View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3379_high_10 (Length: 247)
Name: NF3379_high_10
Description: NF3379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3379_high_10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 37027072 - 37027312
Alignment:
| Q |
7 |
aagaatatattcctcacaaaataattgatgaactctattttatacgtactaatagtatccaaattccaaagaaatgcaatgcaccacttaacctttatcc |
106 |
Q |
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| T |
37027072 |
aagaatatattcctcacaaaataattgatgaactctattttatacgtactaatagtatccaaattccaaagaaatgcaatgcaccacttaacctttatcc |
37027171 |
T |
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| Q |
107 |
ttttagcaaattgttagcttataattaacatatcacaaagtgacagcaacaaattaaagcgacagcagaatcagctttagtttatatattcatgctttct |
206 |
Q |
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| T |
37027172 |
ttttagaaaattgttagcttataattaacatatcacaaagtgacagcaacaaattaaagcgacagcagaatcaactttagtttatatattcatgctttct |
37027271 |
T |
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| Q |
207 |
cactttacggctaccaactaactatttatattacagtccat |
247 |
Q |
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| T |
37027272 |
cactttacggctaccaactaactatttatattacagtccat |
37027312 |
T |
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