataagctgatacataagcgcttatcatgataagtgtttgtactataaggtgcaa 46778406  T
Q  490 ataagtt 496  Q
    |||||||    
T  46778407 ataagtt 46778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 20170514 - 20170389
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| ||| |||| ||||||||| |||||||||||   ||  ||||| |||||  ||||    
T  20170514 aaaaacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatgaaaagcagttgtgatataaactgca 20170415  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||||||||| ||| |||| ||||    
T  20170414 aataagttgtttctcccaacaggccc 20170389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 392 - 464
Target Start/End: Original strand, 12862327 - 12862399
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat 464  Q
    ||||||||||||   |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  12862327 aaaacaatttaaatctattttatcttttgctataaaaatagattatgcaagcttaaacataagtgcttatcat 12862399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 24684902 - 24685027
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcg--tttgtgctataagttgca 488  Q
    |||||||||| ||  |||||||||||||| ||||||||||||||||||  | ||||| || ||| ||||||||||||| |  ||||||||||||| ||||    
T  24684902 aaaaacaattaaaatttattttatctttttctataaaaatagcttatgtaaacttatgcaaaagcgcttatcatgatgagaatttgtgctataagctgca 24685001  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||   || |||||||||| ||||    
T  24685002 aataaaccgtctatccaaacaggccc 24685027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 36631130 - 36631250
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| ||| |||||| ||| ||||| |||||||||| ||||| |||||||||| |||||||||||||  ||  |||||||||    || |    
T  36631130 aaaaacaatttaactttactttatcctttactatagaaatagcttaagcgagtttatacataattgcttatcatgataagcacttgtgctattgtctgaa 36631229  T
Q  489 aataagttgtttatccaaaca 509  Q
    ||||||||||| |||||||||    
T  36631230 aataagttgttaatccaaaca 36631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 394 - 452
Target Start/End: Original strand, 29520413 - 29520470
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacata 452  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  29520413 aacaatttaacgttatgttatcttttgct-taaaaatagcttatgcaagcttatacata 29520470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 359 - 503
Target Start/End: Original strand, 28795878 - 28796025
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataa---aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagt 455  Q
    |||||||||||| |||||| ||| |||||||||    |||||||  ||| |||||||||| ||  || ||||||||| ||| |  |||||||||||||||    
T  28795878 cttattttcataagttctctaatatagcttatagcgtaaacaat--aacattattttatccttccctttaaaaatagtttaggtaagcttatacataagt 28795975  T
Q  456 gcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    | ||||||||||    |||||||||||||| || ||||||||||||||||    
T  28795976 gtttatcatgataaatgtttgtgctataagctgtaaataagttgtttatc 28796025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 431 - 505
Target Start/End: Original strand, 31365391 - 31365467
Alignment:
Q  431 agcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatcca 505  Q
    ||||||||| |||||||||||||||||||||||||||   |  |||||||||||| |||||||||| ||||||||||    
T  31365391 agcttatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatcca 31365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 51929439 - 51929503
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgc-gagcttatacataag 454  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  51929439 aaaaacaatttaatgctattttatcttttgctataaaaatatcttatgcaaagcttatacataag 51929503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 392 - 509
Target Start/End: Original strand, 53789541 - 53789660
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    |||||| |||||  ||| || ||||||| ||||| ||||||||||||  |||||| ||||||||||||||||||||  ||| |||||  ||||| |||||    
T  53789541 aaaacattttaattttagttcatcttttcctatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaa 53789640  T
Q  490 ataagttgtttatccaaaca 509  Q
     ||||| ||||| |||||||    
T  53789641 ttaagtcgtttacccaaaca 53789660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 7814218 - 7814290
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    ||||||| |||||||||||| |||||    
T  7814218 aaaaataatttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgat 7814290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 5331429 - 5331372
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacata 452  Q
    |||||||||||||||| || ||||||||| |||||||||||||||| ||||||||||||    
T  5331429 aacaatttaacgttatgttctcttttgct-taaaaatagcttatgcaagcttatacata 5331372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 44061102 - 44061148
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  44061102 aaaaacaatttaaccttattttatcttttgctatagaaatagcttat 44061148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 406 - 467
Target Start/End: Complemental strand, 37689209 - 37689148
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||||||||| |||||||||||| || ||||||| ||||  |||||||||||    
T  37689209 ttattttatcttttgctatagaaatagcttatgtgaacttatacgtaagcacttatcatgat 37689148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 468 - 509
Target Start/End: Original strand, 42747909 - 42747950
Alignment:
Q  468 gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  42747909 gcgtttgtgctataagttgcaaataagctgtttatccaaaca 42747950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 10704652 - 10704708
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttat 447  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||  |||||||    
T  10704652 aaaaacaatttaacatcattttatcttttgctataaaagtagcttatgtaagcttat 10704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 470 - 509
Target Start/End: Complemental strand, 849592 - 849553
Alignment:
Q  470 gtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  849592 gtttgtgctataagctgcaaataagttgtttatccaaaca 849553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 17568696 - 17568743
Alignment:
Q  124 tgtaattactttaaattatgtaattttcttaaattattattggtgtca 171  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  17568696 tgtaattacattaaattatgtaattttctcaaattattaatggtgtca 17568743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 901972 - 901930
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  901972 caacttattttcataagttctccaatatagcttataaaaacaa 901930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 39980777 - 39980735
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  39980777 caacttattttcataagttctccaatatagcttataaaaacaa 39980735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 49034344 - 49034382
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaata 431  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  49034344 aaacaatttaacggtattttatcttttgctataaaaata 49034382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 2128331 - 2128376
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttat 2128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 15304427 - 15304472
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||    
T  15304427 aaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 42808973 - 42808924
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||||||| ||||||||||||||| |||| ||| |||||||    
T  42808973 tataaaaacaatttaactttattttatcttttgttatagaaacagcttat 42808924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 451 - 509
Target Start/End: Complemental strand, 47132308 - 47132248
Alignment:
Q  451 taagtgcttatcatgatgcgt--ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||||||  ||  |||||||||||| || ||||||||||||||||||||||    
T  47132308 taagtgcttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaaca 47132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 463
Target Start/End: Complemental strand, 584037 - 583965
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatca 463  Q
    |||||||||||||| |||||||||| ||| ||||| ||||| ||||||  ||||||||| ||||  |||||||    
T  584037 aaaaacaatttaactttattttatcattttctatagaaataacttatgtaagcttatacgtaagcacttatca 583965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 18405911 - 18405979
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    ||||| |||| |||| ||||||||||||| ||||| ||||| ||||||  |||||||||||||| ||||    
T  18405911 aaaaaaaattcaacgatattttatcttttcctatataaataacttatgtaagcttatacataagcgctt 18405979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 25447174 - 25447218
Alignment:
Q  262 gacttatttgagtttatccaccgacaaaagttttgtgagactgtt 306  Q
    |||||||||||||||||| || |||| ||||||||||||||||||    
T  25447174 gacttatttgagtttatctactgacataagttttgtgagactgtt 25447218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 34034104 - 34034037
Alignment:
Q  449 cataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||||||||||  |||  ||| ||||||| || |||||||||||||||||||||| ||||    
T  34034104 cataagtgcttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacaggccc 34034037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 392 - 483
Target Start/End: Complemental strand, 4401037 - 4400943
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctat-aaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataag 483  Q
    |||| ||||||||||||||| | |||||| ||| ||||| ||||||||| | ||||||||||||| ||||| || ||  | ||||||||||||||    
T  4401037 aaaataatttaacgttatttcaccttttggtataaaaaaaagcttatgcaaacttatacataagtacttataataataagtgtttgtgctataag 4400943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 474 - 509
Target Start/End: Complemental strand, 38902002 - 38901967
Alignment:
Q  474 gtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38902002 gtgctataagttgcaaataagctgtttatccaaaca 38901967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 471 - 509
Target Start/End: Complemental strand, 21335598 - 21335560
Alignment:
Q  471 tttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  21335598 tttgtgatataagttgcaaataagctgtttatccaaaca 21335560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 429 - 515
Target Start/End: Original strand, 42800032 - 42800118
Alignment:
Q  429 atagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgccca 515  Q
    |||||||||| ||||||||||| |  |||||| ||||||  ||| || ||||||||| | |||||||| |||| |||||||||||||||    
T  42800032 atagcttatgtgagcttatacaaa--tgcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaaacatgccca 42800118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 475 - 509
Target Start/End: Original strand, 46886852 - 46886886
Alignment:
Q  475 tgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||| |||||||||||||||||||||||||    
T  46886852 tgctataagctgcaaataagttgtttatccaaaca 46886886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 47132379 - 47132337
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  47132379 caacttattttcataacttctccaatatagcttataaaaacaa 47132337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 10101556 - 10101601
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||| |||| ||||| |||||    
T  10101556 aaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 10212481 - 10212526
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||| |||| ||||| |||||    
T  10212481 aaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 416 - 503
Target Start/End: Complemental strand, 12833956 - 12833871
Alignment:
Q  416 ttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    ||||||||||||||||||||||    ||||||| |||||||||||| |||||  ||  || ||||||||| |||| ||||||| ||||||    
T  12833956 ttttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatgctataagctgcatataagttttttatc 12833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 16790404 - 16790481
Alignment:
Q  360 ttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||| | | |||||  |||||||| |||| ||||| |  ||||||||||| ||| ||||||||||||||||    
T  16790404 ttattttcataagctatccaagatagcttatgaaaataatttgattttattttatctgttgttataaaaatagcttat 16790481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 475 - 512
Target Start/End: Complemental strand, 26911618 - 26911581
Alignment:
Q  475 tgctataagttgcaaataagttgtttatccaaacatgc 512  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  26911618 tgctacaagatgcaaataagttgtttatccaaacatgc 26911581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 30669050 - 30669095
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||| |||| ||| ||||||||||||||| ||||||||||||||||    
T  30669050 aaaaaaattcaacattattttatcttttgttataaaaatagcttat 30669095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 408 - 437
Target Start/End: Complemental strand, 32582309 - 32582280
Alignment:
Q  408 attttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||||||||||||||||||||    
T  32582309 attttatcttttgctataaaaatagcttat 32582280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 37689464 - 37689509
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||||    
T  37689464 aaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 39602291 - 39602336
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgc 439  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  39602291 aacaatttaactttatgttatctttttctatagaaatagcttatgc 39602336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 42809291 - 42809246
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||    
T  42809291 aaaacaatttaactatattttatcttttgttatagaaatagcttat 42809246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 48281030 - 48281071
Alignment:
Q  420 gctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    |||||| |||||||||||| |||||||||||||| |||||||    
T  48281030 gctatagaaatagcttatgtgagcttatacataattgcttat 48281071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 6e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 41407292 - 41407172
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| ||||||||||||||| || | ||||||||||||  |||||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  41407292 aaaaacaatttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgca 41407193  T
Q  489 aataagttgtttatccaaaca 509  Q
    || ||| ||||||||||||||    
T  41407192 aacaagctgtttatccaaaca 41407172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 392 - 504
Target Start/End: Complemental strand, 32592577 - 32592463
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||| |||||| |||||  | |||||||||||||| | |||    
T  32592577 aaaacaatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataagtgtttgtgctataagctacaa 32592478  T
Q  490 ataagttgtttatcc 504  Q
    |||||||||||||||    
T  32592477 ataagttgtttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 39659588 - 39659707
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||||||||| ||||||||| ||||||| |||  ||| | | |||||||||||| ||||||||||||  || |||||||| |||| ||||    
T  39659588 aaaaacaatttaacgttattgtatcttttgttataaaa-tagtgtatccaaacttatacataagcgcttatcatgataagcatttgtgctctaagctgca 39659686  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  39659687 aataagttgtttatccaaaca 39659707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 396 - 483
Target Start/End: Complemental strand, 26202015 - 26201925
Alignment:
Q  396 caatttaacgttattttatct-tttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataag 483  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||  ||| ||||||||||||    
T  26202015 caatttaacgttattttatctctttgctataaaaatagcttatgcaagcttatatataagggcttatcatgataagcgcttgtgctataag 26201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 15305648 - 15305522
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatg---atgcgtttgtgctataagttgc 487  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||  |||| ||||   |  || || ||||| |||||||    
T  15305648 aaaaataatttaacattattttatcatttgctataaaaatagcttatgcaagcttatacacaagcacttaccatgtataaacgcttatgctaaaagttgc 15305549  T
Q  488 aaataagttgtttatccaaacatgccc 514  Q
    ||||||| |||||||||||||| ||||    
T  15305548 aaataagctgtttatccaaacaggccc 15305522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 42659230 - 42659355
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||||||||| || |||||||| | ||| | ||||||||||||||||  |||||||||||||| ||||||||||||  | || |||||||| || ||||    
T  42659230 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatgataagtgtgtgtgctattagctgca 42659329  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    ||||||||  ||||||||||| ||||    
T  42659330 aataagtttcttatccaaacaggccc 42659355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 42420373 - 42420419
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42420373 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 42420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 42868540 - 42868637
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttg 486  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||  | ||||| |||||| || |||||||||  ||| |||||||||||||||    
T  42868540 aaaaacaatttaactttattttatctttttctatgaaaatagcttatgtaaacttatgcataagcgcctatcatgataagcgcttgtgctataagttg 42868637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 15757738 - 15757865
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag-------tgcttatcatgat--gcgtttgtgctata 481  Q
    |||||||||||||| |||||||||| ||| || || | |||||||||| |||||||||||||||        ||||||||||||  ||| ||||||||||    
T  15757738 aaaaacaatttaactttattttatcattttctttagatatagcttatgtgagcttatacataagcttttatcgcttatcatgataagcgcttgtgctata 15757837  T
Q  482 agttgcaaataagttgtttatccaaaca 509  Q
    || || ||||||| ||||||||||||||    
T  15757838 agctgaaaataagctgtttatccaaaca 15757865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 41241211 - 41241308
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttg 486  Q
    |||||||||||||| | |||||||||||| ||||| ||||||||||||  ||||||| |||||| || |||||||||  | | |||||||||||||||    
T  41241211 aaaaacaatttaacttcattttatcttttcctatagaaatagcttatgtaagcttatccataagcgcatatcatgataagtgcttgtgctataagttg 41241308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 461
Target Start/End: Complemental strand, 20933741 - 20933676
Alignment:
Q  396 caatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||| ||| |||||||||||||||||    
T  20933741 caatttaacattattttatcttttgttgtaaaaatagattatgcaagcctatacataagtgcttat 20933676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 43279606 - 43279682
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||||||||| || ||||||||||||||| |||||||||||||||||| |||||| | || || ||||| ||||||    
T  43279606 aaaaacaatttcacattattttatcttttgatataaaaatagcttatgcaagcttagaaattagcgcttaacatgat 43279682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 31744325 - 31744234
Alignment:
Q  421 ctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaataagttgtttatccaaacatgc 512  Q
    |||| |||||| |||| || |||||||||||||| ||||||||| | | | |||||||||||| | |||||||| |||||| ||||||||||    
T  31744325 ctatgaaaataacttacgcaagcttatacataagcgcttatcattaagtgcttgtgctataagctacaaataagctgtttaaccaaacatgc 31744234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 507
Target Start/End: Complemental strand, 41851526 - 41851408
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| ||||| |||||||| ||||| ||||| ||  ||  |||||||| ||||| | ||| ||||||  ||| |||||||||| | ||||    
T  41851526 aaaaacaatttaactttattgtatcttttcctatataaatatctcgtgtaagcttatatataagcgtttagcatgataagcgcttgtgctatatgctgca 41851427  T
Q  489 aataagttgtttatccaaa 507  Q
    |||||| ||||||||||||    
T  41851426 aataagatgtttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 4026808 - 4026762
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  4026808 aaaaataatttaactttattttatcttttgctataaaaatagcttat 4026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 45229503 - 45229429
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatg 465  Q
    |||||||||||||| | |||||||| ||||||||| ||||||||||||  | ||||||||||||  |||||||||    
T  45229503 aaaaacaatttaacctcattttatcgtttgctatagaaatagcttatgtaaacttatacataagcacttatcatg 45229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 12464552 - 12464672
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgc--tataagttgca 488  Q
    |||||||||||||| |||||||||||||| ||| | ||||||||||||  ||||| |||||| |  |||||||||||  ||  ||||  |||||| | ||    
T  12464552 aaaaacaatttaactttattttatctttttctacagaaatagcttatgtaagcttctacatatgcacttatcatgataagtgcgtgcgttataagctaca 12464651  T
Q  489 aataagttgtttatccaaaca 509  Q
    ||||||  |||||||||||||    
T  12464652 aataagccgtttatccaaaca 12464672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 19608744 - 19608814
Alignment:
Q  441 agcttatacataagtgcttatcatg--atgcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||||||  ||| | |||||||||||| |||||||| | ||| ||||||||||    
T  19608744 agcttatacataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaaca 19608814  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 40682492 - 40682562
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||| ||||| ||||||  ||| ||| ||||| ||||||||||||| ||||||||||||||    
T  40682492 agcttatacataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaaca 40682562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 13325560 - 13325486
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatga 466  Q
    |||| |||||||| |||||||||| ||| |||||||| |||||||||  | || ||||||||||||||| |||||    
T  13325560 aaaataatttaactttattttatcattttctataaaactagcttatgttacctcatacataagtgcttaacatga 13325486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 41812169 - 41812231
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    |||||||||||||| | |||||| | ||||| ||||||||||||||||  |||||||||||||    
T  41812169 aaaaacaatttaacttcattttaccatttgccataaaaatagcttatgtaagcttatacataa 41812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 427 - 505
Target Start/End: Complemental strand, 11863886 - 11863806
Alignment:
Q  427 aaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatcca 505  Q
    ||||||||||||  ||||||| |||||| |||||||||||   | ||||||||| |||| || ||||||||||||||||||    
T  11863886 aaatagcttatgtaagcttatgcataagcgcttatcatgacaagtgtttgtgctgtaagctgaaaataagttgtttatcca 11863806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 1875117 - 1875069
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgc 439  Q
    |||| |||||||| |||||||||||||||||||||| ||||||| ||||    
T  1875117 aaaagcaatttaatgttattttatcttttgctataacaatagctaatgc 1875069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 23974571 - 23974640
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatc 462  Q
    |||| |||||||||  |||||| |||||| |||||||||||||||| |  ||||||| ||||||||||||||    
T  23974571 aaaagcaatttaac--tattttgtctttttctataaaaatagcttaagtaagcttatgcataagtgcttatc 23974640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 31561832 - 31561908
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||| |||||||||| |||  |||| | ||||||||||  ||||||||  |||| ||||||||||||    
T  31561832 aaaaacaatttaactttattttatcatttattatagatatagcttatgtaagcttatatgtaagcgcttatcatgat 31561908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 473 - 509
Target Start/End: Complemental strand, 40835471 - 40835435
Alignment:
Q  473 tgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||| |||||||||||||||||||||||||    
T  40835471 tgtgctataagctgcaaataagttgtttatccaaaca 40835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 472 - 515
Target Start/End: Complemental strand, 2416231 - 2416188
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccca 515  Q
    |||||||||||| || ||||||||||||||||||||||| ||||    
T  2416231 ttgtgctataagctgaaaataagttgtttatccaaacatcccca 2416188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 468 - 503
Target Start/End: Original strand, 27317269 - 27317304
Alignment:
Q  468 gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    |||||||||||||||| |||||||||||||||||||    
T  27317269 gcgtttgtgctataagctgcaaataagttgtttatc 27317304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 455 - 507
Target Start/End: Original strand, 27695730 - 27695784
Alignment:
Q  455 tgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    |||||||||||||  | |||||||||||||| | |||||||||||||||||||||    
T  27695730 tgcttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 348
Target Start/End: Complemental strand, 30331909 - 30331806
Alignment:
Q  245 tagggcatatttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcat 344  Q
    |||||| | |||| || ||||||||| || ||||| || |||| |||||||||||||||||| ||||| |||  |||||| | ||||||| | ||||||     
T  30331909 tagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcac 30331810  T
Q  345 aagc 348  Q
    ||||    
T  30331809 aagc 30331806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 434
Target Start/End: Complemental strand, 36114410 - 36114367
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagct 434  Q
    |||||||||||||| |||||||||||||||  ||||||||||||    
T  36114410 aaaaacaatttaactttattttatcttttgtcataaaaatagct 36114367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 38010397 - 38010283
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataag 494  Q
    |||||||| ||||||||||||||  |||| ||| | |||| |  |||||| || |||| || |||||||||  ||  ||||| |||||| ||||||||||    
T  38010397 aatttaacattattttatcttttaatatagaaacaacttacgtaagcttagacgtaagggcatatcatgataagcacttgtgatataagctgcaaataag 38010298  T
Q  495 ttgtttatccaaaca 509  Q
    ||||||||| |||||    
T  38010297 ttgtttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 450
Target Start/End: Original strand, 39073768 - 39073827
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttataca 450  Q
    |||||||||||||||||||||||||||||  | |||||||  ||||||| | ||||||||    
T  39073768 aaaaacaatttaacgttattttatcttttaatgtaaaaatgtcttatgcaaacttataca 39073827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 514
Target Start/End: Complemental strand, 423506 - 423464
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    ||||||| ||||||| || ||||||||||||||||||||||||    
T  423506 ttgtgctttaagttgaaagtaagttgtttatccaaacatgccc 423464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 3611217 - 3611171
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |||||||| ||||||||||| ||||| |||||    
T  3611217 aaaaacaatttaactttattttaccttttgctatagaaataacttat 3611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 5998789 - 5998827
Alignment:
Q  399 tttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  5998789 tttaactttattttatcttttgttataaaaatagcttat 5998827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 10619295 - 10619337
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagct 434  Q
    ||||||||||||| || ||||||||||| ||||||||||||||    
T  10619295 aaaacaatttaactttgttttatctttttctataaaaatagct 10619337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 18962118 - 18962160
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagct 434  Q
    |||||| |||||| ||||||||||||||| |||||||||||||    
T  18962118 aaaacagtttaactttattttatcttttgttataaaaatagct 18962160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 20952403 - 20952361
