View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3379_low_12 (Length: 274)

Name: NF3379_low_12
Description: NF3379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3379_low_12
NF3379_low_12
[»] chr2 (57 HSPs)
chr2 (61-261)||(29551259-29551459)
chr2 (1-61)||(29866080-29866140)
chr2 (1-62)||(11711414-11711475)
chr2 (1-65)||(20426995-20427059)
chr2 (1-61)||(39377834-39377894)
chr2 (1-68)||(6761456-6761523)
chr2 (1-60)||(41260024-41260083)
chr2 (1-62)||(30864765-30864826)
chr2 (1-62)||(42263560-42263621)
chr2 (1-61)||(13775709-13775769)
chr2 (1-61)||(40430756-40430816)
chr2 (1-60)||(16241357-16241416)
chr2 (1-60)||(25892034-25892093)
chr2 (1-60)||(44737372-44737431)
chr2 (1-60)||(45065670-45065729)
chr2 (5-55)||(7765888-7765938)
chr2 (1-46)||(3264935-3264980)
chr2 (1-46)||(11363088-11363133)
chr2 (1-62)||(18452566-18452627)
chr2 (1-50)||(39377921-39377970)
chr2 (1-62)||(43658015-43658076)
chr2 (1-65)||(32750432-32750496)
chr2 (1-48)||(32880918-32880965)
chr2 (3-61)||(12486084-12486142)
chr2 (4-61)||(6761558-6761615)
chr2 (4-60)||(1944627-1944683)
chr2 (1-61)||(2100015-2100075)
chr2 (4-60)||(16241266-16241322)
chr2 (1-60)||(4740709-4740768)
chr2 (4-63)||(13775804-13775863)
chr2 (4-63)||(44737279-44737338)
chr2 (4-62)||(7765791-7765849)
chr2 (4-62)||(32750339-32750397)
chr2 (1-63)||(38598452-38598514)
chr2 (1-63)||(41205580-41205642)
chr2 (4-60)||(20427094-20427150)
chr2 (1-57)||(32197378-32197434)
chr2 (4-61)||(1944532-1944589)
chr2 (10-63)||(30864664-30864717)
chr2 (1-61)||(27182073-27182133)
chr2 (1-61)||(27831615-27831675)
chr2 (4-60)||(38598549-38598605)
chr2 (1-37)||(42341640-42341676)
chr2 (5-61)||(44736873-44736929)
chr2 (3-62)||(9152376-9152435)
chr2 (1-60)||(27596739-27596798)
chr2 (4-63)||(29866175-29866234)
chr2 (11-61)||(9152479-9152529)
chr2 (3-61)||(25795330-25795388)
chr2 (12-42)||(42471002-42471032)
chr2 (6-63)||(4063366-4063423)
chr2 (1-62)||(22857801-22857862)
chr2 (4-61)||(25891942-25891999)
chr2 (4-61)||(40430664-40430721)
chr2 (4-61)||(42263468-42263525)
chr2 (4-61)||(43657923-43657980)
chr2 (4-60)||(20360537-20360593)
[»] chr1 (48 HSPs)
chr1 (1-63)||(10380480-10380542)
chr1 (1-62)||(2961194-2961255)
chr1 (1-63)||(34718887-34718949)
chr1 (1-61)||(46320239-46320299)
chr1 (1-64)||(1674062-1674125)
chr1 (1-64)||(2352304-2352367)
chr1 (1-60)||(24595008-24595067)
chr1 (1-60)||(29312438-29312497)
chr1 (1-63)||(9548668-9548730)
chr1 (1-63)||(14281586-14281648)
chr1 (1-62)||(9302009-9302070)
chr1 (1-62)||(38830480-38830541)
chr1 (1-65)||(26550377-26550441)
chr1 (1-68)||(23398071-23398138)
chr1 (1-60)||(28989271-28989330)
chr1 (1-67)||(45536253-45536319)
chr1 (1-50)||(28359161-28359210)
chr1 (1-66)||(33325326-33325391)
chr1 (1-70)||(40161263-40161331)
chr1 (4-60)||(9301918-9301974)
chr1 (1-68)||(7796180-7796247)
chr1 (1-64)||(23537411-23537474)
chr1 (4-63)||(26733781-26733840)
chr1 (4-61)||(2352402-2352459)
chr1 (1-61)||(10065345-10065405)
chr1 (4-60)||(23398173-23398229)
chr1 (11-61)||(9548772-9548822)
chr1 (4-61)||(2961102-2961159)
chr1 (4-61)||(10065253-10065310)
chr1 (13-57)||(2512413-2512457)
chr1 (4-60)||(10380389-10380445)
chr1 (4-60)||(38830576-38830632)
chr1 (1-44)||(6784674-6784717)
chr1 (4-50)||(14281683-14281729)
chr1 (4-61)||(1673970-1674027)
chr1 (4-60)||(7796089-7796145)
chr1 (1-45)||(15289787-15289831)
chr1 (1-61)||(30264864-30264924)
chr1 (4-60)||(45536162-45536218)
chr1 (6-60)||(43929345-43929399)
chr1 (1-46)||(26545010-26545055)
chr1 (4-61)||(26550285-26550342)
chr1 (5-66)||(26924307-26924368)
chr1 (3-60)||(29892222-29892279)
chr1 (4-76)||(15289866-15289938)
chr1 (1-45)||(24463304-24463347)
chr1 (4-60)||(26545090-26545146)
chr1 (4-60)||(28989365-28989421)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-64)||(35949-36012)
scaffold0024 (4-60)||(36047-36103)
[»] chr7 (39 HSPs)
chr7 (1-66)||(12763222-12763287)
chr7 (1-60)||(35427749-35427808)
chr7 (1-61)||(5909561-5909621)
chr7 (1-60)||(23248758-23248817)
chr7 (1-60)||(5347813-5347871)
chr7 (1-60)||(20397814-20397873)
chr7 (1-64)||(46680919-46680982)
chr7 (1-63)||(3411328-3411390)
chr7 (1-67)||(7107622-7107688)
chr7 (1-50)||(30866254-30866303)
chr7 (1-61)||(12426620-12426680)
chr7 (1-45)||(34281759-34281803)
chr7 (1-60)||(7463448-7463507)
chr7 (1-67)||(19979584-19979650)
chr7 (1-62)||(10599406-10599467)
chr7 (4-64)||(12763322-12763382)
chr7 (1-45)||(32050170-32050214)
chr7 (1-62)||(7107720-7107781)
chr7 (1-62)||(17351561-17351622)
chr7 (4-61)||(20397908-20397965)
chr7 (1-49)||(12085114-12085162)
chr7 (1-60)||(46449868-46449927)
chr7 (4-69)||(7463542-7463608)
chr7 (4-62)||(12085021-12085079)
chr7 (1-35)||(29770346-29770380)
chr7 (4-61)||(5347721-5347778)
chr7 (4-61)||(5909469-5909526)
chr7 (4-61)||(23248666-23248723)
chr7 (1-49)||(26564011-26564059)
chr7 (6-58)||(28020002-28020054)
chr7 (4-60)||(34281668-34281724)
chr7 (4-63)||(3411425-3411484)
chr7 (1-60)||(15074621-15074675)
chr7 (13-63)||(6173935-6173985)
chr7 (4-62)||(30866338-30866396)
chr7 (6-63)||(4826856-4826913)
chr7 (4-65)||(32050074-32050135)
chr7 (3-60)||(41088851-41088908)
chr7 (5-65)||(26563915-26563975)
[»] chr6 (33 HSPs)
chr6 (1-66)||(7405437-7405502)
chr6 (1-61)||(24949721-24949781)
chr6 (1-60)||(390895-390954)
chr6 (1-62)||(6045771-6045832)
chr6 (1-66)||(33859483-33859548)
chr6 (1-60)||(17225333-17225392)
chr6 (1-63)||(6047886-6047948)
chr6 (1-62)||(22880915-22880976)
chr6 (1-62)||(22898850-22898911)
chr6 (1-49)||(30686554-30686602)
chr6 (1-60)||(766517-766576)
chr6 (1-64)||(885692-885755)
chr6 (1-60)||(31971120-31971179)
chr6 (1-50)||(14931267-14931316)
chr6 (3-66)||(6801643-6801706)
chr6 (4-63)||(24949627-24949686)
chr6 (4-61)||(885600-885657)
chr6 (4-61)||(14931346-14931403)
chr6 (4-64)||(7405537-7405597)
chr6 (4-66)||(8558907-8558969)
chr6 (1-50)||(34639130-34639179)
chr6 (4-68)||(31971021-31971085)
chr6 (1-60)||(8559004-8559062)
chr6 (1-60)||(13144299-13144358)
chr6 (12-62)||(33859591-33859641)
chr6 (4-61)||(6047794-6047851)
chr6 (3-62)||(1158242-1158301)
chr6 (6-60)||(2943337-2943391)
chr6 (3-60)||(27909067-27909124)
chr6 (4-61)||(30686637-30686694)
chr6 (12-49)||(34639050-34639087)
chr6 (3-63)||(1158337-1158397)
chr6 (4-60)||(17225242-17225298)
[»] chr4 (54 HSPs)
chr4 (1-62)||(2279521-2279582)
chr4 (1-62)||(2385285-2385346)
chr4 (1-61)||(23125644-23125704)
chr4 (1-62)||(4758867-4758928)
chr4 (1-62)||(38688001-38688062)
chr4 (1-61)||(36099485-36099545)
chr4 (1-60)||(3085962-3086021)
chr4 (1-60)||(27006504-27006563)
chr4 (1-64)||(51833007-51833070)
chr4 (1-63)||(580501-580563)
chr4 (1-62)||(5970369-5970430)
chr4 (1-50)||(18430345-18430394)
chr4 (1-62)||(56216231-56216292)
chr4 (1-53)||(7350296-7350348)
chr4 (1-61)||(31227269-31227329)
chr4 (1-61)||(53621418-53621478)
chr4 (1-60)||(18135403-18135462)
chr4 (1-68)||(19485563-19485630)
chr4 (1-60)||(39834273-39834332)
chr4 (1-60)||(39877402-39877461)
chr4 (1-60)||(44200062-44200121)
chr4 (1-60)||(49122610-49122669)
chr4 (1-63)||(31854469-31854531)
chr4 (1-46)||(6246621-6246666)
chr4 (1-62)||(55292202-55292263)
chr4 (1-49)||(2411930-2411978)
chr4 (1-49)||(47948949-47948997)
chr4 (4-63)||(4758773-4758832)
chr4 (1-68)||(53303727-53303794)
chr4 (4-61)||(53621326-53621383)
chr4 (1-57)||(54611976-54612032)
chr4 (4-63)||(20688509-20688568)
chr4 (1-68)||(21221109-21221175)
chr4 (1-63)||(35328935-35328997)
chr4 (4-62)||(36099580-36099638)
chr4 (4-61)||(2385193-2385250)
chr4 (1-62)||(4698620-4698681)
chr4 (4-61)||(6246701-6246758)
chr4 (4-61)||(19485665-19485722)
chr4 (4-61)||(31227364-31227421)
chr4 (1-50)||(52536041-52536090)
chr4 (4-63)||(15170879-15170938)
chr4 (4-62)||(580408-580466)
chr4 (4-62)||(55292109-55292167)
chr4 (2-63)||(7350183-7350244)
chr4 (1-45)||(15170973-15171017)
chr4 (4-60)||(38687910-38687966)
chr4 (1-68)||(21229216-21229283)
chr4 (20-63)||(55190663-55190706)
chr4 (33-63)||(18430249-18430279)
chr4 (3-61)||(53225736-53225794)
chr4 (4-49)||(29834554-29834598)
chr4 (6-63)||(40780246-40780303)
chr4 (4-60)||(49122520-49122575)
[»] chr8 (48 HSPs)
chr8 (1-61)||(2339288-2339348)
chr8 (1-60)||(29563657-29563716)
chr8 (1-60)||(45145868-45145927)
chr8 (1-63)||(12270146-12270208)
chr8 (1-65)||(33837574-33837638)
chr8 (1-60)||(33642457-33642516)
chr8 (1-59)||(32159124-32159182)
chr8 (1-62)||(22781879-22781940)
chr8 (1-61)||(41915592-41915652)
chr8 (1-60)||(2229160-2229219)
chr8 (1-48)||(25847978-25848025)
chr8 (1-60)||(34028382-34028441)
chr8 (1-64)||(37564721-37564784)
chr8 (1-50)||(42351288-42351337)
chr8 (1-60)||(29916526-29916586)
chr8 (1-61)||(30924011-30924071)
chr8 (1-48)||(7668202-7668249)
chr8 (1-60)||(11293277-11293336)
chr8 (1-64)||(27793192-27793255)
chr8 (4-66)||(43135137-43135199)
chr8 (4-61)||(41915687-41915744)
chr8 (4-60)||(45145958-45146014)
chr8 (1-63)||(34157656-34157719)
chr8 (1-48)||(41569186-41569233)
chr8 (4-62)||(2229067-2229125)
chr8 (4-62)||(40465235-40465293)
chr8 (4-61)||(2339383-2339440)
chr8 (4-61)||(32159032-32159089)
chr8 (1-46)||(40465328-40465373)
chr8 (1-60)||(3799806-3799866)
chr8 (4-60)||(25848060-25848116)
chr8 (4-60)||(30923920-30923976)
chr8 (4-63)||(34028476-34028535)
chr8 (1-55)||(40834139-40834194)
chr8 (1-44)||(42189818-42189861)
chr8 (4-62)||(29563751-29563809)
chr8 (4-62)||(42351195-42351253)
chr8 (1-42)||(8242240-8242281)
chr8 (3-63)||(16929297-16929356)
chr8 (4-60)||(27793290-27793346)
chr8 (1-37)||(43135066-43135102)
chr8 (6-68)||(6899514-6899576)
chr8 (4-50)||(11293196-11293242)
chr8 (6-63)||(12958870-12958927)
chr8 (1-45)||(25878262-25878305)
chr8 (4-64)||(41569091-41569151)
chr8 (1-61)||(43295153-43295212)
chr8 (3-63)||(43932141-43932201)
[»] chr3 (71 HSPs)
chr3 (1-61)||(14768096-14768156)
chr3 (1-61)||(28945654-28945714)
chr3 (1-61)||(51698204-51698264)
chr3 (1-63)||(49122940-49123002)
chr3 (1-65)||(47449910-47449974)
chr3 (1-60)||(9465161-9465220)
chr3 (1-60)||(26999020-26999079)
chr3 (1-60)||(29019734-29019793)
chr3 (1-63)||(8243772-8243834)
chr3 (1-63)||(10049664-10049726)
chr3 (1-55)||(52114114-52114168)
chr3 (1-66)||(18765348-18765413)
chr3 (1-58)||(25113439-25113496)
chr3 (1-62)||(42605917-42605978)
chr3 (1-49)||(21653434-21653482)
chr3 (1-61)||(40214990-40215050)
chr3 (1-60)||(379069-379128)
chr3 (1-60)||(9440218-9440277)
chr3 (1-60)||(19202340-19202399)
chr3 (1-64)||(28565025-28565088)
chr3 (1-55)||(6086991-6087045)
chr3 (4-66)||(26999114-26999176)
chr3 (4-61)||(10049761-10049818)
chr3 (1-50)||(25846601-25846650)
chr3 (1-49)||(40141964-40142012)
chr3 (1-50)||(335465-335514)
chr3 (4-61)||(6086899-6086956)
chr3 (1-61)||(3484330-3484390)
chr3 (1-57)||(8825733-8825789)
chr3 (1-61)||(23825147-23825207)
chr3 (10-61)||(39341370-39341421)
chr3 (1-60)||(42225652-42225711)
chr3 (4-47)||(42841862-42841905)
chr3 (4-63)||(51698110-51698169)
chr3 (1-67)||(379163-379229)
chr3 (1-63)||(13826108-13826170)
chr3 (4-57)||(9440130-9440183)
chr3 (3-64)||(28406462-28406523)
chr3 (4-61)||(28945749-28945806)
chr3 (1-42)||(40464539-40464580)
chr3 (4-64)||(8243677-8243737)
chr3 (1-45)||(9190042-9190086)
chr3 (1-61)||(28406557-28406617)
chr3 (4-59)||(28564935-28564990)
chr3 (5-63)||(19202246-19202304)
chr3 (4-49)||(29019828-29019873)
chr3 (11-60)||(40214899-40214948)
chr3 (11-63)||(1122375-1122427)
chr3 (5-68)||(16660376-16660440)
chr3 (4-60)||(21653343-21653399)
chr3 (4-60)||(26123083-26123139)
chr3 (1-44)||(22003811-22003854)
chr3 (1-60)||(22003886-22003945)
chr3 (1-44)||(22011328-22011371)
chr3 (1-60)||(22011403-22011462)
chr3 (1-64)||(1122264-1122333)
chr3 (4-62)||(9465068-9465126)
chr3 (4-62)||(23825242-23825300)
chr3 (204-254)||(41743504-41743554)
chr3 (4-66)||(42605820-42605882)
chr3 (4-57)||(14768191-14768244)
chr3 (1-42)||(19880869-19880910)
chr3 (4-61)||(47450009-47450066)
chr3 (3-60)||(48593141-48593198)
chr3 (1-62)||(48593232-48593293)
chr3 (11-64)||(53441902-53441955)
chr3 (4-48)||(335386-335430)
chr3 (11-59)||(19649679-19649727)
chr3 (4-60)||(25113348-25113404)
chr3 (4-64)||(25846506-25846566)
chr3 (4-60)||(42225561-42225617)
[»] chr5 (54 HSPs)
chr5 (1-60)||(7053647-7053706)
chr5 (1-64)||(7945832-7945895)
chr5 (1-61)||(15569421-15569481)
chr5 (1-61)||(41989562-41989622)
chr5 (1-60)||(7749917-7749976)
chr5 (1-60)||(9601683-9601742)
chr5 (1-60)||(13144879-13144938)
chr5 (1-60)||(31803048-31803107)
chr5 (1-60)||(36417137-36417196)
chr5 (1-62)||(42311900-42311961)
chr5 (1-61)||(6338405-6338465)
chr5 (1-61)||(25027692-25027752)
chr5 (1-57)||(41046830-41046886)
chr5 (4-63)||(2959332-2959391)
chr5 (4-63)||(2967801-2967860)
chr5 (1-60)||(18353298-18353357)
chr5 (1-63)||(904056-904118)
chr5 (1-50)||(1108292-1108341)
chr5 (1-62)||(36419075-36419136)
chr5 (1-50)||(37699870-37699919)
chr5 (1-61)||(21610391-21610451)
chr5 (1-49)||(26898201-26898249)
chr5 (1-48)||(29374181-29374228)
chr5 (4-62)||(25027787-25027845)
chr5 (4-62)||(29374263-29374321)
chr5 (1-62)||(1643341-1643402)
chr5 (1-50)||(20578745-20578794)
chr5 (4-64)||(1643437-1643497)
chr5 (1-61)||(23411163-23411223)
chr5 (4-60)||(37699779-37699835)
chr5 (4-63)||(13144973-13145032)
chr5 (1-62)||(14338812-14338873)
chr5 (4-57)||(21090378-21090431)
chr5 (4-69)||(31802948-31803013)
chr5 (1-45)||(6910726-6910770)
chr5 (1-61)||(41815183-41815243)
chr5 (11-58)||(2959240-2959287)
chr5 (11-58)||(2967709-2967756)
chr5 (4-63)||(23411258-23411317)
chr5 (4-63)||(36417043-36417102)
chr5 (1-50)||(16089177-16089227)
chr5 (4-62)||(26898284-26898342)
chr5 (4-61)||(903964-904021)
chr5 (4-61)||(9601591-9601648)
chr5 (4-61)||(20578653-20578710)
chr5 (4-48)||(2825953-2825997)
chr5 (4-60)||(41815278-41815334)
chr5 (4-63)||(7053741-7053799)
chr5 (4-50)||(7750011-7750057)
chr5 (4-46)||(21090469-21090511)
chr5 (1-60)||(2825862-2825918)
chr5 (11-63)||(13789728-13789780)
chr5 (1-53)||(35922046-35922098)
chr5 (1-61)||(38393845-38393905)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-63)||(11026-11088)
scaffold0221 (4-60)||(11123-11179)
[»] scaffold0123 (2 HSPs)
scaffold0123 (1-60)||(29243-29302)
scaffold0123 (4-55)||(29337-29388)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-60)||(3730-3789)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-62)||(492395-492456)
scaffold0002 (4-61)||(492303-492360)
