View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3382_low_16 (Length: 236)

Name: NF3382_low_16
Description: NF3382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3382_low_16
NF3382_low_16
[»] scaffold0402 (1 HSPs)
scaffold0402 (14-227)||(6231-6444)
[»] scaffold0290 (1 HSPs)
scaffold0290 (36-229)||(20312-20505)
[»] chr8 (19 HSPs)
chr8 (14-229)||(22830245-22830460)
chr8 (36-225)||(22289384-22289576)
chr8 (39-229)||(22368303-22368493)
chr8 (39-229)||(11348626-11348816)
chr8 (39-229)||(21943135-21943325)
chr8 (18-223)||(21825734-21825939)
chr8 (61-225)||(21100540-21100703)
chr8 (77-231)||(22035237-22035391)
chr8 (76-226)||(16420306-16420456)
chr8 (76-163)||(8324557-8324644)
chr8 (76-163)||(22101331-22101418)
chr8 (100-223)||(25735370-25735493)
chr8 (76-163)||(21380514-21380601)
chr8 (84-130)||(20000746-20000792)
chr8 (78-163)||(17132220-17132305)
chr8 (180-229)||(20040886-20040935)
chr8 (178-227)||(45562294-45562343)
chr8 (100-152)||(20040806-20040858)
chr8 (180-228)||(21855589-21855637)
[»] chr1 (11 HSPs)
chr1 (39-227)||(8949125-8949313)
chr1 (36-229)||(8651368-8651561)
chr1 (36-229)||(19877352-19877545)
chr1 (39-226)||(3988427-3988615)
chr1 (56-226)||(22139001-22139171)
chr1 (36-229)||(19783349-19783542)
chr1 (40-198)||(20072614-20072772)
chr1 (39-225)||(16383983-16384169)
chr1 (18-223)||(21800361-21800566)
chr1 (180-227)||(22626844-22626891)
chr1 (84-150)||(21786165-21786231)
[»] chr7 (25 HSPs)
chr7 (1-227)||(20106621-20106847)
chr7 (39-229)||(15921669-15921859)
chr7 (39-229)||(15064107-15064297)
chr7 (39-229)||(823973-824163)
chr7 (39-226)||(16151211-16151398)
chr7 (18-229)||(16530358-16530572)
chr7 (18-229)||(16635090-16635304)
chr7 (18-229)||(16761463-16761671)
chr7 (18-223)||(18594956-18595161)
chr7 (18-223)||(18616523-18616728)
chr7 (18-223)||(13672179-13672384)
chr7 (114-167)||(12768768-12768821)
chr7 (157-226)||(15460464-15460533)
chr7 (164-229)||(12760867-12760932)
chr7 (84-229)||(13740767-13740912)
chr7 (84-221)||(4311083-4311220)
chr7 (84-229)||(8783811-8783956)
chr7 (178-226)||(11956667-11956715)
chr7 (84-154)||(12565423-12565493)
chr7 (80-226)||(48803569-48803714)
chr7 (76-225)||(13656292-13656441)
chr7 (76-163)||(8716285-8716372)
chr7 (76-163)||(18286046-18286133)
chr7 (100-229)||(23513416-23513545)
chr7 (84-160)||(14223348-14223424)
[»] chr3 (24 HSPs)
chr3 (49-229)||(17386111-17386292)
chr3 (39-226)||(4369020-4369207)
chr3 (39-226)||(16654035-16654222)
chr3 (39-226)||(18979642-18979829)
chr3 (39-226)||(20158134-20158321)
chr3 (39-226)||(22166012-22166199)
chr3 (15-227)||(3273077-3273289)
chr3 (36-222)||(12161769-12161955)
chr3 (40-225)||(12424057-12424241)
chr3 (39-217)||(10604241-10604419)
chr3 (18-223)||(3340879-3341084)
chr3 (36-223)||(11876016-11876203)
chr3 (39-142)||(13693309-13693412)
chr3 (18-223)||(15643401-15643606)
chr3 (18-223)||(10161875-10162080)
chr3 (39-130)||(14447243-14447334)
chr3 (18-223)||(13506202-13506406)
chr3 (76-163)||(13197135-13197222)
chr3 (76-229)||(12188781-12188934)
chr3 (76-229)||(12195195-12195348)
chr3 (76-163)||(13137875-13137962)
chr3 (76-163)||(13189123-13189210)
chr3 (76-163)||(15630662-15630749)
chr3 (180-229)||(13090624-13090673)
[»] scaffold0026 (2 HSPs)
scaffold0026 (39-229)||(131973-132163)
scaffold0026 (100-229)||(16717-16846)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-228)||(8136-8363)
[»] scaffold0346 (1 HSPs)
scaffold0346 (36-229)||(5269-5462)
[»] chr6 (19 HSPs)
chr6 (1-229)||(18446550-18446779)
chr6 (36-229)||(21562155-21562348)
chr6 (92-229)||(11218204-11218341)
chr6 (18-223)||(20017927-20018132)
chr6 (18-223)||(22167242-22167447)
chr6 (36-223)||(20168555-20168742)
chr6 (140-229)||(22581109-22581198)
chr6 (140-229)||(22583899-22583988)
chr6 (140-229)||(22588730-22588819)
chr6 (36-175)||(22768835-22768974)
chr6 (140-226)||(29684883-29684969)
chr6 (81-226)||(18010225-18010370)
chr6 (85-153)||(19587281-19587349)
chr6 (189-229)||(19589371-19589411)
chr6 (180-229)||(17817865-17817914)
chr6 (180-229)||(18852368-18852417)
chr6 (180-228)||(18189384-18189432)
chr6 (178-229)||(23519566-23519617)
chr6 (100-152)||(18852446-18852498)
[»] scaffold0230 (1 HSPs)
scaffold0230 (39-226)||(11800-11987)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-223)||(10510-10718)
scaffold0059 (1-223)||(18511-18719)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-223)||(234680-234888)
[»] chr4 (9 HSPs)
chr4 (39-226)||(15863851-15864038)
chr4 (39-226)||(3352938-3353125)
chr4 (18-223)||(15261746-15261951)
chr4 (18-223)||(13821231-13821436)
chr4 (18-229)||(16680711-16680922)
chr4 (84-227)||(11918419-11918562)
chr4 (84-229)||(45240580-45240725)
chr4 (76-163)||(15252766-15252853)
chr4 (78-223)||(12513575-12513720)
[»] scaffold0142 (1 HSPs)
scaffold0142 (39-226)||(22701-22888)
[»] scaffold0525 (1 HSPs)
scaffold0525 (40-226)||(465-651)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-226)||(21202-21427)
[»] chr5 (24 HSPs)
chr5 (39-223)||(20610164-20610348)
chr5 (39-226)||(18071230-18071417)
chr5 (39-223)||(20597548-20597732)
chr5 (39-223)||(20603845-20604029)
chr5 (38-226)||(22946777-22946965)
chr5 (39-226)||(26845986-26846173)
chr5 (5-229)||(25117820-25118044)
chr5 (5-229)||(25176911-25177135)
chr5 (40-219)||(20792492-20792671)
chr5 (18-229)||(30764791-30765002)
chr5 (61-223)||(20439894-20440056)
chr5 (40-225)||(23520857-23521042)
chr5 (18-223)||(24954864-24955069)
chr5 (84-226)||(21386656-21386798)
chr5 (76-163)||(22319189-22319276)
chr5 (84-154)||(18487790-18487860)
chr5 (100-225)||(20446581-20446706)
chr5 (180-229)||(21282726-21282775)
chr5 (180-229)||(24218183-24218232)
chr5 (76-163)||(15733955-15734042)
chr5 (76-163)||(23746472-23746559)
chr5 (76-163)||(25008489-25008576)
chr5 (180-229)||(24938889-24938938)
chr5 (100-160)||(24218252-24218312)
[»] scaffold0273 (1 HSPs)
scaffold0273 (56-226)||(23677-23847)
[»] scaffold0004 (2 HSPs)
scaffold0004 (36-223)||(19653-19840)
scaffold0004 (1-121)||(253453-253573)
[»] scaffold0506 (1 HSPs)
scaffold0506 (36-229)||(3746-3939)
[»] scaffold0202 (1 HSPs)
scaffold0202 (39-223)||(1513-1697)
[»] scaffold0051 (1 HSPs)
scaffold0051 (36-229)||(26082-26275)
[»] chr2 (16 HSPs)
chr2 (36-223)||(22870088-22870275)
chr2 (39-223)||(24821787-24821966)
chr2 (81-223)||(115854-115996)
chr2 (18-223)||(16773979-16774184)
chr2 (18-223)||(23161062-23161267)
chr2 (18-223)||(23572319-23572524)
chr2 (18-223)||(27629829-27630034)
chr2 (68-226)||(25369250-25369408)
chr2 (18-223)||(24796982-24797187)
chr2 (77-223)||(20306429-20306575)
chr2 (81-222)||(24169702-24169843)
chr2 (100-152)||(24500756-24500808)
chr2 (76-163)||(13308-13395)
chr2 (76-163)||(22046366-22046453)
chr2 (76-163)||(25355933-25356020)
chr2 (178-226)||(25372784-25372832)
[»] scaffold0037 (2 HSPs)
scaffold0037 (39-227)||(43788-43967)
scaffold0037 (39-227)||(51177-51356)
[»] scaffold0029 (1 HSPs)
scaffold0029 (99-226)||(121709-121836)
[»] scaffold1400 (1 HSPs)
scaffold1400 (18-223)||(133-338)
[»] scaffold0018 (1 HSPs)
scaffold0018 (39-223)||(19949-20128)
[»] scaffold0078 (1 HSPs)
scaffold0078 (5-223)||(28831-29049)
[»] scaffold0022 (1 HSPs)
scaffold0022 (18-223)||(23892-24097)
[»] scaffold1756 (1 HSPs)
scaffold1756 (126-229)||(1000-1103)
[»] scaffold0326 (2 HSPs)
scaffold0326 (150-229)||(7835-7914)
scaffold0326 (150-229)||(15737-15816)
[»] scaffold0375 (1 HSPs)
scaffold0375 (80-226)||(10887-11033)
[»] scaffold0020 (2 HSPs)
scaffold0020 (76-226)||(115001-115151)
scaffold0020 (76-226)||(119305-119455)
[»] scaffold0056 (1 HSPs)
scaffold0056 (81-225)||(41388-41532)
[»] scaffold0216 (1 HSPs)
scaffold0216 (76-227)||(9782-9932)
[»] scaffold0117 (1 HSPs)
scaffold0117 (80-226)||(33263-33409)
[»] scaffold0091 (1 HSPs)
scaffold0091 (81-225)||(54596-54740)
[»] scaffold0075 (1 HSPs)
scaffold0075 (80-163)||(32538-32621)
[»] scaffold0049 (1 HSPs)
scaffold0049 (61-112)||(37500-37551)
[»] scaffold0222 (1 HSPs)
scaffold0222 (84-154)||(18249-18319)
[»] scaffold0833 (1 HSPs)
scaffold0833 (78-163)||(4862-4947)
[»] scaffold0080 (1 HSPs)
scaffold0080 (76-163)||(50475-50562)
[»] scaffold0016 (1 HSPs)
scaffold0016 (144-223)||(195735-195814)
[»] scaffold0473 (1 HSPs)
scaffold0473 (76-226)||(12396-12546)
[»] scaffold0485 (1 HSPs)
scaffold0485 (99-160)||(11632-11693)
[»] scaffold0220 (1 HSPs)
scaffold0220 (180-229)||(12130-12179)
[»] scaffold0116 (1 HSPs)
scaffold0116 (81-226)||(39445-39590)
[»] scaffold0012 (2 HSPs)
scaffold0012 (180-229)||(13260-13309)
scaffold0012 (180-229)||(9151-9200)
[»] scaffold0566 (1 HSPs)
scaffold0566 (84-154)||(1029-1099)
[»] scaffold0384 (1 HSPs)
scaffold0384 (180-229)||(14888-14937)
[»] scaffold0157 (1 HSPs)
scaffold0157 (78-223)||(7187-7332)
[»] scaffold0242 (2 HSPs)
scaffold0242 (178-226)||(15824-15872)
scaffold0242 (178-226)||(24659-24707)


Alignment Details
Target: scaffold0402 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 6444 - 6231
Alignment:
Q  14 tatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacg 113  Q
    |||||| || |||||| || | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6444 tatataggtgatgatgccacccactactatctctcctttaccatcagacctattacctacataggaaaggtaatcaagcaagtaaaagcaaatgttaacg 6345  T
Q  114 gggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaa 213  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||    
T  6344 gggtggttattaagcatagcccataacataaaaagctcatctgtcctagtgttccacaattcagtcctaccccaaatggtgcaagccatcactctttgaa 6245  T
Q  214 ggtacctaagcaca 227  Q
    ||||||||||||||    
T  6244 ggtacctaagcaca 6231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 20312 - 20505
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20312 actactatctctcccttaccatcagacctattacctacatgggaaagataatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatagccc 20411  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||| ||||| |||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20412 acaacatgaagagttcatctgtcctagtgttttccaattcagtcctaccccaaatggtgcaagccataaccctttgaaggtacctaagcacagg 20505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 22830460 - 22830245
Alignment:
Q  14 tatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacg 113  Q
    ||||||||| |||||  || | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22830460 tatatatgtgatgataccacccactactatctctcccttaccatcagacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaaca 22830361  T
Q  114 gggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaa 213  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| |||||||||||||||||  || |||||| |||||||    
T  22830360 gggtggttattaagcatagcccacagcatgaaaagctcatctgtcctagtgttccccaattcagtcctaccccaaatggtgtcagccataactctttgaa 22830261  T
Q  214 ggtacctaagcacagg 229  Q
    |||||||||| |||||    
T  22830260 ggtacctaaggacagg 22830245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 36 - 225
Target Start/End: Complemental strand, 22289576 - 22289384
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggt---tattaagcatag 132  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  22289576 actactatctctcccttaccatcagacttattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggtggttattaagcatag 22289477  T
Q  133 cccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    |||||||||  || ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||    
T  22289476 cccacaacaagaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagccatcactctttgaaggtacctaagca 22289384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 22368493 - 22368303
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||| ||||||| |||||| | |||||||||| | || ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  22368493 actaactctcccctaccattagacctattaccgagatgggaaaggtaatcaagcaaggaaaagcaagtgttaacggggtggttgttaagcgtagcccaca 22368394  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22368393 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 22368303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 11348626 - 11348816
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||  | || ||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||    
T  11348626 actatctctcccctaccattagacctattactgagatgggaaaggtaatcaagcatggaaaagtaagtgttaacggggtggttgttaagcatagcccaca 11348725  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11348726 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 11348816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 21943135 - 21943325
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||| | || || |||||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||    
T  21943135 actatctctcccctaccattagacctattaccgagatggggaaggtaatcaagcaaggaaaagaaagtgttaacggggtggttgttaaacatagcccaca 21943234  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  21943235 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 21943325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 21825939 - 21825734