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||    
T  20952403 caacttattttcataagttctccaatatagctaataaaaacaa 20952361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 22971597 - 22971693
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttg 486  Q
    |||||||  ||||| |||||||||||||| ||||| |||||||||||   |||||||||| ||| ||||||||| ||    |||||||||||||||||    
T  22971597 aaaaacagattaactttattttatctttt-ctatagaaatagcttatataagcttatacacaagcgcttatcataataaatgtttgtgctataagttg 22971693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 26202076 - 26202034
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| || |||||||||||||    
T  26202076 caacttattttcataagttctccaatatatcttataaaaacaa 26202034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 444 - 507
Target Start/End: Complemental strand, 26626824 - 26626759
Alignment:
Q  444 ttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    ||||||||||||  ||||||||||  | | || ||||||||| |||||||||||||||||||||||    
T  26626824 ttatacataagtatttatcatgataagagcttatgctataagctgcaaataagttgtttatccaaa 26626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 27317008 - 27316943
Alignment:
Q  441 agcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||||| |||| | |   |||||||| |||||| |||||||||||||| ||||||||||    
T  27317008 agcttatacataagtggttattaag---cgtttgtgttataagctgcaaataagttgtctatccaaaca 27316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 32592634 - 32592592
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| | ||||||||||||||    
T  32592634 caacttattttcataagttctccaatattgcttataaaaacaa 32592592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 40279455 - 40279413
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| |||||||| |||||||    
T  40279455 caacttattttcataagttctccaatatagcttatgaaaacaa 40279413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 41812236 - 41812278
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||  ||||||||||||||||||||||||| ||||    
T  41812236 ttgtgctataaactgcaaataagttgtttatccaaacaggccc 41812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 42457939 - 42457893
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  42457939 aaaaacaatttaactttattttatcttttactatagaaatagattat 42457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 43279551 - 43279593
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||| | |||||||||| ||||||||||||||||    
T  43279551 caacttattttcacaagttctccaatatagcttataaaaacaa 43279593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 3102687 - 3102638
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| | ||| || ||||||||| ||||||||||||||||||||||    
T  3102687 tataaaaatagtttgactttattttatattttgctataaaaatagcttat 3102638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 5133766 - 5133717
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| |||| | ||||||||||||||| |||| |||||||||||    
T  5133766 tataaaaacagtttatctttattttatcttttgttatagaaatagcttat 5133717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 7825242 - 7825197
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||||    
T  7825242 aaaaaaatttaactttactttatcttttgttataaaaatagcttat 7825197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 10490618 - 10490545
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatga 466  Q
    ||||||||||||||||||||| | |||||||| ||||| ||||||   | |||  ||||||| |||||||||||    
T  10490618 aaacaatttaacgttattttaccatttgctatcaaaattgcttatcaaaacttccacataagcgcttatcatga 10490545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 35459900 - 35459855
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || ||||||||||||||| |||| |||||||||||    
T  35459900 aaaacaatttgactttattttatcttttggtatacaaatagcttat 35459855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 40279119 - 40279082
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| | |||||||||||||||||||||||    
T  40279119 ttgtgctataagctacaaataagttgtttatccaaaca 40279082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 1e-28; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 391 - 493
Target Start/End: Complemental strand, 18076187 - 18076083
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||||  ||| |||||||||||| ||||    
T  18076187 aaaaacaatttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgca 18076088  T
Q  489 aataa 493  Q
    |||||    
T  18076087 aataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 388 - 454
Target Start/End: Original strand, 30536634 - 30536700
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  30536634 tataaaaacaatttaacgttatcttatcttttgctataaaaatagcttatgcaagcttatacataag 30536700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 24626286 - 24626166
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| || ||||||| ||| ||||| ||||||||||||  ||||||||||||||   | ||||||||  || ||||||||||||| || |    
T  24626286 aaaaacaatttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagcaatcatcatgataagcatttgtgctataagctgta 24626187  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  24626186 aataagttgtttatccaaaca 24626166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 356 - 467
Target Start/End: Original strand, 29754121 - 29754234
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaac--aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    ||||||||||| ||| |||||||||| ||| |||||||||   |||  ||||||||||||||||||| ||  |||||||||||||| |||| ||||||||    
T  29754121 caacttatttttataagttctccaatatagtttataaaaaggaaatgaaacgttattttatcttttgttactaaaatagcttatgcaagctaatacataa 29754220  T
Q  454 gtgcttatcatgat 467  Q
    | ||||||||||||    
T  29754221 gcgcttatcatgat 29754234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 411 - 517
Target Start/End: Complemental strand, 6538488 - 6538380
Alignment:
Q  411 ttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaac 508  Q
    ||||||||||||| |||| || ||||||| |||||||||||||| ||||||||| ||  | | |||||||||||| |||||||||| | |||||||||||    
T  6538488 ttatcttttgctaaaaaactaacttatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaac 6538389  T
Q  509 atgcccata 517  Q
    | |||||||    
T  6538388 aggcccata 6538380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 392 - 514
Target Start/End: Complemental strand, 34430706 - 34430582
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    |||| |||||||||| ||| |||| ||||| | ||| ||||||||||  |||||||||||||| || |||||||||  ||  |||||||||||| |||||    
T  34430706 aaaagaatttaacgtcattatatcctttgcaaaaaatatagcttatggaagcttatacataagcgcctatcatgataagcacttgtgctataagctgcaa 34430607  T
Q  490 ataagttgtttatccaaacatgccc 514  Q
    ||||| |||||||| ||||||||||    
T  34430606 ataagatgtttatcgaaacatgccc 34430582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 363 - 466
Target Start/End: Original strand, 35070679 - 35070785
Alignment:
Q  363 ttttcatatgttctccaatctagcttataa--aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttata-cataagtgctt 459  Q
    |||||||| |||||||||  ||||||||||  ||||||||| |  |||||||||||||| ||||||||||||||||||  |||||||| ||| |||||||    
T  35070679 ttttcataagttctccaaaatagcttataataaaacaattttattttattttatctttttctataaaaatagcttatgtaagcttatagcattagtgctt 35070778  T
Q  460 atcatga 466  Q
    |||||||    
T  35070779 atcatga 35070785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 8147693 - 8147618
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||| | |||| ||||||||||||    
T  8147693 aaaaacaattcaactttattttatcttttgctataaaaatagcttatg-tagcttatgcttaagcgcttatcatgat 8147618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 30536469 - 30536393
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||| | ||||||||||||   ||||||||||    
T  30536469 aaaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataagcttttatcatgat 30536393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 6016454 - 6016530
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||| ||| ||||||||||||||| ||| |||||| ||||||| || ||||| ||||| ||||||| ||||    
T  6016454 aaaaacaattgaactttattttatcttttgttatgaaaataacttatgcaagattatatataagcgcttatcgtgat 6016530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 12836251 - 12836323
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatca 463  Q
    ||||| |||||||| ||||||||| ||||||| ||||| | |||||||| ||||||||||||||  |||||||    
T  12836251 aaaaataatttaacattattttatattttgctttaaaagttgcttatgcaagcttatacataagctcttatca 12836323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 410 - 514
Target Start/End: Complemental strand, 30926510 - 30926406
Alignment:
Q  410 tttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    |||||||||| ||||| ||||||||||||  ||||||||| ||| |||||||||||||  ||  |||||||||||| ||| |  |||||||||||| |||    
T  30926510 tttatcttttactatagaaatagcttatgtaagcttatacttaattgcttatcatgataagcccttgtgctataagctgcca--aagttgtttatctaaa 30926413  T
Q  508 catgccc 514  Q
    || ||||    
T  30926412 caggccc 30926406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 396 - 454
Target Start/End: Complemental strand, 31623546 - 31623488
Alignment:
Q  396 caatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    ||||||||||| |||||||||||| |||||||||||||| |||  ||||||| ||||||    
T  31623546 caatttaacgtcattttatctttttctataaaaatagctaatgtaagcttatgcataag 31623488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 4163164 - 4163119
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||    
T  4163164 aaacaatttaactttattttatctatttctataaaaatagcttatg 4163119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 4224785 - 4224740
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||    
T  4224785 aaacaatttaactttattttatctatttctataaaaatagcttatg 4224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 6909951 - 6910028
Alignment:
Q  391 aaaaacaatttaacgttattttat-cttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||| ||||||| | ||||| ||||| ||||||||||||  || |||||||||||  |||||||||||    
T  6909951 aaaaacaatttaactttatttttttcttttcctatagaaatagcttatgtaagtttatacataagcacttatcatgat 6910028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 9093636 - 9093681
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||    
T  9093636 aaaacaatttaactttattttatcttttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 29274309 - 29274354
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||| || |||||||||||||||||||| |||||||||||    
T  29274309 aaaacaatttgactttattttatcttttgctatagaaatagcttat 29274354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 471 - 507
Target Start/End: Original strand, 10645480 - 10645516
Alignment:
Q  471 tttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10645480 tttgtgctataagctgcaaataagttgtttatccaaa 10645516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 33117533 - 33117485
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgc 439  Q
    |||||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  33117533 aaaaacaatttaacttaattttatattttgctataaaagtagcttatgc 33117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 471 - 506
Target Start/End: Complemental strand, 9632820 - 9632785
Alignment:
Q  471 tttgtgctataagttgcaaataagttgtttatccaa 506  Q
    ||||||||||||| ||||||||||||||||||||||    
T  9632820 tttgtgctataagctgcaaataagttgtttatccaa 9632785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 14721274 - 14721239
Alignment:
Q  137 aattatgtaattttcttaaattattattggtgtcaa 172  Q
    |||||||||||||||||||||||||| |||||||||    
T  14721274 aattatgtaattttcttaaattattaatggtgtcaa 14721239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 34404656 - 34404727
Alignment:
Q  263 acttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatga 334  Q
    ||||||||||||||||| || |||| |||||||||| || | || ||||| |||  ||||||||||||||||    
T  34404656 acttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatga 34404727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 35069503 - 35069433
Alignment:
Q  441 agcttatacataagtgcttatcatgatg--cgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||| ||||||  |||||||||||   || |||||||||||| ||||||||||||||||||| |||||    
T  35069503 agcttatgcataagcacttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaaca 35069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 470 - 509
Target Start/End: Complemental strand, 35098959 - 35098920
Alignment:
Q  470 gtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  35098959 gtttctgctataagttgcaaataagttgtttattcaaaca 35098920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 103452 - 103398
Alignment:
Q  383 tagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| ||||||| ||||| | || ||||||||||||||| |||||||||||    
T  103452 tagcttatgaaaacaacttaacttcatattatcttttgctatagaaatagcttat 103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 2205615 - 2205693
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||| |||| | |||||||  |||||||| |||||||||| || || |||||||||||| | || |||||||||||    
T  2205615 cttatttccataagctctccaagatagcttatgaaaacaatttgactttgttttatcttttgttttagaaatagcttat 2205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 6016397 - 6016439
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||    
T  6016397 caacttatttttatatgttctccaatatagtttataaaaacaa 6016439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 461
Target Start/End: Complemental strand, 8201224 - 8201154
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    ||||||||||||| |||| |||||||||  | ||||||||| | ||||| |||||||| |||| |||||||    
T  8201224 aaaaacaatttaatgttaatttatctttgacaataaaaataacatatgcaagcttatatataactgcttat 8201154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 429