[»] scaffold2107 (2 HSPs)
scaffold2107 (1-60)||(442-501)
scaffold2107 (4-66)||(536-598)
[»] scaffold0144 (2 HSPs)
scaffold0144 (1-63)||(38821-38883)
scaffold0144 (4-67)||(38918-38981)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-63)||(77435-77496)
scaffold0007 (1-60)||(77344-77403)
[»] scaffold0246 (2 HSPs)
scaffold0246 (1-49)||(15165-15213)
scaffold0246 (4-50)||(15247-15293)
[»] scaffold0592 (2 HSPs)
scaffold0592 (1-45)||(393-437)
scaffold0592 (4-62)||(472-530)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-61)||(5214-5274)
[»] scaffold0314 (1 HSPs)
scaffold0314 (15-63)||(17844-17892)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 29551459 - 29551259
Alignment:
Q  61 ttaattttgtatgtactatccataatcaacacaatcataaatatgttcaacaatttgacttaattcgaatgcacgccaaatatatctctcattacatccg 160  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29551459 ttaattttgtctgtactatccataatcaacacaatcataaatatgttcaacaatttgacttaattcgaatgcacgccaaatatatctctcattacatctg 29551360  T
Q  161 agtcatcttttcttccactctatatgatcaaattcatgaaatgttgtatctttgttctaagacctctcgcatcttttttcaacatactcatcttttaata 260  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29551359 agtcatcttttcttccactctatatgattaaattcatgaaatgttgtatctctgttctaagacctctcgcatcttttttcagcatactcatcttttaata 29551260  T
Q  261 t 261  Q
    |    
T  29551259 t 29551259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29866140 - 29866080
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29866140 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 29866080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11711414 - 11711475
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  11711414 taaattatttaatgtatcttaaaagtaaattgtctcttgtaaataggaccggagggagtatt 11711475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20427059 - 20426995
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20427059 taaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagtaataat 20426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39377894 - 39377834
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39377894 taaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 39377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6761523 - 6761456
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  6761523 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtattactttt 6761456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41260083 - 41260024
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  41260083 taaattatttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggagggagta 41260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30864765 - 30864826
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  30864765 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagactggagggagtatt 30864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42263560 - 42263621
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  42263560 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagtatt 42263621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13775769 - 13775709
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  13775769 taaattatttaatatatctaaaaagtaaattatctcttgtaaataggaccggagggagtat 13775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40430756 - 40430816
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  40430756 taaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggagagagtat 40430816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16241357 - 16241416
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  16241357 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 16241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25892034 - 25892093
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  25892034 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44737372 - 44737431
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  44737372 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 44737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45065670 - 45065729
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  45065670 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagaactggagggagta 45065729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 7765888 - 7765938
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagg 55  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7765888 ttatttaatgtatctaaaaagtaaattgtctcttataaataggaccagagg 7765938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3264980 - 3264935
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3264980 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 3264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11363088 - 11363133
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11363088 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 11363133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18452627 - 18452566
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  18452627 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggactggaggtagtatt 18452566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39377921 - 39377970
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39377921 taaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggacc 39377970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43658015 - 43658076
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||    
T  43658015 taaattatttaatgtatctaaaaagtaaattatctcttgtaaataggactgaagggagtatt 43658076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32750432 - 32750496
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||    
T  32750432 taaattatgtaatgtatctaaaaagtaactcgtctcttgtaaataggatcggagggagtattaat 32750496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32880965 - 32880918
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32880965 taaattatttaatgtatataaaaagtaaattgtctcttgtaaatagga 32880918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 12486084 - 12486142
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  12486084 aattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagggagtat 12486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 6761558 - 6761615
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  6761558 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 6761615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 1944627 - 1944683
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||    
T  1944627 attatttaatgtatctaaaaagtaacttgtctcttgtaaatatgactggagggagta 1944683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2100075 - 2100015
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||| ||||| ||||    
T  2100075 taaattatttaatgtatctaaaaaataacatgtctcttgtaaataggaccggagggggtat 2100015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 16241322 - 16241266
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||||    
T  16241322 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 16241266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 4740768 - 4740709
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||| |||||||||    
T  4740768 taaattatttaatatatataaaaagttaattgtttcttgtaaataggaccggagggagta 4740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13775804 - 13775863
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||| || | |||||| ||||||||||| ||||||||||||    
T  13775804 attatttaatgtatctaaaaagtcaactttctcttataaataggaccggagggagtatta 13775863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 44737338 - 44737279
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||| ||||||||||||    
T  44737338 attattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtatta 44737279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7765849 - 7765791
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| |||||||||||    
T  7765849 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 7765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 32750397 - 32750339
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| |||||||||||    
T  32750397 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 32750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38598514 - 38598452
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| |||| |||  |||||||    
T  38598514 taaattatttaatatatataaaaagtaaattgtctcttgtaaataagaccggagaaagtatta 38598452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41205580 - 41205642
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||| |||||||||| | |||| |||||| |||||||||||||||| |||||||    
T  41205580 taaattatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtatta 41205642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20427094 - 20427150
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |||| |||||| |||||| ||||||||||||||    
T  20427094 attattcaatgtatctaaaaagtcaattttctcttataaataagaccagagggagta 20427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32197434 - 32197378
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||| | ||||||    
T  32197434 taaattatttaatgtatctaaaaaataaattgtttcatgtaaataggatcggaggga 32197378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 1944589 - 1944532
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | ||| |||||||||||| ||||||||||||    
T  1944589 attattcaatgtatctaaaaagtcaactttcttttgtaaataggatcagagggagtat 1944532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 30864717 - 30864664
Alignment:
Q  10 taatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||    
T  30864717 taatatatctaaaaagtcaattttctcttgtcaataggaccggagggagtatta 30864664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27182133 - 27182073
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| ||||||||| |||| | |||||| ||||||||||| || ||||||||||||    
T  27182133 taaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27182073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27831675 - 27831615
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| ||||||||| |||| | |||||| ||||||||||| || ||||||||||||    
T  27831675 taaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27831615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 38598549 - 38598605
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||||||||||||||||||| | ||| |||||||||||||| |||| ||||    
T  38598549 attattcaatgtatctaaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42341676 - 42341640
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctct 37  Q
    ||||||||||||||||| |||||||||||||||||||    
T  42341676 taaattatttaatgtatttaaaaagtaaattgtctct 42341640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 44736873 - 44736929
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||| ||| ||||||||||||| |||||| ||||||||| ||||||||||| |||||    
T  44736873 ttatctaacgtatctaaaaagtcaattgtttcttgtaaaaaggaccagaggaagtat 44736929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 9152435 - 9152376
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||  || ||||||| || ||| |||||||||||||||| |||||||||||    
T  9152435 aattatttaatgactcaaaaaagtcaaatgtttcttgtaaataggaccggagggagtatt 9152376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27596739 - 27596798
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||| ||| |||| |  ||||||||||| |||||||||    
T  27596739 taaattattcaatgtatctaaaaagtcaatcgtctttcataaataggaccggagggagta 27596798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 29866175 - 29866234
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||| ||||||||| || | | |||||||||||||||| ||||||||||||    
T  29866175 attattcaatgtacctaaaaagtcaactttatcttgtaaataggaccggagggagtatta 29866234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 9152479 - 9152529
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||| ||||||||||| |||||| ||||||||||| |||| ||||||||||    
T  9152479 aatgaatctaaaaagtcaattgtttcttgtaaataagaccggagggagtat 9152529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 25795330 - 25795388
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||| |||| ||||||||||| |||||| ||||||||  |||||| ||||||||||    
T  25795330 aattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagtat 25795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Original strand, 42471002 - 42471032
Alignment:
Q  12 atgtatctaaaaagtaaattgtctcttgtaa 42  Q
    |||||||||||||||||||||||||||||||    
T  42471002 atgtatctaaaaagtaaattgtctcttgtaa 42471032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 4063366 - 4063423
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| |||| ||| |||||||||||||| |||| || |||||||| ||||||||||||    
T  4063366 tattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatta 4063423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22857862 - 22857801
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||| |||||| |||||||  || || | |||||||||||    
T  22857862 taaattattcaatgtatctaaaaagtcaattgtttcttgtatttaagatcggagggagtatt 22857801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25891999 - 25891942
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| ||| |||||||||||| || |||||||| ||||||||| | ||||||||||    
T  25891999 attattcaatttatctaaaaagtcaactgtctcttataaataggatcggagggagtat 25891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 40430721 - 40430664
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| |||| |||||| ||||||||| |  |||||||||    
T  40430721 attattgaatgtatctaaaaagtcaattttctcttataaataggatcgaagggagtat 40430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 42263525 - 42263468
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||| | || | |||||| ||||||||||| ||||||||||    
T  42263525 attattcaatgtatctaaaaaatcaactttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 43657980 - 43657923
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | ||||||||||||| | || ||||||||||    
T  43657980 attattcaatgtatctaaaaagtcaactttctcttgtaaataagtccggagggagtat 43657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20360537 - 20360593
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | |||||| ||||||| ||| |||||||||    
T  20360537 attattcaatgtatctaaaaagtcaactttctcttataaatagaaccggagggagta 20360593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10380480 - 10380542