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | ||||| || |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| ||||||||||||||||    
T  21825939 tatgttatgataccaccaactacgatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 21825840  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  21825839 ggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaattcactccttccccaaatagtgcaagccataaccctttgaaggta 21825740  T
Q  218 cctaag 223  Q
    ||||||    
T  21825739 cctaag 21825734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 21100540 - 21100703
Alignment:
Q  61 acctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcct 160  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||| ||| ||||  |||| ||| |||||||||||| |||||| || ||||| |||||    
T  21100540 acctagtacctacatgggaaaggtaatcaagcaaataaaagcaagtttta-cgggacggttgttaggcatagcccacagcataaaaagttcatccgtcct 21100638  T
Q  161 agtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    |||||| ||||||||| | || |||||||| ||||||| ||| || | |||||||||||||||||    
T  21100639 agtgtttcccaattcagttcttccccaaatagtgcaagccatcactcgttgaaggtacctaagca 21100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 22035237 - 22035391
Alignment:
Q  77 ggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattca 176  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| |  ||||||||||| ||||| ||||| |||||  |||||||||| |  | ||||    
T  22035237 ggaaaggtagtcaagcaagtaaaagcaagtgttaacgggttggttgtgtagcatagcccataacatgaagagttcatcgttcctagtgtttcgtagttca 22035336  T
Q  177 atcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacaggtt 231  Q
     |||| |||| ||| ||||||| |||||||||||||||||||||| | |||||||    
T  22035337 gtccttcccctaatagtgcaagccataaccctttgaaggtacctatgtacaggtt 22035391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 16420306 - 16420456
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| | ||| |||||||| | |||||||| ||||  |||||| ||||| | ||||||||| ||||| ||||||||  | || | |||    
T  16420306 aggaaaggtaatcaagtaggtagaagcaagtatgaacggggttgttaccaagcattgcccaaagcataaagagttcatccgtcctagttgttcctacttc 16420405  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
     || |||||| ||||||| |||| ||| || ||||  ||||| ||||||||    
T  16420406 tattctaccctaaatggtacaagccatgactctttagaggtatctaagcac 16420456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 8324557 - 8324644
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||| ||||| | ||| || ||||| |||||||||| |||||||||||| ||||| | |||||| || ||||| ||||||||    
T  8324557 aggaaaggtagtcaagtaggtagaaacaagtattaacggggttgttattaagcattgcccaaagcataaaaagttcatccgtcctagt 8324644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 22101331 - 22101418
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| |||||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  22101331 aggaaaggtaatcaagtaggtagaagcaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 22101418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 25735493 - 25735370
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagt 199  Q
    ||||| ||||||| |||||||||| ||||||| ||||||||||| | |||||| | |||||  |  | || | |||  ||||| || | ||||||||||     
T  25735493 agcaaatgttaacagggtggttataaagcataacccacaacatatacagctcaacagtcctcatcattcctacttctttcctatcctatatggtgcaagc 25735394  T
Q  200 cataaccctttgaaggtacctaag 223  Q
    |||||||||||||| |||||||||    
T  25735393 cataaccctttgaaagtacctaag 25735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 21380601 - 21380514
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  21380601 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 21380514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 20000792 - 20000746
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcat 130  Q
    ||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  20000792 taatcaagcaagtaatagcaaatgttaacgtggtggttataaagcat 20000746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 17132305 - 17132220
Alignment:
Q  78 gaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  17132305 gaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatcagtcctagt 17132220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 20040886 - 20040935
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  20040886 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagg 20040935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 45562294 - 45562343
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcaca 227  Q
    |||||||| | |||||||||  ||||||||||||||||||||||| ||||    
T  45562294 tcctaccctatatggtgcaaaccataaccctttgaaggtacctaaacaca 45562343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 20040806 - 20040858
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctca 152  Q
    ||||| |||||||  ||||||||| ||||||||||||||||| ||| ||||||    
T  20040806 agcaaatgttaacatggtggttataaagcatagcccacaacaaaaatagctca 20040858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 21855589 - 21855637
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacag 228  Q
    |||||||| ||||||||||  |||||| | |||||||||||||||||||    
T  21855589 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacag 21855637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 39 - 227
Target Start/End: Original strand, 8949125 - 8949313
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8949125 actatctctcccttaccatcagaactattacctacatgggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatagcccaca 8949224  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcaca 227  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  8949225 acataaagagttcatctgtcctagtgttccccaattcagtccttccccaaatgttgcaagccataaacctttgaaggtacctaagcaca 8949313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 8651561 - 8651368
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||    
T  8651561 actactatatctcccttaccatcagacctattacctacatgggaaaggtaatcaagcatggaaaagtaagtgttaacggggtggttgttaagcatagccc 8651462  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||| ||||| |||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8651461 acaacattaagaggtcatttgtcctagtgttccccaattcagtactaccccaaatggtgcaagccataacccttttaaggtacctaagcacagg 8651368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 19877352 - 19877545
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    ||||||||||||||||||| ||||| ||||||||| |||| || ||| |||||||||||||||||||||||||| || || ||||||| |||||||||||    
T  19877352 actactatctctcccttacaatcatccctattaccaacatgggcaagataatcaagcaagtaaaagcaagtgttcacaggatggttatgaagcatagccc 19877451  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||||| ||||||| |||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  19877452 acaacataaaaagctcatatgtcctagtgtttcccaactcagtcctaccccatatggtgcaagccataaccctttgaaggtacctaagcacagg 19877545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 3988615 - 3988427
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgtt-aacggggtggttattaagcatagcccac 137  Q
    |||||||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||| || ||||||||| |||||||| ||||||    
T  3988615 actatctctcccctactatcaaacctattaccgacatgggaaaggtaatcaagcaagtaaaagcatgtgtttaatggggtggttgttaagcatggcccac 3988516  T
Q  138 aacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
     |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  3988515 gacatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 3988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 22139171 - 22139001
Alignment:
Q  56 atcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatct 155  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||  |||| ||||| |||||     
T  22139171 atcagacctattaccgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccatgacatgaagagttcatcc 22139072  T
Q  156 gtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22139071 gtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 22139001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 229
Target Start/End: Complemental strand, 19783542 - 19783349
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||| |  | ||||||||    
T  19783542 actactatttctcccttaccatcagacctatttcctatatgggaaaggtagtcaagcaagtaaaagcaagtgttaacggggtggttgtgcaacatagccc 19783443  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    | |  || ||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| |||||||||||||||||||||||| |||||    
T  19783442 atagtatgaagagttcatcactcctagtgttccctaattcagtccttccccaaatagtgcaagccataaccctttgaaggtacctaagtacagg 19783349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 20072614 - 20072772
Alignment:
Q  40 ctatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaa 139  Q
    |||||||||||||||||    ||||| ||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||||||||    
T  20072614 ctatctctcccttaccagttgacctagtacctacatgggaaaggtaatcaagcaaataaaagcaagtatttacgggatggttgttaagcatagcccacaa 20072713  T
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaag 198  Q
    ||||||  | ||||| ||||||||||| ||||||||  | ||||| ||||| |||||||    
T  20072714 cataaaaggttcatccgtcctagtgtttcccaattcggttctacctcaaatagtgcaag 20072772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 225
Target Start/End: Original strand, 16383983 - 16384169
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||| ||||| | |||| |||| ||||| ||| | ||||| |||||||||| ||||||| ||||||| || || || | ||||||||||||||| |    
T  16383983 actatctcaccctttctatcagacctcttaccaacagaagaaagataatcaagcatgtaaaagaaagtgttcacaggatgatcattaagcatagcccaaa 16384082  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
     ||||||||||||||||||||||||    || || ||  |||||||||| |||||||||| ||||||||||  ||| ||||||||||    
T  16384083 gcataaagagctcatctgtcctagttggtcctaactctttcctaccccagatggtgcaagccataacccttacaagatacctaagca 16384169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 21800361 - 21800566
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  21800361 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 21800460  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  | ||||||||| | ||| ||||| |||||  ||||||||||||| |||||  |||  |||| |||||| ||||  |||||||||||||||||    
T  21800461 ggttgtgcaacatagcccaaatcatgaagagttcatcattcctagtgttccctaattctttccgtcccctaatggtacaagctataaccctttgaaggta 21800560  T
Q  218 cctaag 223  Q
    ||||||    
T  21800561 cctaag 21800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 22626844 - 22626891
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcaca 227  Q
    |||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  22626844 ctaccccatatggtgcaagtcaaaactctttcaaggtacctaagcaca 22626891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 21786165 - 21786231
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagct 150  Q
    ||||||||||| ||| ||||| ||||||   | ||||||| ||||||||||||||||||||| ||||    
T  21786165 taatcaagcaaataatagcaaatgttaataagatggttataaagcatagcccacaacataaacagct 21786231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20106847 - 20106621
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||||| ||| ||| ||||| |||||  || | || || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  20106847 ccaatttcctagctatgtatgtgatgataccacctaccaccatctctcccttaccatcagacctattacctacatgggaaaggtaatcaagcaagtaaaa 20106748  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||||||||||| ||||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||| ||||||| |||||||| |||||||||||| |    
T  20106747 gcaagtgttaatggggtggttgttaagcatagcccacgacatgaagatttcatctgtcctagtgttcctcaattcagtcctacccaaaatggtgcaagcc 20106648  T
Q  201 ataaccctttgaaggtacctaagcaca 227  Q
    |||||||| ||||||||||||||||||    
T  20106647 ataaccctctgaaggtacctaagcaca 20106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 15921669 - 15921859
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||| | || ||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||    
T  15921669 actatctctcccctaccattagacctattaccgagatgggaaaggtaatcaagcatggaaaagtaagtgttaacggggtggttgttaagcatagcccaca 15921768  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15921769 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 15921859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 15064297 - 15064107
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||| | || ||||| ||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||    
T  15064297 actatctctcccctaccattagacctattaccgagatgggaaaagtaatcaagcatggaaaagtaagtgttaacggggtggttgttaagcatagcccaca 15064198  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15064197 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 15064107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 824163 - 823973
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||| | || ||||||||||||||||||| ||||| ||||||||| ||||||||| |||||| ||||||| |    