Target Start/End: Original strand, 28621189 - 28621227
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaa 429  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  28621189 aaaaacaatttaactttattttatcttttgttataaaaa 28621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 34508995 - 34509049
Alignment:
Q  383 tagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||||||||||  |||||| |||| ||| |||||||| |||||||    
T  34508995 tagcttataaaaacaatttaaatttatttcatctcttgttataaaaaaagcttat 34509049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 264361 - 264316
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||| ||||||| ||||||||||||||||| || |||||||||||    
T  264361 aaaacgatttaactttattttatcttttgctttagaaatagcttat 264316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 322552 - 322519
Alignment:
Q  137 aattatgtaattttcttaaattattattggtgtc 170  Q
    |||||||||||||||||||||||||| |||||||    
T  322552 aattatgtaattttcttaaattattagtggtgtc 322519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 2206584 - 2206535
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||  || ||||||||||||||| |||||||||| |||||    
T  2206584 tataaaaacaattatactttattttatcttttgttataaaaataacttat 2206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 8349740 - 8349789
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||||||| ||||||||||||||| || | |||||| ||||    
T  8349740 tataaaaacaatttaactttattttatcttttgttagagaaatagtttat 8349789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 9559621 - 9559666
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||  |||||||||||||||||||| ||||| |||||    
T  9559621 aaaacaatttaaatttattttatcttttgctatagaaataacttat 9559666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 9582674 - 9582715
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaa 429  Q
    |||||||||||||| || ||||||||||||||| ||||||||    
T  9582674 tataaaaacaatttcactttattttatcttttgttataaaaa 9582715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 10728622 - 10728577
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||||||||||| || ||||| |||||    
T  10728622 aaaacaatttaactttattttatcttttgctttagaaataacttat 10728577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 30536617 - 30536572
Alignment:
Q  289 aagttttgtgagactgttagggaggactcgtgaaaatatcttatga 334  Q
    |||||||||||||||||| |||||||||  |||||||| |||||||    
T  30536617 aagttttgtgagactgtttgggaggacttatgaaaatagcttatga 30536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 31624248 - 31624203
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||  ||||||||||||||| |||| |||||||||||    
T  31624248 aaaacaatttaaacttattttatcttttgttatagaaatagcttat 31624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 5e-28; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 392 - 509
Target Start/End: Original strand, 21568708 - 21568827
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    ||||||| ||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||  || ||||||||| |||||    
T  21568708 aaaacaagttaacatcattctatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaa 21568807  T
Q  490 ataagttgtttatccaaaca 509  Q
    | ||| ||||||||||||||    
T  21568808 acaagctgtttatccaaaca 21568827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 46078138 - 46078013
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatg--atgcgtttgtgctataagttgca 488  Q
    |||||||||||||| || ||||||||||| ||||||||||| ||||||  |||||||||||||| ||||||||||  ||| ||||||||| |||||||||    
T  46078138 aaaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgcttatcatgatatgtgtttgtgctttaagttgca 46078039  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
     ||||| ||||| |||||||| ||||    
T  46078038 tataagctgtttgtccaaacaggccc 46078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 45806556 - 45806632
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  45806556 aaaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttattatgat 45806632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 9210619 - 9210494
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| |||||||| | ||||||| |||| |||||||| |||||||||| |||||||||||||| | ||||||||||    ||||| |||||||| ||||    
T  9210619 aaaaagaatttaacatcattttatttttttctataaaagtagcttatgcaagcttatacataagcgattatcatgataaatgtttgcgctataagctgca 9210520  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||| |||||||||||||| ||||    
T  9210519 aataagctgtttatccaaacaggccc 9210494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 45806408 - 45806462
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttata 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45806408 aacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttata 45806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 404 - 509
Target Start/End: Original strand, 23989576 - 23989683
Alignment:
Q  404 cgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgttta 501  Q
    |||||||||||||||| |||||||||||| |||||| | ||||||||||||  |||||||||||  |||  ||| ||||||| |||||||||||||||      
T  23989576 cgttattttatcttttactataaaaatagtttatgcaaacttatacataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttac 23989675  T
Q  502 tccaaaca 509  Q
    ||||||||    
T  23989676 tccaaaca 23989683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 517
Target Start/End: Complemental strand, 45264086 - 45263956
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaa--tagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttg 486  Q
    |||||||||||||| |||||| ||||||| |||||||||  |||||||||  ||||||| | |||| |||| |||||||  ||| |||||  |||||  |    
T  45264086 aaaaacaatttaactttatttcatctttttctataaaaaaatagcttatgtaagcttatgcgtaagcgcttttcatgataagcgcttgtgtgataagccg 45263987  T
Q  487 caaataagttgtttatccaaacatgcccata 517  Q
    ||||||||||||||||||||||| |||||||    
T  45263986 caaataagttgtttatccaaacaggcccata 45263956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 33128742 - 33128620
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataag 494  Q
    |||||||| ||||||||||| || ||||||||||| | || |  ||||||| ||||||  |||||||||||  | ||||||||| |||| ||||||||||    
T  33128742 aatttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataag 33128643  T
Q  495 ttgtttatccaaacatgcccata 517  Q
     |||||||||||||| |||||||    
T  33128642 ctgtttatccaaacaggcccata 33128620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 453
Target Start/End: Complemental strand, 420351 - 420289
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataa 453  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  420351 aaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataa 420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 33266563 - 33266631
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    |||| ||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  33266563 aaaagcaatttaactttattttatcctttgctatataaatagcttttgtgagcttatacataagtgctt 33266631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 48140193 - 48140137
Alignment:
Q  405 gttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  48140193 gttattttatcttttgttataaaaatagcttatgcaagcttatacataagcgcttat 48140137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 31247607 - 31247665
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatac 449  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  31247607 aaaaccaatttatcgttatttcatcttttgctataaaaatagcttatgcaagcttatac 31247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 411 - 509
Target Start/End: Original strand, 18865149 - 18865249
Alignment:
Q  411 ttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaac 508  Q
    ||||||||||||||   |||| ||||||  | |||||| ||||   |||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  18865149 ttatcttttgctatcttaataacttatgtaaacttataaataaacacttatcatgataagcgtttgtgctataagctgcaaataagttgtttatccaaac 18865248  T
Q  509 a 509  Q
    |    
T  18865249 a 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 38138558 - 38138678
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 488  Q
    |||| |||| |||||||| |||||||| | ||||||||||||||||| | | |||||||||||   ||||||||||   ||  ||||||||||||  |||    
T  38138558 aaaatcaatgtaacgttactttatcttatactataaaaatagcttatccaaccttatacataaactcttatcatgacaagtgattgtgctataagacgca 38138657  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||| ||||||||||||||    
T  38138658 aataagctgtttatccaaaca 38138678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 406 - 465
Target Start/End: Original strand, 4970882 - 4970941
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatg 465  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||    
T  4970882 ttattttatcttttgctatagaaatagcttatgtaagcttatacataaccgcttatcatg 4970941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 7244725 - 7244647
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||| | |||||||| |||||||| |||||| ||| || || |||||||||||| |||| |||||||||||    
T  7244725 cttattttcataagctctccaatatagcttatgaaaacagtttgactttcttttatcttttgatatagaaatagcttat 7244647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 20258503 - 20258438
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaa--atagcttatgcgagcttatacataag 454  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||| ||| | ||||||||    
T  20258503 aaaaacaatttaacattattttatcttttgctataaaaatatagcttatgcaagcatgtacataag 20258438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 31247666 - 31247707
Alignment:
Q  409 ttttatcttttgctataaaaatagcttatgcgagcttataca 450  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  31247666 ttttatcttttgctataaaaatagcttatgcaagcttataca 31247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 45004753 - 45004700
Alignment:
Q  395 acaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttata 448  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||    
T  45004753 acaatttaactttattttatcttttgctataaaaatagtttatgcaagcatata 45004700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 48470035 - 48469921
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaa 490  Q
    |||||||||||||| | ||||||||||||||| || ||||||||||||   ||||||||| ||| ||| ||    | | |||||||||||||| ||||||    
T  48470035 aaaaacaatttaacttaattttatcttttgctgtagaaatagcttatgaaggcttatacaaaagcgctgat----aagtgtttgtgctataagctgcaaa 48469940  T
Q  491 taagttgtttatccaaaca 509  Q
    |||| |||| | |||||||    
T  48469939 taagctgttcacccaaaca 48469921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 3554521 - 3554565
Alignment:
Q  126 taattactttaaattatgtaattttcttaaattattattggtgtc 170  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  3554521 taattacattaaattatgtaattttcttaaattatcattggtgtc 3554565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 30571010 - 30571127
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaa 490  Q
    ||||| |||||||| |||||||| |||| |||||| || |||||||||  |||||||||||| |  |||||||||       | ||||||||| ||||||    
T  30571010 aaaaataatttaactttattttacctttcgctatataagtagcttatgtaagcttatacatatgcacttatcatg------ctatgctataagctgcaaa 30571103  T
Q  491 taagttgtttatccaaacatgccc 514  Q
    |||| |||||||||||||| ||||    
T  30571104 taagctgtttatccaaacacgccc 30571127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 31744300 - 31744236
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagt 455  Q
    ||||||||||||||| ||||||||||||  |||| ||||||| |||||| || ||||||||||||    
T  31744300 aaaaacaatttaacgctattttatctttaactatgaaaataggttatgcaagtttatacataagt 31744236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 447
Target Start/End: Complemental strand, 45338440 - 45338384
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttat 447  Q
    ||||||||||||| |||||||||| ||||||||| |||||| ||||||| |||||||    
T  45338440 aaaaacaatttaaggttattttattttttgctatgaaaataacttatgcaagcttat 45338384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 517
Target Start/End: Complemental strand, 119899 - 119772
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatga----tgcgtttgtgctataagttgca 488  Q
    |||||||||||| |||||||||||||| || || ||||||||||||  || |||| ||| |||| || ||||||    || || ||||||||||| ||||    
T  119899 aaacaatttaactttattttatcttttcctgtagaaatagcttatgtaaggttatgcat-agtgtttgtcatgataagtgtgtgtgtgctataagctgca 119801  T
Q  489 aataagttgtttatccaaacatgcccata 517  Q
     ||||| | |||||||||||| |||||||    
T  119800 gataagctttttatccaaacaggcccata 119772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 472 - 511
Target Start/End: Original strand, 22283868 - 22283907
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  22283868 ttgtgctataagttgcacataagttgtttatccaaacatg 22283907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 445 - 517
Target Start/End: Original strand, 38500051 - 38500125
Alignment:
Q  445 tatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgcccata 517  Q
    |||||||||| ||||||||||||  ||| |||||||||||  |||||||||| |||||||| ||||| |||||||    
T  38500051 tatacataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatctaaacaggcccata 38500125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 411 - 518
Target Start/End: Complemental strand, 40196345 - 40196239
Alignment:
Q  411 ttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaac 508  Q
    ||||||||||||| |||||||  |||||| ||||||||  |||| ||||||||||||  |||  |||||| |||  | ||||||||||||||||||||||    
T  40196345 ttatcttttgcta-aaaaatacattatgcaagcttata--taagcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatccaaac 40196249  T