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10380480 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 10380542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2961194 - 2961255
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2961194 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 2961255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34718949 - 34718887
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  34718949 taaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagtatta 34718887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46320239 - 46320299
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46320239 taaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaacagagggagtat 46320299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1674062 - 1674125
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  1674062 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatccgagggagtattaa 1674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2352367 - 2352304
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  2352367 taaattatttaatatatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtattaa 2352304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24595008 - 24595067
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24595008 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagaggtagta 24595067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29312497 - 29312438
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29312497 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9548730 - 9548668
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||    
T  9548730 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggaagtatta 9548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14281648 - 14281586
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14281648 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 14281586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9302009 - 9302070
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  9302009 taaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggaggtagtatt 9302070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38830541 - 38830480
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  38830541 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 38830480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26550377 - 26550441
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  26550377 taaattatttaatgtttctaaaaagtaaattgtctcttataaatatgaccggagggagtattaat 26550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23398138 - 23398071
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||    
T  23398138 taaattattcaatgtatctaaaaagtaagttgtctcttgtaaataggaccggaggtagtattattttt 23398071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28989330 - 28989271
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  28989330 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgaagggagta 28989271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45536253 - 45536319
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattt 67  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||    
T  45536253 taaattatttgatgtatctaaaaagtaaattatctcttgtaaataggaccggagggagaaataattt 45536319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28359161 - 28359210
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28359161 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 28359210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33325391 - 33325326
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || | |||||||||| ||||    
T  33325391 taaattatttaatgtatctaaaaaataaattgtctcttgtaaatatgatcggagggagtataaatt 33325326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40161263 - 40161331
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattttgt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||| | |||||||    
T  40161263 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata-taccggagggagtactcattttgt 40161331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 9301974 - 9301918
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  9301974 attatttaatgtatctaaaaagttaactgtctcttgtaaataggaccggagggagta 9301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7796180 - 7796247
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| |||| |||| ||||||| ||||    
T  7796180 taaattatttaatgtatctaaaaaataaattgtcacttgtaaatatgaccggaggaagtattactttt 7796247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23537411 - 23537474
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| | ||| |||||||||    
T  23537411 taaattatttaatttatctaaaaaataaattgtctcttgtaaataggatcggagagagtattaa 23537474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 26733840 - 26733781
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||    
T  26733840 attatttaatgtatctaaaaagttaattgtttcttgtaaataggaccggagagagtatta 26733781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 2352402 - 2352459
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  2352402 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 2352459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10065345 - 10065405
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| | |||| |||||    
T  10065345 taaattatttaatgtatctaaaaagtaaattgttttttgtaaataggatcggaggaagtat 10065405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 23398173 - 23398229
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  23398173 attattcaatgtatctaaaaagtcaattgtctattgtaaataggaccggagggagta 23398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 9548772 - 9548822
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  9548772 aatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 9548822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 2961159 - 2961102
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  2961159 attattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2961102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10065310 - 10065253
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||| | |||| |||||||||||||||||| ||||||||||    
T  10065310 attattcaatgtatctaaaaaatcaattttctcttgtaaataggaccggagggagtat 10065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2512457 - 2512413
Alignment:
Q  13 tgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  2512457 tgtatctaaaaagtaaattgtctcttgtaaataggatcggaggga 2512413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 10380445 - 10380389
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| |||| ||||    
T  10380445 attattgaatgtatctaaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 38830576 - 38830632
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||||||| |||||||| || |||||||||||||||||||| |||||||||    
T  38830576 attattcaatgtatttaaaaagtcaactgtctcttgtaaataggaccggagggagta 38830632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6784717 - 6784674
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaat 44  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  6784717 taaattatttaatgtatctaaaaagtaaattgtttcctgtaaat 6784674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 14281683 - 14281729
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||    
T  14281683 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggacc 14281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 1674027 - 1673970
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||| ||||| || | ||||||||||||||||||  |||||||||    
T  1674027 attatttaatgtatctagaaagtcaactttctcttgtaaataggaccgaagggagtat 1673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 7796145 - 7796089
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||   ||| |||||||||||||||||| |||||||||    
T  7796145 attattcaatgtatctaaaaagactattttctcttgtaaataggaccggagggagta 7796089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15289831 - 15289787
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||    
T  15289831 taaattatttaatgtatctaaaaaagaaattgtctcttttaaata 15289787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30264864 - 30264924
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||| ||||||||||||||  ||| | |||||||||||||| |||| |||||    
T  30264864 taaattatttaatatatctaaaaagtaacatgtttattgtaaataggaccggaggaagtat 30264924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 45536218 - 45536162
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |||| |||||||||||||  ||| |||||||||    
T  45536218 attattgaatgtatctaaaaagtcaattttctcttgtaaataaaaccggagggagta 45536162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 43929399 - 43929345
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| |||||||||    
T  43929399 tatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 43929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26545055 - 26545010
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    |||||||||||||| |||||||||||||||||| | || |||||||    
T  26545055 taaattatttaatgaatctaaaaagtaaattgtattttataaatag 26545010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 26550342 - 26550285
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||| | |||| |||||    
T  26550342 attattcaatgtatctaaaaagtcaactttctcttgtaaataggatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 26924307 - 26924368
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    ||||| |||| ||| ||||||| || ||| |||| ||||||||||| |||||||||||||||    
T  26924307 ttattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtattaatt 26924368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 29892222 - 29892279
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||| |||| ||||||||||| |||||| || | ||||||||||| |||||||||    
T  29892222 aattattgaatgaatctaaaaagtcaattgtttcctataaataggaccggagggagta 29892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 15289866 - 15289938
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattttgtatgtac 76  Q
    |||||| |||||||||||||||| || | ||||||||||||| |||| ||  |||||||| |||  |||||||    
T  15289866 attattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggattgagtattattttcctatgtac 15289938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24463347 - 24463304
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||    
T  24463347 taaattatttaatatatctaaaaa-taaattgtcttttgtaaata 24463304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 26545090 - 26545146
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | ||||||||||||| |||| |||| ||||    
T  26545090 attattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 28989365 - 28989421
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||||||||||| |||| || | ||||||||||||| |||| |||||||||    
T  28989365 attattcaatgtatctaataagtcaactttctcttgtaaataagaccggagggagta 28989421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36012 - 35949
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36012 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtattaa 35949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 36047 - 36103
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||| ||||||||||| |||| |||||||||||||||||| |||||||||    
T  36047 attattgaatgcatctaaaaagtcaattttctcttgtaaataggaccggagggagta 36103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12763287 - 12763222
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  12763287 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtattaatt 12763222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35427749 - 35427808
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35427749 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35427808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5909561 - 5909621
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  5909561 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 5909621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23248758 - 23248817
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23248758 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 23248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 5347813 - 5347871
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  5347813 taaattatttaatgtatctaaaa-gtaaattgtctcttgtaaataggaccggagggagta 5347871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20397873 - 20397814
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  20397873 taaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagta 20397814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 46680919 - 46680982
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||    
T  46680919 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataagacctgatggagtattaa 46680982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3411390 - 3411328
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||    
T  3411390 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagaccggaagaagtatta 3411328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7107688 - 7107622
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattt 67  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||| ||| ||||||||||||    
T  7107688 taaattatttaatgtatctaaaaaattaattgtctcttgtaaatatgaccggagtgagtattaattt 7107622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30866303 - 30866254
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30866303 taaattatttaatgtatctaaaaagtaaattgtctcttttaaataggacc 30866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12426620 - 12426680
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||||    
T  12426620 taaattatttaatgtatctaaaaagtaaactgtctcttgtaaataagaccggaggaagtat 12426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34281759 - 34281803
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34281759 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 34281803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7463507 - 7463448
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  7463507 taaattatgtaatgtatttaaaaagtaaattgtttcttgtaaataggaccggagggagta 7463448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19979584 - 19979650
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattt 67  Q