T  824163 actatctctcccctaccattagacctattaccgagatgggaaaggtaatcaagcaaggaaaagtaagtgttaatggggtggttgttaagcgtagcccata 824064  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| ||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  824063 acatgaagagttcatcagttatagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 823973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 16151211 - 16151398
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    ||||||||| || ||| |||| ||||||||||  ||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  16151211 actatctcttccctactatcaaacctattaccgtcacgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacg 16151310  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16151311 acatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 16151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 16530572 - 16530358
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| ||||||||||||||||    
T  16530572 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 16530473  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtg---ttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaag 214  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||   ||||| |||||| |||| |||||||| ||||||| |||||||||||||||    
T  16530472 ggttgtgcagcatagcccaaagcatgaagagttcatcgctcctagtgtaattccctaattcactccttccccaaatagtgcaagccataaccctttgaag 16530373  T
Q  215 gtacctaagcacagg 229  Q
    ||||||||| |||||    
T  16530372 gtacctaagtacagg 16530358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 16635090 - 16635304
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| ||||||||||||||||    
T  16635090 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 16635189  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtg---ttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaag 214  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||   ||||| |||||| |||| |||||||| ||||||| |||||||||||||||    
T  16635190 ggttgtgcagcatagcccaaagcatgaagagttcatcgctcctagtgtaattccctaattcactccttccccaaatagtgcaagccataaccctttgaag 16635289  T
Q  215 gtacctaagcacagg 229  Q
    ||||||||| |||||    
T  16635290 gtacctaagtacagg 16635304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 16761463 - 16761671
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  |||||||  ||| || ||||||||| ||||| |||||||| ||||||||||||||||    
T  16761463 tatgttatgataccaccaactactatttctcccctactatcggacctatttactatatgggaaaggtagtcaagtaagtaaaaacaagtgttaacggggt 16761562  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| ||||| ||||| |||||  ||||||||||||| |||||| |||| ||||||   ||||||| ||||||| ||||||||||    
T  16761563 ggttgtgcagcatagcccaaaacatgaagagttcatcgctcctagtgttccctaattcactccttccccaa---gtgcaagccataaccatttgaaggta 16761659  T
Q  218 cctaagcacagg 229  Q
    |||||| |||||    
T  16761660 cctaagtacagg 16761671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 18594956 - 18595161
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  18594956 tatgttatgataccaccaactactatttctcccctactatctgacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 18595055  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  18595056 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 18595155  T
Q  218 cctaag 223  Q
    ||||||    
T  18595156 cctaag 18595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 18616728 - 18616523
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  18616728 tatgttatgataccaccaactactatttctcccctactatctgacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 18616629  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  18616628 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 18616529  T
Q  218 cctaag 223  Q
    ||||||    
T  18616528 cctaag 18616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 13672384 - 13672179
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  13672384 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 13672285  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  | ||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  13672284 ggttgtgcaacatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 13672185  T
Q  218 cctaag 223  Q
    ||||||    
T  13672184 cctaag 13672179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 12768821 - 12768768
Alignment:
Q  114 gggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12768821 gggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttc 12768768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 15460533 - 15460464
Alignment:
Q  157 tcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  15460533 tcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaagatacctaagcac 15460464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 12760932 - 12760867
Alignment:
Q  164 gttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||||||||||    
T  12760932 gttccccaattcagtcctactctaaatagtgcaagtcataaccctttgaaggtacttaagcacagg 12760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 13740912 - 13740767
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    |||| |||||| ||| ||||| |||||||  ||||||||| |||||||||||||| |||||| ||| || | |||||  |  | || |  ||  | ||||    
T  13740912 taataaagcaaataatagcaaatgttaacatggtggttataaagcatagcccacatcataaatagcacaacagtcctcatcattcctacctcttttctac 13740813  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||    
T  13740812 cccatatggtgcaagccataaccctttgaaggtacctaagcacagg 13740767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 4311220 - 4311083
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    ||||||||||| ||| | ||| |||||||  ||||||||| ||||||||||||||||||||| |||||||  |||||  |  | || |  ||  ||||||    
T  4311220 taatcaagcaaataataacaaatgttaacatggtggttataaagcatagcccacaacataaacagctcattggtcctcatcattcctacatctttcctac 4311121  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtaccta 221  Q
    |||| ||||||||||  ||||| |||||||||||||||    
T  4311120 cccatatggtgcaagcgataactctttgaaggtaccta 4311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 8783811 - 8783956
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    ||||||||||| ||| ||||| |||||||  ||||||||| ||   |||||||||| ||||| |||||||| |||||  |  | || |  ||  ||||||    
T  8783811 taatcaagcaaataatagcaaatgttaacatggtggttataaattgtagcccacaagataaacagctcatcagtcctcattattcctacctctttcctac 8783910  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||    
T  8783911 cttatatggtgcaagccataaccctttgaaggtacctaagcacagg 8783956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 11956667 - 11956715
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11956667 tcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 11956715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 12565493 - 12565423
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatc 154  Q
    ||||||||||| ||| ||||| | ||||  || ||||||| ||||||||||||||||||||| ||||||||    
T  12565493 taatcaagcaaataatagcaaattttaataggatggttataaagcatagcccacaacataaacagctcatc 12565423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 48803569 - 48803714
Alignment:
Q  80 aaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatc 179  Q
    |||||||||||| | ||| || ||||| || ||| |||  ||| ||||||| ||||| | ||||||||| ||||| ||||||||  | || |  ||  ||    
T  48803569 aaggtaatcaagtaggtagaaacaagtattcacgaggttattactaagcattgcccaaagcataaagagttcatccgtcctagttgttcctacctctttc 48803668  T
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||||||||| |||| ||| || ||||||||||||||||||||    
T  48803669 ctaccccaaatggtacaag-catgactctttgaaggtacctaagcac 48803714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 13656441 - 13656292
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| | ||| |||||||| | | |||||| |||| ||||||| ||||| | || |||||| ||||| ||||||||  | || |  ||    
T  13656441 aggaaaggtaatcaagtaggtagaagcaagtatgagcggggttgttactaagcattgcccaaagcagaaagagttcatccgtcctagttgttcctacctc 13656342  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
      | |||||||||||||| |||| ||| || ||||| ||||| |||||||    
T  13656341 ttttctaccccaaatggtacaagccatgactctttggaggtatctaagca 13656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 8716372 - 8716285
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  8716372 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 8716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 18286133 - 18286046
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  18286133 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaaccataaaaagttcatccgtcctagt 18286046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 23513545 - 23513416
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagt 199  Q
    ||||| |||||||  ||||||||| ||||||||||||||||| ||| |||||| |  ||||  |  | || |  ||  | |||||||| ||||||||||     
T  23513545 agcaaatgttaacatggtggttataaagcatagcccacaacaaaaatagctcaacattcctcatcattcctacctcttttctaccccatatggtgcaagc 23513446  T
Q  200 cataaccctttgaaggtacctaagcacagg 229  Q
     |||||| | ||||||||||||||||||||    
T  23513445 aataaccatgtgaaggtacctaagcacagg 23513416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 14223348 - 14223424
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcct 160  Q
    ||||||||||| ||| ||||| |||||||  ||||||||| ||||||  | || |||||||| |||||||| |||||    
T  14223348 taatcaagcaaataatagcaaatgttaacatggtggttataaagcatgtctcataacataaatagctcatcagtcct 14223424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 49 - 229
Target Start/End: Complemental strand, 17386292 - 17386111
Alignment:
Q  49 ccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaac-ggggtggttattaagcatagcccacaacataaaga 147  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||    
T  17386292 ccttaccatcagaccttttacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacaggggtggttgttaagcatagcccataacatgaaga 17386193  T
Q  148 gctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| | |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  17386192 gctcgtatgtcctagtgttccccaattcagtcctacctcaaatggtgcaagccataaccctttgaaggtacctaagcacagg 17386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 4369207 - 4369020
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  4369207 actatctctcccctactatcaaacctattatcgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacg 4369108  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  4369107 acatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 4369020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 16654222 - 16654035
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||     
T  16654222 actatctctcccctactatcaaacctattaccgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaaccgggtggttgttaagcatggcccacg 16654123  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||| | |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16654122 acatgaagagttcatccgtcctagtgttacacaattcgatcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 16654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 18979642 - 18979829
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||      
T  18979642 actatctctcccatactatcaaacctattacagacatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccaag 18979741  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18979742 acatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 18979829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 20158134 - 20158321
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||  |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  20158134 actatctctcccctaccatctgacctattaccgacatggaaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatggcccaca 20158233  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| | ||||||||||||||||||| || |||||||||| ||||||| |||| ||||||||||||| ||| ||||    
T  20158234 acatgaagagttcatcggccctagtgttccccaattcagtcataccccaaatagtgcaagccatagccctttgaaggtaactatgcac 20158321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 22166012 - 22166199
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||     
T  22166012 actatctctcccgtactatcaaacctattaccgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacgaggtggttgttaagcatggcccacg 22166111  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||| ||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22166112 acatgaagagttcatccgtcctagtgttcctcaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 22166199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 3273289 - 3273077
Alignment:
Q  15 atatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacgg 114  Q
    |||||||| |||||  || | |||||||||||||||||||  ||| |||||||||||||||||| ||| ||||||||  |||| ||||||||||| ||      
T  3273289 atatatgtgatgataccacctactactatctctcccttactgtcagacctattacctacataggcaagataatcaagatagtagaagcaagtgttcacat 3273190  T