Q  509 atgcccataa 518  Q
    | ||||||||    
T  40196248 aagcccataa 40196239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 417 - 514
Target Start/End: Complemental strand, 5947122 - 5947027
Alignment:
Q  417 tttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgtttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||| ||||||| ||||   ||||||||||||||||| |||||||||    |||||||||||| | |||||||| | |||||||||||| ||||    
T  5947122 tttgctattaaaatagtttatctaagcttatacataagtgcctatcatgat--aattgtgctataagcttcaaataagctatttatccaaacaggccc 5947027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 19022607 - 19022649
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  19022607 caacttattttcataagttctccaatatagcttataaaaacaa 19022649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 20234474 - 20234409
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaa--tagcttatgcgagcttatacataag 454  Q
    |||||||||||||   |||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  20234474 aaaaacaatttaattatattttatcttttgctataaaaatttagcttatgcatgcttatacataag 20234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 28613613 - 28613659
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  28613613 aaaaacaatttaactttgttttatcttttgttataaaaatagcttat 28613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 43152981 - 43153027
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||    
T  43152981 aaaaacaatttaactttattttatcttttgttatagaaatagcttat 43153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 507
Target Start/End: Complemental strand, 33287830 - 33287718
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgc--gtttgtgctataagttgcaaataag 494  Q
    |||||||| | ||||||||||||| |||| |||||||||| |  || |||| ||| ||   ||||||||||    ||||||||||||||||| ||||||     
T  33287830 aatttaacttcattttatcttttgttatataaatagcttacgtaagattatccatcagcatttatcatgataattgtttgtgctataagttgtaaataaa 33287731  T
Q  495 ttgtttatccaaa 507  Q
    |||||||||||||    
T  33287730 ttgtttatccaaa 33287718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 19302638 - 19302686
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgc 439  Q
    |||||||||||||||||| | |||||| |||| ||||||||||||||||    
T  19302638 aaaaacaatttaacgttactatatcttctgctgtaaaaatagcttatgc 19302686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 20269567 - 20269527
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaata 431  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  20269567 aaaaacaatttaactttgttttatcttttgctataaaaata 20269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 20526431 - 20526367
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    |||||||| |||||||||||||||||||| || |||| || |  || ||||||||||||||||||    
T  20526431 aatttaactttattttatcttttgctatataagtagcataggtaagtttatacataagtgcttat 20526367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 26935630 - 26935674
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagctta 436  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  26935630 aaaacaatttaaccttattttatcatttgttataaaaatagctta 26935674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 441 - 506
Target Start/End: Original strand, 33552940 - 33553007
Alignment:
Q  441 agcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgcaaataagttgtttatccaa 506  Q
    |||||||||||||| |||||||||| |  ||  |||||| ||||| ||||||||||||||||||||||    
T  33552940 agcttatacataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 444 - 509
Target Start/End: Complemental strand, 47795905 - 47795838
Alignment:
Q  444 ttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||| ||||||||||  ||| || ||||||||| |||||||||| |||||||| |||||    
T  47795905 ttatacataagtggttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 4909184 - 4909149
Alignment:
Q  137 aattatgtaattttcttaaattattattggtgtcaa 172  Q
    |||||||||||||||| |||||||||||||||||||    
T  4909184 aattatgtaattttctcaaattattattggtgtcaa 4909149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 11700342 - 11700385
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaata 431  Q
    |||||||||||| |||| |||||||||||||| |||||||||||    
T  11700342 tataaaaacaatgtaactttattttatctttttctataaaaata 11700385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 472 - 511
Target Start/End: Original strand, 22296367 - 22296406
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  22296367 ttgtgctataagctgcaaataagttgtttatctaaacatg 22296406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 507
Target Start/End: Original strand, 34464292 - 34464409
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||| ||||| ||| ||||||||||  |||||||||| ||| ||  ||| |||  ||||||||||||||||||  | |||| ||||||| | ||||    
T  34464292 aaaaacaaattaactttaatttatctttttttataaaaataacttgtgtaagcatatg-ataagtgcttatcatgataagggtttatgctataggctgca 34464390  T
Q  489 aataagttgtttatccaaa 507  Q
    || | ||||||||||||||    
T  34464391 aacatgttgtttatccaaa 34464409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 25599878 - 25599924
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||| ||||||||||||||||||| | ||||||||||||| |||||    
T  25599878 aaaaataatttaacgttattttatcatgtgctataaaaataacttat 25599924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 27863859 - 27863901
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  27863859 ttgtgctataagctacaaataagttgtttatccaaacaggccc 27863901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 34083606 - 34083644
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaata 431  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  34083606 aaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 40009461 - 40009415
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||||    
T  40009461 aaaaacaatttaactttattttgtcttttgttataaaaacagcttat 40009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 8160460 - 8160415
Alignment:
Q  126 taattactttaaattatgtaattttcttaaattattattggtgtca 171  Q
    |||||||  ||||||||||||||||||||||||||||  |||||||    
T  8160460 taattacactaaattatgtaattttcttaaattattagcggtgtca 8160415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 38639980 - 38639911
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctta 460  Q
    |||| |||||||||||||||||||||||| | ||||||||| | |||   | ||||| ||||||||||||    
T  38639980 aaaatcaatttaacgttattttatctttttcgataaaaatatcatatataaacttatgcataagtgctta 38639911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 393 - 454
Target Start/End: Complemental strand, 39279951 - 39279891
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    |||||||||||| | |||||||||||||| ||| ||||||| ||||  ||||||||||||||    
T  39279951 aaacaatttaacttaattttatcttttgcaatagaaatagc-tatgtaagcttatacataag 39279891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 433
Target Start/End: Original strand, 40689066 - 40689107
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagc 433  Q
    |||| |||||||| |||||||||||||||||||| |||||||    
T  40689066 aaaataatttaactttattttatcttttgctatagaaatagc 40689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 42656540 - 42656460
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataaaaaca--atttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||| | |||||||  ||||||||| ||| |  |||| || ||||||||||||||| |||| |||||||||||    
T  42656540 cttattttcataagctctccaagatagcttatacaaaaatgatttgactttattttatcttttgttatagaaatagcttat 42656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 2e-27; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 3234105 - 3234227
Alignment:
Q  394 aacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaat 491  Q
    |||||||||||||| |||||||||||||||| || |||||||||||  ||||||| ||||| ||||||||||||  ||| |||||||||||||||||||     
T  3234105 aacaatttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagcgcttatcatgataagcgcttgtgctataagttgcaaac 3234204  T
Q  492 aagttgtttatccaaacatgccc 514  Q
    |||||  ||||||||||| ||||    
T  3234205 aagttagttatccaaacaagccc 3234227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 14331780 - 14331660
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat--gatgcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||||| | || || ||||||||||||  ||||||||||||||||||||||||  || ||| |||||||||||| | ||    
T  14331780 aaaaacaatttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataagtgcttatcatgagaagcgcttgtgctataagcttca 14331681  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||| |||||||| |||||    
T  14331680 aataagctgtttatctaaaca 14331660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 400 - 514
Target Start/End: Complemental strand, 37473381 - 37473265
Alignment:
Q  400 ttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttg 497  Q
    ||||| || ||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||  |   |||||| ||||| |||||||||||||    
T  37473381 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 37473282  T
Q  498 tttatccaaacatgccc 514  Q
    |||||||||||| ||||    
T  37473281 tttatccaaacaggccc 37473265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 1510389 - 1510508
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||| ||| |||||| |||||||| | |||||||||||| ||| |||||||| |||||||||||||| |||  ||| |||||||||||| | ||    
T  1510389 aaaaacaattgaacattattt-atcttttgttttaaaaatagcttttgcaagcttatatataagtgcttatcaagataagcgcttgtgctataagataca 1510487  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||| ||||||||||||||    
T  1510488 aataagctgtttatccaaaca 1510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 14576732 - 14576857
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||| |||||||||| ||| ||||  ||||||||||   ||||||||| ||||||||||||||||||  | | |||||||||||| || |    
T  14576732 aaaaacaatttaactttattttatcctttactatggaaatagcttacatgagcttataaataagtgcttatcatgataagagcttgtgctataagctgga 14576831  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||||| ||||||||| |||| ||||    
T  14576832 aataagatgtttatcccaacaggccc 14576857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 14385842 - 14385918
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||| ||||| ||||||||||||||||||||| || ||| ||||||||||||||  |||||||||||    
T  14385842 aaaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataagctcttatcatgat 14385918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 33541787 - 33541906
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| |||||||| | ||| |||| || |||||||||||| ||||| | |||||||||||||| ||||||||||||   |  |||||||||||  ||||    
T  33541787 aaaaagaatttaacatcattatatccttagctataaaaatatcttattcaagcttatacataagcgcttatcatgataaacacttgtgctataaactgca 33541886  T
Q  489 aataagttgtttatccaaac 508  Q
    ||||||||||||||||||||    
T  33541887 aataagttgtttatccaaac 33541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 400 - 511
Target Start/End: Complemental strand, 17830136 - 17830023
Alignment:
Q  400 ttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttg 497  Q
    ||||| |||||||||| ||||||||||||||||||||||  | | |||| ||||||||||||||||||  | | ||||| |||||| || | ||| ||||    
T  17830136 ttaactttattttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatgataagtgcttgtgatataagctgaagatatgttg 17830037  T
Q  498 tttatccaaacatg 511  Q
    ||||||||||||||    
T  17830036 tttatccaaacatg 17830023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 392 - 509
Target Start/End: Complemental strand, 5709553 - 5709433
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgct-ataaaaatagcttatgcgagcttatacataagtgcttatcatgatgc--gtttgtgctataagttgca 488  Q
    |||||||||||||  |||||||| ||| ||| |||||||||||| || | ||| |||||||||| |||||| ||||| |  |||||||||||||| | ||    
T  5709553 aaaacaatttaacactattttatatttagcttataaaaatagctaatacaagcatatacataagcgcttataatgatacttgtttgtgctataagcttca 5709454  T
Q  489 aataagttgtttatccaaaca 509  Q
    ||||||||||| |||||||||    
T  5709453 aataagttgttcatccaaaca 5709433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 507
Target Start/End: Complemental strand, 29904748 - 29904633
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaa 490  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||  |||||||| ||||||   ||||||||||  ||| |||  ||||||| |||| |    
T  29904748 aaacattttaaatttattttatcttttgctataaaaatagcttatatgagcttat-cataagcttttatcatgataagcgcttgaactataagctgcata 29904650  T
Q  491 taagttgtttatccaaa 507  Q
    |||||||||||||||||    
T  29904649 taagttgtttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 51688696 - 51688576
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||| | |||||||||||||| ||| | |||||||| |||  |||||||| ||||   |||||||||||  ||  |||| ||||||| ||||    
T  51688696 aaaaacaatttatctttattttatcttttcctacataaatagctcatgtaagcttatatataaacacttatcatgataagcacttgtactataagctgca 51688597  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  51688596 aataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 392 - 509
Target Start/End: Complemental strand, 41505676 - 41505558
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    ||||||||||||| ||| ||||  |||| ||||||||||||||||||  |||  || ||||||  |||||||| ||  |||||||||||||||| |||||    
T  41505676 aaaacaatttaactttaatttacgtttt-ctataaaaatagcttatgtaagccaatgcataagcacttatcatcataagcgtttgtgctataagctgcaa 41505578  T
Q  490 ataagttgtttatccaaaca 509  Q
    ||||| ||||||||||||||    
T  41505577 ataagctgtttatccaaaca 41505558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 37517273 - 37517344
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatc 462  Q
    |||||||||||||| ||||||||| ||||| |||| ||||| |||||||||||||||||||||  |||||||    