    ||||||||||||||||||||||||||||||||| | |||||||| | ||| ||||||||||| ||||    
T  19979584 taaattatttaatgtatctaaaaagtaaattgtttattgtaaatggaaccggagggagtatttattt 19979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10599406 - 10599467
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  10599406 taaattattgtatgtatctaaaaaataaattgtctcttgtaaataggatcggagggagtatt 10599467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 12763322 - 12763382
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||| |||||||||||||    
T  12763322 attattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtattaa 12763382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32050170 - 32050214
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  32050170 taaattatttaatatatctaaaaagtaaattgtctcttgtaaata 32050214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7107720 - 7107781
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||| || | |||||||||||||||||| |||| ||||||    
T  7107720 taaattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggaggtagtatt 7107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17351561 - 17351622
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||| ||||||||||| | ||||||||||| ||||||||||| || ||||||||    
T  17351561 taaattatttaacgtatctaaaaaattaattgtctcttttaaataggaccggatggagtatt 17351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 20397908 - 20397965
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  20397908 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 20397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12085114 - 12085162
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  12085114 taaattatttaatgtatctaaaaaataaactgtctcttgtaaaaaggac 12085162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46449868 - 46449927
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||| | | |||||||||    
T  46449868 taaattatttaatgtatttaaaaaattaattgtctcttgtaaatagaatcggagggagta 46449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 7463542 - 7463608
Alignment:
Q  4 attatttaatgtatctaaaaa-gtaaattgtctcttgtaaataggaccagagggagtattaattttg 69  Q
    |||||| |||||||||||||| || |||| |||||| ||||||||||||||||||||| || |||||    
T  7463542 attattcaatgtatctaaaaaagtcaattttctcttataaataggaccagagggagtaatatttttg 7463608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12085079 - 12085021
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||| ||| |||| |||||||||||||||||| || ||||||||    
T  12085079 attattcaatgtatctaaacagtcaattttctcttgtaaataggaccggatggagtatt 12085021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29770380 - 29770346
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  29770380 taaattatttaatgtatctaaaaagtaaattgtct 29770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5347778 - 5347721
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||| ||||||||||| ||||||||||    
T  5347778 attattgaatgtatctaaaaagtcaactttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5909526 - 5909469
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| ||||||||||||| || |||| ||||||||||||||||||  |||||||||    
T  5909526 attattgaatgtatctaaaaggtcaattttctcttgtaaataggaccgaagggagtat 5909469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 23248723 - 23248666
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | | |||||||||||||||| ||||||||||    
T  23248723 attattcaatgtatctaaaaagtcaactttatcttgtaaataggaccggagggagtat 23248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26564011 - 26564059
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  26564011 taaattattcaatgtatctgaaaagtcaattgtttcttgtaaataggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 28020054 - 28020002
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggag 58  Q
    |||| |||| ||| |||||||||||||| |||| |||||||||||||||||||    
T  28020054 tattcaatgaatcaaaaaagtaaattgtttcttataaataggaccagagggag 28020002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 34281724 - 34281668
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||||||| |||||||| || | |||||||||||||||||| |||||||||    
T  34281724 attattcaatgtatgtaaaaagtcaactttctcttgtaaataggaccggagggagta 34281668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 3411425 - 3411484
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| || | |||||| ||||||||| | ||||||||||||    
T  3411425 attattcaatgtatctaaaaagtcaaatttctcttataaataggatcggagggagtatta 3411484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15074675 - 15074621
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||     ||||||||||| |||||||||||||||| |||||||||    
T  15074675 taaattatttaatgtat-----aagtaaattgtttcttgtaaataggaccggagggagta 15074621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 6173985 - 6173935
Alignment:
Q  13 tgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||  |||||||||||||||||||| |||| || |||||||||    
T  6173985 tgtatctaaaatataaattgtctcttgtaaatatgaccggatggagtatta 6173935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 30866338 - 30866396
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||| | || | ||||||||||||| |||| |||||||||||    
T  30866338 attattgaatgtatctaaaaaatcaactttctcttgtaaataagaccggagggagtatt 30866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 4826856 - 4826913
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| |||| ||| |||||||||||||| |||| || |||||||| ||||||||||||    
T  4826856 tattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatta 4826913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 32050135 - 32050074
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    |||||| ||| |||||||||| | |||| |||||| ||||||| ||| ||||||||||||||    
T  32050135 attattcaatatatctaaaaaatcaattttctcttataaatagaaccggagggagtattaat 32050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 41088908 - 41088851
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||| |||| ||||||||||| |||||| ||||||||  |||||| |||||||||    
T  41088908 aattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 26563975 - 26563915
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    ||||| ||| |||||||||||| |||||  ||||||||| |||| ||||||||||| ||||    
T  26563975 ttattcaatatatctaaaaagttaattgcttcttgtaaaaaggatcagagggagtagtaat 26563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7405502 - 7405437
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7405502 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtattaatt 7405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24949721 - 24949781
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24949721 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 24949781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 390895 - 390954
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  390895 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6045771 - 6045832
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  6045771 taaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagtatt 6045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33859548 - 33859483
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  33859548 taaattatttaatgtatctaaaaagtaaattgtctattgtaaataggaccgaagggagtattaatt 33859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 17225333 - 17225392
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  17225333 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 17225392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6047886 - 6047948
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  6047886 taaattatttaatgtatctaaaaagtaaattatctcttgtaaatatgaccggagggagtatta 6047948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22880976 - 22880915
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22880976 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 22880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22898911 - 22898850
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22898911 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 22898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30686602 - 30686554
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30686602 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 30686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 766517 - 766576
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  766517 taaattatttaatgtatctaaaaaataaattatctcttgtaaataggaccggagggagta 766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 885692 - 885755
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||    
T  885692 taaattatttaatgtatctaaaaagtaaattctctcttgtaaataggatcggaggtagtattaa 885755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31971120 - 31971179
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  31971120 taaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggaggtagta 31971179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14931316 - 14931267
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14931316 taaattatttaatgtatctaaaaagtaaattgtctcttataaataggacc 14931267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 6801643 - 6801706
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  || | ||||||||||    
T  6801643 aattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggatgaagtattaatt 6801706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24949686 - 24949627
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  24949686 attattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtatta 24949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 885657 - 885600
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  885657 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 885600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 14931346 - 14931403
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  14931346 attattcaatgtatctaaaaagtcaattgtctcttgtaaatatgaccggagggagtat 14931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 7405537 - 7405597
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| |||||||||||||||| |||| ||||||||||||| |||| |||||||||||||    
T  7405537 attattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtattaa 7405597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 8558969 - 8558907
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||  |||||||||| ||||    
T  8558969 attattcaatgtatctaaaaagtcaattttctcttgtaaataggactggagggagtatcaatt 8558907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34639130 - 34639179
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||    
T  34639130 taaatttttcaatgtatctaaaaagtaaattgtctcttataaataggacc 34639179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 31971085 - 31971021
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    |||||| |||||||||||||||| || | ||||||||||||| |||| |||||||||||| ||||    
T  31971085 attattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggagggagtattattttt 31971021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8559004 - 8559062
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| || | |||||||||    
T  8559004 taaattattta-tgtatctaaaaaataaattgtctcttgtaaataagatcggagggagta 8559062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13144299 - 13144358
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||  | |||||||||||||| | | |||||||||    
T  13144299 taaattatttaatgtatctaaaaagtaatctatctcttgtaaatagaatcggagggagta 13144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33859591 - 33859641
Alignment:
Q  12 atgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||| || | |||||||||||||||||| |||||||||||    
T  33859591 atgtatctaaaaagttaactttctcttgtaaataggaccggagggagtatt 33859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6047851 - 6047794
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | ||| |||||||||||||| ||||||||||    
T  6047851 attattcaatgtatctaaaaagttaactttctgttgtaaataggaccggagggagtat 6047794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 1158301 - 1158242
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||| |||| ||||||||||| || ||||| |||||||||| ||||||| |||||||    
T  1158301 aattattcaatgaatctaaaaagttaaatgtcttttgtaaatagaaccagagagagtatt 1158242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 2943337 - 2943391
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| ||| |||||||||||||| |||| || |||||||| |||||||||    
T  2943337 tatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 2943391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 27909067 - 27909124
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||| |||| ||  ||||||| || ||| ||||||||||||||||||||||||||    
T  27909067 aattattcaatgaattaaaaaagtcaaatgtttcttgtaaataggaccagagggagta 27909124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 30686637 - 30686694
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| ||||||| |||||||| |||| |||||||||||||| ||  ||||||||||    
T  30686637 attattcaatgtatttaaaaagtcaattttctcttgtaaatagaacgggagggagtat 30686694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 34639087 - 34639050
Alignment:
Q  12 atgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||| || |||||||||||||||||||    
T  34639087 atgtatctaaaaagtcaactgtctcttgtaaataggac 34639050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 1158337 - 1158397
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||| ||||||| |||||||| |||| | ||||||||||||||| |||  ||||||||    
T  1158337 aattattcaatgtatttaaaaagtcaattatttcttgtaaataggacgagaaagagtatta 1158397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 17225298 - 17225242
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | || |||||||||| |||| |||||||||    
T  17225298 attattcaatgtatctaaaaagtcaactttcacttgtaaataagaccggagggagta 17225242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2279582 - 2279521
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2279582 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaaggagtatt 2279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2385285 - 2385346
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2385285 taaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccagagggagtatt 2385346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23125704 - 23125644