Q  115 ggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaag 214  Q
    | |||||||||||||||||||||||||| || ||||||| |||||||||||| || || ||| |||||||||| |||||||||| |||||||||||||||    
T  3273189 gatggttattaagcatagcccacaacatgaaaagctcatatgtcctagtgtttcctaactcagtcctaccccagatggtgcaagccataaccctttgaag 3273090  T
Q  215 gtacctaagcaca 227  Q
     ||||||||||||    
T  3273089 atacctaagcaca 3273077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 36 - 222
Target Start/End: Original strand, 12161769 - 12161955
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||  ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  12161769 actactatttctcccttaccatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaagcaagtgttaacggggtggttgtgcagcatagccc 12161868  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaa 222  Q
    | ||||| ||||| |||||  ||||||||||||| |||||| |||| ||| |||| ||||||| |||||||||||||||||||||||    
T  12161869 ataacatgaagagttcatcgctcctagtgttccctaattcactccttcccaaaatagtgcaagccataaccctttgaaggtacctaa 12161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 12424057 - 12424241
Alignment:
Q  40 ctatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaa 139  Q
    |||||||||||| || |||| |||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||  |||||||| |||||| |    
T  12424057 ctatctctccct-actatcagacctattaccgacatgggaaaggtaattaagcaagtaaaagcatgtgttaacggggtggtcgttaagcatggcccacga 12424155  T
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    ||| ||||| |||||  |||||||||||| ||||||  ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  12424156 catgaagagttcatccatcctagtgttccacaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggcacctaagca 12424241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 217
Target Start/End: Original strand, 10604241 - 10604419
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  10604241 actatctctcccctactatcaaacctattaccatcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacg 10604340  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| ||||| |||||  ||||||||||||||| |||  ||||||||||||| |||| |||||| ||  ||||||||||    
T  10604341 acatgaagagttcatccttcctagtgttccccacttcggtcctaccccaaatagtgccagtcattactttttgaaggta 10604419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 3340879 - 3341084
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| ||||||||||||||||    
T  3340879 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 3340978  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| ||||||||||||||||||    
T  3340979 ggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaattcactccttccccaaatagtgcaagccataaccctttgaaggta 3341078  T
Q  218 cctaag 223  Q
    ||||||    
T  3341079 cctaag 3341084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 11876016 - 11876203
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| ||||| || | ||||||||    
T  11876016 actactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggttggtttttcaacatagccc 11876115  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    | | ||| ||||| |||||  ||||||||||||| |||||  |||  |||| |||||| |||| ||||||||||||||||||||||||    
T  11876116 aaatcatgaagagttcatcattcctagtgttccctaattctttccgtcccctaatggtacaagccataaccctttgaaggtacctaag 11876203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 13693412 - 13693309
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||| || ||||| |||||||    
T  13693412 actatctctcccctaccatcagacctattacctacatgggaaaggtagtcaagcatgtaaaagcaagtattaacggggtggttgtttagcatggcccaca 13693313  T
Q  139 acat 142  Q
    ||||    
T  13693312 acat 13693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 15643606 - 15643401
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  15643606 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 15643507  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||  |||  |||| |||||| ||||  |||||||||||||||||    
T  15643506 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctaattctttccgtcccctaatggtacaagctataaccctttgaaggta 15643407  T
Q  218 cctaag 223  Q
    ||||||    
T  15643406 cctaag 15643401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 10161875 - 10162080
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  10161875 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 10161974  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  | ||||||||| | ||| ||||| |||||  ||||||||||||| |||||  |||  |||| |||||| ||||  |||||||||||||||||    
T  10161975 ggttgtgcaacatagcccaaatcatgaagagttcatcattcctagtgttccctaattctttccgtcccctaatggtacaagctataaccctttgaaggta 10162074  T
Q  218 cctaag 223  Q
    ||||||    
T  10162075 cctaag 10162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 14447243 - 14447334
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcat 130  Q
    ||||||||||||  ||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  14447243 actatctctccccaactgtcagacctattacctacatgggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttgttgagcat 14447334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 13506202 - 13506406
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| ||||||  || |||  ||||||| |||| |  ||||||||| |||||||||||||| ||||||||||| ||||    
T  13506202 tatgttatgataccaccaactactatttctccccgactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaac-gggt 13506300  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
     ||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | ||   |||| | || ||| ||||||| ||||||||||||||||||    
T  13506301 tgttgtgcagcatagcccaaagcatgaagagttcatcgttcctagtgttccctagttttgtccttctcctaatagtgcaagccataaccctttgaaggta 13506400  T
Q  218 cctaag 223  Q
    ||||||    
T  13506401 cctaag 13506406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 13197135 - 13197222
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| |||||||| | |||| ||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||    
T  13197135 aggaaaggtaatcaagtaggtagaagcaagtatgaacgaggttgttactaagcattgcccaaagcataaagagttcatccgtcctagt 13197222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 12188781 - 12188934
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||| ||||| | ||| || ||||| |||||||| | |||||||||||| ||||| | |||||| || ||||| ||||||||  | || | |||    
T  12188781 aggaaaggtagtcaagtaggtagaaacaagtattaacgggattgttattaagcattgcccaaagcataaaaagttcatccgtcctagttgttcctacttc 12188880  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
      | ||||||||||| || |||| ||| || || || ||||| |||||||||||    
T  12188881 ttttctaccccaaattgtacaagccatgactctctggaggtatctaagcacagg 12188934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 12195195 - 12195348
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||| ||||| | ||| || ||||| |||||||| | |||||||||||| ||||| | |||||| || ||||| ||||||||  | || | |||    
T  12195195 aggaaaggtagtcaagtaggtagaaacaagtattaacgggattgttattaagcattgcccaaagcataaaaagttcatccgtcctagttgttcctacttc 12195294  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
      | ||||||||||| || |||| ||| || || || ||||| |||||||||||    
T  12195295 ttttctaccccaaattgtacaagccatgactctctggaggtatctaagcacagg 12195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 13137875 - 13137962
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  13137875 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 13137962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 13189123 - 13189210
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||| ||||| | ||| || ||||| |||||||| | |||||||||||| ||||| | |||||| || ||||| ||||||||    
T  13189123 aggaaaggtagtcaagtaggtagaaacaagtattaacgggattgttattaagcattgcccaaagcataaaaagttcatccgtcctagt 13189210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 15630662 - 15630749
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  15630662 aggaaaggtaatcaagtaggtataaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 15630749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 13090624 - 13090673
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  13090624 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagg 13090673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 132163 - 131973
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||| | |||||||||| | || ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  132163 actatctctcccctaccattagacctattaccgagatgggaaaggtaatcaagcaaggaaaagcatgtgttaacggggtggttgttaagcatagcccaca 132064  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  132063 acatgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattgtgcaagccataaccctttgaaggtacctaagcacagg 131973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 16846 - 16717
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagt 199  Q
    ||||| |||||||  ||||||||| |||||||||||||||||||||  ||||| | |||||  |  | |  |  ||  | |||||||| ||||||||||     
T  16846 agcaaatgttaacatggtggttataaagcatagcccacaacataaacggctcaacagtccttatcattcatacctctttgctaccccatatggtgcaagc 16747  T
Q  200 cataaccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||||||||||||||||||||    
T  16746 cataaccctttgaaggtacctaagcacagg 16717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 8136 - 8363
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||| | ||| ||| |||||||||||  || | || |||||||||||| |||||||| ||||| ||||||||| ||||||||| ||||||| ||||||    
T  8136 ccaattgcctagctatgtatgttatgataccacctacaactatctctcccctaccatcagacctactacctacatgggaaaggtagtcaagcatgtaaaa 8235  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    |||||| |||||||||||||| || ||||| ||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||| | |||||||||| |    
T  8236 gcaagtattaacggggtggttgtttagcatggcccacaacatgaagagttcatttgtcctagtgttccccaattcgatcctaccctagatggtgcaagcc 8335  T
Q  201 ataaccctttgaaggtacctaagcacag 228  Q
    ||||||||||||||||||||||||||||    
T  8336 ataaccctttgaaggtacctaagcacag 8363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 5269 - 5462
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| |||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||| |  ||||||||||    
T  5269 actactatttctcccttaccatcagacctattacctatattggaaaggtagtcaagtaagtaaaagcaagtgttaacggggtggttgtgcagcatagccc 5368  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||| ||||| || || ||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  5369 acaacatgaagagttcgtcggtcctagtgttccccaattcggtcctacccctaatggtgcaagccataaccctttgaaggtacctaagtacagg 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18446779 - 18446550
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||||| ||| ||| ||||| |||||  || | || |||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||| ||||    
T  18446779 ccaatttcctagctatttatgtgatgataccacctaccactatctctcccctaccatcagacctattacctacctgggaaaggtaatcaagcaaggaaaa 18446680  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||| ||||| || ||||||||||||||||||||||||||||||||  |||||| |    
T  18446679 gcaagtgttaatggggtggttgttaagcatagcccacaacgtgaagagttcatcagttctagtgttccccaattcaatcctaccccaaattatgcaagcc 18446580  T
Q  201 ataaccc-tttgaaggtacctaagcacagg 229  Q
    ||||||| ||||||||||| ||||||||||    
T  18446579 ataacccttttgaaggtacttaagcacagg 18446550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 21562155 - 21562348
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| ||||||| |||| || ||||||||| ||||| ||||||||||||||||||||||||||||| |  | ||||||||    
T  21562155 actactatttctcccttaccatcagacctatttcctatatgggaaaggtagtcaagaaagtaaaagcaagtgttaacggggtggttgtacaacatagccc 21562254  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    | ||||| ||||| |||||  ||||||||||||| |||||| |||| || ||||| ||||||| ||||||||||| |||||||||||| |||||    
T  21562255 ataacatgaagagttcatcgctcctagtgttccctaattcagtccttccgcaaatagtgcaagccataaccctttaaaggtacctaagtacagg 21562348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 11218341 - 11218204
Alignment:
Q  92 caagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatg 191  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||| |||||  ||||||||||||| ||||||||||| ||||||||     
T  11218341 caagtaaaagcaagtgttaacggggtggttatgcagcatagcccataacatgaagagttcatcgctcctagtgttccctaattcaatccttccccaaata 11218242  T
Q  192 gtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  11218241 gtgcaagccataaccctttgaaggtacctaagtacagg 11218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 20017927 - 20018132
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  20017927 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 20018026  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  20018027 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 20018126  T
Q  218 cctaag 223  Q
    ||||||    
T  20018127 cctaag 20018132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 22167242 - 22167447