T  37517273 aaaaacaatttaactttattttatattttggtatagaaataacttatgcgagcttatacataaacgcttatc 37517344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 406 - 514
Target Start/End: Original strand, 41195288 - 41195398
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatc 503  Q
    |||| ||||| ||| |||||||||||| |||||  | |||||||||||| | |||||| |||  ||| |||||||||||| |||||||||||| ||||||    
T  41195288 ttatgttatcatttactataaaaatagtttatgtaaacttatacataagcgattatcaggataagcgcttgtgctataagctgcaaataagttatttatc 41195387  T
Q  504 caaacatgccc 514  Q
    |||||| ||||    
T  41195388 caaacaggccc 41195398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 44932029 - 44932087
Alignment:
Q  409 ttttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||||    
T  44932029 ttttatcttttgctataaatatagtttatgcaagcttatacctaagtgcttatcatgat 44932087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 391 - 505
Target Start/End: Complemental strand, 42391356 - 42391241
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||||||||||| |||||||| | ||| | ||||||||||| ||| || ||||||||||||||  |||||||||||  || |||||||| ||||  |||    
T  42391356 aaaaacaatttaatgttatttt-tgtttcgttataaaaatagtttaagcaagcttatacataagcacttatcatgataagcttttgtgctgtaagccgca 42391258  T
Q  489 aataagttgtttatcca 505  Q
    ||||| |||||||||||    
T  42391257 aataaattgtttatcca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 3233971 - 3234079
Alignment:
Q  289 aagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagcnnnnnnncaacttattttcatatgttctccaatctagctt 388  Q
    |||||||||||||||||||||||| |||  |||||| | ||||| | ||||||||||||        | ||||||||||||| |||||||||| ||||||    
T  3233971 aagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataag-tttttttctacttattttcataagttctccaatatagctt 3234069  T
Q  389 ataaaaacaa 398  Q
    ||||||||||    
T  3234070 ataaaaacaa 3234079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 426 - 519
Target Start/End: Complemental strand, 38247409 - 38247315
Alignment:
Q  426 aaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgcccataat 519  Q
    |||| |||||||| |||||||||||||||||| |||||||||  | | |||||||||||| ||||||| || |||||||||||||| |||| ||||    
T  38247409 aaaacagcttatgtgagcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacaggcccttaat 38247315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 27976586 - 27976511
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatga 466  Q
    |||||||||||||| || ||  ||| ||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  27976586 aaaaacaatttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataaggacttatcatga 27976511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 30191973 - 30191863
Alignment:
Q  400 ttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttg 497  Q
    ||||| ||||||||| ||||||||||||||||||||| |    |||||||| ||||||||||||| ||  ||  || |||||||||||| ||||||| |     
T  30191973 ttaactttattttattttttgctataaaaatagcttaggtatacttatacacaagtgcttatcataataagcacttctgctataagttgtaaataagcta 30191874  T
Q  498 tttatccaaac 508  Q
    |||||||||||    
T  30191873 tttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 467
Target Start/End: Original strand, 31774120 - 31774192
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    ||||||| |||||||||||| |||||    
T  31774120 aaaaataatttaacgttattttctattttgctataaaaatagcttat----gcttataaataagtgcttattatgat 31774192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 47432087 - 47432040
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  47432087 aaaaacaatttaactttattttatctttttctataaaaatagcttatg 47432040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 47498962 - 47499032
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||| ||| ||||||||||||  ||  |||||||||||| |||||||||||||||||||||||||    
T  47498962 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 47499032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 392 - 450
Target Start/End: Complemental strand, 18556917 - 18556859
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttataca 450  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||| | ||||||||||    
T  18556917 aaaacaatttaacaatattttatcttttgcaataaaaatagcttatacaagcttataca 18556859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 45145217 - 45145171
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||    
T  45145217 aaaaacaatttaatattattttatcttttgctataaaaatagcttat 45145171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 443 - 509
Target Start/End: Original strand, 1829075 - 1829143
Alignment:
Q  443 cttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| ||||||||||||  | |||| ||||||| ||| |||||||||||||||||||||||    
T  1829075 cttatacataagcgcttatcatgataagtgtttatgctataggtttcaaataagttgtttatccaaaca 1829143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 41184729 - 41184770
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatag 432  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  41184729 aaaaacaatttaacattattttatcttttgctataaaaatag 41184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 42174840 - 42174775
Alignment:
Q  399 tttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat 464  Q
    |||||| ||| ||||||||||| |||||||||||| ||||| ||||||||||||||  ||||||||    
T  42174840 tttaacattactttatcttttgatataaaaatagcctatgcaagcttatacataagcccttatcat 42174775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 393 - 509
Target Start/End: Complemental strand, 43990240 - 43990119
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatg-----cgtttgtgctataagttgc 487  Q
    |||||||||||| || |||||||  |||| |||||||||| ||||| ||||||||||||||||| |||| || |||     || |||||||||||  |||    
T  43990240 aaacaatttaactttgttttatcacttgccataaaaatagtttatgtgagcttatacataagtgtttattatcatgacaaacgcttgtgctataaactgc 43990141  T
Q  488 aaataagttgtttatccaaaca 509  Q
    ||||| | | ||||||||||||    
T  43990140 aaatacgctatttatccaaaca 43990119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 422 - 515
Target Start/End: Complemental strand, 5741622 - 5741527
Alignment:
Q  422 tataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgccca 515  Q
    |||||||||||||||||  | |||||||||||| ||||||||||||  | | ||||||||||||   |||||||| | |||||||||||| |||||    
T  5741622 tataaaaatagcttatgtaaacttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacaggccca 5741527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 45661188 - 45661244
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttat 447  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||| || |||||||    
T  45661188 aaaaacaatttaatgttattttatcttttgctataaaaatgacttaagcaagcttat 45661244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 49938723 - 49938655
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgctt 459  Q
    ||||| || ||||| ||| |||||| ||||||||| |||||||||||| ||||||||||||||| ||||    
T  49938723 aaaaaaaagttaactttaatttatcctttgctatagaaatagcttatgtgagcttatacataagcgctt 49938655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 395
Target Start/End: Complemental strand, 2295245 - 2295105
Alignment:
Q  254 tttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagcnnnnn 353  Q
    ||||||| | |||||||||| ||||| || | || |||||||||||||||||| ||||| |||  |||||| | ||||||| | |||||||||||         
T  2295245 tttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagc-tcta 2295147  T
Q  354 nncaacttattttcatatgttctccaatctagcttataaaaa 395  Q
      ||||||||||||| | ||||||  || |||||||||||||    
T  2295146 ttcaacttattttcacaagttctctgatatagcttataaaaa 2295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 5894282 - 5894352
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||| ||||||||||||  ||  |||||||||||| | |||||||| ||||||||||||||    
T  5894282 agcttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaaca 5894352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 22344029 - 22343951
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgcccata 517  Q
    ||||||| ||||||  |||||||||||  ||| ||||||  |||||||||||||||||| ||||||||||| |||||||    
T  22344029 agcttatgcataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacaggcccata 22343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 36514606 - 36514677
Alignment:
Q  263 acttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatga 334  Q
    ||||||||||||||||| || | || ||||||| |||||||||||||||| |||  |||||||| |||||||    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatga 36514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 461
Target Start/End: Complemental strand, 7862069 - 7861999
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    |||||||||||| | | |||||||||||| |||||||||||||||||   ||||||| |||||| ||||||    
T  7862069 aaaaacaatttaccatcattttatctttttctataaaaatagcttatcaaagcttatgcataagagcttat 7861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 393 - 510
Target Start/End: Complemental strand, 7927830 - 7927711
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcg---tttgtgctataagttgcaa 489  Q
    ||||| |||||||||||||||| ||||| ||| |||||||||| ||| |  |||||||||| ||||||||  |||  |   || ||| |||||||||  |    
T  7927830 aaacattttaacgttattttattttttgttat-aaaatagcttttgcaaagttatacataaatgcttatcgggataagagcttcgtgttataagttgtga 7927732  T
Q  490 ataagttgtttatccaaacat 510  Q
    |||||||||||||||||||||    
T  7927731 ataagttgtttatccaaacat 7927711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 38001734 - 38001664
Alignment:
Q  264 cttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatga 334  Q
    |||||||||||||||| || |||| |||||||||||||||||| ||||| |||  |||||| | |||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatga 38001664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 11560625 - 11560674
Alignment:
Q  388 tataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||    
T  11560625 tataaaaacaatttgatttgattttatcttttgctataaaaatagcttat 11560674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 424 - 514
Target Start/End: Original strand, 17727207 - 17727299
Alignment:
Q  424 taaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||||||| | ||||||  |||| ||||||| ||||  ||  |||||||||||| | || |||||||||||||||||||| ||||    
T  17727207 taaaaatagcttatgcaaccttatatctaagcgcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacaggccc 17727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 33204320 - 33204373
Alignment:
Q  259 atcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggag 312  Q
    ||||||||||||||| ||||| || |||| |||||||||||||||||| |||||    
T  33204320 atcgacttatttgagcttatctactgacataagttttgtgagactgtttgggag 33204373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 36872260 - 36872215
Alignment:
Q  391 aaaaacaatttaacg-ttattttatcttttgctataaaaatagctt 435  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  36872260 aaaaacaatttaacaattattttatcttttgctataaaaatagctt 36872215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 51190769 - 51190728
Alignment:
Q  468 gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  51190769 gcgtttgtgctataagctacaaataagttgtttatccaaaca 51190728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 414 - 511
Target Start/End: Complemental strand, 1509720 - 1509621
Alignment:
Q  414 tcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    ||||||||| ||||||||| | |||| |||||||| |||||  |||||||||||  | | ||||||| |||| |  ||||||| ||||||||||||||||    
T  1509720 tcttttgctgtaaaaataggtcatgcaagcttatatataagcacttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaacatg 1509621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 51190852 - 51190808
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagctt 435  Q
    |||||||||||||| ||||||||||||||||| || |||||||||    
T  51190852 aaaaacaatttaactttattttatcttttgctttacaaatagctt 51190808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 1432654 - 1432571
Alignment:
Q  264 cttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataag 347  Q
    |||||||||| ||||||||||||| || ||||||||||||||| || || |||  |||||||| | ||||| | | ||||||||    
T  1432654 cttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataag 1432571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 434
Target Start/End: Original strand, 9572187 - 9572230
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagct 434  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||    
T  9572187 aaaagcaatttaactttattttatcttttgctatagaaatagct 9572230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 13809989 - 13809942
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||||| |||||||||||||||||| | ||||| ||||||    
T  13809989 aaaaacaatttaactttattttatcttttgctaaagaaataacttatg 13809942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 15609114 - 15609036
Alignment:
Q  363 ttttcatatgttctccaatctagcttataaaaacaa--tttaacgt-tattttatcttttgctataaaaatagcttatg 438  Q
    |||||||| |||||||||| ||||||||||| ||||  | || | | | ||||||||||||||||||||||||||||||    
T  15609114 ttttcataagttctccaatatagcttataaagacaacctatagcatatgttttatcttttgctataaaaatagcttatg 15609036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 24915130 - 24915177
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||||    
T  24915130 aaaaacaatttaactttattttatcttctgctatagaaatagtttatg 24915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 27820475 - 27820529
Alignment:
Q  457 cttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||  ||| || ||||||||| |||||||||||||||||||||||||    
T  27820475 cttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaaca 27820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 30286599 - 30286649