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23125704 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 23125644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4758867 - 4758928
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  4758867 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 4758928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38688001 - 38688062
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  38688001 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtatt 38688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36099545 - 36099485
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  36099545 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 36099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3085962 - 3086021
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3085962 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggagggagta 3086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27006563 - 27006504
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  27006563 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactggagggagta 27006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51833070 - 51833007
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  51833070 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggatggagtattaa 51833007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 580501 - 580563
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  580501 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggaggtagtatta 580563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5970369 - 5970430
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  5970369 taaattatttaatgtgtctaaaaagtaaattgtctcttgtaaataggaccggaaggagtatt 5970430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18430345 - 18430394
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18430345 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 18430394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 56216292 - 56216231
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  56216292 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagaatcagaggaagtatt 56216231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7350296 - 7350348
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccaga 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7350296 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatatgaccaga 7350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31227329 - 31227269
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  31227329 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtat 31227269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53621418 - 53621478
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  53621418 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 53621478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18135403 - 18135462
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18135403 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 18135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19485630 - 19485563
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||| ||||    
T  19485630 taaattatttaatgtatttaaaaagtaaattgtttcttgtaaataggacaggagggagtattattttt 19485563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39834332 - 39834273
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  39834332 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataagaccggagggagta 39834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39877461 - 39877402
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  39877461 taaattatttaatgtatctaaaaagtaaatcgtttcttgtaaataggaccggagggagta 39877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44200062 - 44200121
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  44200062 taaattatttagtgtatctaaaaagtaaattgtctcttgtaaataagaccggagggagta 44200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 49122610 - 49122669
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  49122610 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 49122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31854469 - 31854531
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| ||||    
T  31854469 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaaggagaatta 31854531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6246666 - 6246621
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6246666 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 6246621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 55292202 - 55292263
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||    
T  55292202 taaattatttaatgtatctaaaaaataaattgtttcttgtaaataggatcagagagagtatt 55292263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2411930 - 2411978
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2411930 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 2411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47948997 - 47948949
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47948997 taaattatttaatgtatctaaaaagtaaattgtctcttgtaagtaggac 47948949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 4758832 - 4758773
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  4758832 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatta 4758773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 53303794 - 53303727
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||| || ||||||||| ||||    
T  53303794 taaattatttagtgtatctaaaaaataaattgtcacttgtaaataggaccggatggagtattactttt 53303727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 53621383 - 53621326
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  53621383 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 53621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 54612032 - 54611976
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||    
T  54612032 taaattatttaatgtatctaaaaagtaaattgtgtcttataaatagaaccggaggga 54611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 20688509 - 20688568
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||| |||||||    
T  20688509 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggtagtatta 20688568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21221175 - 21221109
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||  ||| ||||||| |||||    
T  21221175 taaattatttaatgtatctaaaaagtaaattgt-ttttgtaaataggacaggagagagtatttatttt 21221109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35328997 - 35328935
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||||| ||| || |||||    
T  35328997 taaattatttaatgtatctaaaaagtaaattattttttgtaaataggaccggagagaatatta 35328935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 36099580 - 36099638
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||| | || |||||||||||||||||||| |||||||||||    
T  36099580 attattcaatgtatctaaaaaatcaactgtctcttgtaaataggaccggagggagtatt 36099638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 2385250 - 2385193
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  2385250 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2385193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4698681 - 4698620
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||||||||||||| | |||||| ||||||||| |||| |||||||||||||    
T  4698681 taaattattcaatgtatctaaaaattcaattgtttcttgtaaaaaggatcagagggagtatt 4698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 6246701 - 6246758
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  6246701 attattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 6246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 19485665 - 19485722
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||| | |||| |||||||||||||||||| ||||||||||    
T  19485665 attattcaatgtatctaaaaaatcaattttctcttgtaaataggaccggagggagtat 19485722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 31227364 - 31227421
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||  |||||||||    
T  31227364 attatttaatgtatctaaaaagtcaactttctcttgtaaataggaccgaagggagtat 31227421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52536041 - 52536090
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  52536041 taaattatttaatgtatataaaaagttaattgtatcttgtaaataggacc 52536090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 15170938 - 15170879
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| ||||||| |||||||| |||| ||||||||||||| |||| ||||||||||||    
T  15170938 attattcaatgtatttaaaaagtcaattttctcttgtaaataagaccggagggagtatta 15170879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 580466 - 580408
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| || ||||||||||||| |||| |||||||||||||||| | |||||||||||    
T  580466 attattcaacgtatctaaaaagtcaattttctcttgtaaataggatcggagggagtatt 580408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 55292167 - 55292109
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| |||| ||||||    
T  55292167 attattcaatgtatctaaaaagtcaaatttctcttgtaaataggaccggaggaagtatt 55292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 7350244 - 7350183
Alignment:
Q  2 aaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||| ||||||||||||| || || | |||||| |||||||||||||||| |||||||    
T  7350244 aaattattcaatgtatctaaaatgtcaactttctcttataaataggaccagaggaagtatta 7350183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15170973 - 15171017
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||    
T  15170973 taaattattcaatgtatctaaaaagtaaattgttttttgtaaata 15171017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 38687966 - 38687910
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | ||||||||||||| |||| |||||||||    
T  38687966 attattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggagggagta 38687910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21229283 - 21229216
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    ||||||||||||||||| ||||   |||||||| ||||||||||| |||  ||||||||||| |||||    
T  21229283 taaattatttaatgtatttaaatgataaattgtttcttgtaaataagactggagggagtatttatttt 21229216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 55190706 - 55190663
Alignment:
Q  20 aaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||| |||| || |||||||||||||||||||||    
T  55190706 aaaaagtaaattgtttcttatatataggaccagagggagtatta 55190663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 18430279 - 18430249
Alignment:
Q  33 tctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||||    
T  18430279 tctcttgtaaataggaccagagggagtatta 18430249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 53225736 - 53225794
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||| |||| ||||||||||| |||| | |||| ||||||||||| ||||||||||    
T  53225736 aattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtat 53225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29834554 - 29834598
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||    
T  29834554 attatttaatgtatctagaaagtaaatt-tttcttgtaaataggac 29834598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 40780303 - 40780246
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| |||| ||| |||||||||||||| |||| || |||||||| ||||||||||||    
T  40780303 tattgaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatta 40780246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 49122575 - 49122520
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||||| |||||||||| || |||||||||||||||| ||| |||||||||    
T  49122575 attattcaatgt-tctaaaaagtcaactgtctcttgtaaatagaaccggagggagta 49122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2339348 - 2339288
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2339348 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 2339288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29563716 - 29563657
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29563716 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45145927 - 45145868
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45145927 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 45145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12270146 - 12270208
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  12270146 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggaatatta 12270208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33837638 - 33837574
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  33837638 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagaaccggagggagtaataat 33837574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33642516 - 33642457
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  33642516 taaattatttaatgtatctaaaaagtaaattatctcttgtaaataggaccggagggagta 33642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32159124 - 32159182
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagt 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32159124 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagt 32159182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22781940 - 22781879
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  22781940 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggtgtatt 22781879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41915652 - 41915592
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  41915652 taaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2229160 - 2229219
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  2229160 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25848025 - 25847978
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25848025 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 25847978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34028441 - 34028382
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  34028441 taaattatttaatgtatctaaaaagtaaattgttacttgtaaataggaccggagggagta 34028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37564721 - 37564784
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||    
T  37564721 taaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccggaaagagtattaa 37564784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42351288 - 42351337