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  22167242 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 22167341  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  22167342 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 22167441  T
Q  218 cctaag 223  Q
    ||||||    
T  22167442 cctaag 22167447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 20168742 - 20168555
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |||||    | ||||||||    
T  20168742 actactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggttggttgcacaacatagccc 20168643  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    | | ||| ||||| |||||  ||||||||||||| |||||  |||  |||| |||||| ||||  |||||||| ||||||||||||||    
T  20168642 aaatcatgaagagttcatcattcctagtgttccctaattctttccgtcccctaatggtacaagctataaccctctgaaggtacctaag 20168555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 22581109 - 22581198
Alignment:
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||| ||||||||||||| ||||||||| || ||| ||| |||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  22581109 cataaaaagctcatctgtcccagtgttccctaactcagtccaaccccagatggtgcaaaccataaccctttaaaggtacctaagcacagg 22581198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 22583899 - 22583988
Alignment:
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||| ||||||||||||| ||||||||| || ||| ||| |||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  22583899 cataaaaagctcatctgtcccagtgttccctaactcagtccaaccccagatggtgcaaaccataaccctttaaaggtacctaagcacagg 22583988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 22588730 - 22588819
Alignment:
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||| ||||||||||||| ||||||||| || ||| ||| |||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  22588730 cataaaaagctcatctgtcccagtgttccctaactcagtccaaccccagatggtgcaaaccataaccctttaaaggtacctaagcacagg 22588819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 22768835 - 22768974
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||  ||||| |  | ||||||||    
T  22768835 actactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatggtttggttgtgcaacatagccc 22768934  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    | | ||| ||||| |||||  |||||||||||||||||||    
T  22768935 aaagcatgaagagttcatcattcctagtgttccccaattc 22768974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 29684969 - 29684883
Alignment:
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||| |||||||| ||||||||   ||| | |||  ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  29684969 cataaatagctcatcagtcctagttgcccctatttccttcctaccccaaatagtgcaagccataaccctttgaaggtacctaagcac 29684883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 18010370 - 18010225
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcc 180  Q
    ||||||||||| ||||| || ||||| || ||||||| |||| ||||||| ||||| | |||||| || ||||| || |||||  | || |  ||  |||    
T  18010370 aggtaatcaagtaagtagaaacaagtattcacggggttgttactaagcatcgcccaaagcataaaaagttcatccgttctagttgttcctacgtctttcc 18010271  T
Q  181 taccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    ||||||||||||| |||| ||| |||||||| ||||||||||||||    
T  18010270 taccccaaatggtacaagccatgaccctttgtaggtacctaagcac 18010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 19587281 - 19587349
Alignment:
Q  85 aatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcat 153  Q
    |||||||||| ||| ||||| | |||||  ||||||||| ||||||||||||||||||||| |||||||    
T  19587281 aatcaagcaaataatagcaaattttaacatggtggttataaagcatagcccacaacataaacagctcat 19587349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 19589371 - 19589411
Alignment:
Q  189 atggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19589371 atggtgcaagccataaccctttgaaggtacctaagcacagg 19589411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 17817914 - 17817865
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  17817914 ctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 17817865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 18852417 - 18852368
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  18852417 ctaccccatatggtgcaagccataaccatgtgaaggtacctaagcacagg 18852368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 18189384 - 18189432
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacag 228  Q
    |||||||| ||  |||||| |||||||||||||||||||||||||||||    
T  18189384 ctaccccatattatgcaagccataaccctttgaaggtacctaagcacag 18189432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 23519566 - 23519617
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||||| |||||||||  ||||||||| |||||||| |||||||||||    
T  23519566 tcctaccccatatggtgcaaaccataaccctctgaaggtagctaagcacagg 23519617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 18852498 - 18852446
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctca 152  Q
    ||||| |||||||  ||||||||| ||||||| ||||||||||||| ||||||    
T  18852498 agcaaatgttaacatggtggttataaagcataacccacaacataaacagctca 18852446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 11987 - 11800
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||     
T  11987 actatctctcccctactatcaaacctattaccgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacg 11888  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11887 acatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 11800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10718 - 10510
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||| | ||| ||||||||| |||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||                  
T  10718 ccaattgcctagctatatatgtgatgataccaccgactactatctctcccttaccatcagacctattacctacataggaaaggtaa-------------- 10633  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |    
T  10632 gcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagcc 10533  T
Q  201 ataaccctttgaaggtacctaag 223  Q
    |||||||||||||||||||||||    
T  10532 ataaccctttgaaggtacctaag 10510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 18719 - 18511
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||| | ||| ||||||||| |||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||                  
T  18719 ccaattgcctagctatatatgtgatgataccaccgactactatctctcccttaccatcagacctattacctacataggaaaggtaa-------------- 18634  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |    
T  18633 gcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagcc 18534  T
Q  201 ataaccctttgaaggtacctaag 223  Q
    |||||||||||||||||||||||    
T  18533 ataaccctttgaaggtacctaag 18511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 234680 - 234888
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||| | ||| ||||||||| |||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||                  
T  234680 ccaattgcctagctatatatgtgatgataccaccgactactatctctcccttaccatcagacctattacctacataggaaaggtaa-------------- 234765  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |    
T  234766 gcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagcc 234865  T
Q  201 ataaccctttgaaggtacctaag 223  Q
    |||||||||||||||||||||||    
T  234866 ataaccctttgaaggtacctaag 234888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 15864038 - 15863851
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    ||||||||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  15864038 actatctcttccttaccatcagacatattacctacatgggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatggcccaca 15863939  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| || || ||||| ||||||||||| || |||||||| || |||||||| ||||||| |||||||| ||||||||||||||||||    
T  15863938 acatgaatagttcatccgtcctagtgtttcctaattcaattctcccccaaatagtgcaagccataacccgttgaaggtacctaagcac 15863851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 3353125 - 3352938
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||  |||||||||| |||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||  ||||||    
T  3353125 actatctctcccctaccatccgacctattaccgacatgggaaaggtaagcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatgacccaca 3353026  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  3353025 acatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagccattaccctttgaaggtacctaagcac 3352938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 15261746 - 15261951
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | ||||| || |||||| ||| |||  ||||||| |||| |  ||||||||  | |||||||||||| ||||||||||||||||    
T  15261746 tatgttatgataccaccaactacgatttctcccctactatcggacctatttcctataagggaaaggttgttaagcaagtaaaaacaagtgttaacggggt 15261845  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| ||| || |||| |||||||| ||||||| ||||||||||||||||||    
T  15261846 ggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaatccactccttccccaaatagtgcaagccataaccctttgaaggta 15261945  T
Q  218 cctaag 223  Q
    ||||||    
T  15261946 cctaag 15261951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 13821436 - 13821231
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  13821436 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 13821337  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  13821336 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 13821237  T
Q  218 cctaag 223  Q
    ||||||    
T  13821236 cctaag 13821231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 16680922 - 16680711
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| ||   ||||||| |||| || |||||||||  ||||||||||||| |||||||||||||||     
T  16680922 tatgttatgataccaccaactactatttctcccctactattggacctatttcctatatgggaaaggtagccaagcaagtaaaaacaagtgttaacggggg 16680823  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    | || |  ||||||||||| | ||| ||||  |||||  ||||||||||||| |||||| |||| |||||||| ||  ||| ||||||||||||||||||    
T  16680822 gcttgtgcagcatagcccaaagcatgaagatttcatcactcctagtgttccctaattcactccttccccaaatagtaaaagccataaccctttgaaggta 16680723  T
Q  218 cctaagcacagg 229  Q
    |||||| |||||    
T  16680722 cctaagtacagg 16680711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 227
Target Start/End: Original strand, 11918419 - 11918562
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    ||||||||||| ||  |||||||||| || ||| |||| |  ||||| ||||| |||||||| || ||||| |||||  |  |||||| |||  ||||||    
T  11918419 taatcaagcaaatagtagcaagtgttcacagggcggttgtagagcattgcccataacataaacagttcatcagtcctcatcatccccacttctttcctac 11918518  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtacctaagcaca 227  Q
    || | |||||||||| ||||||||||||||||||||||||||||    
T  11918519 cctatatggtgcaagccataaccctttgaaggtacctaagcaca 11918562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 45240580 - 45240725
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    |||| |||||| ||| ||||| |||||||  ||||||||| ||||||||||||||||||||| |||||| | |||||  |  | || |  ||  | ||||    
T  45240580 taataaagcaaataatagcaaatgttaacatggtggttataaagcatagcccacaacataaacagctcaacagtcctcatcattcctacctcttttctac 45240679  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||    
T  45240680 cccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 45240725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 15252853 - 15252766
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  15252853 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 15252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 12513720 - 12513575
Alignment:
Q  78 gaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaa 177  Q
    ||||| |||| |||||||||||| || ||||| || | | | || ||||||||||||||||||||||| | |||||| |  |||||    |||| ||       
T  12513720 gaaagataattaagcaagtaaaaacaggtgttcacagagagattgttaagcatagcccacaacataaacaactcatccgctctagtcggtcccactttcg 12513621  T
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    ||||||||||||||||||| | |||||  ||||||| ||| |||||    
T  12513620 tcctaccccaaatggtgcatgccataaaactttgaatgtatctaag 12513575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 22701 - 22888
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||||| |||| ||||| ||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||     
T  22701 actatctctcccctactatcagacctattaccgacatgggaaaagtaatcaagcaagtaaaagcatgtgttaacagggtggttgttaagcatggcccacg 22800  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| || || ||||| ||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22801 acatgaaaagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 22888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 651 - 465
Alignment:
Q  40 ctatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaa 139  Q
    ||||||||||| | | |||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |    
T  651 ctatctctcccctgctatcaaacctattaccgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacga 552  T
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
     || ||||| ||||| ||||||||||||| ||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  551 tatgaagagttcatccgtcctagtgttccacaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 21427 - 21202