Alignment:
Q  391 aaaaacaatttaacgttatt--ttatcttttgctataaaaatagcttatgc 439  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| |||||||    
T  30286599 aaaaacaatttaacgttcttgtttatcttttgctataaaaataacttatgc 30286649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 30581793 - 30581746
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||||||||    
T  30581793 aaaaacaatttaactttatttcatcgttttctataaaaatagcttatg 30581746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 30582027 - 30582074
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||| ||||| |||||||||||||| ||||||||||| ||||||    
T  30582027 aaaaacaagttaactttattttatctttttctataaaaataccttatg 30582074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 472 - 511
Target Start/End: Complemental strand, 38189693 - 38189654
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  38189693 ttgtgctataaactgcaaataagttgtttatccaaacatg 38189654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 472 - 511
Target Start/End: Complemental strand, 46423188 - 46423149
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  46423188 ttgtgttataagctgcaaataagttgtttatccaaacatg 46423149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 49938861 - 49938753
Alignment:
Q  289 aagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagcnnnnnnncaacttattttcatatgttctccaatctagctt 388  Q
    ||||||||||||| |||| ||||| |||  |||||| | ||||||| | |||||| ||||       ||||||||||||||| |||||| ||| ||||||    
T  49938861 aagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagctttttt-caacttattttcataagttctctaatatagctt 49938763  T
Q  389 ataaaaacaa 398  Q
    ||||||||||    
T  49938762 ataaaaacaa 49938753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 395 - 437
Target Start/End: Complemental strand, 289227 - 289185
Alignment:
Q  395 acaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||| || |||||||||||||||||| |||||||||||||    
T  289227 acaatttgactttattttatcttttgctacaaaaatagcttat 289185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 7028283 - 7028237
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| ||||| |||||||||||||||||||| |||||| ||||    
T  7028283 aaaaacaacttaactttattttatcttttgctatagaaatagtttat 7028237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 17603406 - 17603448
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    ||||||||||||| | |||||||||| ||||||||||||||||    
T  17603406 caacttattttcagaagttctccaatatagcttataaaaacaa 17603448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 26678892 - 26678846
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgc 439  Q
    ||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  26678892 aaacaatgtaactttattttatcttttgctgtaaaaatagtttatgc 26678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 34619457 - 34619503
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| ||||||||||||||| |||| |||| ||||||    
T  34619457 aaaaacaatttaaccttattttatcttttgttatagaaatggcttat 34619503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 34795566 - 34795608
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||| |||||||||| |||||||||||||| ||||    
T  34795566 ttgtgctataagatgcaaataagctgtttatccaaacaggccc 34795608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 36070237 - 36070199
Alignment:
Q  395 acaatttaacgttattttatcttttgctataaaaatagc 433  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36070237 acaatttaactttattttatcttttgttataaaaatagc 36070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 37617564 - 37617606
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    |||||||||||| ||||||||| |||||||| |||||||||||    
T  37617564 ttgtgctataagctgcaaataaattgtttatacaaacatgccc 37617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 48748654 - 48748707
Alignment:
Q  383 tagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| ||||||||||||| |||||| |||||||| |||| |||||||||||    
T  48748654 tagcttatgaaaacaatttaactttatttcatcttttg-tatagaaatagcttat 48748707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 50319291 - 50319237
Alignment:
Q  383 tagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| ||||||| || || ||||||||||||||| |||| |||||||||||    
T  50319291 tagcttatgaaaacaacttgactttattttatcttttgttatagaaatagcttat 50319237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 8852850 - 8852805
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||| |||| ||||||||||||||| | ||||||||||||||    
T  8852850 aaaacaatataactttattttatcttttgttgtaaaaatagcttat 8852805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 14737776 - 14737829
Alignment:
Q  383 tagcttataaaaacaatttaacgttattttatcttttgctataaaaatagctta 436  Q
    |||||||| |||||||||| || ||||||||||||||| |||| ||||| ||||    
T  14737776 tagcttatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 24334336 - 24334295
Alignment:
Q  262 gacttatttgagtttatccaccgacaaaagttttgtgagact 303  Q
    |||||||||||||||||| || |||| |||||||||||||||    
T  24334336 gacttatttgagtttatcaacggacataagttttgtgagact 24334295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 30043855 - 30043896
Alignment:
Q  396 caatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||| |||||||||||||| ||||| |||||||||||    
T  30043855 caatttaacattattttatcttttcctatagaaatagcttat 30043896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 37631638 - 37631711
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcat 464  Q
    |||||||||||| | | |||||||||||  ||||||| ||||||||||  |||||||  ||||| |||||||||    
T  37631638 aaaaacaatttagcttcattttatctttctctataaagatagcttatgtaagcttatgtataagcgcttatcat 37631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 42174902 - 42174861
Alignment:
Q  357 aacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    |||||||||||||| |||||||||| || |||||||||||||    
T  42174902 aacttattttcataagttctccaatataacttataaaaacaa 42174861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 45855769 - 45855732
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  45855769 ttgtgctataagctgcaaataagttggttatccaaaca 45855732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 433
Target Start/End: Original strand, 45990138 - 45990179
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagc 433  Q
    |||||||||| || ||||||||||||||| ||||||||||||    
T  45990138 aaaacaattttactttattttatcttttgatataaaaatagc 45990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 5e-25; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 12554448 - 12554326
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataag 494  Q
    |||||||| |||||||||| ||| ||||||||||||||||||  ||||||| | ||| | |||||||| ||  ||||||||||| |||| ||||||||||    
T  12554448 aatttaactttattttatcatttactataaaaatagcttatggaagcttatgcgtaaatacttatcataataagcgtttgtgctttaagctgcaaataag 12554349  T
Q  495 ttgtttatccaaacatgcccata 517  Q
    ||||||||||||||||| |||||    
T  12554348 ttgtttatccaaacatgtccata 12554326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 356 - 451
Target Start/End: Original strand, 42500263 - 42500364
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttata------aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatac 449  Q
    ||||||||||||||| |||||||||| |||||||||      ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  42500263 caacttattttcataagttctccaatatagcttatatacacaaaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttatac 42500362  T
Q  450 at 451  Q
    ||    
T  42500363 at 42500364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 3735570 - 3735695
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| || ||||| |||||| ||||||||||||| ||||||||||||  ||||||| |||||| ||||||||||||   |  |||||||||||| ||||    
T  3735570 aaaaaaaaattaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgca 3735669  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    |||| |||||||||||||||| ||||    
T  3735670 aataggttgtttatccaaacaggccc 3735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 32372615 - 32372490
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgca 488  Q
    |||||||||| ||| ||||||||||   |||||||| ||||| |||||  ||  |||||||||| ||||||||||||  ||  |||||||||||| ||||    
T  32372615 aaaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatgataagtgcttgtgctataagctgca 32372516  T
Q  489 aataagttgtttatccaaacatgccc 514  Q
    ||||||||||||||||||||||||||    
T  32372515 aataagttgtttatccaaacatgccc 32372490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 7319091 - 7319209
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaa 489  Q
    |||||||||| || ||||||||| ||||||  || ||||||||||||  ||||||| |||||||||||||||||||  ||| |||||||||||| || ||    
T  7319091 aaaacaatttcactttattttatattttgcgttagaaatagcttatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaa 7319190  T
Q  490 ataagttgtttatccaaac 508  Q
    ||||| ||||||| |||||    
T  7319191 ataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 16458058 - 16458129
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatca 463  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||  |||||||    
T  16458058 aaaaacaatttaa-gttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatca 16458129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 262 - 438
Target Start/End: Complemental strand, 9107231 - 9107056
Alignment:
Q  262 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagcnnnnnnncaactt 361  Q
    |||||||||||||||||| |  |||| ||||||||||||| |||| ||||| |||| |||||| | |||| || | |||||| || |       |  ||     
T  9107231 gacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttttt-ctgcta 9107133  T
Q  362 attttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    ||||||||| |||||||||| || |||| ||||| |||||||| |||||||||||||| || |||||||||||||||    
T  9107132 attttcataagttctccaatataacttacaaaaataatttaactttattttatctttttctttaaaaatagcttatg 9107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 391 - 518
Target Start/End: Complemental strand, 10639944 - 10639816
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    |||||||||||||  | |||||||||||||||||| |||||||||||     |||||||||||||||||||| ||||   |  || |||| |||||||||    
T  10639944 aaaaacaatttaatttaattttatcttttgctatagaaatagcttatatagacttatacataagtgcttatcgtgataaccacttttgct-taagttgca 10639846  T
Q  489 aataagttgtttatccaaacatgcccataa 518  Q
    |||||| |||||||||||||||| ||||||    
T  10639845 aataagctgtttatccaaacatggccataa 10639816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 390 - 509
Target Start/End: Original strand, 26005316 - 26005437
Alignment:
Q  390 taaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgc 487  Q
    ||||||||||| ||| | ||||||||||||   ||| ||||||||||||| ||||||||||||||   ||||||| ||  | |||||||||||||| | |    
T  26005316 taaaaacaattaaacttaattttatcttttaaaatagaaatagcttatgcaagcttatacataagcaattatcataataagtgtttgtgctataagcttc 26005415  T
Q  488 aaataagttgtttatccaaaca 509  Q
     |||||||||||||||||||||    
T  26005416 taataagttgtttatccaaaca 26005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 29925830 - 29925756
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||| | |||| |||||    
T  29925830 aaacaatttaacgctattttatcttttgctataaaaatagcttatgcaagcatatacttaagcgtttattatgat 29925756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 454
Target Start/End: Complemental strand, 15015840 - 15015779
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||    
T  15015840 aaacaatttaacgttatttcaccttttgctacaaaaatagcttatgcaagcttatacataag 15015779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 24030481 - 24030601
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| |||||||| ||||||||||  ||||||||  ||||||||||| |||||||||||   |  |||||||||||  | | |||||||||||| ||||    
T  24030481 aaaaataatttaactttattttatcggttgctatagcaatagcttatgtgagcttatacacgcgcacttatcatgataagtgcttgtgctataagctgca 24030580  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||| ||||||||||||||    
T  24030581 aataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 36227786 - 36227723
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataag 454  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||    
T  36227786 aaaatcaatttaacgctattttatcttttgctataaaaatagattaagcaagcttatacataag 36227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 359 - 514
Target Start/End: Original strand, 7706023 - 7706183
Alignment:
Q  359 cttattttcatatgttctccaatctagcttataaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagc----ttatacataag 454  Q
    |||||||||| | |||||||||| ||||||||  |||||||||||| | |  || |||||| ||||||||||||||||||  |||    |||| ||||||    
T  7706023 cttattttcacaagttctccaatatagcttatttaaacaatttaacttcacattttctttttctataaaaatagcttatgtaagcttatttatgcataag 7706122  T
Q  455 tgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatgccc 514  Q
    | | |||||||||  ||  |||||||||||  |||||||||||||||||| |||||| ||||    
T  7706123 tac-tatcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacaggccc 7706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 391 - 509
Target Start/End: Original strand, 13697838 - 13697958
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgca 488  Q
    ||||| |||||||| ||||||||||||||||||||||||||  |||||| || |||| || ||   |||||||||||    | || || |||||| ||||    
T  13697838 aaaaaaaatttaacattattttatcttttgctataaaaataatttatgcaagtttatgcaaaatcacttatcatgataaatgcttatgttataagctgca 13697937  T
Q  489 aataagttgtttatccaaaca 509  Q
    |||||||||||||||||||||    
T  13697938 aataagttgtttatccaaaca 13697958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 19460508 - 19460572