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42351288 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggacc 42351337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29916586 - 29916526
Alignment:
Q  1 taaattatttaatgtatctaaaaa-gtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  29916586 taaattatttaatgtatctaaaaaagtaaattgtttcttgtaaataggactagagggagta 29916526  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30924011 - 30924071
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| |||| |||||    
T  30924011 taaattatttaatgtatctaaaaagtaaattgtcttttataaataggaccggaggtagtat 30924071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7668249 - 7668202
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  7668249 taaattatttaatgtatctaaaaaataaattgtctcttgtaaatagga 7668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11293277 - 11293336
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  11293277 taaatgatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccggaggaagta 11293336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27793255 - 27793192
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||   |||||||||||    
T  27793255 taaattatttaatgcatctaaaaagtaaattatctcttgtaaataggaccgatgggagtattaa 27793192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43135137 - 43135199
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||| ||||||||||    
T  43135137 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagtattaatt 43135199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 41915687 - 41915744
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  41915687 attattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 41915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 45145958 - 45146014
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  45145958 attattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagta 45146014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34157719 - 34157656
Alignment:
Q  1 taaattatttaatgtatctaaaaa-gtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||   ||||||||||||    
T  34157719 taaattatttaatgtatctaaaaaagtaaattatctcttgtaaataggattggagggagtatta 34157656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41569186 - 41569233
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  41569186 taaattatttaatatatctaaaaagtaaattgtttcttgtaaatagga 41569233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 2229125 - 2229067
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| | |||||||||||||| || |||||||||||||||||||| |||||||||||    
T  2229125 attattcattgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatt 2229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 40465293 - 40465235
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| |||| |||||||||||||||| | |||||||||||    
T  40465293 attattcaatgtatctaaaaagtcaattttctcttgtaaataggatcggagggagtatt 40465235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 2339383 - 2339440
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||    
T  2339383 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2339440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 32159089 - 32159032
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||  |||||||||    
T  32159089 attatttaatgtatctaaaaagtcaaatttctcttgtaaataggaccgaagggagtat 32159032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40465328 - 40465373
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  40465328 taaattatttaatgtatctaaaaagtaaattttctcttataaatag 40465373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3799806 - 3799866
Alignment:
Q  1 taaattatttaatgtatctaaaa-agtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||  ||||||||    
T  3799806 taaattatttaatgtatttaaaaaagtaaattgtctattgtaaataggaccgaagggagta 3799866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 25848060 - 25848116
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||| ||||    
T  25848060 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggtagta 25848116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 30923976 - 30923920
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||| ||||    
T  30923976 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 34028476 - 34028535
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| ||||||||||||| || || | |||||||||||||||||| ||||||||||||    
T  34028476 attattcaatgtatctaaaaggtcaactttctcttgtaaataggaccggagggagtatta 34028535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40834194 - 40834139
Alignment:
Q  1 taaattatttaatgtatctaaaaag-taaattgtctcttgtaaataggaccagagg 55  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  40834194 taaattatttaatgtatctaaaaaaattaattgtctcttgtaaataggaccggagg 40834139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42189861 - 42189818
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaat 44  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  42189861 taaattatttaatatatttaaaaagtaaattgtctcttgtaaat 42189818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29563751 - 29563809
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| |||| ||||||    
T  29563751 attattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggaggaagtatt 29563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 42351253 - 42351195
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||| ||   ||||||||||||| |||| |||||||||||    
T  42351253 attatttaatgtatctaaaaagtcaacattctcttgtaaataagaccggagggagtatt 42351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8242281 - 8242240
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaa 42  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  8242281 taaatcatttaatgtatttaaaaagtaaattgtctcttgtaa 8242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 16929297 - 16929356
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||| ||||| ||| |||||| |||||||||||||| || |||||||||    
T  16929297 aattatttaatgtatcaaaaaattaa-ttgtcttttgtaaataggaccggatggagtatta 16929356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 27793290 - 27793346
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| ||| |||||||||||| || | |||||||||||||||||| |||||||||    
T  27793290 attattgaatatatctaaaaagtcaactttctcttgtaaataggaccggagggagta 27793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43135102 - 43135066
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctct 37  Q
    ||||||||| |||||||||||||||||||||||||||    
T  43135102 taaattattcaatgtatctaaaaagtaaattgtctct 43135066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 6899514 - 6899576
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatttt 68  Q
    |||| |||| ||| |||||||||||||| |||| || |||||||| ||||||||| |||||||    
T  6899514 tattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtaataatttt 6899576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 11293242 - 11293196
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||    
T  11293242 attattcaatgtatctaaaaagtcaactttctcttgtaaataggacc 11293196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 12958870 - 12958927
Alignment:
Q  6 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| |||| ||| |||||||||||||| |||| || |||||||| ||||||||||||    
T  12958870 tattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatta 12958927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25878262 - 25878305
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||    
T  25878262 taaattatataatgtatctaaaa-gtaaattgtttcttgtaaata 25878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 41569151 - 41569091
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| ||| |||||||||| | || | |||||||||||||||||| |||||| ||||||    
T  41569151 attattcaatatatctaaaaaatcaactttctcttgtaaataggaccggagggaatattaa 41569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43295153 - 43295212
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||| |||||||| | |||| | |||||||||||||| ||| ||||||    
T  43295153 taaattatttaatgtatataaaaagttatttgt-ttttgtaaataggaccggagagagtat 43295212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 43932141 - 43932201
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||| |||| ||||||||||| |||||| |||| |||  |||||| ||||||||||||    
T  43932141 aattattcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagtatta 43932201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14768156 - 14768096
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14768156 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 14768096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28945714 - 28945654
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28945714 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 28945654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51698204 - 51698264
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51698204 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagagggagtat 51698264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49123002 - 49122940
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  49123002 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagcatta 49122940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47449974 - 47449910
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaat 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  47449974 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagtactaat 47449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9465161 - 9465220
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9465161 taaattattttatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26999079 - 26999020
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26999079 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29019793 - 29019734
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29019793 taaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggagggagta 29019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8243772 - 8243834
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  8243772 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 8243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10049726 - 10049664
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  10049726 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 10049664  T

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Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52114114 - 52114168
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagg 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52114114 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactagagg 52114168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18765348 - 18765413
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  18765348 taaattatttaatgcatctaaaaagtaaattgtttcttgtaaataggaccggaaggagtattaatt 18765413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25113439 - 25113496
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggag 58  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  25113439 taaattatttaatgtatcgaaaaagtaaattgtctcttgtaaataggaccggagggag 25113496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42605917 - 42605978
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  42605917 taaattattttatgtatctaaaaagtaaattgtctcttgtaagtaggaccggagggagtatt 42605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21653434 - 21653482
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21653434 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 21653482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40214990 - 40215050
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  40214990 taaattatttaatgtatctaaaaagtaacttgtctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 379128 - 379069
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  379128 taaattatttaatgtatctaaaaaattaattgtctcttgtaaataggaccggagggagta 379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9440218 - 9440277
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9440218 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 9440277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19202340 - 19202399
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  19202340 taaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggagggagta 19202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28565025 - 28565088
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  28565025 taaattatttaatgcatctaaaaaataaattgtctcttgtaaataggaccgaagggagtattaa 28565088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6086991 - 6087045
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagg 55  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  6086991 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 6087045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 26999114 - 26999176
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  26999114 attattcaatgtatctaaaaagtcaaatgtctcttgtaaataggaccggagggagtattaatt 26999176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 10049761 - 10049818
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10049761 attattcaatgtatctaaaaagtcaattgtctcttgtaaataggaccggagggagtat 10049818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25846601 - 25846650
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25846601 taaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggacc 25846650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40141964 - 40142012
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40141964 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 40142012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 335465 - 335514
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  335465 taaattatttaatgtatctaaaaagtaaattgttttttgtaaataggacc 335514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6086956 - 6086899
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  6086956 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 6086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3484390 - 3484330
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||    