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||||| ||| ||| ||||| |||||  || | || |||||||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||||||    
T  21427 ccaatttcctagctatgtatgtgatgataccacccacaactatctctcccctactatcagacctattaccgacatgggaaaggtaatcaagcaagtaaaa 21328  T
Q  101 gcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtc 200  Q
    ||| ||||||||||||| ||| |||||||| |||||  |||| ||||| | |||  |||||||||||||||||||  ||||||||||||| |||||||||    
T  21327 gcatgtgttaacggggttgttgttaagcatggcccatgacatgaagagtttatccttcctagtgttccccaattcggtcctaccccaaatagtgcaagtc 21228  T
Q  201 ataaccctttgaaggtacctaagcac 226  Q
    || |||||||||||||||||||||||    
T  21227 attaccctttgaaggtacctaagcac 21202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 20610164 - 20610348
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||     
T  20610164 actatctctcccgtactatcaaacctattaccgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacgaggtggttgttaagcatggcccacg 20610263  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| ||||| ||||| ||||||||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  20610264 acatgaagagttcatccgtcctagtgttcctcaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaag 20610348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 18071417 - 18071230
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||| |  ||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||     
T  18071417 actatctctcccgtactatcaaacctattatcgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacgaggtggttgttaagcatggcccacg 18071318  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| ||||||||||||| ||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18071317 acatgaagagttcatccgtcctagtgttcctcaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 18071230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 20597548 - 20597732
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||     
T  20597548 actatctctcccgtactatcaaacctattaccgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacgaggtggttgttaagcatggcccacg 20597647  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| ||||| |||||  |||||||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  20597648 acatgaagagttcatccatcctagtgttcctcaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaag 20597732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 20603845 - 20604029
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||     
T  20603845 actatctctcccgtactatcaaacctattaccgtcatgggaaaggtaatcaagcaagtaaaagcatgtgttaacgaggtggttgttaagcatggcccacg 20603944  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| ||||| |||||  |||||||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  20603945 acatgaagagttcatccatcctagtgttcctcaattcggtcctaccccaaatagtgcaagtcattaccctttgaaggtacctaag 20604029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 38 - 226
Target Start/End: Complemental strand, 22946965 - 22946777
Alignment:
Q  38 tactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccac 137  Q
    |||||||||||||||||| ||| ||||||||| ||||||||  |  ||||||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  22946965 tactatctctcccttaccgtcagacctattacatacataggcgatataatcaagcaagtaatagcaagtgttcacagggtggttattaagcatagcccac 22946866  T
Q  138 aacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    || ||||| | ||||||||||||||| ||||| || ||| |||||||||| |||||||||| ||||||||||| |||||||||| ||||    
T  22946865 aatataaaaaactcatctgtcctagtcttccctaactcagtcctaccccagatggtgcaagccataacccttttaaggtacctatgcac 22946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 26846173 - 26845986
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| ||| |||| |||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||     
T  26846173 actatctctcccctactatcagacctattactgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaacggggtggttgtttagcatggcccacg 26846074  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||| ||||| ||||| || ||||| |||||||||||  || |||||||||| ||||||||||| |||||||||||||||||||||||    
T  26846073 acatgaagagttcatccgttctagtattccccaattcggtcataccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 26845986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 25117820 - 25118044
Alignment:
Q  5 tttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaa 104  Q
    |||| ||| ||| |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| |||    
T  25117820 tttcctagctatgtatgttatgataccaccaactactatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaa 25117919  T
Q  105 gtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataa 204  Q
    ||||| ||||||||||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||| |||| |||||||| || |||| |||||    
T  25117920 gtgttgacggggtggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaattcactccttccccaaatagtacaagccataa 25118019  T
Q  205 ccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||||||||| |||||    
T  25118020 ccctttgaaggtacctaagtacagg 25118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 25176911 - 25177135
Alignment:
Q  5 tttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaa 104  Q
    |||| ||| ||| |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| |||    
T  25176911 tttcctagctatgtatgttatgataccaccaactactatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaa 25177010  T
Q  105 gtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataa 204  Q
    ||||| ||||||||||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||| |||| |||||||| || |||| |||||    
T  25177011 gtgttgacggggtggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaattcactccttccccaaatagtacaagccataa 25177110  T
Q  205 ccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||||||||| |||||    
T  25177111 ccctttgaaggtacctaagtacagg 25177135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 20792492 - 20792671
Alignment:
Q  40 ctatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaa 139  Q
    ||||||||||| ||| |||| ||||||||||  ||| |||||||||||||||||| ||||| || ||||||||||||||||| |||||||| |||||| |    
T  20792492 ctatctctcccctactatcaaacctattaccatcatgggaaaggtaatcaagcaaataaaaacatgtgttaacggggtggttgttaagcatggcccacga 20792591  T
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacc 219  Q
    ||| ||||| |||||  ||||||||||||||  |||  ||||||||||||| |||| |||||| ||| ||||||||||||    
T  20792592 catgaagagttcatccttcctagtgttcccctcttcggtcctaccccaaatagtgctagtcattaccttttgaaggtacc 20792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 30764791 - 30765002
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | ||||| || |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| ||||||||||||||||    
T  30764791 tatgttatgataccaccaactacgatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 30764890  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| ||||| ||||| || ||  ||||||||||||| | |||| |||| |||| ||| ||||||| ||||||||||||||||||    
T  30764891 ggttgtgcagcatagcccataacatgaagagttcgtcgttcctagtgttccctagttcagtccttcccctaatagtgcaagccataaccctttgaaggta 30764990  T
Q  218 cctaagcacagg 229  Q
    |||||| |||||    
T  30764991 cctaagtacagg 30765002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 20439894 - 20440056
Alignment:
Q  61 acctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcct 160  Q
    ||||||| |||| || ||||||||| |||||||||||||| ||||||| |||||||||||| |  ||||||||||| | ||| ||||| |||||  ||||    
T  20439894 acctatttcctatatgggaaaggtagtcaagcaagtaaaaacaagtgtaaacggggtggttgtgcagcatagcccaaagcatgaagagttcatcgctcct 20439993  T
Q  161 agtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    | ||||||| |||||| |||| |||||||| || |||| ||||||||||||||||||||||||    
T  20439994 actgttccctaattcactccttccccaaatagtacaagccataaccctttgaaggtacctaag 20440056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 225
Target Start/End: Original strand, 23520857 - 23521042
Alignment:
Q  40 ctatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaa 139  Q
    |||||||||||||||||    ||||| ||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| |||     
T  23520857 ctatctctcccttaccagttgacctagtacctacatgggaaaggtaatcaagcaaataaaagcaagtatttacgggatggttgttaagcatagcctacag 23520956  T
Q  140 cataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    ||| ||  | ||||| ||||||||||| ||||||||  | ||||||||||| ||||||| | | || | |||||||| ||||||||    
T  23520957 catgaaaggttcatccgtcctagtgtttcccaattcggttctaccccaaatagtgcaagccgtcactcgttgaaggtgcctaagca 23521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 24954864 - 24955069
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  24954864 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 24954963  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  24954964 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 24955063  T
Q  218 cctaag 223  Q
    ||||||    
T  24955064 cctaag 24955069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 21386798 - 21386656
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctac 183  Q
    ||||||||||||||||| ||||| |||| ||||| |||| ||||||| ||||| |  || ||||||||||| ||||||||  | || |  ||  ||||||    
T  21386798 taatcaagcaagtaaaaacaagtattaatggggttgttactaagcattgcccaaagaattaagagctcatccgtcctagttgttcctacctctttcctac 21386699  T
Q  184 cccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    | |||||||| |||  ||||||||||||||| |||||||||||    
T  21386698 ctcaaatggtacaatccataaccctttgaagttacctaagcac 21386656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 22319189 - 22319276
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | |||||||||||| | |||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||    
T  22319189 aggaaaggtaatcaagtaggtaaaagcaagtatgaacggggttgttactaagcattgcccaaagcataaagagttcatccgtcctagt 22319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 18487790 - 18487860
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatc 154  Q
    ||||||||||| ||| ||||| ||||||  || ||||||| ||||||||||||||||||||| ||||||||    
T  18487790 taatcaagcaaataatagcaaatgttaataggatggttataaagcatagcccacaacataaacagctcatc 18487860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 225
Target Start/End: Original strand, 20446581 - 20446706
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagt 199  Q
    ||||| |||||||  ||||||||| |||||||||| |||||||||| |||||| | |||||  |  | || |  ||  | |||||||| ||||||||||     
T  20446581 agcaaatgttaacatggtggttataaagcatagcctacaacataaacagctcaacagtcctcatcattcctacctcttttctaccccatatggtgcaagc 20446680  T
Q  200 cataaccctttgaaggtacctaagca 225  Q
    ||||||| | ||||||||||||||||    
T  20446681 cataaccatgtgaaggtacctaagca 20446706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 21282726 - 21282775
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  21282726 ctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 21282775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 24218232 - 24218183
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  24218232 ctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 24218183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 15734042 - 15733955
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  15734042 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 15733955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 23746559 - 23746472
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  23746559 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 23746472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 25008489 - 25008576
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  25008489 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 25008576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 24938938 - 24938889
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  24938938 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagg 24938889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 24218312 - 24218252
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcct 160  Q
    ||||| |||||||  ||||||||| ||||||||||||||| ||||| |||||| | |||||    
T  24218312 agcaaatgttaacatggtggttataaagcatagcccacaatataaacagctcaacagtcct 24218252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 23847 - 23677
Alignment:
Q  56 atcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatct 155  Q
    |||| |||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||| |||| ||||| |||||     
T  23847 atcaaacctattaccgacatgggaaaggtaatcaagtaagtaaaagcatgtgttaacggggtggttgttaagcatggcccacgacatgaagagttcatcc 23748  T
Q  156 gtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    ||||||||||||||||||||  |||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  23747 gtcctagtgttccccaattcggtcctgccccaaatagtgcaagtcattaccctttgaaggtacctaagcac 23677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 19653 - 19840