Alignment:
Q  444 ttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaa 506  Q
    ||||||||||||||||||||||||  || ||||||||||||| |||||||||| |||||||||||    
T  19460508 ttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 396 - 514
Target Start/End: Original strand, 25461840 - 25461959
Alignment:
Q  396 caatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataa 493  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||| |||||||| ||||   |||||||||||  ||| ||||| |||||| | |||||||    
T  25461840 caatttaacgatattt-atcttctgctataaaaatagcttatgcaagcttatatataaccacttatcatgataagcgcttgtgttataagctacaaataa 25461938  T
Q  494 gttgtttatccaaacatgccc 514  Q
      || ||||||||||| ||||    
T  25461939 cctgcttatccaaacaggccc 25461959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 406 - 509
Target Start/End: Complemental strand, 32941446 - 32941342
Alignment:
Q  406 ttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt-ttgtgctataagttgcaaataagttgtttatcc 504  Q
    ||||||||||||||||| ||||| |||| ||||| ||||||||| |||| |||||||||| |  ||  | ||||||||| ||| |||||| |||||||||    
T  32941446 ttattttatcttttgctctaaaactagcctatgcaagcttatacgtaagcgcttatcatggtaagtgctttgctataagctgctaataagctgtttatcc 32941347  T
Q  505 aaaca 509  Q
    |||||    
T  32941346 aaaca 32941342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 391 - 509
Target Start/End: Complemental strand, 40426756 - 40426633
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgc----ttatcatgatgcgt--ttgtgctataagt 484  Q
    |||||||||||| | ||||||||||||||||||||||| || || |||  ||||| || ||||||||    ||||||||||  ||  ||||||||||||     
T  40426756 aaaaacaatttagctttattttatcttttgctataaaa-taactcatgtaagcttgtatataagtgcatgcttatcatgataagtgcttgtgctataagc 40426658  T
Q  485 tgcaaataagttgtttatccaaaca 509  Q
    ||||||| |||||||||||||||||    
T  40426657 tgcaaatgagttgtttatccaaaca 40426633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 14932290 - 14932235
Alignment:
Q  383 tagcttata-aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  14932290 tagcttatacaaaacaatttaactttattttatcttttgctataaaaatagattat 14932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 410 - 514
Target Start/End: Complemental strand, 25461064 - 25460958
Alignment:
Q  410 tttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    |||||||||||||| |||||||||||| || |||||||| |||||  |||||||||||  | | || ||||||||| |  | ||||| ||||||||||||    
T  25461064 tttatcttttgctagaaaaatagcttacgcaagcttatatataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatccaaa 25460965  T
Q  508 catgccc 514  Q
    |||||||    
T  25460964 catgccc 25460958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 35446046 - 35445999
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35446046 aaaaacaatttaactttattttatcatttgctataaaaatagcttatg 35445999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 25461731 - 25461800
Alignment:
Q  396 caatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatga 466  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||   ||||||||||    
T  25461731 caatttaacgatattt-atcttttgctataaaaatagcttatgcaagcttatatataaccacttatcatga 25461800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 398
Target Start/End: Complemental strand, 37954734 - 37954692
Alignment:
Q  356 caacttattttcatatgttctccaatctagcttataaaaacaa 398  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  37954734 caacttattttcatatgttctccaatatagcttataaaaacaa 37954692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 7999188 - 7999127
Alignment:
Q  400 ttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttat 461  Q
    ||||| |||||||| ||||||| ||||||||| ||||||| |||||||||||||| ||||||    
T  7999188 ttaacattattttaccttttgccataaaaataacttatgcaagcttatacataagcgcttat 7999127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 12857792 - 12857904
Alignment:
Q  399 tttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgcaaataagtt 496  Q
    |||||| | |||||||| ||| ||||||||||| || ||   || |||| |||| |||||||| ||||| |||  |||||| ||||||| ||||||||||    
T  12857792 tttaacttcattttatcattttctataaaaataactaatataaggttatgcataggtgcttatgatgatacgtgtttgtgcaataagttacaaataagtt 12857891  T
Q  497 gtttatccaaaca 509  Q
    |||||||||||||    
T  12857892 gtttatccaaaca 12857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 3932764 - 3932811
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatg 438  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||||    
T  3932764 aaaaacaattaaacttcattttatcttttgctataaaaatagcttatg 3932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 4014503 - 4014549
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||    
T  4014503 aaaaacaatctaactttattttatcttttgctatagaaatagcttat 4014549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 9202828 - 9202873
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||    
T  9202828 aaaacaatttaactttattttatcttttgctacagaaatagcttat 9202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 16457933 - 16457994
Alignment:
Q  287 aaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagc 348  Q
    |||||||||||||||||||| ||||| |||  |||||| | ||||||| |||||||||||||    
T  16457933 aaaagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagc 16457994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 32009739 - 32009694
Alignment:
Q  357 aacttattttcatatgttctccaatctagcttataaaaacaattta 402  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||    
T  32009739 aacttgttttcataagttctccaatatagcttataaaaacaattta 32009694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 441 - 507
Target Start/End: Original strand, 34736645 - 34736713
Alignment:
Q  441 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaa 507  Q
    ||||||| |||||||| |||||||| |  | |||||||||||||| |||| ||||||||||||||||||    
T  34736645 agcttatgcataagtgattatcatggtaagtgtttgtgctataagctgcagataagttgtttatccaaa 34736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 427 - 509
Target Start/End: Original strand, 40439070 - 40439153
Alignment:
Q  427 aaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||  ||||||||||| ||||| ||||| |||  ||| ||||| |||||| |||||||||| ||||||||||||||    
T  40439070 aaatagcttatgtaagcttatacatgagtgcctatcaagataagcgcttgtg-tataaggtgcaaataagctgtttatccaaaca 40439153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 10363740 - 10363696
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagctta 436  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||    
T  10363740 aaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 10640092 - 10640008
Alignment:
Q  264 cttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatgagagttttcataagc 348  Q
    |||||||||||||||| || |||| ||||||||||| | |||| ||||| |||  |||||| | ||||||| | |||||||||||    
T  10640092 cttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagc 10640008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 11615497 - 11615453
Alignment:
Q  393 aaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||    
T  11615497 aaacaatttgactttattttatcttttgttataaaaatagcttat 11615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 472 - 511
Target Start/End: Complemental strand, 3520339 - 3520300
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  3520339 ttgtgctataagctgaaaataagttgtttatccaaacatg 3520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 28776926 - 28776856
Alignment:
Q  441 agcttatacataagtgcttatcatgatgcgt--ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||||||||||||  |||||||||||  ||  ||  |||||||| |||||||||||||||||||||||||    
T  28776926 agcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaaca 28776856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 465945 - 465899
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| |||||||||||||||  ||| |||||||||||    
T  465945 aaaaacaatttaactttattttatcttttgtcatagaaatagcttat 465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 430
Target Start/End: Complemental strand, 11835267 - 11835229
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaat 430  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  11835267 aaaacaatttaactttattttatcttttgttataaaaat 11835229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 19293449 - 19293483
Alignment:
Q  137 aattatgtaattttcttaaattattattggtgtca 171  Q
    |||||||| ||||||||||||||||||||||||||    
T  19293449 aattatgttattttcttaaattattattggtgtca 19293483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 37112199 - 37112257
Alignment:
Q  254 tttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggag 312  Q
    |||||||||||||||||||| || ||||| |||| ||  || |||||||||||||||||    
T  37112199 tttgaatcgacttatttgagcttttccactgacataatattcgtgagactgttagggag 37112257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 437
Target Start/End: Original strand, 37112337 - 37112383
Alignment:
Q  391 aaaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    |||||||||||||| || |||||||||||||| || |||||||||||    
T  37112337 aaaaacaatttaactttgttttatcttttgctgtagaaatagcttat 37112383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 40864709 - 40864671
Alignment:
Q  395 acaatttaacgttattttatcttttgctataaaaatagc 433  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  40864709 acaatttaactttattttatcttatgctataaaaatagc 40864671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 41558701 - 41558747
Alignment:
Q  129 ttactttaaattatgtaattttcttaaattattattggtgtcaatgt 175  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||||    
T  41558701 ttactttgaattatgtcattttctcaaattattatttgtgtcaatgt 41558747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 7674638 - 7674593
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||  ||||||||||||||| |||| |||||||||||    
T  7674638 aaaacaatttaaatttattttatcttttggtatagaaatagcttat 7674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Original strand, 9202900 - 9202937
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  9202900 ttgtgctataagctgcaaataagatgtttatccaaaca 9202937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 11064804 - 11064735
Alignment:
Q  265 ttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatatcttatga 334  Q
    ||||||||||||||| ||| ||| ||||||||||||| |||| | ||| |||  |||||||| |||||||    
T  11064804 ttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatga 11064735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 12425561 - 12425516
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  12425561 aaaacaatttaactttattttatcttttactatataaatagtttat 12425516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Original strand, 12433532 - 12433569
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  12433532 ttgtgttataagctgcaaataagttgtttatccaaaca 12433569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 29845052 - 29845097
Alignment:
Q  475 tgctataagttgcaaat-aagttgtttatccaaacatgcccataat 519  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||    
T  29845052 tgctataagttgcaaattaagttgtttatccaaacagggccataat 29845097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 32009616 - 32009579
Alignment:
Q  472 ttgtgctataagttgcaaataagttgtttatccaaaca 509  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  32009616 ttgtgctataagatgcaaataagttgtttatcaaaaca 32009579  T

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Target: scaffold0012 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 207670 - 207736
Alignment:
Q  401 taacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat 467  Q
    |||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||    
T  207670 taacgttattttatcttttgttactaaaatagcttatgcaagcttatacataagtgcttatcatgat 207736  T

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Target: scaffold0018 (Bit Score: 45; Significance: 5e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 397 - 514
Target Start/End: Complemental strand, 158092 - 157973
Alignment:
Q  397 aatttaacgttattttatcttttgctataaaaatagcttatgcgagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataag 494  Q
    |||||||| ||| ||||| |||| ||||||||||||||||||  |||| || ||||||   ||||||| ||  | |||||||||||||| ||||||||||    
T  158092 aatttaactttaatttatgtttttctataaaaatagcttatgtaagctaatgcataagcaattatcatcataagtgtttgtgctataagctgcaaataag 157993  T
Q  495 ttgtttatccaaacatgccc 514  Q
     |||||||||||||| ||||    
T  157992 ctgtttatccaaacaggccc 157973  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 21358 - 21403
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  21358 aaaacaatttaactttattttatcttttcctataaaaatagcttat 21403  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 58927 - 58883
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagctta 436  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||    
T  58927 aaaacaatttaactttattttaacttttcctataaaaatagctta 58883  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 446 - 511
Target Start/End: Complemental strand, 58540 - 58473
Alignment:
Q  446 atacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaacatg 511  Q
    |||||||||||||||| ||||   ||  ||||||| |||| |||||||||||||||||||||||||||    
T  58540 atacataagtgcttattatgacaagcacttgtgctctaagctgcaaataagttgtttatccaaacatg 58473  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 51558 - 51513
Alignment:
Q  392 aaaacaatttaacgttattttatcttttgctataaaaatagcttat 437  Q
    ||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  51558 aaaacaatttaactttattttatattttgttataaaaataacttat 51513  T

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