T  3484390 taaactatttaatgtatctaaaaaattaattgtctcttgtaaataggactggagggagtat 3484330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8825789 - 8825733
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    ||||||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  8825789 taaattatttaatatatctaaaaagtaattcgtctcttgtaaataagaccagaggga 8825733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23825207 - 23825147
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||   ||||||||||    
T  23825207 taaattatttgatgtatctaaaaagtaaattgtttcttgtaaataggattggagggagtat 23825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 39341421 - 39341370
Alignment:
Q  10 taatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  39341421 taatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 39341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42225652 - 42225711
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||| |||||||||||||| | ||||||||| |||| |||||||||    
T  42225652 taaattatttaatgtatcaaaaaagtaaattgttttttgtaaataagaccggagggagta 42225711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 42841862 - 42841905
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaatagg 47  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  42841862 attatttaatgtatttaaaaagtaaattgtctcttgtaaatagg 42841905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 51698169 - 51698110
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||||||    
T  51698169 attattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatta 51698110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 379163 - 379229
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattt 67  Q
    ||||||||| |||||||||||||||| || | |||||| ||||||||||| || |||||||||||||    
T  379163 taaattattcaatgtatctaaaaagtcaactttctcttataaataggaccggaaggagtattaattt 379229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13826170 - 13826108
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||  |||||||||||| || |||||||||||||||| || |||||||||    
T  13826170 taaattatttaatgtaaataaaaagtaaatcgtttcttgtaaataggaccggaaggagtatta 13826108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9440183 - 9440130
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||    
T  9440183 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggga 9440130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 28406523 - 28406462
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||| || | ||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  28406523 aattattcaacgaatctaaaaagtcaattgtttcttgtaaataggaccggagggagtattaa 28406462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 28945749 - 28945806
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||||||    
T  28945749 attattgaatatatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 28945806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40464580 - 40464539
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaa 42  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  40464580 taaattatttaatttatctaaaaagtaaattgtctcttgtaa 40464539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 8243737 - 8243677
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| || | ||||||||    
T  8243737 attattcaatgtatctaaaaagtcaattgtctcttgtaaataagaccggatgaagtattaa 8243677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9190086 - 9190042
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  9190086 taaattatttaatgtatcttaaaagtaaatcgtctcttgtaaata 9190042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28406557 - 28406617
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| |||| | ||||||||| |||||| |||||||||||||||| ||||||||||    
T  28406557 taaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggagtat 28406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 28564990 - 28564935
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagt 59  Q
    |||||| ||||||| |||||||| |||| |||||||||||||||||| ||||||||    
T  28564990 attattcaatgtatataaaaagtcaattttctcttgtaaataggaccggagggagt 28564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 19202304 - 19202246
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||| |||||||||||||||| || | |||||||||||||||||| ||||||| ||||    
T  19202304 ttattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagaatta 19202246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 29019828 - 29019873
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||    
T  29019828 attattcaatgtatctaaaaagtcaattttctcttgtaaataggac 29019873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 40214948 - 40214899
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||| || | |||||||||||||||||| |||||||||    
T  40214948 aatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagta 40214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 1122375 - 1122427
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||| |||| ||||||||||||||||||  || ||||||||    
T  1122375 aatgtatctaaaaagtcaattttctcttgtaaataggaccgaagtgagtatta 1122427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 16660376 - 16660440
Alignment:
Q  5 ttatttaatgtatctaaaaagtaaattgtctcttgt-aaataggaccagagggagtattaatttt 68  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||  || ||||||||| ||||    
T  16660376 ttatttaatgtatctaaaaagtaaatcgtctcttctaaaataggactggatggagtattattttt 16660440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 21653399 - 21653343
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||| | || | |||||||||||||||||| |||||||||    
T  21653399 attattcaatgtatctaaaaaatcaaatttctcttgtaaataggaccggagggagta 21653343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 26123083 - 26123139
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| |  | |||||||||||||||||| |||||||||    
T  26123083 attattcaatgtatctaaaaagtcatctttctcttgtaaataggaccggagggagta 26123139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22003854 - 22003811
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaat 44  Q
    ||||||||| |||||||||||||| | |||||||||||||||||    
T  22003854 taaattattcaatgtatctaaaaaattaattgtctcttgtaaat 22003811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22003886 - 22003945
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||| |||| ||| || ||||||||||| |||| ||||    
T  22003886 taaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22011371 - 22011328
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaat 44  Q
    ||||||||| |||||||||||||| | |||||||||||||||||    
T  22011371 taaattattcaatgtatctaaaaaattaattgtctcttgtaaat 22011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22011403 - 22011462
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| |||||||||||||||| |||| ||| || ||||||||||| |||| ||||    
T  22011403 taaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22011462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1122333 - 1122264
Alignment:
Q  1 taaattatttaatgtatctaaaaag------taaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||||||||||||||||||||||      |||||||| | |||||||||||| | |||||||||||||    
T  1122333 taaattatttaatgtatctaaaaagtaaaagtaaattgtttattgtaaataggatcggagggagtattaa 1122264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 9465126 - 9465068
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | | |||||||||||||||| ||| |||||||    
T  9465126 attattcaatgtatctaaaaagtcaactttatcttgtaaataggaccggagagagtatt 9465068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23825242 - 23825300
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || | ||||||||||||| || | |||||||||||    
T  23825242 attattcaatgtatctaaaaagtcaactttctcttgtaaatatgatcggagggagtatt 23825300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 41743554 - 41743504
Alignment:
Q  204 ttgtatctttgttctaagacctctcgcatcttttttcaacatactcatctt 254  Q
    |||||||||||||||| |||||||| | ||||||| |||||||||| ||||    
T  41743554 ttgtatctttgttctaggacctctcacgtctttttccaacatactcttctt 41743504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42605882 - 42605820
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||| |||||||||||||| | || | | |||||||||||||||  |||||||||||||||    
T  42605882 attattcaatgtatctaaaaaatcaactttatcttgtaaataggactggagggagtattaatt 42605820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 14768191 - 14768244
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    |||||| |||||||||||||| | || | |||||||||||||||||| ||||||    
T  14768191 attattcaatgtatctaaaaaatcaactttctcttgtaaataggaccggaggga 14768244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19880910 - 19880869
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaa 42  Q
    ||||||||||||||||||||||| || |||||| ||||||||    
T  19880910 taaattatttaatgtatctaaaacgtcaattgtttcttgtaa 19880869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 47450009 - 47450066
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||| | || | ||| |||||||||||||| || |||||||    
T  47450009 attatttaatgtatctaaaaactcaactttctattgtaaataggaccggaaggagtat 47450066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 48593198 - 48593141
Alignment:
Q  3 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||| |||||||||||||||| | |||| |||| |  ||||||||||||||||||    
T  48593198 aattattcaatgtatctaaaaagtcacttgtttcttatgtataggaccagagggagta 48593141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48593232 - 48593293
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||| |||| ||||||||| | | |||| ||||||| |||||||| |||||||||||    
T  48593232 taaattattcaatgaatctaaaaaattacttgtttcttgtatataggaccggagggagtatt 48593293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 53441955 - 53441902
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||| ||| |||||||||| ||| |||| ||||||||||| |||||||||||||    
T  53441955 aatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtattaa 53441902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 335430 - 335386
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    |||||| |||||||||||||||| || | ||||||||||||||||    
T  335430 attattcaatgtatctaaaaagtcaactttctcttgtaaatagga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 19649679 - 19649727
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagt 59  Q
    |||| ||||||||| | || ||| |||||||||||||||||||||||||    
T  19649679 aatgaatctaaaaaatcaaatgtttcttgtaaataggaccagagggagt 19649727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 25113404 - 25113348
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | |||||| ||||||||||| |||| ||||    
T  25113404 attattcaatgtatctaaaaagtcaactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 25846566 - 25846506
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| |||||||||||||| | || ||||| || ||||||||||| |||||||| ||||    
T  25846566 attattcaatgtatctaaaaaatcaactgtcttttataaataggaccggagggagtgttaa 25846506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 42225617 - 42225561
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||| | |||| | |||||||||| ||||| |||||||||    
T  42225617 attattcaatgtatctaaaaaattaattttttcttgtaaatgggaccggagggagta 42225561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7053706 - 7053647
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7053706 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 7053647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7945895 - 7945832
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  7945895 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtattaa 7945832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15569421 - 15569481
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  15569421 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 15569481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41989622 - 41989562
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41989622 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 41989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7749976 - 7749917
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  7749976 taaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagta 7749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9601683 - 9601742
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9601683 taaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13144938 - 13144879
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13144938 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 13144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31803048 - 31803107
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  31803048 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 31803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36417137 - 36417196
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  36417137 taaattatttaatgtatctaaaaagtaaattgtttcttataaataggaccagagggagta 36417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42311900 - 42311961
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  42311900 taaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatcagagggattatt 42311961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6338405 - 6338465
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  6338405 taaattatttaatgtatctaaaaagtaaattgtcttttgtaaataggactggagggagtat 6338465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25027752 - 25027692
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  25027752 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 25027692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41046886 - 41046830
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  41046886 taaattatttaatgtatctaaaaagtagattgtctcttgtaaataggaccggaggga 41046830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 2959332 - 2959391
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  2959332 attatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtatta 2959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 2967801 - 2967860
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  2967801 attatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtatta 2967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18353298 - 18353357