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| ||||||| |||| || ||||||||| |||||||||||||||| |||||||||||||||||| |  ||||||||||    
T  19653 actactatttctcccttaccatcagacctatttcctatatgggaaaggtagtcaagcaagtaaaagcgagtgttaacggggtggttgtgcagcatagccc 19752  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    ||||||| ||||| |||||  ||||||||||||| |  ||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  19753 acaacatgaagagttcatcgctcctagtgttccctatatcagtccttccccaaatagtgcaagccataaccctttgaaggtacctaag 19840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 253453 - 253573
Alignment:
Q  1 ccaatttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaa 100  Q
    |||||||| ||| ||| ||||| |||||  ||  ||||||||| || |||||||||||| |||||||||||| || |||||| || ||||||||||||||    
T  253453 ccaatttcctagctatgtatgtgatgataccacggactactatttcccccttaccatcagacctattacctatatgggaaagatagtcaagcaagtaaaa 253552  T
Q  101 gcaagtgttaacggggtggtt 121  Q
    |||||||||||||||||||||    
T  253553 gcaagtgttaacggggtggtt 253573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 3746 - 3939
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||| ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||| |  | ||||||||    
T  3746 actactatttctcccttaccatcagacctatttcctatatgggaaaggtagtcaagcaagtaaaagcaagtgttaacggggtggttgtgcaacatagccc 3845  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    | |  || ||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| |||||||||||||||||||||||| |||||    
T  3846 atagtatgaagagttcatcactcctagtgttccctaattcagtccttccccaaatagtgcaagccataaccctttgaaggtacctaagtacagg 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 223
Target Start/End: Complemental strand, 1697 - 1513
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  1697 actatctctcccttaccgtcagacctattacctacaagggaaaggtaatcaagcaagtaaaagcaagtattaacggggtggttgttaagcatggcccaca 1598  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| || || ||||| ||||||||||| || |||||| | || |||||||| ||||||| |||||||| ||| ||||| |||||    
T  1597 acatgaacagttcatccgtcctagtgtttcctaattcagttcttccccaaatagtgcaagccataacccgttggaggtatctaag 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 26082 - 26275
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| |||||| |||||||  ||||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  26082 actactatttctcccctaccatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaagcaagtgttaacggggtggttgtgcagcatagccc 26181  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    | ||||| ||||| |||||  ||||||||||||| | |||| |||| |||||||| ||||||  |||||||||||||||||||||||| |||||    
T  26182 ataacatgaagagttcatcgctcctagtgttccctagttcagtccttccccaaatagtgcaaaccataaccctttgaaggtacctaagtacagg 26275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 22870275 - 22870088
Alignment:
Q  36 actactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagccc 135  Q
    |||||||| ||||||||||||||  ||||||| |||| || ||||||||| | ||| ||||||||||||||||||| ||||||||| |  ||||||||||    
T  22870275 actactatttctcccttaccatcggacctatttcctatatgggaaaggtagttaagtaagtaaaagcaagtgttaagggggtggttgtgcagcatagccc 22870176  T
Q  136 acaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    | | ||||||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  22870175 atagcataaagagttcatcgctcctagtgttccctaattcactccttccccaaatagtgcaagccataaccctttgaaggtacctaag 22870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 24821787 - 24821966
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||     | || |||||||    
T  24821787 actatctctcccctaccatcagacctattactgacataggaaaggtaatcaaacaagtaaaagcatgtgttaacggggtggtt-----gtatggcccaca 24821881  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| || |  |||||  |||||||||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||||    
T  24821882 acatgaaaacttcatccatcctagtgttccccaattcggtcctaccccaaatagtgcaagctattaccctttgaaggtacctaag 24821966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 115996 - 115854
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcc 180  Q
    ||||| |||||||||||||| |||||||||||||||||||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| |||||| |||    
T  115996 aggtagtcaagcaagtaaaaacaagtgttaacggggtggttgtgcagcatagcccaaagcatgaagagttcatcactcctagtgttccctaattcactcc 115897  T
Q  181 taccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  115896 taccccaaatagtgcaagccataaccctttgaaggtacctaag 115854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 16774184 - 16773979
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  16774184 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 16774085  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||||||||||||||    
T  16774084 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataaccctttgaaggta 16773985  T
Q  218 cctaag 223  Q
    ||||||    
T  16773984 cctaag 16773979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 23161062 - 23161267
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||||||| |    
T  23161062 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacgggtt 23161161  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||| |||| ||| ||||||| ||| ||||||||||||||    
T  23161162 ggttgtgcagcatagcccaaagcatgaagagttcatcgttcctagtgttccctagttctgtccttcccctaatagtgcaagccattaccctttgaaggta 23161261  T
Q  218 cctaag 223  Q
    ||||||    
T  23161262 cctaag 23161267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 23572319 - 23572524
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||||||| |    
T  23572319 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacgggtt 23572418  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||| |||| ||| ||||||| ||| ||||||||||||||    
T  23572419 ggttgtgcagcatagcccaaagcatgaagagttcatcgttcctagtgttccctagttctgtccttcccctaatagtgcaagccattaccctttgaaggta 23572518  T
Q  218 cctaag 223  Q
    ||||||    
T  23572519 cctaag 23572524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 27630034 - 27629829
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| | |||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||||||| |    
T  27630034 tatgttatgataccaccaactactatttttcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacgggtt 27629935  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||| |||| ||| ||||||| ||| ||||||||||||||    
T  27629934 ggttgtgcagcatagcccaaagcatgaagagttcatcgttcctagtgttccctagttctgtccttcccctaatagtgcaagccattaccctttgaaggta 27629835  T
Q  218 cctaag 223  Q
    ||||||    
T  27629834 cctaag 27629829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 25369250 - 25369408
Alignment:
Q  68 acctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttc 167  Q
    ||||||| ||| ||||||||||||||||||||| ||||| || ||||||| |||| ||||||| ||||| | |||||||||||||||  |||||||  |     
T  25369250 acctacagaggtaaggtaatcaagcaagtaaaaacaagtattcacggggttgttactaagcattgcccaaagcataaagagctcatccatcctagttgtt 25369349  T
Q  168 cccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    || |  ||  ||||| | |||||||| |||| |||||||||||||||||||||||||||    
T  25369350 cctacctctttcctatctcaaatggtacaagccataaccctttgaaggtacctaagcac 25369408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 24796982 - 24797187
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| ||   ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| ||| |    
T  24796982 tatgttatgataccaccaactactatttctcccctactattggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaatgggtt 24797081  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| |||||||| |||||||||    
T  24797082 ggttgtgcagcatagcccaaagcatgaagagttcatcattcctagtgttccctagttctttccgtcccctaatggtgcaagccataacccgttgaaggta 24797181  T
Q  218 cctaag 223  Q
    ||||||    
T  24797182 cctaag 24797187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 20306429 - 20306575
Alignment:
Q  77 ggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattca 176  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| |  |||||| |||| | ||| ||||| |||||  ||||||||||||| | |||     
T  20306429 ggaaatgtagtcaagcaagtaaaaacaagtgttaacggggtggttgtgcagcatatcccagagcatgaagagttcatcgttcctagtgttccctagttct 20306528  T
Q  177 atcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
     || | |  | ||| ||||||| ||||||||||||||||||||||||    
T  20306529 gtctttcttctaatagtgcaagccataaccctttgaaggtacctaag 20306575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 24169843 - 24169702
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctag-tgttcc--ccaattcaa 177  Q
    ||||||||||||||||| || ||||| || ||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||||| ||||||  || |||       
T  24169843 aggtaatcaagcaagtagaaacaagtattcacggggttgttactaagcattgcccaaagcataaagagttcatccgtcctagttgttcctacctatt--- 24169747  T
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaa 222  Q
    |||||||||||||||| |||| ||| |||||||| ||||||||||    
T  24169746 tcctaccccaaatggtacaagccatgaccctttgtaggtacctaa 24169702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 24500808 - 24500756
Alignment:
Q  100 agcaagtgttaacggggtggttattaagcatagcccacaacataaagagctca 152  Q
    ||||| ||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  24500808 agcaaatgttaatagggtggttataaagcatagcccacaacataaacagctca 24500756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 13308 - 13395
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  13308 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 13395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 22046366 - 22046453
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  22046366 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 22046453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 25356020 - 25355933
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| || ||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  25356020 aggaaaggtaatcaagtaggtagaaacaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 25355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 25372784 - 25372832
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||| ||||||| |||| ||| || ||||||||||||||||||||    
T  25372784 tcctaccctaaatggtacaagccatgactctttgaaggtacctaagcac 25372832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 43967 - 43788
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||          ||| ||||||||||| ||||||||||||||||    
T  43967 actatctctcccctaccatcagacctattacctacataggaaaggtaatcaagcaagt----------gttgacggggtggttgttaagcatagcccaca 43878  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccc-tttgaaggtacctaagcaca 227  Q
     ||| ||||| ||||| || |||||| |||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  43877 gcatgaagagttcatcagttctagtgctccccaattcaatcctaccccaaattatgcaagccataacccttttgaaggtacctaagcaca 43788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 51356 - 51177
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||          ||| ||||||||||| ||||||||||||||||    
T  51356 actatctctcccctaccatcagacctattacctacataggaaaggtaatcaagcaagt----------gttgacggggtggttgttaagcatagcccaca 51267  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccc-tttgaaggtacctaagcaca 227  Q
     ||| ||||| ||||| || |||||| |||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||    
T  51266 gcatgaagagttcatcagttctagtgctccccaattcaatcctaccccaaattatgcaagccataacccttttgaaggtacctaagcaca 51177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 121836 - 121709
Alignment:
Q  99 aagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaag 198  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||    
T  121836 aagcatgtgttaacgcggtggttgttaagcatggcccacaacatgaagagttcatccgtcctagtgttccccaattcggtcctaccccaaatagtgcaag 121737  T
Q  199 tcataaccctttgaaggtacctaagcac 226  Q
    |||| |||||||||||||||||||||||    
T  121736 tcattaccctttgaaggtacctaagcac 121709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1400 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold1400
Description:

Target: scaffold1400; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 133 - 338
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | ||||| || |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| ||||||||||||||||    
T  133 tatgttatgataccaccaactacaatttctcccctactatcggacctatttcctataagggaaaggtagtcaagcaagtaaaaacaagtgttaacggggt 232  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| ||||| ||||| |||||  ||||||||||||| | |||| |||| |||| ||| ||||||| ||||||||||||||||||    
T  233 ggttgtgcagcatagcccataacatgaagagttcatcgttcctagtgttccctagttcagtccttcccctaatagtgcaagccataaccctttgaaggta 332  T
Q  218 cctaag 223  Q
    ||||||    
T  333 cctaag 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 19949 - 20128
Alignment:
Q  39 actatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccaca 138  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||     | || | |||||    
T  19949 actatctctcccctaccatcagacctattacagacataggaaaggtaatcaaacaagtaaaagcatgtgttaacggggtggtt-----gtatggaccaca 20043  T
Q  139 acataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    |||| || |  |||||  |||||||||||||||||||  ||||||||||||| |||||||  || ||||||||||||||||||||    
T  20044 acatgaaaacttcatccatcctagtgttccccaattcggtcctaccccaaatagtgcaagctattaccctttgaaggtacctaag 20128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 29049 - 28831
Alignment:
Q  5 tttcatagttatatatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaa 104  Q
    |||| ||| ||| |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| || ||||||||| |||||||||||||| |||    
T  29049 tttcctagctatgtatgttatgataccaccaactactatttctcccctactatcggacctatttcctatatgggaaaggtagtcaagcaagtaaaaacaa 28950  T
Q  105 gtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataa 204  Q
    ||||||||||||||||| |  ||||||||||| | ||| || || |||||  ||||||||||||| |||||  |||| |||||||| || |||| |||||    
T  28949 gtgttaacggggtggttgtgcagcatagcccaaagcatgaatagttcatcactcctagtgttccctaattcgctccttccccaaatagtacaagccataa 28850  T
Q  205 ccctttgaaggtacctaag 223  Q
    ||| |||||||||||||||    
T  28849 cccgttgaaggtacctaag 28831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 24097 - 23892
Alignment:
Q  18 tatgttatgatgacaacgactactatctctcccttaccatcatacctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaacggggt 117  Q
    |||||||||||  || | |||||||| |||||| ||| |||  ||||||| |||| |  ||||||||| |||||||||||||| |||||||||| |||||    
T  24097 tatgttatgataccaccaactactatttctcccctactatcggacctatttcctagaagggaaaggtagtcaagcaagtaaaaacaagtgttaatggggt 23998  T
Q  118 ggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggta 217  Q
    |||| |  ||||||||||| | ||| ||||| |||||  ||||||||||||| | |||  |||  |||| ||||||||||| ||||||| ||||||||||    
T  23997 ggttgtgcagcatagcccaaagcatgaagagttcatcgttcctagtgttccctagttctgtccgtcccctaatggtgcaagccataaccgtttgaaggta 23898  T
Q  218 cctaag 223  Q
    ||||||    
T  23897 cctaag 23892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1756 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1756
Description:

Target: scaffold1756; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 1103 - 1000
Alignment:
Q  126 agcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    ||||||||||| ||||| ||||| |||||  ||||||||||||| |||||| |||| |||||||| ||||||| |||||||||||||||||| ||||| |    
T  1103 agcatagcccataacatgaagagttcatcgctcctagtgttccctaattcactccttccccaaatagtgcaagccataaccctttgaaggtatctaagta 1004  T
Q  226 cagg 229  Q
    ||||    
T  1003 cagg 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 7914 - 7835
Alignment:
Q  150 tcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||||||||| ||||||  |||||||| | |||||||||| ||||||||||||||||||||||| ||||||    
T  7914 tcatctgtcctagtgttcctcaattcggtcctaccctagatggtgcaagccataaccctttgaaggtacctaatcacagg 7835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 15816 - 15737
Alignment:
Q  150 tcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    ||||||||||||||||||| ||||||  |||||||| | |||||||||| ||||||||||||||||||||||| ||||||    
T  15816 tcatctgtcctagtgttcctcaattcggtcctaccctagatggtgcaagccataaccctttgaaggtacctaatcacagg 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 11033 - 10887
Alignment:
Q  80 aaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatc 179  Q
    |||||||||||| || || || ||||| || ||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||  | || | |||  ||    
T  11033 aaggtaatcaagtaaatagaaacaagtattcacggggttgttactaagcattgcccaaagcataaagagttcatccgtcctagttgttccgatttctttc 10934  T
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||||||||| |||| ||| || ||||||||||||||||||||    
T  10933 ctaccccaaatggtacaagccatgactctttgaaggtacctaagcac 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 115151 - 115001
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| | ||| |||||||| | |||||||| |||| ||||||||||||| | ||||||||| ||||| ||||||||  | || |  ||    
T  115151 aggaaaggtaatcaagtaggtagaagcaagtatgaacggggttgttactaagcatagcccaaagcataaagagttcatccgtcctagttgttcctacctc 115052  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
      | |||||||||||||| |||| ||| || ||||||||||| ||||||||    
T  115051 ttttctaccccaaatggtacaagccatgactctttgaaggtatctaagcac 115001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 119455 - 119305
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| | ||| |||||||| | |||||||| |||| ||||||||||||| | ||||||||| ||||| ||||||||  | || |  ||    
T  119455 aggaaaggtaatcaagtaggtagaagcaagtatgaacggggttgttactaagcatagcccaaagcataaagagttcatccgtcctagttgttcctacctc 119356  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
      | |||||||||||||| |||| ||| || ||||||||||| ||||||||    
T  119355 ttttctaccccaaatggtacaagccatgactctttgaaggtatctaagcac 119305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 41532 - 41388
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcc 180  Q
    ||||||||||| ||||| || ||||| || ||||||| |||| ||||||| ||||| | |||||| || |||||||| |||||  | || | |||  |||    
T  41532 aggtaatcaagtaagtagaaacaagtattcacggggttgttactaagcatcgcccaaagcataaaaagttcatctgttctagttgttcctacttctttcc 41433  T
Q  181 taccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||    
T  41432 taccccaaatggtacaagccatgaccctttgtaggtacctaagca 41388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 9932 - 9782
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| ||||| || || || || ||||||| ||||  |||||| ||||| | ||||||||| ||||| ||||||||  | || |  ||    
T  9932 aggaaaggtaatcaagtaagtataaacaggtattcacggggttgttac-aagcattgcccaaagcataaagagttcatccgtcctagttgttcctacctc 9834  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcaca 227  Q
      | |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  9833 ttttctaccccaaatggtacaagtcatagccctttgaaggtacttaagcaca 9782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 33263 - 33409
Alignment:
Q  80 aaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatc 179  Q
    |||| ||||||||||||| || ||||| || || |||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||  | || |  ||  ||    
T  33263 aaggcaatcaagcaagtagaaacaagtattcacagggttgttactaagcattgcccaaagcataaagagttcatccgtcctagttgttcctacctctttc 33362  T
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    | |||||||||||| |||| ||| || ||||||||||||||||||||    
T  33363 ccaccccaaatggtacaagccatgactctttgaaggtacctaagcac 33409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 54740 - 54596
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcc 180  Q
    ||||||||||| | ||| || ||||| || ||||||| |||| ||||||| ||||| | |||||| || ||||| || |||||  | || | |||  |||    
T  54740 aggtaatcaagtatgtagaaacaagtattcacggggttgttactaagcatcgcccaaagcataaaaagttcatccgttctagttgttcctacttctttcc 54641  T
Q  181 taccccaaatggtgcaagtcataaccctttgaaggtacctaagca 225  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||    
T  54640 taccccaaatggtacaagccatgaccctttgtaggtacctaagca 54596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 32538 - 32621
Alignment:
Q  80 aaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||| | ||| |||||||| |||||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||    
T  32538 aaggtaatcaagtaggtagaagcaagtattaacggggttgttactaagcattgcccaaagcataaagagttcatccgtcctagt 32621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 37551 - 37500
Alignment:
Q  61 acctattacctacataggaaaggtaatcaagcaagtaaaagcaagtgttaac 112  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  37551 acctattaccgacatgggaaaggtaatcaagcaagtaaaagcatgtgttaac 37500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 18319 - 18249
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatc 154  Q
    ||||||||||| ||| ||||| ||||||  || ||||||| ||||||||||||||||||||| ||||||||    
T  18319 taatcaagcaaataatagcaaatgttaataggatggttataaagcatagcccacaacataaacagctcatc 18249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 4862 - 4947
Alignment:
Q  78 gaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||| | ||| |||||||| | |||||||| |||| ||||||| ||||| | ||||||||| ||||| ||||||||    
T  4862 gaaaggtaatcaagtaggtagaagcaagtatgaacggggttgttactaagcattgcccaaagcataaagagttcatccgtcctagt 4947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 50475 - 50562
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagt 163  Q
    |||||||||||||||| | ||| |||||||| |||||||| | |||| ||||||| ||||| | |||||| || ||||| ||||||||    
T  50475 aggaaaggtaatcaagtaggtagaagcaagtattaacgggattgttactaagcattgcccaaagcataaaaagttcatccgtcctagt 50562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 195735 - 195814
Alignment:
Q  144 aagagctcatctgtcctagtgttccccaattcaatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    ||||| |||||  ||||||||||||| | |||| |||| |||| ||| ||||||| ||||||||| ||||||||||||||    
T  195735 aagagttcatcgttcctagtgttccctagttcagtccttcccctaatagtgcaagccataaccctctgaaggtacctaag 195814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 12546 - 12396
Alignment:
Q  76 aggaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattc 175  Q
    |||||||||||||||| | ||  |||||||| |||||||| | |||| |||  || ||||| | ||||||||| ||||||||||||||  | || |  ||    
T  12546 aggaaaggtaatcaagtaggtggaagcaagtattaacgggattgttactaacaattgcccaaagcataaagagttcatctgtcctagttgttcctacctc 12447  T
Q  176 aatcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
      | |||||||||||||| |||| ||| || ||||| ||||| ||||||||    
T  12446 ttttctaccccaaatggtacaagccatgactctttggaggtatctaagcac 12396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 11632 - 11693
Alignment:
Q  99 aagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcct 160  Q
    |||||| ||||||| |||||||||| |||||||||||||||||| || || ||||| |||||    
T  11632 aagcaaatgttaacagggtggttataaagcatagcccacaacattaacagttcatcagtcct 11693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 12130 - 12179
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  12130 ctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 12179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 226
Target Start/End: Original strand, 39445 - 39590
Alignment:
Q  81 aggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaatcc 180  Q
    ||||||||||| ||||| || ||||| || ||||||| || | ||||||| ||||| | |||||| || ||||| ||| ||||  | || |  ||  |||    
T  39445 aggtaatcaagtaagtagaaacaagtattcacggggttgtcactaagcattgcccaaagcataaaaagttcatccgtcttagttgttcctacctctttcc 39544  T
Q  181 taccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    ||||||||||||| |||| ||| | |||||| ||||||||||||||    
T  39545 taccccaaatggtacaagccatgatcctttgtaggtacctaagcac 39590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 13260 - 13309
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  13260 ctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagg 13309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 9151 - 9200
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  9151 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagg 9200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 1099 - 1029
Alignment:
Q  84 taatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatc 154  Q
    ||||||||||| ||| || || ||||||  || ||||||| |||||||||||| |||||||| ||||||||    
T  1099 taatcaagcaaataatagaaaatgttaataggatggttataaagcatagcccataacataaacagctcatc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 14888 - 14937
Alignment:
Q  180 ctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcacagg 229  Q
    |||||||| ||||||||||  |||||| | ||||||||||||||||||||    
T  14888 ctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagg 14937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 7187 - 7332
Alignment:
Q  78 gaaaggtaatcaagcaagtaaaagcaagtgttaacggggtggttattaagcatagcccacaacataaagagctcatctgtcctagtgttccccaattcaa 177  Q
    ||||| |||| |||||||||||| || ||||| || | | | || ||||||||||||||||||||||| | |||||| |  |||||    |||| ||       
T  7187 gaaagataattaagcaagtaaaaacaggtgttcacagagagattgttaagcatagcccacaacataaacaactcatccgctctagtcggtcccactttcg 7286  T
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaag 223  Q
    ||||||||||||||||||| | |||||  ||||||| ||| |||||    
T  7287 tcctaccccaaatggtgcatgccataaaactttgaatgtatctaag 7332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 15824 - 15872
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||||||||||| |||| ||| |||| ||| ||||||||||||||    
T  15824 tcctaccccaaatggtacaagccatgacccgttgtaggtacctaagcac 15872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 24659 - 24707
Alignment:
Q  178 tcctaccccaaatggtgcaagtcataaccctttgaaggtacctaagcac 226  Q
    |||||||||||||||| |||| ||| |||| ||| ||||||||||||||    
T  24659 tcctaccccaaatggtacaagccatgacccgttgtaggtacctaagcac 24707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University