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  18353298 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggatcggagggagta 18353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 904056 - 904118
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||    
T  904056 taaattatttaatgtatctaaaaagtaaattgtttattgtaaatagaaccggagggagtatta 904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1108341 - 1108292
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1108341 taaattattttatgtatctaaaaagtaaattgtctcttgtaaataggacc 1108292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36419075 - 36419136
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  36419075 taaattattttatgtatctaaaaagtaaattgtctcttgtaaataggtccgaagggagtatt 36419136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37699870 - 37699919
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37699870 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggacc 37699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21610391 - 21610451
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||||||||    
T  21610391 taaattatttaatgtatataaaaagttaattgtttcttgtaaataggaccggagggagtat 21610451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26898249 - 26898201
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26898249 taaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggac 26898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29374228 - 29374181
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29374228 taaattattcaatgtatctaaaaagtaaattgtctcttgtaaatagga 29374181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 25027787 - 25027845
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  25027787 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatt 25027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29374263 - 29374321
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  29374263 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1643402 - 1643341
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  1643402 taaatttttcaatgtatctaaaaagtaaattgtctattgtaaataggaccggaggtagtatt 1643341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20578745 - 20578794
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  20578745 taaattatttaatgtatataaaaagtaaattgtctattgtaaataggacc 20578794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 1643437 - 1643497
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaa 64  Q
    |||||| |||||||||||||||| || |||||||| ||||||||||| |||||||||||||    
T  1643437 attattgaatgtatctaaaaagtcaactgtctcttataaataggaccggagggagtattaa 1643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23411223 - 23411163
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||||||    
T  23411223 taaattatttaatgtatctaaaaagtaatttgtatcttataaatatgaccggagggagtat 23411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 37699835 - 37699779
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| |||||||||    
T  37699835 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 37699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13144973 - 13145032
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||| | || |||||||||||||||||||| ||||||||||||    
T  13144973 attattcaatgtatctaaaaaatcaactgtctcttgtaaataggaccggagggagtatta 13145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14338873 - 14338812
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||| |||||||||| | |||||||||||||||||| |||| | |||||||||    
T  14338873 taaattatttaatttatctaaaaaattaattgtctcttgtaaataagacccgggggagtatt 14338812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21090431 - 21090378
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagaggga 57  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| ||||||    
T  21090431 attattcaatgtatctaaaaagttaattttctcttgtaaataggaccggaggga 21090378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 31803013 - 31802948
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattttg 69  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||||||| || |||||    
T  31803013 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtactacttttg 31802948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6910770 - 6910726
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  6910770 taaattatttaatgtatctaaaaaataaattgtttcttgtaaata 6910726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41815243 - 41815183
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||| | || |||||||    
T  41815243 taaattatttaatgtatttaaaaagtaaattgtttattgtaaataggatcggaaggagtat 41815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 2959287 - 2959240
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggag 58  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||    
T  2959287 aatgtatctaaaaagtcaattttctcttgtaaataggaccggagggag 2959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 2967756 - 2967709
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggag 58  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||    
T  2967756 aatgtatctaaaaagtcaattttctcttgtaaataggaccggagggag 2967709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23411258 - 23411317
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| |||||||||||||| | |||| ||||||||||||| |||| ||||||||||||    
T  23411258 attattcaatgtatctaaaaaatcaattttctcttgtaaataagaccggagggagtatta 23411317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 36417102 - 36417043
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| ||||||| |||||||| || | |||||||||||||||||| ||||||||||||    
T  36417102 attattcaatgtatttaaaaagtcaaatttctcttgtaaataggaccggagggagtatta 36417043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16089177 - 16089227
Alignment:
Q  1 taaattatttaatgtatctaaaaag-taaattgtctcttgtaaataggacc 50  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||||    
T  16089177 taaattatttaatatatctaaaaaaataaattgtctcttgtaaataggacc 16089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 26898284 - 26898342
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||| ||||||||||| || | |||||||||||||||||| |||||||||||    
T  26898284 attattcaatgcatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 26898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 904021 - 903964
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| ||| |||||||||||| || | |||||||||||||||||| ||||||||||    
T  904021 attattcaatatatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 903964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 9601648 - 9601591
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| || |||||||    
T  9601648 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggaaggagtat 9601591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 20578710 - 20578653
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||||| || | |||||| ||||||| ||||||||||||||    
T  20578710 attattcaatgtatctaaaaagtcaactttctcttataaatagaaccagagggagtat 20578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 2825953 - 2825997
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 48  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||    
T  2825953 attattcaatgtatctaaaaagtcaattttctcttgtaaatagga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 41815278 - 41815334
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||  ||||||||    
T  41815278 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccgaagggagta 41815334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 7053741 - 7053799
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||| ||||||| |||||||| || | |||||||||||||||||| ||||||||||||    
T  7053741 attattcaatgtatttaaaaagtcaact-tctcttgtaaataggaccggagggagtatta 7053799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 7750011 - 7750057
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||    
T  7750011 attattcaatgtatctaaaaagtcaactttctcttgtaaataggacc 7750057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 21090469 - 21090511
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaatag 46  Q
    |||||||||||||| ||||||||||||||||| || |||||||    
T  21090469 attatttaatgtatttaaaaagtaaattgtcttttttaaatag 21090511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2825918 - 2825862
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||| ||| ||||||||||    
T  2825918 taaattatttaatgtatctaaaaa-aaaat--tctcttgtaaataagactagagggagta 2825862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 13789780 - 13789728
Alignment:
Q  11 aatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||| ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  13789780 aatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtatta 13789728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35922098 - 35922046
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccaga 53  Q
    |||||||||||||| ||||||||| | |||||| | |||||||||| ||||||    
T  35922098 taaattatttaatgaatctaaaaaattaattgtttattgtaaatagaaccaga 35922046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38393845 - 38393905
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||| ||| ||| |||||||| |||||| |||||||||||| ||| |||| |||||    
T  38393845 taaattattcaatatatttaaaaagtcaattgtttcttgtaaatagaaccggaggaagtat 38393905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11088 - 11026
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  11088 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaaaaggaccggagggagtatta 11026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 11123 - 11179
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| |||||||||    
T  11123 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagta 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29302 - 29243
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  29302 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 29243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 29337 - 29388
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagg 55  Q
    |||||| |||||||||||||||| || | |||||||||||||||||| ||||    
T  29337 attattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagg 29388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3730 - 3789
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  3730 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataaaaccagagggagta 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 492395 - 492456
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  492395 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagtatt 492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 492360 - 492303
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    |||||| |||||||||||||| | || | |||||| ||||||||||| ||||||||||    
T  492360 attattcaatgtatctaaaaaatcaactttctcttataaataggaccggagggagtat 492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 501 - 442
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||    
T  501 taaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacaagtgggagta 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 536 - 598
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaatt 66  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  536 attattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtattaatt 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38883 - 38821
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||    
T  38883 taaattatttaatgtatctaaaaagtaaattgtctcttgtaactaggaccggagatagtatta 38821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 38918 - 38981
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtattaattt 67  Q
    |||||| ||||||| ||||| || || |||||||||||||||||||| ||||||||||||||||    
T  38918 attattcaatgtatttaaaatgtcaactgtctcttgtaaataggaccggagggagtattaattt 38981  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 77435 - 77496
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||    
T  77435 taaattatttaatgtatctaaaaattaa-ttgtctcttataaataggaccggagggagtatta 77496  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 77403 - 77344
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 60  Q
    ||||||||| ||||||||| |||||| || | |||||| ||||||||||| |||||||||    
T  77403 taaattattcaatgtatctgaaaagtcaactttctcttataaataggaccggagggagta 77344  T

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Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15213 - 15165
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 49  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  15213 taaattatttaatgtatctaaaaagcaaattgtttattgtaaataggac 15165  T

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Target: scaffold0246; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 15247 - 15293
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 50  Q
    |||||| |||||||||||||||| || | ||||||||||||||||||    
T  15247 attattcaatgtatctaaaaagttaactttctcttgtaaataggacc 15293  T

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Target: scaffold0592 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 437 - 393
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||    
T  437 taaattatttaatatatctaaaaagtaaattttctcttataaata 393  T

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Target: scaffold0592; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 472 - 530
Alignment:
Q  4 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 62  Q
    |||||| |||||||||||||||| ||   |||||||||||||||| | |||||||||||    
T  472 attattcaatgtatctaaaaagtcaaccttctcttgtaaataggatcggagggagtatt 530  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5274 - 5214
Alignment:
Q  1 taaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 61  Q
    ||||||||||||| |||  |||||||||||||| |||||||||||| ||  ||||||||||    
T  5274 taaattatttaatatattaaaaaagtaaattgtttcttgtaaatagaactggagggagtat 5214  T

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Target: scaffold0314 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 17892 - 17844
Alignment:
Q  15 tatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 63  Q
    ||||||||||||||||||||  ||||||||| |||| ||| ||||||||    
T  17892 tatctaaaaagtaaattgtccattgtaaataagaccggagagagtatta 17844  T

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